BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 0bab414015303382d116d0ee2b5c8755.TrEMBL.fasta
14 sequences; 3,649 total letters
Query= ACIAD0560
Length=261
Score E
Sequences producing significant alignments: (Bits) Value
A0A7G2SCA5 DUF4115 domain-containing protein [Acinetobacter sp] 504 0.0
Q6FEM4 Cytoskeleton protein RodZ-like C-terminal domain-containin... 504 0.0
A0A427M2A0 Helix-turn-helix domain-containing protein [Acinetobac... 455 5e-168
A0A0M1I6N0 DNA-binding protein [Acinetobacter sp. C15] 455 5e-168
N9BYM8 Cytoskeleton protein RodZ-like C-terminal domain-containin... 453 3e-167
A0A1P8EMC1 Helix-turn-helix domain-containing protein [Acinetobac... 453 3e-167
A0A3G9FX35 DUF4115 domain-containing protein [Acinetobacter ursin... 423 2e-155
A0A427PTS4 Helix-turn-helix domain-containing protein [Acinetobac... 423 2e-155
N9DCC4 Cytoskeleton protein RodZ-like C-terminal domain-containin... 422 6e-155
A0A009Z8N9 Helix-turn-helix domain protein [Acinetobacter sp. 479... 421 2e-154
A0A3A8EZD2 Helix-turn-helix domain-containing protein [Acinetobac... 421 3e-154
L9LUJ1 DNA-binding helix-turn-helix protein [Acinetobacter sp. OI... 412 4e-151
A0A0A7XNU5 Cytoskeletal protein RodZ [Acinetobacter nosocomialis] 412 4e-151
A0A5N7U043 DUF4115 domain-containing protein [Acinetobacter sp] 412 6e-151
>A0A7G2SCA5 DUF4115 domain-containing protein [Acinetobacter sp]
Length=260
Score = 504 bits (1298), Expect = 0.0
Identities = 260/260 (100%), Positives = 260/260 (100%), Gaps = 0/260 (0%)
Query 1 MEINPNSQQPTGSSLPTSALGNVQRPGEYLRQIRIAKKLELESVAADLKMPVKTLTALEN 60
MEINPNSQQPTGSSLPTSALGNVQRPGEYLRQIRIAKKLELESVAADLKMPVKTLTALEN
Sbjct 1 MEINPNSQQPTGSSLPTSALGNVQRPGEYLRQIRIAKKLELESVAADLKMPVKTLTALEN 60
Query 61 DDYKALPEATFIKGYYRSYAKYLSADASVITQRFDEIYANDTGLLPNHALTNSPIKIMGK 120
DDYKALPEATFIKGYYRSYAKYLSADASVITQRFDEIYANDTGLLPNHALTNSPIKIMGK
Sbjct 61 DDYKALPEATFIKGYYRSYAKYLSADASVITQRFDEIYANDTGLLPNHALTNSPIKIMGK 120
Query 121 LPGSNSERNRKWLKRGVLIVLAIALIALVVTVIQNWSNKKSGATAPAASNVEVLPLNSAS 180
LPGSNSERNRKWLKRGVLIVLAIALIALVVTVIQNWSNKKSGATAPAASNVEVLPLNSAS
Sbjct 121 LPGSNSERNRKWLKRGVLIVLAIALIALVVTVIQNWSNKKSGATAPAASNVEVLPLNSAS 180
Query 181 STSGDHLVLNFTHPTSVHIVDSTGKVLATGRQASTLELTGQSPFQIRLDDATAVSLSLNQ 240
STSGDHLVLNFTHPTSVHIVDSTGKVLATGRQASTLELTGQSPFQIRLDDATAVSLSLNQ
Sbjct 181 STSGDHLVLNFTHPTSVHIVDSTGKVLATGRQASTLELTGQSPFQIRLDDATAVSLSLNQ 240
Query 241 EQISLSPYTVNGKAEFRLSR 260
EQISLSPYTVNGKAEFRLSR
Sbjct 241 EQISLSPYTVNGKAEFRLSR 260
>Q6FEM4 Cytoskeleton protein RodZ-like C-terminal domain-containing
protein [Acinetobacter baylyi (strain ATCC 33305 / BD413
/ ADP1)]
Length=260
Score = 504 bits (1298), Expect = 0.0
Identities = 260/260 (100%), Positives = 260/260 (100%), Gaps = 0/260 (0%)
Query 1 MEINPNSQQPTGSSLPTSALGNVQRPGEYLRQIRIAKKLELESVAADLKMPVKTLTALEN 60
MEINPNSQQPTGSSLPTSALGNVQRPGEYLRQIRIAKKLELESVAADLKMPVKTLTALEN
Sbjct 1 MEINPNSQQPTGSSLPTSALGNVQRPGEYLRQIRIAKKLELESVAADLKMPVKTLTALEN 60
Query 61 DDYKALPEATFIKGYYRSYAKYLSADASVITQRFDEIYANDTGLLPNHALTNSPIKIMGK 120
DDYKALPEATFIKGYYRSYAKYLSADASVITQRFDEIYANDTGLLPNHALTNSPIKIMGK
Sbjct 61 DDYKALPEATFIKGYYRSYAKYLSADASVITQRFDEIYANDTGLLPNHALTNSPIKIMGK 120
Query 121 LPGSNSERNRKWLKRGVLIVLAIALIALVVTVIQNWSNKKSGATAPAASNVEVLPLNSAS 180
LPGSNSERNRKWLKRGVLIVLAIALIALVVTVIQNWSNKKSGATAPAASNVEVLPLNSAS
Sbjct 121 LPGSNSERNRKWLKRGVLIVLAIALIALVVTVIQNWSNKKSGATAPAASNVEVLPLNSAS 180
Query 181 STSGDHLVLNFTHPTSVHIVDSTGKVLATGRQASTLELTGQSPFQIRLDDATAVSLSLNQ 240
STSGDHLVLNFTHPTSVHIVDSTGKVLATGRQASTLELTGQSPFQIRLDDATAVSLSLNQ
Sbjct 181 STSGDHLVLNFTHPTSVHIVDSTGKVLATGRQASTLELTGQSPFQIRLDDATAVSLSLNQ 240
Query 241 EQISLSPYTVNGKAEFRLSR 260
EQISLSPYTVNGKAEFRLSR
Sbjct 241 EQISLSPYTVNGKAEFRLSR 260
>A0A427M2A0 Helix-turn-helix domain-containing protein [Acinetobacter
soli]
Length=260
Score = 455 bits (1171), Expect = 5e-168
Identities = 229/260 (88%), Positives = 244/260 (94%), Gaps = 0/260 (0%)
Query 1 MEINPNSQQPTGSSLPTSALGNVQRPGEYLRQIRIAKKLELESVAADLKMPVKTLTALEN 60
MEINPNSQQPTGSSLPTSALGNVQRPGEYLRQIRIAKKLELE VA LKMPVKTLTALE+
Sbjct 1 MEINPNSQQPTGSSLPTSALGNVQRPGEYLRQIRIAKKLELEHVADALKMPVKTLTALES 60
Query 61 DDYKALPEATFIKGYYRSYAKYLSADASVITQRFDEIYANDTGLLPNHALTNSPIKIMGK 120
DDYK LPEATFIKGYYRSYAKYL+ADAS+I QRFDEIYANDTGLLPNHALTNSPIKIMGK
Sbjct 61 DDYKVLPEATFIKGYYRSYAKYLNADASIIIQRFDEIYANDTGLLPNHALTNSPIKIMGK 120
Query 121 LPGSNSERNRKWLKRGVLIVLAIALIALVVTVIQNWSNKKSGATAPAASNVEVLPLNSAS 180
LPGSNSERNRKWLKR VLIVL + ++ L+ T IQNWSNKK+ ATAPAASNVE+LP+ +AS
Sbjct 121 LPGSNSERNRKWLKRSVLIVLVLVILGLIFTAIQNWSNKKNDATAPAASNVEILPMGNAS 180
Query 181 STSGDHLVLNFTHPTSVHIVDSTGKVLATGRQASTLELTGQSPFQIRLDDATAVSLSLNQ 240
+ SGD LVLNFT PTS+HIVDSTGKVLATGRQASTLEL+GQSPFQIRLDDA+AVSLSLNQ
Sbjct 181 AASGDQLVLNFTRPTSIHIVDSTGKVLATGRQASTLELSGQSPFQIRLDDASAVSLSLNQ 240
Query 241 EQISLSPYTVNGKAEFRLSR 260
EQISLSPYTVNGKAEFRLSR
Sbjct 241 EQISLSPYTVNGKAEFRLSR 260
>A0A0M1I6N0 DNA-binding protein [Acinetobacter sp. C15]
Length=260
Score = 455 bits (1171), Expect = 5e-168
Identities = 229/260 (88%), Positives = 244/260 (94%), Gaps = 0/260 (0%)
Query 1 MEINPNSQQPTGSSLPTSALGNVQRPGEYLRQIRIAKKLELESVAADLKMPVKTLTALEN 60
MEINPNSQQPTGSSLPTSALGNVQRPGEYLRQIRIAKKLELE VA LKMPVKTLTALEN
Sbjct 1 MEINPNSQQPTGSSLPTSALGNVQRPGEYLRQIRIAKKLELEHVADALKMPVKTLTALEN 60
Query 61 DDYKALPEATFIKGYYRSYAKYLSADASVITQRFDEIYANDTGLLPNHALTNSPIKIMGK 120
DDYK LPEATFIKGYYRSYAKYL+ADAS+I QRFDEIYANDTGLLPNHALTNSPIKIMGK
Sbjct 61 DDYKVLPEATFIKGYYRSYAKYLNADASIIIQRFDEIYANDTGLLPNHALTNSPIKIMGK 120
Query 121 LPGSNSERNRKWLKRGVLIVLAIALIALVVTVIQNWSNKKSGATAPAASNVEVLPLNSAS 180
LPGSNSERNRKWLKR VLIVL + ++ L+ T IQNWS+KK+ ATAPAASNVE+LP+ +AS
Sbjct 121 LPGSNSERNRKWLKRSVLIVLVLVILGLIFTAIQNWSSKKNDATAPAASNVEILPMGNAS 180
Query 181 STSGDHLVLNFTHPTSVHIVDSTGKVLATGRQASTLELTGQSPFQIRLDDATAVSLSLNQ 240
+ SGD LVLNFT PTS+HIVDSTGKVLATGRQASTLEL+GQSPFQIRLDDA+AVSLSLNQ
Sbjct 181 AASGDQLVLNFTRPTSIHIVDSTGKVLATGRQASTLELSGQSPFQIRLDDASAVSLSLNQ 240
Query 241 EQISLSPYTVNGKAEFRLSR 260
EQISLSPYTVNGKAEFRLSR
Sbjct 241 EQISLSPYTVNGKAEFRLSR 260
>N9BYM8 Cytoskeleton protein RodZ-like C-terminal domain-containing
protein [Acinetobacter soli NIPH 2899]
Length=260
Score = 453 bits (1166), Expect = 3e-167
Identities = 228/260 (88%), Positives = 244/260 (94%), Gaps = 0/260 (0%)
Query 1 MEINPNSQQPTGSSLPTSALGNVQRPGEYLRQIRIAKKLELESVAADLKMPVKTLTALEN 60
MEINPNSQQPTGSSLPTSALGNVQRPGEYLRQIRIAKKLELE VA LKMPVKTLTALE+
Sbjct 1 MEINPNSQQPTGSSLPTSALGNVQRPGEYLRQIRIAKKLELEHVADALKMPVKTLTALES 60
Query 61 DDYKALPEATFIKGYYRSYAKYLSADASVITQRFDEIYANDTGLLPNHALTNSPIKIMGK 120
DDYK LPEATFIKGYYRSYAKYL+ADAS+I QRFDEIYANDTGLLPNHALTNSPIKIMGK
Sbjct 61 DDYKVLPEATFIKGYYRSYAKYLNADASIIIQRFDEIYANDTGLLPNHALTNSPIKIMGK 120
Query 121 LPGSNSERNRKWLKRGVLIVLAIALIALVVTVIQNWSNKKSGATAPAASNVEVLPLNSAS 180
LPGSNSERNRKWLKR VLIVL + ++ L+ T IQNWS+KK+ ATAPAASNVE+LP+ +AS
Sbjct 121 LPGSNSERNRKWLKRSVLIVLVLVILGLIFTAIQNWSSKKNDATAPAASNVEILPMGNAS 180
Query 181 STSGDHLVLNFTHPTSVHIVDSTGKVLATGRQASTLELTGQSPFQIRLDDATAVSLSLNQ 240
+ SGD LVLNFT PTS+HIVDSTGKVLATGRQASTLEL+GQSPFQIRLDDA+AVSLSLNQ
Sbjct 181 AASGDQLVLNFTRPTSIHIVDSTGKVLATGRQASTLELSGQSPFQIRLDDASAVSLSLNQ 240
Query 241 EQISLSPYTVNGKAEFRLSR 260
EQISLSPYTVNGKAEFRLSR
Sbjct 241 EQISLSPYTVNGKAEFRLSR 260
>A0A1P8EMC1 Helix-turn-helix domain-containing protein [Acinetobacter
soli]
Length=260
Score = 453 bits (1166), Expect = 3e-167
Identities = 228/260 (88%), Positives = 244/260 (94%), Gaps = 0/260 (0%)
Query 1 MEINPNSQQPTGSSLPTSALGNVQRPGEYLRQIRIAKKLELESVAADLKMPVKTLTALEN 60
MEINPNSQQPTGSSLPTSALGNVQRPGEYLRQIRIAKKLELE VA LKMPVKTLTALE+
Sbjct 1 MEINPNSQQPTGSSLPTSALGNVQRPGEYLRQIRIAKKLELEHVADALKMPVKTLTALES 60
Query 61 DDYKALPEATFIKGYYRSYAKYLSADASVITQRFDEIYANDTGLLPNHALTNSPIKIMGK 120
DDYK LPEATFIKGYYRSYAKYL+ADAS+I QRFDEIYANDTGLLPNHALTNSPIKIMGK
Sbjct 61 DDYKVLPEATFIKGYYRSYAKYLNADASIIIQRFDEIYANDTGLLPNHALTNSPIKIMGK 120
Query 121 LPGSNSERNRKWLKRGVLIVLAIALIALVVTVIQNWSNKKSGATAPAASNVEVLPLNSAS 180
LPGSNSERNRKWLKR VLIVL + ++ L+ T IQNWS+KK+ ATAPAASNVE+LP+ +AS
Sbjct 121 LPGSNSERNRKWLKRSVLIVLVLVILGLIFTAIQNWSSKKNDATAPAASNVEILPMGNAS 180
Query 181 STSGDHLVLNFTHPTSVHIVDSTGKVLATGRQASTLELTGQSPFQIRLDDATAVSLSLNQ 240
+ SGD LVLNFT PTS+HIVDSTGKVLATGRQASTLEL+GQSPFQIRLDDA+AVSLSLNQ
Sbjct 181 AASGDQLVLNFTRPTSIHIVDSTGKVLATGRQASTLELSGQSPFQIRLDDASAVSLSLNQ 240
Query 241 EQISLSPYTVNGKAEFRLSR 260
EQISLSPYTVNGKAEFRLSR
Sbjct 241 EQISLSPYTVNGKAEFRLSR 260
>A0A3G9FX35 DUF4115 domain-containing protein [Acinetobacter ursingii]
Length=260
Score = 423 bits (1088), Expect = 2e-155
Identities = 209/260 (80%), Positives = 232/260 (89%), Gaps = 0/260 (0%)
Query 1 MEINPNSQQPTGSSLPTSALGNVQRPGEYLRQIRIAKKLELESVAADLKMPVKTLTALEN 60
MEINPNSQQPTGSS PTSALGNVQRPGEYLRQIR+A+KLEL VA+DL MP+KTLTALE
Sbjct 1 MEINPNSQQPTGSSSPTSALGNVQRPGEYLRQIRLAQKLELNDVASDLNMPLKTLTALEQ 60
Query 61 DDYKALPEATFIKGYYRSYAKYLSADASVITQRFDEIYANDTGLLPNHALTNSPIKIMGK 120
DDYK+LPE FIKGYYRSYAKYL DA+ I QRFDEIYANDTGLLPNHALTNSPIKIMGK
Sbjct 61 DDYKSLPEPAFIKGYYRSYAKYLKTDATAIIQRFDEIYANDTGLLPNHALTNSPIKIMGK 120
Query 121 LPGSNSERNRKWLKRGVLIVLAIALIALVVTVIQNWSNKKSGATAPAASNVEVLPLNSAS 180
LPGS S+RNRKWLKR ++++LA+ +I ++VT++QNWS KK+ AP SNVEVLPLN+ +
Sbjct 121 LPGSKSDRNRKWLKRSLILILALIVIGVIVTMLQNWSAKKTNTVAPQNSNVEVLPLNNGA 180
Query 181 STSGDHLVLNFTHPTSVHIVDSTGKVLATGRQASTLELTGQSPFQIRLDDATAVSLSLNQ 240
+TSGD LVLNF PTS+HIVDSTGKVLATGRQASTL L GQSPFQIRLDDATAVSLSLNQ
Sbjct 181 ATSGDELVLNFNRPTSIHIVDSTGKVLATGRQASTLTLNGQSPFQIRLDDATAVSLSLNQ 240
Query 241 EQISLSPYTVNGKAEFRLSR 260
E ISLSPYTVNGKA+FRLSR
Sbjct 241 EPISLSPYTVNGKADFRLSR 260
>A0A427PTS4 Helix-turn-helix domain-containing protein [Acinetobacter
sp. FDAARGOS_515]
Length=260
Score = 423 bits (1088), Expect = 2e-155
Identities = 209/260 (80%), Positives = 232/260 (89%), Gaps = 0/260 (0%)
Query 1 MEINPNSQQPTGSSLPTSALGNVQRPGEYLRQIRIAKKLELESVAADLKMPVKTLTALEN 60
MEINPNSQQPTGSS PTSALGNVQRPGEYLRQIR+A+KLEL VA+DL MP+KTLTALE
Sbjct 1 MEINPNSQQPTGSSSPTSALGNVQRPGEYLRQIRLAQKLELNDVASDLNMPLKTLTALEQ 60
Query 61 DDYKALPEATFIKGYYRSYAKYLSADASVITQRFDEIYANDTGLLPNHALTNSPIKIMGK 120
DDYK+LPE FIKGYYRSYAKYL DA+ I QRFDEIYANDTGLLPNHALTNSPIKIMGK
Sbjct 61 DDYKSLPEPAFIKGYYRSYAKYLKTDATAIIQRFDEIYANDTGLLPNHALTNSPIKIMGK 120
Query 121 LPGSNSERNRKWLKRGVLIVLAIALIALVVTVIQNWSNKKSGATAPAASNVEVLPLNSAS 180
LPGS S+RNRKWLKR ++++LA+ +I ++VT++QNWS KK+ AP SNVEVLPLN+ +
Sbjct 121 LPGSKSDRNRKWLKRSLILILALIVIGVIVTMLQNWSAKKTNTVAPQNSNVEVLPLNNGA 180
Query 181 STSGDHLVLNFTHPTSVHIVDSTGKVLATGRQASTLELTGQSPFQIRLDDATAVSLSLNQ 240
+TSGD LVLNF PTS+HIVDSTGKVLATGRQASTL L GQSPFQIRLDDATAVSLSLNQ
Sbjct 181 ATSGDELVLNFNRPTSIHIVDSTGKVLATGRQASTLTLNGQSPFQIRLDDATAVSLSLNQ 240
Query 241 EQISLSPYTVNGKAEFRLSR 260
E ISLSPYTVNGKA+FRLSR
Sbjct 241 EPISLSPYTVNGKADFRLSR 260
>N9DCC4 Cytoskeleton protein RodZ-like C-terminal domain-containing
protein [Acinetobacter ursingii ANC 3649]
Length=260
Score = 422 bits (1085), Expect = 6e-155
Identities = 209/260 (80%), Positives = 231/260 (89%), Gaps = 0/260 (0%)
Query 1 MEINPNSQQPTGSSLPTSALGNVQRPGEYLRQIRIAKKLELESVAADLKMPVKTLTALEN 60
MEINPNSQQPTGSS PTSALGNVQRPGEYLRQIR+A+KLEL VA+DL MP KTLTALE
Sbjct 1 MEINPNSQQPTGSSSPTSALGNVQRPGEYLRQIRLAQKLELNEVASDLNMPPKTLTALEQ 60
Query 61 DDYKALPEATFIKGYYRSYAKYLSADASVITQRFDEIYANDTGLLPNHALTNSPIKIMGK 120
DDYK+LPE FIKGYYRSYAKYL DA+ I QRFDEIYANDTGLLPNHALTNSPIKIMGK
Sbjct 61 DDYKSLPEPAFIKGYYRSYAKYLKTDATAIIQRFDEIYANDTGLLPNHALTNSPIKIMGK 120
Query 121 LPGSNSERNRKWLKRGVLIVLAIALIALVVTVIQNWSNKKSGATAPAASNVEVLPLNSAS 180
LPGS S+RNRKWLKR ++++LA+ +I ++VT++QNWS KK+ AP SNVEVLPLN+ +
Sbjct 121 LPGSKSDRNRKWLKRSLILILALIVIGVIVTMLQNWSAKKTNTVAPQNSNVEVLPLNNGA 180
Query 181 STSGDHLVLNFTHPTSVHIVDSTGKVLATGRQASTLELTGQSPFQIRLDDATAVSLSLNQ 240
+TSGD LVLNF PTS+HIVDSTGKVLATGRQASTL L GQSPFQIRLDDATAVSLSLNQ
Sbjct 181 ATSGDELVLNFNRPTSIHIVDSTGKVLATGRQASTLTLNGQSPFQIRLDDATAVSLSLNQ 240
Query 241 EQISLSPYTVNGKAEFRLSR 260
E ISLSPYTVNGKA+FRLSR
Sbjct 241 EPISLSPYTVNGKADFRLSR 260
>A0A009Z8N9 Helix-turn-helix domain protein [Acinetobacter sp.
479375]
Length=260
Score = 421 bits (1082), Expect = 2e-154
Identities = 208/260 (80%), Positives = 231/260 (89%), Gaps = 0/260 (0%)
Query 1 MEINPNSQQPTGSSLPTSALGNVQRPGEYLRQIRIAKKLELESVAADLKMPVKTLTALEN 60
MEINPNSQQPTGSS PTSALGNVQRPGEYLRQIR+A+KLEL VA+DL MP+K LTALE
Sbjct 1 MEINPNSQQPTGSSSPTSALGNVQRPGEYLRQIRLAQKLELNDVASDLNMPLKALTALEQ 60
Query 61 DDYKALPEATFIKGYYRSYAKYLSADASVITQRFDEIYANDTGLLPNHALTNSPIKIMGK 120
DDYK+LPE FIKGYYRSYAKYL DA+ I QRFDEIYANDTGLLPNHALTNSPIKIMGK
Sbjct 61 DDYKSLPEPAFIKGYYRSYAKYLKTDATAIIQRFDEIYANDTGLLPNHALTNSPIKIMGK 120
Query 121 LPGSNSERNRKWLKRGVLIVLAIALIALVVTVIQNWSNKKSGATAPAASNVEVLPLNSAS 180
LPGS S+RNRKWLKR ++++LA+ +I ++VT++QNWS KK+ AP SNVEVLPLN+ +
Sbjct 121 LPGSKSDRNRKWLKRSLILILALIVIGVIVTMLQNWSAKKTNMVAPQNSNVEVLPLNNGA 180
Query 181 STSGDHLVLNFTHPTSVHIVDSTGKVLATGRQASTLELTGQSPFQIRLDDATAVSLSLNQ 240
+TSGD LVLNF PTS+HIVDSTGKVLATGRQASTL L GQSPFQIRLDDATAVSLSLNQ
Sbjct 181 ATSGDELVLNFNRPTSIHIVDSTGKVLATGRQASTLTLNGQSPFQIRLDDATAVSLSLNQ 240
Query 241 EQISLSPYTVNGKAEFRLSR 260
E ISLSPYTVNGKA+FRLSR
Sbjct 241 EPISLSPYTVNGKADFRLSR 260
>A0A3A8EZD2 Helix-turn-helix domain-containing protein [Acinetobacter
guerrae]
Length=260
Score = 421 bits (1081), Expect = 3e-154
Identities = 207/260 (80%), Positives = 231/260 (89%), Gaps = 0/260 (0%)
Query 1 MEINPNSQQPTGSSLPTSALGNVQRPGEYLRQIRIAKKLELESVAADLKMPVKTLTALEN 60
MEINPNSQQPTGSS PTSALGNVQRPGEYLRQIR+A+KLEL VA+DL MP KTLTALE
Sbjct 1 MEINPNSQQPTGSSSPTSALGNVQRPGEYLRQIRLAQKLELNDVASDLNMPPKTLTALEQ 60
Query 61 DDYKALPEATFIKGYYRSYAKYLSADASVITQRFDEIYANDTGLLPNHALTNSPIKIMGK 120
DDYK+LPE FIKGYYRSYAKYL DA+ I QRFDEIYANDTGLLPNHALTNSPIKIMGK
Sbjct 61 DDYKSLPEPAFIKGYYRSYAKYLKTDATAIIQRFDEIYANDTGLLPNHALTNSPIKIMGK 120
Query 121 LPGSNSERNRKWLKRGVLIVLAIALIALVVTVIQNWSNKKSGATAPAASNVEVLPLNSAS 180
LPGS S+RNRKWLKR ++++LA+ +I ++VT++QNWS KK+ AP +S+VEVLPLN+ +
Sbjct 121 LPGSKSDRNRKWLKRSLILILALIVIGIIVTMVQNWSTKKNNTVAPQSSSVEVLPLNTGA 180
Query 181 STSGDHLVLNFTHPTSVHIVDSTGKVLATGRQASTLELTGQSPFQIRLDDATAVSLSLNQ 240
+TSGD LVLNF PTSVHIVDSTGKVLATGRQAST+ L GQSPFQIRLDDA AVSLSLNQ
Sbjct 181 ATSGDELVLNFNRPTSVHIVDSTGKVLATGRQASTITLNGQSPFQIRLDDAAAVSLSLNQ 240
Query 241 EQISLSPYTVNGKAEFRLSR 260
E ISLSPYTVNGKA+FRLSR
Sbjct 241 EPISLSPYTVNGKADFRLSR 260
>L9LUJ1 DNA-binding helix-turn-helix protein [Acinetobacter sp.
OIFC021]
Length=263
Score = 412 bits (1060), Expect = 4e-151
Identities = 208/263 (79%), Positives = 235/263 (89%), Gaps = 3/263 (1%)
Query 1 MEINPNSQQPTGSSLPTSALGNVQRPGEYLRQIRIAKKLELESVAADLKMPVKTLTALEN 60
MEINPNSQQPTGSSLPTSALGN+QRPGEYLRQIR+++K ELE V++DL MP+KTL+ALE
Sbjct 1 MEINPNSQQPTGSSLPTSALGNIQRPGEYLRQIRVSQKKELEQVSSDLNMPLKTLSALEQ 60
Query 61 DDYKALPEATFIKGYYRSYAKYLSADASVITQRFDEIYANDTGLLPNHALTNSPIKIMGK 120
DDYK+LPEATFIKGYYRSYAKYL+ADA+ I QRFDEIYANDTGLLPNHAL NSPIKIMGK
Sbjct 61 DDYKSLPEATFIKGYYRSYAKYLNADATAIIQRFDEIYANDTGLLPNHALNNSPIKIMGK 120
Query 121 LPGSNSERNRKWLKRGVLIVLAIALIALVVTVIQNWSNKKSGATAPAA--SNVEVLPL-N 177
LPGSNS+RN+KWLKR +L +L IA+++L+V +Q W++ K A P A SNVEVLP+
Sbjct 121 LPGSNSDRNKKWLKRALLAILIIAVVSLIVMGVQKWTSNKEEADVPKANQSNVEVLPMKG 180
Query 178 SASSTSGDHLVLNFTHPTSVHIVDSTGKVLATGRQASTLELTGQSPFQIRLDDATAVSLS 237
SAS+T+GD LVLNF PTSVHIVD+TGKVLATGRQASTL L G+SPFQIRLDDATAVSLS
Sbjct 181 SASATAGDQLVLNFNRPTSVHIVDATGKVLATGRQASTLTLNGESPFQIRLDDATAVSLS 240
Query 238 LNQEQISLSPYTVNGKAEFRLSR 260
LNQEQISLSPYTVNGKAEFRLSR
Sbjct 241 LNQEQISLSPYTVNGKAEFRLSR 263
>A0A0A7XNU5 Cytoskeletal protein RodZ [Acinetobacter nosocomialis]
Length=263
Score = 412 bits (1060), Expect = 4e-151
Identities = 208/263 (79%), Positives = 235/263 (89%), Gaps = 3/263 (1%)
Query 1 MEINPNSQQPTGSSLPTSALGNVQRPGEYLRQIRIAKKLELESVAADLKMPVKTLTALEN 60
MEINPNSQQPTGSSLPTSALGN+QRPGEYLRQIR+++K ELE V++DL MP+KTL+ALE
Sbjct 1 MEINPNSQQPTGSSLPTSALGNIQRPGEYLRQIRVSQKKELEQVSSDLNMPLKTLSALEQ 60
Query 61 DDYKALPEATFIKGYYRSYAKYLSADASVITQRFDEIYANDTGLLPNHALTNSPIKIMGK 120
DDYK+LPEATFIKGYYRSYAKYL+ADA+ I QRFDEIYANDTGLLPNHAL NSPIKIMGK
Sbjct 61 DDYKSLPEATFIKGYYRSYAKYLNADATAIIQRFDEIYANDTGLLPNHALNNSPIKIMGK 120
Query 121 LPGSNSERNRKWLKRGVLIVLAIALIALVVTVIQNWSNKKSGATAPAA--SNVEVLPL-N 177
LPGSNS+RN+KWLKR +L +L IA+++L+V +Q W++ K A P A SNVEVLP+
Sbjct 121 LPGSNSDRNKKWLKRALLAILIIAVVSLIVMGVQKWTSNKEEADVPKANQSNVEVLPMKG 180
Query 178 SASSTSGDHLVLNFTHPTSVHIVDSTGKVLATGRQASTLELTGQSPFQIRLDDATAVSLS 237
SAS+T+GD LVLNF PTSVHIVD+TGKVLATGRQASTL L G+SPFQIRLDDATAVSLS
Sbjct 181 SASATAGDQLVLNFNRPTSVHIVDATGKVLATGRQASTLTLNGESPFQIRLDDATAVSLS 240
Query 238 LNQEQISLSPYTVNGKAEFRLSR 260
LNQEQISLSPYTVNGKAEFRLSR
Sbjct 241 LNQEQISLSPYTVNGKAEFRLSR 263
>A0A5N7U043 DUF4115 domain-containing protein [Acinetobacter sp]
Length=263
Score = 412 bits (1059), Expect = 6e-151
Identities = 207/263 (79%), Positives = 235/263 (89%), Gaps = 3/263 (1%)
Query 1 MEINPNSQQPTGSSLPTSALGNVQRPGEYLRQIRIAKKLELESVAADLKMPVKTLTALEN 60
MEINPNSQQPTGSSLPTSALGN+QRPGEYLRQIR+++K ELE V++DL MP+KTL+ALE
Sbjct 1 MEINPNSQQPTGSSLPTSALGNIQRPGEYLRQIRVSQKKELEQVSSDLNMPLKTLSALEQ 60
Query 61 DDYKALPEATFIKGYYRSYAKYLSADASVITQRFDEIYANDTGLLPNHALTNSPIKIMGK 120
DDYK+LPEATFIKGYYRSYAKYL+ADA+ I QRFDEIYANDTGLLPNHAL NSPIKIMGK
Sbjct 61 DDYKSLPEATFIKGYYRSYAKYLNADATAIIQRFDEIYANDTGLLPNHALNNSPIKIMGK 120
Query 121 LPGSNSERNRKWLKRGVLIVLAIALIALVVTVIQNWSNKKSGATAPAA--SNVEVLPL-N 177
LPGSNS+RN+KWLKR +L +L +A+++L+V +Q W++ K A P A SNVEVLP+
Sbjct 121 LPGSNSDRNKKWLKRALLAILIVAVVSLIVMGVQKWTSNKEEADVPKANQSNVEVLPMKG 180
Query 178 SASSTSGDHLVLNFTHPTSVHIVDSTGKVLATGRQASTLELTGQSPFQIRLDDATAVSLS 237
SAS+T+GD LVLNF PTSVHIVD+TGKVLATGRQASTL L G+SPFQIRLDDATAVSLS
Sbjct 181 SASATAGDQLVLNFNRPTSVHIVDATGKVLATGRQASTLTLNGESPFQIRLDDATAVSLS 240
Query 238 LNQEQISLSPYTVNGKAEFRLSR 260
LNQEQISLSPYTVNGKAEFRLSR
Sbjct 241 LNQEQISLSPYTVNGKAEFRLSR 263
Lambda K H a alpha
0.315 0.130 0.360 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 670359
Database: 0bab414015303382d116d0ee2b5c8755.TrEMBL.fasta
Posted date: May 11, 2024 1:12 PM
Number of letters in database: 3,649
Number of sequences in database: 14
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
