BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: bcd74a7ca99aaf011e83c65777bd65f3.SwissProt.fasta
8 sequences; 2,838 total letters
Query= ACIAD0563
Length=234
Score E
Sequences producing significant alignments: (Bits) Value
O87406 Ancillary SecYEG translocon subunit [Neisseria gonorrhoeae... 97.8 1e-28
O52728 Ancillary SecYEG translocon subunit [Aggregatibacter actin... 81.6 1e-22
P76576 Ancillary SecYEG translocon subunit [Escherichia coli (str... 77.0 7e-21
O51880 Ancillary SecYEG translocon subunit [Buchnera aphidicola s... 53.1 3e-12
Q94899 COP9 signalosome complex subunit 2 [Drosophila melanogaster] 40.4 1e-07
O18416 Tropomyosin [Dermatophagoides pteronyssinus] 35.4 4e-06
Q9NFZ4 Tropomyosin [Lepidoglyphus destructor] 34.3 1e-05
Q9KM67 Nuclease SbcCD subunit C [Vibrio cholerae serotype O1 (str... 34.3 1e-05
>O87406 Ancillary SecYEG translocon subunit [Neisseria gonorrhoeae
(strain ATCC 700825 / FA 1090)]
Length=209
Score = 97.8 bits (242), Expect = 1e-28
Identities = 62/209 (30%), Positives = 103/209 (49%), Gaps = 5/209 (2%)
Query 4 LSEEEQLDNLKSFTKKYGSAIISGILIALIAFFGWQYWQKKTLAENQTRTAKVQQLIDQA 63
L E+++LDN K F K G + + +++A + + G+ +Q + ++NQ A + ++++A
Sbjct 5 LEEQQELDNFKYFWKTTGKWLFALLILAALGYLGYTVYQNRAASQNQEAAAVLANIVEKA 64
Query 64 QAAEANPDALNNLYAAADKIVKDAPDSIQAVQTEFLLAKIAYDKGDYATAEKSLKKIENS 123
Q N + + A K+ + P SI A Q + A +D Y AE LK + ++
Sbjct 65 Q----NKAPQSEINAELSKLQQSYPHSISAAQATLMAAATEFDAQRYDVAEGHLKWVLSN 120
Query 124 KINDEGLVQLIKLRLANAQLAQKKYDEALKTLSLVTDPAFKATAEEARGDVYVAKNDIAS 183
+ D + L RL L QKKYD AL L + F E +GDVY A+
Sbjct 121 Q-KDSLIQALAAQRLGVVLLQQKKYDAALAALDTPVEADFAPLLMETKGDVYAAQEKSQE 179
Query 184 ARKAYQSAWNVLLERKQERQILQIKLESV 212
A K Y A + + R++LQ+KL+S+
Sbjct 180 ALKNYGQALEKMPQDSVGRELLQMKLDSL 208
>O52728 Ancillary SecYEG translocon subunit [Aggregatibacter actinomycetemcomitans]
Length=204
Score = 81.6 bits (200), Expect = 1e-22
Identities = 59/210 (28%), Positives = 107/210 (51%), Gaps = 11/210 (5%)
Query 4 LSEEEQLDNLKSFTKKYGSAIISGILIALIAFFGWQYWQKKTLAENQTRTAKVQQ-LIDQ 62
+ EE++L +K++ + II +IA FGW YWQ + + +A+ +Q L +
Sbjct 5 IEEEQELTAIKAWWNENYKFIIVCFVIAFGGVFGWNYWQSHQIQKMHKASAEYEQALFNY 64
Query 63 AQAAEANPDALNNLYAAADKIVKDAPDSIQAVQTEFLLAKIAYDKGDYATAEKSLKKIEN 122
+ +A + N + +K+ + AV AKIA + D+ AE +LK+
Sbjct 65 QKDPKAQAEQFN-------QFIKNNEKTSYAVLALLDKAKIAVENKDFPLAEDALKQAM- 116
Query 123 SKINDEGLVQLIKLRLANAQLAQKKYDEALKTLSLVTDPAFKATAEEARGDVYVAKNDIA 182
++ ND+ L + LRLA+ Q + D AL++L V + A+ + GD+ +AK D
Sbjct 117 AQSNDDILSSVSALRLASVQFQLGQLDPALESLKSVKEQAWNSAKNLLAGDIQLAKGDKE 176
Query 183 SARKAYQSAWNVLLERKQERQILQIKLESV 212
+A+K+YQ A E+Q++Q++L ++
Sbjct 177 TAKKSYQQAQE--NAGALEQQLIQVRLNNL 204
>P76576 Ancillary SecYEG translocon subunit [Escherichia coli
(strain K12)]
Length=206
Score = 77.0 bits (188), Expect = 7e-21
Identities = 50/186 (27%), Positives = 94/186 (51%), Gaps = 8/186 (4%)
Query 5 SEEEQLDNLKSFTKKYGSAIISGILIALIAFFGWQYWQKKTLAENQTRTAKVQQLIDQAQ 64
+E +Q++ +K F + G A+ G+++ + A GW+YW + ++ + Q +
Sbjct 6 NENDQVEAVKRFFAENGKALAVGVILGVGALIGWRYWNSHQVDSARSASLAYQNAV--TA 63
Query 65 AAEANPDALNNLYAAADKIVKDAPDSIQAVQTEFLLAKIAYDKGDYATAEKSLKKIENSK 124
+E PD++ AA+K + ++ A+ + LA+ DK + A L++ +
Sbjct 64 VSEGKPDSI----PAAEKFAAENKNTYGALAS-LELAQQFVDKNELEKAAAQLQQ-GLAD 117
Query 125 INDEGLVQLIKLRLANAQLAQKKYDEALKTLSLVTDPAFKATAEEARGDVYVAKNDIASA 184
+DE L +I LRLA Q+ K+ D ALKTL + + A + RG+ ++K D A
Sbjct 118 TSDENLKAVINLRLARVQVQLKQADAALKTLDTIKGEGWAAIVADLRGEALLSKGDKQGA 177
Query 185 RKAYQS 190
R A+++
Sbjct 178 RSAWEA 183
>O51880 Ancillary SecYEG translocon subunit [Buchnera aphidicola
subsp. Schizaphis graminum (strain Sg)]
Length=194
Score = 53.1 bits (126), Expect = 3e-12
Identities = 41/187 (22%), Positives = 88/187 (47%), Gaps = 12/187 (6%)
Query 28 ILIALIAFFGWQYWQKKTLAENQTRTAKVQQLIDQAQAAEANPDALNNLYAAADKIVKDA 87
+L LI F +W K + + K+++L + + N NL + + + +
Sbjct 16 VLFFLIFFIFCSFWFIKP----KEKKLKLEKLRYEEVIKKINAKNNQNL-KSVENFITEN 70
Query 88 PDSIQAVQTEFLLAKIAYDKGDYATAEKSLKKIENSK--INDEGLVQLIKLRLANAQLAQ 145
+ + + FL K DK +K+L ++ NS +E L ++K+R+A ++ Q
Sbjct 71 KNIYGTLSSLFLAKKYILDKN----LDKALIQLNNSLKYTKEENLQNILKIRIAKIKIQQ 126
Query 146 KKYDEALKTLSLVTDPAFKATAEEARGDVYVAKNDIASARKAYQSAWNVLLERKQERQIL 205
K +A+K L + D ++K E +GD+++ +I A A++ + L + ++I+
Sbjct 127 NKNQDAIKILEEIKDNSWKNIVENMKGDIFMKNKEIKKAILAWKKS-KYLEKSNASKEII 185
Query 206 QIKLESV 212
+K+ +
Sbjct 186 NMKINEI 192
Score = 23.5 bits (49), Expect = 0.028
Identities = 32/123 (26%), Positives = 44/123 (36%), Gaps = 33/123 (27%)
Query 9 QLDNLKSFTKKYGSAIISGILIALIAFFGWQYWQKKTLAENQTRTAKVQQLIDQAQAAEA 68
QL+N +TK+ I I IA I K+QQ
Sbjct 98 QLNNSLKYTKEENLQNILKIRIAKI---------------------KIQQ--------NK 128
Query 69 NPDALNNLYAAAD----KIVKDAPDSIQAVQTEFLLAKIAYDKGDYATAEKSLKKIENSK 124
N DA+ L D IV++ I E A +A+ K Y + K+I N K
Sbjct 129 NQDAIKILEEIKDNSWKNIVENMKGDIFMKNKEIKKAILAWKKSKYLEKSNASKEIINMK 188
Query 125 IND 127
IN+
Sbjct 189 INE 191
>Q94899 COP9 signalosome complex subunit 2 [Drosophila melanogaster]
Length=444
Score = 40.4 bits (93), Expect = 1e-07
Identities = 34/181 (19%), Positives = 73/181 (40%), Gaps = 17/181 (9%)
Query 43 KKTLAENQTRTAKVQQLIDQAQAAEANPDALNNLYAAADKIVKDAPDSIQAVQTEFLLAK 102
K + N + + + ++D ++ N L N Y ++DA + +T L K
Sbjct 101 KSAVTRNHSEKS-INSILDYISTSK-NMALLQNFYETTLDALRDAKNDRLWFKTNTKLGK 158
Query 103 IAYDKGDYATAEKSLKKIENSKINDEG-----------LVQLIKLRLANAQLAQKK---- 147
+ +D+ D+ +K LK++ S D+G + +++++ Q KK
Sbjct 159 LYFDRSDFTKLQKILKQLHQSCQTDDGEDDLKKGTQLLEIYALEIQMYTVQKNNKKLKAL 218
Query 148 YDEALKTLSLVTDPAFKATAEEARGDVYVAKNDIASARKAYQSAWNVLLERKQERQILQI 207
Y+++L S + P E G +++ + + A + A+ E R+ +
Sbjct 219 YEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCL 278
Query 208 K 208
K
Sbjct 279 K 279
>O18416 Tropomyosin [Dermatophagoides pteronyssinus]
Length=284
Score = 35.4 bits (80), Expect = 4e-06
Identities = 43/197 (22%), Positives = 85/197 (43%), Gaps = 29/197 (15%)
Query 43 KKTLAENQTRTAKVQQLIDQAQAAEANPDALNNLYAAADKIVKDAPDSIQAVQTEFLLA- 101
+K+ E + K+QQ+ ++ + A N +K ++ A + A+ L
Sbjct 37 EKSEEEVRALQKKIQQIENELDQVQEQLSAANTKLEEKEKALQTAEGDVAALNRRIQLIE 96
Query 102 ----------KIAYDKGDYAT-----AEKSLKKIENSKINDEGLVQLIKLRLANAQL--- 143
KIA K + A+ +E+ K +E+ I DE ++ ++ +L A++
Sbjct 97 EDLERSEERLKIATAKLEEASQSADESERMRKMLEHRSITDEERMEGLENQLKEARMMAE 156
Query 144 -AQKKYDEALKTLSLVTDPAFKA-----TAE----EARGDVYVAKNDIASARKAYQSAWN 193
A +KYDE + L++V +A T E E ++ V N++ S + + A
Sbjct 157 DADRKYDEVARKLAMVEADLERAEERAETGESKIVELEEELRVVGNNLKSLEVSEEKAQQ 216
Query 194 VLLERKQERQILQIKLE 210
+Q+ +I+ KL+
Sbjct 217 REEAHEQQIRIMTTKLK 233
Score = 28.5 bits (62), Expect = 8e-04
Identities = 31/138 (22%), Positives = 59/138 (43%), Gaps = 8/138 (6%)
Query 91 IQAVQTEFLLAKIAYDKGDYATAEKSLKKIENSKINDEGLVQLIKLRLANAQLAQKKYDE 150
++A++ + K+ D AE + +K ++ + E + ++ Q + + D+
Sbjct 1 MEAIKNKMQAMKLEKDNA-IDRAEIAEQKARDANLRAEKSEEEVRALQKKIQQIENELDQ 59
Query 151 ALKTLSLVTDPAFKATAEEARGDVYVAKNDIASARKAYQSAWNVLLERKQER-QILQIKL 209
+ LS A EE + A+ D+A+ + Q LER +ER +I KL
Sbjct 60 VQEQLS-----AANTKLEEKEKALQTAEGDVAALNRRIQLI-EEDLERSEERLKIATAKL 113
Query 210 ESVGVLVDDPEIERPILD 227
E D+ E R +L+
Sbjct 114 EEASQSADESERMRKMLE 131
>Q9NFZ4 Tropomyosin [Lepidoglyphus destructor]
Length=284
Score = 34.3 bits (77), Expect = 1e-05
Identities = 40/190 (21%), Positives = 84/190 (44%), Gaps = 18/190 (9%)
Query 55 KVQQLIDQAQAAEANPDALNNLYAAADKIVKDAPDSIQAVQTEFLLAKIAYDKGDYATAE 114
K+++ Q AE + ALN ++ ++ + ++ ++ A + D+ +E
Sbjct 70 KLEEKEKSLQTAEGDVAALNRRIQLIEEDLERSEGRLKIATSKLEEASQSADE-----SE 124
Query 115 KSLKKIENSKINDEGLVQLIKLRLANAQL----AQKKYDEALKTLSLVTDPAFKA----- 165
+ K +E+ I DE ++ ++ +L A++ A +KYDE + L++V +A
Sbjct 125 RMRKMLEHRSITDEERMEGLESQLKEARMMAEDADRKYDEVARKLAMVEADLERAEERAE 184
Query 166 TAE----EARGDVYVAKNDIASARKAYQSAWNVLLERKQERQILQIKLESVGVLVDDPEI 221
T E E ++ V N++ S + + A +Q+ +I+ KL+ + E
Sbjct 185 TGESKIVELEEELRVVGNNLKSLEVSEEKAQQREEAYEQQIRIMTTKLKEAEARAEFAER 244
Query 222 ERPILDTQVD 231
L +VD
Sbjct 245 SVQKLQKEVD 254
>Q9KM67 Nuclease SbcCD subunit C [Vibrio cholerae serotype O1
(strain ATCC 39315 / El Tor Inaba N16961)]
Length=1013
Score = 34.3 bits (77), Expect = 1e-05
Identities = 20/70 (29%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query 42 QKKTLAENQTRTAKVQQLIDQAQAAEANPDALNNLYAAADKIVKDAPDSIQAVQTEFLLA 101
Q++ L + + A++ QL+ Q QA E LN L A +++ +QT+ A
Sbjct 420 QQRQLTRLEVQKARMNQLVQQVQAREREQSLLNELQTAQQALLRFEQQH-HHIQTQAEQA 478
Query 102 KIAYDKGDYA 111
K+ DK ++A
Sbjct 479 KLTADKLEFA 488
Score = 21.9 bits (45), Expect = 0.12
Identities = 28/118 (24%), Positives = 44/118 (37%), Gaps = 7/118 (6%)
Query 39 QYWQKKTLAENQTRTAKVQQLI----DQAQAAEANPDALNNLYAAADKIVKDAPDSIQAV 94
Q WQ TLA+ Q A ++Q I + + N K A +
Sbjct 633 QAWQ--TLAQLQAELASLRQEIPPELSDLDTLRSAIGRVQNQIEILQKAEHTAREQWVQA 690
Query 95 QTEFLLAKIAYDKGDYATAEKSLKKIENSKINDEGLVQLIKLRLANAQLAQKKYDEAL 152
Q +F + AY A E ++ E + +GL+ +A LA + DEA+
Sbjct 691 QKQFASVQAAYQAAIEAHRESQRQQEETTSAWQQGLLH-SGFSDESAYLAARLTDEAI 747
Score = 19.2 bits (38), Expect = 0.82
Identities = 10/21 (48%), Positives = 12/21 (57%), Gaps = 0/21 (0%)
Query 182 ASARKAYQSAWNVLLERKQER 202
AS R S LL+RK+ER
Sbjct 871 ASQRLMKMSRGRYLLKRKEER 891
Score = 16.5 bits (31), Expect = 5.8
Identities = 22/106 (21%), Positives = 40/106 (38%), Gaps = 15/106 (14%)
Query 113 AEKSLKKIENSKINDEGLVQLIKLRLANAQLAQKKYDEALKTLSLVTDPAFKATAEEARG 172
AEK+ ++E + + + L L Q + D + + D K A EA
Sbjct 776 AEKNRPELEPLLVKVTQAEEKMALALQAFTQHQSRMDGLQRVAKQLADLYQKNRALEAEY 835
Query 173 DVYVAKNDIASARKAYQSAWNVLLERKQERQILQIKLESVGVLVDD 218
V +DIA+ + + + + + +GVL+DD
Sbjct 836 QVVGTLSDIANGKTGAKVSLHRFV---------------LGVLLDD 866
Lambda K H a alpha
0.315 0.129 0.348 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 488492
Database: bcd74a7ca99aaf011e83c65777bd65f3.SwissProt.fasta
Posted date: May 31, 2024 10:33 AM
Number of letters in database: 2,838
Number of sequences in database: 8
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
