Comparative Genomics

ACIAD0570 / TrEMBL Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: d3f12b130fc8ff5f12f5f7d47f4e92a0.TrEMBL.fasta
           12 sequences; 2,231 total letters



Query= ACIAD0570

Length=189
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

A0A7G2SCB6 Clp protease [Acinetobacter sp]                            392     9e-146
Q6FEL4 Clp protease [Acinetobacter baylyi (strain ATCC 33305 / BD...  392     9e-146
A0A3A8EZD9 Clp protease [Acinetobacter guerrae]                       315     4e-115
N9DCD5 Clp protease [Acinetobacter ursingii ANC 3649]                 313     3e-114
A0A427PTT3 Clp protease [Acinetobacter sp. FDAARGOS_515]              313     3e-114
A0A7T9Z859 Septation protein IspZ [Acinetobacter ursingii]            308     1e-112
A0A009Z8Q0 Intracellular septation A family protein [Acinetobacte...  308     1e-112
A0A0M1I5H2 Clp protease [Acinetobacter sp. C15]                       286     6e-104
N9BS57 Clp protease [Acinetobacter soli NIPH 2899]                    286     6e-104
A0A3R9AWW4 Clp protease [Acinetobacter soli]                          286     1e-103
A0A1P8EMC2 Clp protease [Acinetobacter soli]                          285     4e-103
K8ZUM7 Intracellular septation protein A [Acinetobacter sp. WC-141]   268     9e-97 


>A0A7G2SCB6 Clp protease [Acinetobacter sp]
Length=188

 Score = 392 bits (1008),  Expect = 9e-146
 Identities = 188/188 (100%), Positives = 188/188 (100%), Gaps = 0/188 (0%)

Query  1    MNSLFKWIIAICFIAYPFIVGWSLAHGHFYVASLLLIGIGLIRFLSKSNSLLWPLTAFAV  60
            MNSLFKWIIAICFIAYPFIVGWSLAHGHFYVASLLLIGIGLIRFLSKSNSLLWPLTAFAV
Sbjct  1    MNSLFKWIIAICFIAYPFIVGWSLAHGHFYVASLLLIGIGLIRFLSKSNSLLWPLTAFAV  60

Query  61   LCGSLSLILNDHAWLKVYPVLMSLGAFCIFASTLWRPPSMIERFARIMEPDLPESGVQWT  120
            LCGSLSLILNDHAWLKVYPVLMSLGAFCIFASTLWRPPSMIERFARIMEPDLPESGVQWT
Sbjct  61   LCGSLSLILNDHAWLKVYPVLMSLGAFCIFASTLWRPPSMIERFARIMEPDLPESGVQWT  120

Query  121  RKVTMIWCGFFLINASIAWCTVIWMSTQIWVIYNGFISYVLMGILLLGEFILRKRYRRLH  180
            RKVTMIWCGFFLINASIAWCTVIWMSTQIWVIYNGFISYVLMGILLLGEFILRKRYRRLH
Sbjct  121  RKVTMIWCGFFLINASIAWCTVIWMSTQIWVIYNGFISYVLMGILLLGEFILRKRYRRLH  180

Query  181  HNDEQSLE  188
            HNDEQSLE
Sbjct  181  HNDEQSLE  188


>Q6FEL4 Clp protease [Acinetobacter baylyi (strain ATCC 33305 
/ BD413 / ADP1)]
Length=188

 Score = 392 bits (1008),  Expect = 9e-146
 Identities = 188/188 (100%), Positives = 188/188 (100%), Gaps = 0/188 (0%)

Query  1    MNSLFKWIIAICFIAYPFIVGWSLAHGHFYVASLLLIGIGLIRFLSKSNSLLWPLTAFAV  60
            MNSLFKWIIAICFIAYPFIVGWSLAHGHFYVASLLLIGIGLIRFLSKSNSLLWPLTAFAV
Sbjct  1    MNSLFKWIIAICFIAYPFIVGWSLAHGHFYVASLLLIGIGLIRFLSKSNSLLWPLTAFAV  60

Query  61   LCGSLSLILNDHAWLKVYPVLMSLGAFCIFASTLWRPPSMIERFARIMEPDLPESGVQWT  120
            LCGSLSLILNDHAWLKVYPVLMSLGAFCIFASTLWRPPSMIERFARIMEPDLPESGVQWT
Sbjct  61   LCGSLSLILNDHAWLKVYPVLMSLGAFCIFASTLWRPPSMIERFARIMEPDLPESGVQWT  120

Query  121  RKVTMIWCGFFLINASIAWCTVIWMSTQIWVIYNGFISYVLMGILLLGEFILRKRYRRLH  180
            RKVTMIWCGFFLINASIAWCTVIWMSTQIWVIYNGFISYVLMGILLLGEFILRKRYRRLH
Sbjct  121  RKVTMIWCGFFLINASIAWCTVIWMSTQIWVIYNGFISYVLMGILLLGEFILRKRYRRLH  180

Query  181  HNDEQSLE  188
            HNDEQSLE
Sbjct  181  HNDEQSLE  188


>A0A3A8EZD9 Clp protease [Acinetobacter guerrae]
Length=187

 Score = 315 bits (807),  Expect = 4e-115
 Identities = 142/187 (76%), Positives = 167/187 (89%), Gaps = 0/187 (0%)

Query  1    MNSLFKWIIAICFIAYPFIVGWSLAHGHFYVASLLLIGIGLIRFLSKSNSLLWPLTAFAV  60
            MN   KWI AI FIAYPFIVGWSL+HGHF+  S+LL+ +G+ R + KSN+LLWPL+ FA+
Sbjct  1    MNHFLKWITAIFFIAYPFIVGWSLSHGHFFAVSILLVAVGMSRLVFKSNALLWPLSMFAI  60

Query  61   LCGSLSLILNDHAWLKVYPVLMSLGAFCIFASTLWRPPSMIERFARIMEPDLPESGVQWT  120
            LCG LS++LNDHAWLK YPVLMSLGA  IFASTLWRPPSMIERFARIM+PDLPESGVQWT
Sbjct  61   LCGGLSVMLNDHAWLKFYPVLMSLGALGIFASTLWRPPSMIERFARIMQPDLPESGVQWT  120

Query  121  RKVTMIWCGFFLINASIAWCTVIWMSTQIWVIYNGFISYVLMGILLLGEFILRKRYRRLH  180
            RKVT++WCGFFL NA++AWCT+++  TQIWV+YNGFISYVLMGILLLGEFILRKR++RL+
Sbjct  121  RKVTIVWCGFFLFNAAMAWCTIVYAPTQIWVLYNGFISYVLMGILLLGEFILRKRHQRLN  180

Query  181  HNDEQSL  187
            +NDEQ L
Sbjct  181  NNDEQLL  187


>N9DCD5 Clp protease [Acinetobacter ursingii ANC 3649]
Length=187

 Score = 313 bits (801),  Expect = 3e-114
 Identities = 142/187 (76%), Positives = 167/187 (89%), Gaps = 0/187 (0%)

Query  1    MNSLFKWIIAICFIAYPFIVGWSLAHGHFYVASLLLIGIGLIRFLSKSNSLLWPLTAFAV  60
            MN   KWI AI FIAYPFIVGWSL++GHF+  S+LL+ +G+ R + KSN+LLWPL+ FA+
Sbjct  1    MNHFLKWITAIFFIAYPFIVGWSLSNGHFFAVSILLVMVGMSRLVFKSNALLWPLSMFAI  60

Query  61   LCGSLSLILNDHAWLKVYPVLMSLGAFCIFASTLWRPPSMIERFARIMEPDLPESGVQWT  120
            LCG LS++LNDHAWLK YPVLMSLGA  IFASTLWRPPSMIERFARIM+PDLPESGVQWT
Sbjct  61   LCGGLSVMLNDHAWLKFYPVLMSLGALGIFASTLWRPPSMIERFARIMQPDLPESGVQWT  120

Query  121  RKVTMIWCGFFLINASIAWCTVIWMSTQIWVIYNGFISYVLMGILLLGEFILRKRYRRLH  180
            RKVTM+WCGFFL NA++AWCT+++  TQIWV+YNGFISYVLMGILLLGEFILRKR++RL+
Sbjct  121  RKVTMVWCGFFLFNAAMAWCTIVYAPTQIWVLYNGFISYVLMGILLLGEFILRKRHQRLN  180

Query  181  HNDEQSL  187
            +NDEQ L
Sbjct  181  NNDEQFL  187


>A0A427PTT3 Clp protease [Acinetobacter sp. FDAARGOS_515]
Length=187

 Score = 313 bits (801),  Expect = 3e-114
 Identities = 142/187 (76%), Positives = 167/187 (89%), Gaps = 0/187 (0%)

Query  1    MNSLFKWIIAICFIAYPFIVGWSLAHGHFYVASLLLIGIGLIRFLSKSNSLLWPLTAFAV  60
            MN   KWI AI FIAYPFIVGWSL++GHF+  S+LL+ +G+ R + KSN+LLWPL+ FA+
Sbjct  1    MNHFLKWITAIFFIAYPFIVGWSLSNGHFFAVSILLVMVGMSRLVFKSNALLWPLSMFAI  60

Query  61   LCGSLSLILNDHAWLKVYPVLMSLGAFCIFASTLWRPPSMIERFARIMEPDLPESGVQWT  120
            LCG LS++LNDHAWLK YPVLMSLGA  IFASTLWRPPSMIERFARIM+PDLPESGVQWT
Sbjct  61   LCGGLSVMLNDHAWLKFYPVLMSLGALGIFASTLWRPPSMIERFARIMQPDLPESGVQWT  120

Query  121  RKVTMIWCGFFLINASIAWCTVIWMSTQIWVIYNGFISYVLMGILLLGEFILRKRYRRLH  180
            RKVTM+WCGFFL NA++AWCT+++  TQIWV+YNGFISYVLMGILLLGEFILRKR++RL+
Sbjct  121  RKVTMVWCGFFLFNAAMAWCTIVYAPTQIWVLYNGFISYVLMGILLLGEFILRKRHQRLN  180

Query  181  HNDEQSL  187
            +NDEQ L
Sbjct  181  NNDEQFL  187


>A0A7T9Z859 Septation protein IspZ [Acinetobacter ursingii]
Length=187

 Score = 308 bits (790),  Expect = 1e-112
 Identities = 139/187 (74%), Positives = 166/187 (89%), Gaps = 0/187 (0%)

Query  1    MNSLFKWIIAICFIAYPFIVGWSLAHGHFYVASLLLIGIGLIRFLSKSNSLLWPLTAFAV  60
            MN   KWI AI FIAYPFIVGWSL++GHF+  S+LL+ +G+ R + KSN+LLWPL+ FA+
Sbjct  1    MNHFLKWITAIFFIAYPFIVGWSLSNGHFFAVSILLVMVGMSRLVFKSNALLWPLSMFAI  60

Query  61   LCGSLSLILNDHAWLKVYPVLMSLGAFCIFASTLWRPPSMIERFARIMEPDLPESGVQWT  120
            LCG LS++LNDHAWLK YPVLMSLGA  IFASTLWRPPSMIERFARIM+PDLPESGV WT
Sbjct  61   LCGGLSVMLNDHAWLKFYPVLMSLGALGIFASTLWRPPSMIERFARIMQPDLPESGVNWT  120

Query  121  RKVTMIWCGFFLINASIAWCTVIWMSTQIWVIYNGFISYVLMGILLLGEFILRKRYRRLH  180
            RKVT++WCGFF+ NA++AWCT+++  TQIWV+YNGFISYVLMGILLLGEFILRKR++RL+
Sbjct  121  RKVTIVWCGFFIFNAAMAWCTIVYAPTQIWVLYNGFISYVLMGILLLGEFILRKRHQRLN  180

Query  181  HNDEQSL  187
            +NDEQ L
Sbjct  181  NNDEQFL  187


>A0A009Z8Q0 Intracellular septation A family protein [Acinetobacter 
sp. 479375]
Length=187

 Score = 308 bits (790),  Expect = 1e-112
 Identities = 139/187 (74%), Positives = 166/187 (89%), Gaps = 0/187 (0%)

Query  1    MNSLFKWIIAICFIAYPFIVGWSLAHGHFYVASLLLIGIGLIRFLSKSNSLLWPLTAFAV  60
            MN   KWI AI FIAYPFIVGWSL++GHF+  S+LL+ +G+ R + KSN+LLWPL+ FA+
Sbjct  1    MNHFLKWITAIFFIAYPFIVGWSLSNGHFFAVSILLVMVGMSRLVFKSNALLWPLSMFAI  60

Query  61   LCGSLSLILNDHAWLKVYPVLMSLGAFCIFASTLWRPPSMIERFARIMEPDLPESGVQWT  120
            LCG LS++LNDHAWLK YPVLMSLGA  IFASTLWRPPSMIERFARIM+PDLPESGV WT
Sbjct  61   LCGGLSVMLNDHAWLKFYPVLMSLGALGIFASTLWRPPSMIERFARIMQPDLPESGVNWT  120

Query  121  RKVTMIWCGFFLINASIAWCTVIWMSTQIWVIYNGFISYVLMGILLLGEFILRKRYRRLH  180
            RKVT++WCGFF+ NA++AWCT+++  TQIWV+YNGFISYVLMGILLLGEFILRKR++RL+
Sbjct  121  RKVTIVWCGFFIFNAAMAWCTIVYAPTQIWVLYNGFISYVLMGILLLGEFILRKRHQRLN  180

Query  181  HNDEQSL  187
            +NDEQ L
Sbjct  181  NNDEQFL  187


>A0A0M1I5H2 Clp protease [Acinetobacter sp. C15]
Length=184

 Score = 286 bits (733),  Expect = 6e-104
 Identities = 126/184 (68%), Positives = 159/184 (86%), Gaps = 0/184 (0%)

Query  1    MNSLFKWIIAICFIAYPFIVGWSLAHGHFYVASLLLIGIGLIRFLSKSNSLLWPLTAFAV  60
            M  L + +IA+ F+AYPF+VGWSLA G F   S++LI +GL+R L KS++ LWPL+ F V
Sbjct  1    MQKLMQVLIALMFVAYPFLVGWSLARGSFMAVSIMLIALGLLRLLVKSSAFLWPLSLFTV  60

Query  61   LCGSLSLILNDHAWLKVYPVLMSLGAFCIFASTLWRPPSMIERFARIMEPDLPESGVQWT  120
            +CG++S++ NDH WLKVYPVL SLGAF IFASTLWRPPSMIERFARIM+PDLP SGVQWT
Sbjct  61   VCGAMSVLFNDHMWLKVYPVLTSLGAFAIFASTLWRPPSMIERFARIMQPDLPASGVQWT  120

Query  121  RKVTMIWCGFFLINASIAWCTVIWMSTQIWVIYNGFISYVLMGILLLGEFILRKRYRRLH  180
            R+VT +WCGFF++NA+I+W T+++ ST+IWV+YNGFISYVLMGILL+GEFILRKR++RL 
Sbjct  121  RRVTFVWCGFFILNAAISWWTIVYASTEIWVLYNGFISYVLMGILLIGEFILRKRHQRLQ  180

Query  181  HNDE  184
            HN+E
Sbjct  181  HNNE  184


>N9BS57 Clp protease [Acinetobacter soli NIPH 2899]
Length=184

 Score = 286 bits (733),  Expect = 6e-104
 Identities = 126/184 (68%), Positives = 159/184 (86%), Gaps = 0/184 (0%)

Query  1    MNSLFKWIIAICFIAYPFIVGWSLAHGHFYVASLLLIGIGLIRFLSKSNSLLWPLTAFAV  60
            M  L + +IA+ F+AYPF+VGWSLA G F   S++LI +GL+R L KS++ LWPL+ F V
Sbjct  1    MQKLMQVLIALMFVAYPFLVGWSLARGSFMAVSIMLIALGLLRLLVKSSAFLWPLSLFTV  60

Query  61   LCGSLSLILNDHAWLKVYPVLMSLGAFCIFASTLWRPPSMIERFARIMEPDLPESGVQWT  120
            +CG++S++ NDH WLKVYPVL SLGAF IFASTLWRPPSMIERFARIM+PDLP SGVQWT
Sbjct  61   VCGAMSVLFNDHMWLKVYPVLTSLGAFAIFASTLWRPPSMIERFARIMQPDLPASGVQWT  120

Query  121  RKVTMIWCGFFLINASIAWCTVIWMSTQIWVIYNGFISYVLMGILLLGEFILRKRYRRLH  180
            R+VT +WCGFF++NA+I+W T+++ ST+IWV+YNGFISYVLMGILL+GEFILRKR++RL 
Sbjct  121  RRVTFVWCGFFILNAAISWWTIVYASTEIWVLYNGFISYVLMGILLIGEFILRKRHQRLQ  180

Query  181  HNDE  184
            HN+E
Sbjct  181  HNNE  184


>A0A3R9AWW4 Clp protease [Acinetobacter soli]
Length=184

 Score = 286 bits (731),  Expect = 1e-103
 Identities = 127/184 (69%), Positives = 158/184 (86%), Gaps = 0/184 (0%)

Query  1    MNSLFKWIIAICFIAYPFIVGWSLAHGHFYVASLLLIGIGLIRFLSKSNSLLWPLTAFAV  60
            M  L + +IA+ F+AYPF+VGWSLA G F   S++LI +GL+R L KS++ LWPL+ F V
Sbjct  1    MQKLMQVLIALMFVAYPFLVGWSLARGSFMAVSIMLIALGLLRLLVKSSAFLWPLSLFTV  60

Query  61   LCGSLSLILNDHAWLKVYPVLMSLGAFCIFASTLWRPPSMIERFARIMEPDLPESGVQWT  120
            +CG++S++ NDH WLKVYPVL SLGAF IFASTLWRPPSMIERFARIM+PDLP SGVQWT
Sbjct  61   VCGAMSVLFNDHMWLKVYPVLTSLGAFAIFASTLWRPPSMIERFARIMQPDLPASGVQWT  120

Query  121  RKVTMIWCGFFLINASIAWCTVIWMSTQIWVIYNGFISYVLMGILLLGEFILRKRYRRLH  180
            R+VT +WCGFF++NA+I+W T ++ STQIWV+YNGFISYVLMGILL+GEFILRKR++RL 
Sbjct  121  RRVTFVWCGFFILNAAISWWTSVYASTQIWVLYNGFISYVLMGILLIGEFILRKRHQRLQ  180

Query  181  HNDE  184
            HN+E
Sbjct  181  HNNE  184


>A0A1P8EMC2 Clp protease [Acinetobacter soli]
Length=184

 Score = 285 bits (728),  Expect = 4e-103
 Identities = 126/184 (68%), Positives = 158/184 (86%), Gaps = 0/184 (0%)

Query  1    MNSLFKWIIAICFIAYPFIVGWSLAHGHFYVASLLLIGIGLIRFLSKSNSLLWPLTAFAV  60
            M  L + +IA+ F+AYPF+VGWSLA G F   S++LI +GL+R L KS++ LWPL+ F V
Sbjct  1    MQKLMQVLIALMFVAYPFLVGWSLARGSFMAVSIMLIALGLLRLLVKSSAFLWPLSLFTV  60

Query  61   LCGSLSLILNDHAWLKVYPVLMSLGAFCIFASTLWRPPSMIERFARIMEPDLPESGVQWT  120
            +CG++S++ NDH WLKVYPVL SLGAF IFASTLWRPPSMIERFARIM+PDLP SGVQWT
Sbjct  61   VCGAMSVLFNDHMWLKVYPVLTSLGAFAIFASTLWRPPSMIERFARIMQPDLPASGVQWT  120

Query  121  RKVTMIWCGFFLINASIAWCTVIWMSTQIWVIYNGFISYVLMGILLLGEFILRKRYRRLH  180
            R+VT +WCGFF++NA+I+W T ++ ST+IWV+YNGFISYVLMGILL+GEFILRKR++RL 
Sbjct  121  RRVTFVWCGFFILNAAISWWTSVYASTEIWVLYNGFISYVLMGILLIGEFILRKRHQRLQ  180

Query  181  HNDE  184
            HN+E
Sbjct  181  HNNE  184


>K8ZUM7 Intracellular septation protein A [Acinetobacter sp. WC-141]
Length=184

 Score = 268 bits (686),  Expect = 9e-97
 Identities = 128/183 (70%), Positives = 151/183 (83%), Gaps = 0/183 (0%)

Query  1    MNSLFKWIIAICFIAYPFIVGWSLAHGHFYVASLLLIGIGLIRFLSKSNSLLWPLTAFAV  60
            M  L K IIA+ F+ YPFIVGWSL HG F   SLLLIG+G++R L KSNSLLWPLT FA+
Sbjct  1    MKFLLKGIIAVLFVLYPFIVGWSLTHGQFVWVSLLLIGLGVVRLLGKSNSLLWPLTGFAI  60

Query  61   LCGSLSLILNDHAWLKVYPVLMSLGAFCIFASTLWRPPSMIERFARIMEPDLPESGVQWT  120
            +CGSLSL+ ++H WLK+YPV MSLGA  IF+ TL +PPSMIERFARI+EPDLP SGVQWT
Sbjct  61   ICGSLSLLSHNHTWLKLYPVGMSLGALIIFSLTLIKPPSMIERFARIVEPDLPASGVQWT  120

Query  121  RKVTMIWCGFFLINASIAWCTVIWMSTQIWVIYNGFISYVLMGILLLGEFILRKRYRRLH  180
            R+VT +WC FFL NA IA  TV++ S Q+WVIYNGFISYVLMGIL LGEFILRKR++RLH
Sbjct  121  RQVTKVWCIFFLCNALIALTTVLFTSMQVWVIYNGFISYVLMGILFLGEFILRKRHQRLH  180

Query  181  HND  183
             ++
Sbjct  181  SSN  183



Lambda      K        H        a         alpha
   0.335    0.145    0.506    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 275247


  Database: d3f12b130fc8ff5f12f5f7d47f4e92a0.TrEMBL.fasta
    Posted date:  May 11, 2024  2:49 PM
  Number of letters in database: 2,231
  Number of sequences in database:  12



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40