BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 6730e4f130af495dee23637694689784.SwissProt.fasta
           1 sequences; 874 total letters



Query= ACIAD0576

Length=196
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q66613 Envelope glycoprotein B [Equine herpesvirus 2 (strain 86/87)]  38.1    2e-07


>Q66613 Envelope glycoprotein B [Equine herpesvirus 2 (strain 
86/87)]
Length=874

 Score = 38.1 bits (87),  Expect = 2e-07
 Identities = 29/78 (37%), Positives = 38/78 (49%), Gaps = 2/78 (3%)

Query  12   TPQSEQI-FKQLSQTSLVRAQFEQQKKLASLNKTFVSNGTVVFSKTNGVLWQLQRP-VQA  69
            TP  E+  F +  +      Q E QKKL  + KT   NGT    KT G L+ + +P +Q 
Sbjct  339  TPLEEEANFNETFKCIWNNTQEEIQKKLKEVEKTHRPNGTAKVYKTTGNLYIVWQPLIQI  398

Query  70   DLIVTPKKLVQKTAKTMS  87
            DL+ T  KL   T  T S
Sbjct  399  DLLDTHAKLYNLTNATAS  416


 Score = 14.2 bits (25),  Expect = 7.7
 Identities = 9/33 (27%), Positives = 16/33 (48%), Gaps = 2/33 (6%)

Query  101  TLFLQLMSGNQAVLDQHFSIAQSRITPQG--WS  131
            T FL+   G  + + ++ S  +   TP+   WS
Sbjct  173  TAFLKPADGLTSSITRYQSQPEVYATPRNLLWS  205



Lambda      K        H        a         alpha
   0.321    0.130    0.365    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 139095


  Database: 6730e4f130af495dee23637694689784.SwissProt.fasta
    Posted date:  May 20, 2024  11:33 AM
  Number of letters in database: 874
  Number of sequences in database:  1



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40