BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 295ae940c13b2f87cb53b815ad2f8d3f.SwissProt.fasta
7 sequences; 7,244 total letters
Query= ACIAD0577
Length=766
Score E
Sequences producing significant alignments: (Bits) Value
A0A3Q7JC00 Mediator of RNA polymerase II transcription subunit 25... 43.1 4e-07
Q75JU2 ATPase WRNIP1 [Dictyostelium discoideum] 40.4 3e-06
Q54VY3 Transcription factor SPT20 homolog [Dictyostelium discoideum] 39.3 6e-06
Q86AF2 Putative uncharacterized protein DDB_G0271606 [Dictyosteli... 38.9 8e-06
O31100 Solvent-resistant pump membrane transporter SrpB [Pseudomo... 37.4 2e-05
Q93PU4 Toluene efflux pump membrane transporter TtgH [Pseudomonas... 37.4 2e-05
Q54B46 Putative mediator of RNA polymerase II transcription subun... 37.0 3e-05
>A0A3Q7JC00 Mediator of RNA polymerase II transcription subunit
25 [Solanum lycopersicum]
Length=805
Score = 43.1 bits (100), Expect = 4e-07
Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query 511 IPTQDQQQQNIQRLKAIPVQVLQQYAQN----IGLTSSDVMAWQQQLDHLPLLKLQDFQQ 566
IP+Q QQQQ Q+L+A Q+ QQ Q L + QQQ PL++LQ QQ
Sbjct 661 IPSQQQQQQQQQQLQAQHPQLQQQQQQQQQHLTQLQQQPLQQLQQQQQQQPLMQLQQQQQ 720
Query 567 HPLAFLQVNPEERLVMLSGVKDNTDVLAMQNKQ 599
PL QV P+ + + ++ + MQ +Q
Sbjct 721 IPLQQSQV-PQMQQQQIHQMQQQQQIPQMQQQQ 752
Score = 38.9 bits (89), Expect = 7e-06
Identities = 42/144 (29%), Positives = 61/144 (42%), Gaps = 28/144 (19%)
Query 480 QMQRNEQTLIQHLQNLQQQGKLGSFQALGQWIPTQDQQQQNIQRLKAIPVQVLQQYAQNI 539
Q+Q+ +Q QHL LQQQ P Q QQQ Q+ P+ LQQ Q I
Sbjct 680 QLQQQQQQQQQHLTQLQQQ-------------PLQQLQQQQQQQ----PLMQLQQ-QQQI 721
Query 540 GLTSSDVMAWQQQLDHLPLLKLQDFQQHPLAFLQVNPEERLVMLSGVKDNTDVLAMQNKQ 599
L S V QQQ H ++Q QQ P Q+ ++++ + + ++ Q
Sbjct 722 PLQQSQVPQMQQQQIH----QMQQQQQIP----QMQQQQQIPQMQQQQQQQPMVGTGMNQ 773
Query 600 VTLQQPIHDLSMLFKQHRIQAQSL 623
+Q P S L Q + +Q L
Sbjct 774 TYMQGPAR--SQLMSQSQGSSQGL 795
Score = 25.0 bits (53), Expect = 0.13
Identities = 15/42 (36%), Positives = 20/42 (48%), Gaps = 1/42 (2%)
Query 478 PAQMQRNEQTLIQHLQNLQQQGKLGSFQALGQWIPTQDQQQQ 519
P Q + Q Q + +QQQ ++ Q Q IP QQQQ
Sbjct 722 PLQQSQVPQMQQQQIHQMQQQQQIPQMQQ-QQQIPQMQQQQQ 762
Score = 20.8 bits (42), Expect = 2.7
Identities = 16/74 (22%), Positives = 33/74 (45%), Gaps = 2/74 (3%)
Query 194 KLKQSPYNIDYQEKATAWIEQSKQ--QLHAMQVTSHWTGTLLFSNYGTQSAQKEISTIGL 251
+++Q + Q++ ++Q +Q Q+ Q GT + Y A+ ++ +
Sbjct 730 QMQQQQIHQMQQQQQIPQMQQQQQIPQMQQQQQQQPMVGTGMNQTYMQGPARSQLMSQSQ 789
Query 252 GSTLGLILLVWFGF 265
GS+ GL + GF
Sbjct 790 GSSQGLPITPGGGF 803
>Q75JU2 ATPase WRNIP1 [Dictyostelium discoideum]
Length=876
Score = 40.4 bits (93), Expect = 3e-06
Identities = 35/112 (31%), Positives = 50/112 (45%), Gaps = 4/112 (4%)
Query 457 YVRERFMGEQGSDYFVVRGATPAQMQRNEQTLIQHLQNLQQQGKLGSFQALGQWIPTQDQ 516
Y+ E E+ +Y + + + Q +QT Q QQQ + Q TQ Q
Sbjct 600 YLPEPIKNEKFFEYKLTCPSVKDRQQSQDQT--QRSSQQQQQQQTQPQQQTQPQQQTQQQ 657
Query 517 QQQNIQRLKAIPVQVLQQYAQNIGLTSSDVMAWQQQLDHLPLL--KLQDFQQ 566
QQ +++LK I Q+ QQ Q I SS + Q QL L + +LQ QQ
Sbjct 658 IQQQLEQLKQIQQQLEQQVQQQIQQQSSQSPSQQSQLQELQQIQQQLQQIQQ 709
Score = 27.7 bits (60), Expect = 0.020
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 12/102 (12%)
Query 445 QSMDRGLKQEDQYVRERFMGEQGSDYFVVRGATPAQMQRNEQTLIQHLQNLQQQGKLGSF 504
QS D+ + Q +++ +Q + + T Q+Q+ + L Q Q L+QQ +
Sbjct 625 QSQDQTQRSSQQQQQQQTQPQQQTQ---PQQQTQQQIQQQLEQLKQIQQQLEQQVQ---- 677
Query 505 QALGQWIPTQDQQQQNIQRLKAIPVQVLQQYAQNIGLTSSDV 546
Q + Q QQ +Q L Q +QQ Q I T+S +
Sbjct 678 QQIQQQSSQSPSQQSQLQEL-----QQIQQQLQQIQQTNSQI 714
Score = 19.2 bits (38), Expect = 8.0
Identities = 18/81 (22%), Positives = 31/81 (38%), Gaps = 2/81 (2%)
Query 39 SQDADLVKTQQYVSEQLNSRVFLVIDAKNAAQLQQATMYLRQAVAQSTLFEPLQPEVNTE 98
SQD +QQ +Q + + Q+QQ L+Q Q L + +Q ++ +
Sbjct 626 SQDQTQRSSQQQQQQQTQPQQQTQPQQQTQQQIQQQLEQLKQ--IQQQLEQQVQQQIQQQ 683
Query 99 QLGQTLYQHRAGLISPEDQQL 119
Q + + QQL
Sbjct 684 SSQSPSQQSQLQELQQIQQQL 704
>Q54VY3 Transcription factor SPT20 homolog [Dictyostelium discoideum]
Length=1402
Score = 39.3 bits (90), Expect = 6e-06
Identities = 46/159 (29%), Positives = 61/159 (38%), Gaps = 19/159 (12%)
Query 478 PAQMQRNEQTLIQHLQNLQQQGKLGSFQALGQWIPTQDQQQQNIQRLKAIPVQVLQQYAQ 537
P Q Q Q QHLQ Q Q Q Q QQQQ Q+L+ P Q+LQQ Q
Sbjct 1219 PPQPQPQPQQFAQHLQQQQMQRPQAQLQPPQILQQLQQQQQQQQQQLQ--PPQILQQQYQ 1276
Query 538 NIGLTSSDVMAWQQQLD-----HLPLLKLQDFQQHPLAFLQVNPEERLVMLSGVKDNTDV 592
+ + QQQ+ H +L Q Q L LQ ++ + N
Sbjct 1277 TL---QPQQLILQQQIHEKQNIHQQMLLQQQRNQTNLQLLQQQAQQ-------IPPNNPQ 1326
Query 593 LAMQNKQVTLQQPIHDLSMLFKQHRIQAQSLFMYALLAL 631
L N+Q QQ + Q +Q+QS+ L L
Sbjct 1327 LLQTNQQ--QQQFVTQQIQHQHQQLLQSQSIIQQLQLQL 1363
Score = 37.7 bits (86), Expect = 2e-05
Identities = 47/182 (26%), Positives = 72/182 (40%), Gaps = 28/182 (15%)
Query 442 RNLQSMDRGLKQEDQYVRERFMGEQGSDYFVVRGATPAQMQRNEQTLIQHLQNLQQQGKL 501
+N Q+ + +Q+ Q +++ +Q T Q+Q+N+Q Q Q +QQQ
Sbjct 991 QNQQNQQQNQQQQQQQNQQQQQNQQTQQQ-----QTQQQIQQNQQ---QPTQQIQQQ--- 1039
Query 502 GSFQALGQWIPTQDQQQQNIQRLKAIPVQVLQQYAQNIGLTSSDVMAWQQQLDHLPLLKL 561
Q Q QQN Q+L+ Q LQQ Q I + QQQ+ L +L
Sbjct 1040 -----------NQQQIQQNQQQLQQ---QQLQQQQQQI--QQQQIQLQQQQIQQKQLQQL 1083
Query 562 QDFQQHPLAFLQVNPEERLVMLSGVKDNTDVLAMQNKQVTLQQPIHDLSMLFKQHRIQAQ 621
Q QQ Q +++ + Q +Q QQ + L Q +IQ Q
Sbjct 1084 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQLQQTRNLQPQ-QIQTQ 1142
Query 622 SL 623
L
Sbjct 1143 PL 1144
Score = 36.6 bits (83), Expect = 4e-05
Identities = 42/188 (22%), Positives = 73/188 (39%), Gaps = 31/188 (16%)
Query 434 FLNSNDDIRNLQSMDRGLKQEDQYVRERFMGEQGSDYFVVRGATPAQMQRNEQTLIQHLQ 493
++++ + Q + L+Q+ Q +++ +Q + + Q Q+N+Q Q+ Q
Sbjct 915 YIHNQQQLNQQQQLQYHLQQQKQQQQQQQQQQQQQNQ--QQQQQNQQQQQNQQNQQQNQQ 972
Query 494 NLQQQGKLGSFQALGQWIPTQDQQQQNIQRLKAIPVQVLQQYAQNIGLTSSDVMAWQQQL 553
QQQ + Q Q Q QQN Q+ + Q QQ QN QQ
Sbjct 973 QNQQQNQ----QQQQQQNQQNQQNQQNQQQNQQQQQQQNQQQQQN-----------QQTQ 1017
Query 554 DHLPLLKLQDFQQHPLAFLQVNPEERLVMLSGVKDNTDVLAMQNKQVTLQQPIHDLSMLF 613
++Q QQ P +Q ++++ QN+Q QQ +
Sbjct 1018 QQQTQQQIQQNQQQPTQQIQQQNQQQI--------------QQNQQQLQQQQLQQQQQQI 1063
Query 614 KQHRIQAQ 621
+Q +IQ Q
Sbjct 1064 QQQQIQLQ 1071
Score = 34.3 bits (77), Expect = 2e-04
Identities = 41/147 (28%), Positives = 57/147 (39%), Gaps = 23/147 (16%)
Query 475 GATPAQMQRNEQTLIQHLQNLQQQGKLGSFQALGQWIPTQDQQQQNIQRLKAIPVQVLQQ 534
G P +Q + Q LQ LQQ P QQQQ Q+ P QQ
Sbjct 1181 GVQPQSQLTIKQPIQQPLQPLQQPQ------------PQPQQQQQQQQQQPPQPQPQPQQ 1228
Query 535 YAQNIGLTSSDVMAWQQQLDHLPLLKLQDFQQHPLAFLQVNPEERLVMLSGVKDNTDVLA 594
+AQ+ L + Q QL P + Q QQ Q+ P + L
Sbjct 1229 FAQH--LQQQQMQRPQAQLQP-PQILQQLQQQQQQQQQQLQPPQIL--------QQQYQT 1277
Query 595 MQNKQVTLQQPIHDLSMLFKQHRIQAQ 621
+Q +Q+ LQQ IH+ + +Q +Q Q
Sbjct 1278 LQPQQLILQQQIHEKQNIHQQMLLQQQ 1304
Score = 32.7 bits (73), Expect = 6e-04
Identities = 32/125 (26%), Positives = 44/125 (35%), Gaps = 0/125 (0%)
Query 480 QMQRNEQTLIQHLQNLQQQGKLGSFQALGQWIPTQDQQQQNIQRLKAIPVQVLQQYAQNI 539
Q Q+ +Q Q Q QQQ + Q Q Q QQQQ Q P Q+ Q Q
Sbjct 1088 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQLQQTRNLQPQQIQTQPLQQP 1147
Query 540 GLTSSDVMAWQQQLDHLPLLKLQDFQQHPLAFLQVNPEERLVMLSGVKDNTDVLAMQNKQ 599
+ M Q Q +Q P+ V P+ +L + ++ L Q
Sbjct 1148 PNQMAQSMISPQSTPSTSPSPQQQYQTTPVLQAGVQPQSQLTIKQPIQQPLQPLQQPQPQ 1207
Query 600 VTLQQ 604
QQ
Sbjct 1208 PQQQQ 1212
Score = 31.2 bits (69), Expect = 0.002
Identities = 37/146 (25%), Positives = 53/146 (36%), Gaps = 12/146 (8%)
Query 436 NSNDDIRNLQSMDRGLKQEDQYVRERFMGEQGSDYFVVRGATPAQMQRNEQTLIQH-LQN 494
N + Q + + + Q +++ Q ++ Q+Q+N+Q L Q LQ
Sbjct 999 NQQQQQQQNQQQQQNQQTQQQQTQQQIQQNQQQPTQQIQQQNQQQIQQNQQQLQQQQLQQ 1058
Query 495 LQQQGKLGSFQALGQWIPT--------QDQQQQNIQRLKAIPVQVLQQYAQNIGLTSSDV 546
QQQ + Q Q I Q QQQQ Q+ + Q QQ Q
Sbjct 1059 QQQQIQQQQIQLQQQQIQQKQLQQLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 1118
Query 547 MAWQQQLDHLPL---LKLQDFQQHPL 569
QQQ L L+ Q Q PL
Sbjct 1119 QQQQQQQQQLQQTRNLQPQQIQTQPL 1144
Score = 25.8 bits (55), Expect = 0.081
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 5/46 (11%)
Query 480 QMQRNEQTLIQHLQ-NLQQQGKLGSFQALGQWIPTQDQQQQNIQRL 524
Q+Q ++Q +Q LQ LQQQ Q Q Q QQQQ QR+
Sbjct 1360 QLQLHQQQQLQQLQAQLQQQTSPNIIQQQQQ----QQQQQQQQQRI 1401
Score = 24.3 bits (51), Expect = 0.24
Identities = 35/162 (22%), Positives = 60/162 (37%), Gaps = 12/162 (7%)
Query 69 AQLQQATMYLRQAVAQSTLFEPLQPEVNTEQLGQTLYQHRAGLISP-------EDQQLLD 121
AQLQ + + Q + LQP +Q QTL + L Q LL
Sbjct 1243 AQLQPPQILQQLQQQQQQQQQQLQPPQILQQQYQTLQPQQLILQQQIHEKQNIHQQMLLQ 1302
Query 122 DHDYQSLTEKSLMQLFTPGLPVNAESL---KHDPLMLFSRYVLASSQHLQNSQVELENGF 178
Q T L+Q +P N L ++ + Q L SQ ++
Sbjct 1303 QQRNQ--TNLQLLQQQAQQIPPNNPQLLQTNQQQQQFVTQQIQHQHQQLLQSQSIIQQLQ 1360
Query 179 ATIHDADKISRLFTLKLKQSPYNIDYQEKATAWIEQSKQQLH 220
+H ++ +L +Q+ NI Q++ +Q +Q+++
Sbjct 1361 LQLHQQQQLQQLQAQLQQQTSPNIIQQQQQQQQQQQQQQRIN 1402
Score = 23.5 bits (49), Expect = 0.41
Identities = 23/77 (30%), Positives = 31/77 (40%), Gaps = 6/77 (8%)
Query 476 ATPAQMQRNEQTLIQHLQNLQQQGKLGSFQALGQWIPTQDQQQQNIQRLKAIPVQVLQQY 535
++ AQ R + I + Q L QQ Q L + Q QQQQ Q+ + Q QQ
Sbjct 903 SSQAQEIRKKAEYIHNQQQLNQQ------QQLQYHLQQQKQQQQQQQQQQQQQNQQQQQQ 956
Query 536 AQNIGLTSSDVMAWQQQ 552
Q + QQQ
Sbjct 957 NQQQQQNQQNQQQNQQQ 973
Score = 21.2 bits (43), Expect = 2.1
Identities = 13/42 (31%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query 185 DKISRLFTLKLKQ---SPYNIDYQEKATAWIEQSKQQLHAMQ 223
DKIS+ F + Q +PY I+ ++ + +Q +QQ Q
Sbjct 294 DKISKDFLNSISQGKLTPYIINILDQLSEQNDQKQQQQQQQQ 335
Score = 20.0 bits (40), Expect = 4.7
Identities = 16/46 (35%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Query 494 NLQQQGKLGSF--QALGQWIPTQDQQQQNIQRLKAIPVQVLQQYAQ 537
N QGKL + L Q DQ+QQ Q+ + Q QQ Q
Sbjct 302 NSISQGKLTPYIINILDQLSEQNDQKQQQQQQQQQQQQQQQQQQQQ 347
Score = 19.2 bits (38), Expect = 8.1
Identities = 15/43 (35%), Positives = 19/43 (44%), Gaps = 0/43 (0%)
Query 477 TPAQMQRNEQTLIQHLQNLQQQGKLGSFQALGQWIPTQDQQQQ 519
TP + +Q Q+ Q QQQ + Q Q Q QQQQ
Sbjct 310 TPYIINILDQLSEQNDQKQQQQQQQQQQQQQQQQQQQQQQQQQ 352
Score = 19.2 bits (38), Expect = 8.1
Identities = 14/40 (35%), Positives = 17/40 (43%), Gaps = 0/40 (0%)
Query 482 QRNEQTLIQHLQNLQQQGKLGSFQALGQWIPTQDQQQQNI 521
Q +EQ + Q QQQ + Q Q Q QQ NI
Sbjct 319 QLSEQNDQKQQQQQQQQQQQQQQQQQQQQQQQQQQQTNNI 358
Score = 19.2 bits (38), Expect = 8.1
Identities = 14/43 (33%), Positives = 18/43 (42%), Gaps = 6/43 (14%)
Query 482 QRNEQTLIQHLQNLQQQGKLGSFQALGQWIPTQDQQQQNIQRL 524
++N+Q Q Q QQQ Q Q Q QQQQ +
Sbjct 322 EQNDQKQQQQQQQQQQQ------QQQQQQQQQQQQQQQQTNNI 358
>Q86AF2 Putative uncharacterized protein DDB_G0271606 [Dictyostelium
discoideum]
Length=1212
Score = 38.9 bits (89), Expect = 8e-06
Identities = 35/104 (34%), Positives = 50/104 (48%), Gaps = 14/104 (13%)
Query 436 NSNDDIRNLQSMDRGLKQEDQYVRERFMGEQGSDYFVVRGATPAQMQRNEQTLIQHLQNL 495
N N++I N Q + Q+ QY +++ +Q + P Q+Q+ QHLQ L
Sbjct 1082 NINNNINNQQQL---YIQQQQYSQQQQQQQQNPQQQNPQQQNPQQLQQQ-----QHLQQL 1133
Query 496 QQQGKLGSFQALGQWIPTQDQQQQNIQRLKAIPVQVLQQYAQNI 539
QQQ L Q L Q Q QQQQ Q+ + + Q+ Q QNI
Sbjct 1134 QQQ--LLQQQLLQQ----QQQQQQQQQQQQQMQQQIQQPPQQNI 1171
Score = 38.1 bits (87), Expect = 1e-05
Identities = 37/143 (26%), Positives = 57/143 (40%), Gaps = 12/143 (8%)
Query 479 AQMQRNEQTLIQHLQNLQQQGKLGSFQALGQWIPTQDQQQQNIQRLKAIPVQVLQQYAQN 538
AQ+Q+ + +IQ +Q +QQ ++ Q +P Q QQQQ Q Q QQ AQ
Sbjct 498 AQIQQQQAIIIQQMQQMQQNQQIQQ----NQQLPQQQQQQQQQQ-------QQQQQQAQQ 546
Query 539 IGLTSSDVMAWQQQLDHLPLLKLQDFQQHPLAFLQVNPEERLVMLSGVKDNTDVLAMQNK 598
+ L + QQQ L + Q QQ Q +++ + + Q +
Sbjct 547 L-LLQQQLQQQQQQQQQQQLQQAQQAQQQQQQQQQQQAQQQQQQQAQQQQQQQQQQQQQQ 605
Query 599 QVTLQQPIHDLSMLFKQHRIQAQ 621
Q QQ +Q + Q Q
Sbjct 606 QQQQQQQQQQQQQQQQQQQQQQQ 628
Score = 37.0 bits (84), Expect = 3e-05
Identities = 34/136 (25%), Positives = 55/136 (40%), Gaps = 8/136 (6%)
Query 435 LNSNDDIRNLQSMDRGLKQEDQYVRERFMGEQGSDYFVVRGATPAQMQRNEQTLIQHLQN 494
+ N I+ Q + + +Q+ Q +++ +Q + +++ Q Q+ +Q +Q Q
Sbjct 514 MQQNQQIQQNQQLPQQQQQQQQQQQQQ---QQQAQQLLLQQQLQQQQQQQQQQQLQQAQQ 570
Query 495 LQQQGKLGSFQALGQWIPTQDQQQQNIQRLKAIPVQVLQQYAQNIGLTSSDVMAWQQQLD 554
QQQ + Q Q Q QQQQ Q+ + Q QQ Q QQQ
Sbjct 571 AQQQQQQQQQQQAQQQQQQQAQQQQQQQQQQQQQQQQQQQQQQ-----QQQQQQQQQQQQ 625
Query 555 HLPLLKLQDFQQHPLA 570
+ Q QQ P A
Sbjct 626 QQQQQQQQQAQQQPQA 641
Score = 35.4 bits (80), Expect = 9e-05
Identities = 45/188 (24%), Positives = 69/188 (37%), Gaps = 17/188 (9%)
Query 442 RNLQSMDRGLKQEDQYVRERFMGEQGSDYFVVRGATPAQMQRNEQTLIQHLQNLQQQGKL 501
+ LQ + +Q+ Q +++ +Q AQ Q+ +Q Q Q QQQ +
Sbjct 563 QQLQQAQQAQQQQQQQQQQQAQQQQQQQ---------AQQQQQQQQQQQQQQQQQQQQQQ 613
Query 502 GSFQALGQWIPTQDQQQQNIQRLKAIPVQVLQQYAQNIGLTSSDVMAW-----QQQLDHL 556
Q Q Q QQQQ Q + Q QQ AQ QQL
Sbjct 614 QQQQQQQQQQQQQQQQQQQQQAQQQPQAQQSQQQAQQQQQNQQQPQQLNQNPPNQQLPQQ 673
Query 557 P--LLKLQDFQQHPL-AFLQVNPEERLVMLSGVKDNTDVLAMQNKQVTLQQPIHDLSMLF 613
P + + Q QQH LQ ++++ L ++ Q +Q QQ +
Sbjct 674 PNQITQQQQQQQHQTNQILQNQQSQQILQLQQLQQQQQQQQQQQQQQQQQQQQQQQQLQQ 733
Query 614 KQHRIQAQ 621
+Q + Q Q
Sbjct 734 QQQQQQQQ 741
Score = 33.5 bits (75), Expect = 4e-04
Identities = 37/142 (26%), Positives = 56/142 (39%), Gaps = 14/142 (10%)
Query 480 QMQRNEQTLIQHLQNLQQQGKLGSFQALGQWIPTQDQQQQNIQRLKAIPVQVLQQYAQNI 539
Q Q+ + L Q LQQQ + Q + Q Q QQ Q+ Q L+ Y Q+
Sbjct 408 QQQQQQAQLQQQQAQLQQQQQAQLQQQQQAQLQQQQQAQQQAQQQAQQQQQQLKIYQQHF 467
Query 540 GLTSSDVMAWQQQLDHLPLLKLQDFQQHPLAFLQVNPEERLVMLSGVKDNTDVLAMQNKQ 599
G QL H + LQ Q+P Q+N L + ++ ++ Q +Q
Sbjct 468 G-----------QLQH-QIHMLQQQPQNPQTQQQIN--GLLQQQAQIQQQQAIIIQQMQQ 513
Query 600 VTLQQPIHDLSMLFKQHRIQAQ 621
+ Q I L +Q + Q Q
Sbjct 514 MQQNQQIQQNQQLPQQQQQQQQ 535
Score = 33.5 bits (75), Expect = 4e-04
Identities = 44/185 (24%), Positives = 71/185 (38%), Gaps = 13/185 (7%)
Query 444 LQSMDRGLKQEDQYVRERFMGEQGSDYFVVRGATPAQMQRNEQTLIQHLQNLQQ-QGKLG 502
LQ L+Q+ Q ++ Q + Q Q+ +Q L + Q+ Q Q ++
Sbjct 416 LQQQQAQLQQQQQAQLQQQQQAQLQQQQQAQQQAQQQAQQQQQQLKIYQQHFGQLQHQIH 475
Query 503 SFQALGQWIPTQDQ------QQQNIQRLKAIPVQVLQQYAQNIGLTSSDVMAWQQQLDHL 556
Q Q TQ Q QQ IQ+ +AI +Q +QQ QN + + + QQQ
Sbjct 476 MLQQQPQNPQTQQQINGLLQQQAQIQQQQAIIIQQMQQMQQNQQIQQNQQLPQQQQQQQ- 534
Query 557 PLLKLQDFQQHPLAFLQVNPEERLVMLSGVKDNTDVLAMQNKQVTLQQPIHDLSMLFKQH 616
Q QQ Q+ +++L + + Q Q QQ + +Q
Sbjct 535 -----QQQQQQQQQAQQLLLQQQLQQQQQQQQQQQLQQAQQAQQQQQQQQQQQAQQQQQQ 589
Query 617 RIQAQ 621
+ Q Q
Sbjct 590 QAQQQ 594
Score = 30.8 bits (68), Expect = 0.002
Identities = 32/125 (26%), Positives = 46/125 (37%), Gaps = 5/125 (4%)
Query 456 QYVRERFMGEQGSDYFVVRGATPAQMQRNEQTLIQHLQNLQQQGKLGSFQALGQWIPTQD 515
Q ++++ +Q + A Q Q+ +Q Q Q QQ + Q Q Q
Sbjct 551 QQLQQQQQQQQQQQLQQAQQAQQQQQQQQQQQAQQQQQQQAQQQQQQQQQQQQQQQQQQQ 610
Query 516 QQQQNIQRLKAIPVQVLQQYAQNIGLTSSDVMAWQQQLDHLPLLKLQDFQQHPLAFLQVN 575
QQQQ Q+ + Q QQ Q QQQ + Q QQ P Q
Sbjct 611 QQQQQQQQQQQQQQQQQQQQQQQQAQQQPQAQQSQQQAQ-----QQQQNQQQPQQLNQNP 665
Query 576 PEERL 580
P ++L
Sbjct 666 PNQQL 670
Score = 30.4 bits (67), Expect = 0.003
Identities = 22/54 (41%), Positives = 28/54 (52%), Gaps = 3/54 (6%)
Query 480 QMQRNEQTLIQHLQNLQQQGKLGSFQALGQWIPTQDQ---QQQNIQRLKAIPVQ 530
Q Q+ +Q L+Q Q LQQQ +L Q Q + Q Q QQQN +A VQ
Sbjct 72 QQQQQQQQLLQQQQILQQQQQLLQLQQQQQNLIKQQQHQAQQQNFLHPQAQQVQ 125
Score = 30.4 bits (67), Expect = 0.003
Identities = 32/123 (26%), Positives = 46/123 (37%), Gaps = 7/123 (6%)
Query 435 LNSNDDIRNLQSMDRGLKQEDQYVRER----FMGEQGSDYFVVRGATPAQMQRNEQTLIQ 490
LN N + L + Q+ Q + + +Q ++ Q Q+ +Q Q
Sbjct 661 LNQNPPNQQLPQQPNQITQQQQQQQHQTNQILQNQQSQQILQLQQLQQQQQQQQQQQQQQ 720
Query 491 HLQNLQQQGKLGSFQALGQWIPTQDQQQQNIQRLKAIPVQVLQQYAQNIGLTSSDVMAWQ 550
Q QQQ +L Q Q Q QQQQ QR + VQ Q N L + W
Sbjct 721 QQQQQQQQQQLQQQQQQQQ---QQQQQQQQQQRQQPNQVQPNQPIDYNKKLELLNHPIWG 777
Query 551 QQL 553
+ L
Sbjct 778 KVL 780
Score = 26.2 bits (56), Expect = 0.061
Identities = 20/66 (30%), Positives = 27/66 (41%), Gaps = 2/66 (3%)
Query 514 QDQQQQNIQRLKAIPVQVL--QQYAQNIGLTSSDVMAWQQQLDHLPLLKLQDFQQHPLAF 571
Q Q+QQ Q++ P+Q+L QQ Q L QQQ L + QQ A
Sbjct 387 QQQRQQQQQQIPQQPMQLLLQQQQQQQAQLQQQQAQLQQQQQAQLQQQQQAQLQQQQQAQ 446
Query 572 LQVNPE 577
Q +
Sbjct 447 QQAQQQ 452
Score = 25.4 bits (54), Expect = 0.11
Identities = 34/114 (30%), Positives = 47/114 (41%), Gaps = 19/114 (17%)
Query 478 PAQMQRNEQTLIQHLQNLQQQGKLGSFQALGQWIPTQDQQQQNIQRLKAIPVQVLQQYAQ 537
P Q Q Q + HLQ QQQ + Q L Q QQQQ +Q LQQ Q
Sbjct 55 PQQPQPQSQQPL-HLQQQQQQQQQ---QQLLQQQQILQQQQQLLQ---------LQQQQQ 101
Query 538 NIGLTSSDVMAWQQQLDHLPLLKLQDFQQHPLAFLQVNPEERLVMLSGVKDNTD 591
N+ + A QQ H ++Q Q LQ P+ + ++ V +N +
Sbjct 102 NL-IKQQQHQAQQQNFLHPQAQQVQSQLQ-----LQSQPQPQPQPVNNVNNNNN 149
Score = 25.4 bits (54), Expect = 0.11
Identities = 28/81 (35%), Positives = 31/81 (38%), Gaps = 5/81 (6%)
Query 477 TPAQMQRNEQTLIQHLQNLQQQGKLGSFQALGQWIPTQDQQQQNIQRLKAIPVQVLQQYA 536
T Q Q+ QT Q LQN Q Q L L Q Q QQQQ Q+ + Q QQ
Sbjct 678 TQQQQQQQHQTN-QILQNQQSQQIL----QLQQLQQQQQQQQQQQQQQQQQQQQQQQQLQ 732
Query 537 QNIGLTSSDVMAWQQQLDHLP 557
Q QQQ P
Sbjct 733 QQQQQQQQQQQQQQQQQRQQP 753
Score = 25.0 bits (53), Expect = 0.14
Identities = 34/147 (23%), Positives = 53/147 (36%), Gaps = 13/147 (9%)
Query 445 QSMDRGLKQEDQYVRERFMGEQGSDYFVVRGATPAQMQRNEQTLIQHLQNLQQQGKLGSF 504
Q + +Q+ Q +++ +Q + Q Q+++Q Q QN QQ +L
Sbjct 605 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAQQQPQAQQSQQQAQQQQQNQQQPQQLNQ- 663
Query 505 QALGQWIP------TQDQQQQ------NIQRLKAIPVQVLQQYAQNIGLTSSDVMAWQQQ 552
Q +P TQ QQQQ +Q ++ + LQQ Q QQQ
Sbjct 664 NPPNQQLPQQPNQITQQQQQQQHQTNQILQNQQSQQILQLQQLQQQQQQQQQQQQQQQQQ 723
Query 553 LDHLPLLKLQDFQQHPLAFLQVNPEER 579
Q QQ Q ++R
Sbjct 724 QQQQQQQLQQQQQQQQQQQQQQQQQQR 750
Score = 24.6 bits (52), Expect = 0.18
Identities = 27/114 (24%), Positives = 46/114 (40%), Gaps = 13/114 (11%)
Query 505 QALGQWIPTQDQQQQNIQRLKAIPVQVLQQYAQNIGLTSSDVMAWQQQL--------DHL 556
Q+ Q P QQQ I +P Q Q Q + L QQQL
Sbjct 37 QSPPQQTPPSQPQQQPI-----LPQQPQPQSQQPLHLQQQQQQQQQQQLLQQQQILQQQQ 91
Query 557 PLLKLQDFQQHPLAFLQVNPEERLVMLSGVKDNTDVLAMQNKQVTLQQPIHDLS 610
LL+LQ QQ+ + Q +++ + + L +Q++ QP+++++
Sbjct 92 QLLQLQQQQQNLIKQQQHQAQQQNFLHPQAQQVQSQLQLQSQPQPQPQPVNNVN 145
Score = 23.9 bits (50), Expect = 0.31
Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 2/71 (3%)
Query 65 AKNAAQLQQATMYLRQAVAQSTLFEPLQPEVNTEQLGQTLYQHRAGLISPEDQQLLDDHD 124
A+ Q QQ L Q L P QP T+Q Q +Q L + + QQ+L
Sbjct 648 AQQQQQNQQQPQQLNQNPPNQQL--PQQPNQITQQQQQQQHQTNQILQNQQSQQILQLQQ 705
Query 125 YQSLTEKSLMQ 135
Q ++ Q
Sbjct 706 LQQQQQQQQQQ 716
Score = 23.5 bits (49), Expect = 0.41
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 2/79 (3%)
Query 480 QMQRNEQTL-IQHLQNLQQQGKLGSFQALGQWIPTQDQ-QQQNIQRLKAIPVQVLQQYAQ 537
Q Q+++Q L +Q LQ QQQ + Q Q Q Q QQQ Q+ + Q QQ Q
Sbjct 693 QNQQSQQILQLQQLQQQQQQQQQQQQQQQQQQQQQQQQLQQQQQQQQQQQQQQQQQQRQQ 752
Query 538 NIGLTSSDVMAWQQQLDHL 556
+ + + + ++L+ L
Sbjct 753 PNQVQPNQPIDYNKKLELL 771
Score = 22.3 bits (46), Expect = 0.92
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 12/58 (21%)
Query 487 TLIQHLQNLQQQGKLGSFQALGQWIPTQDQQQQNIQRLKAIPVQVLQQYAQNIGLTSS 544
+L+Q Q LQQQ + Q QQQ Q+L Q QQ + N L SS
Sbjct 174 SLVQQQQLLQQQAQ------------QQLLQQQQHQQLLLQQQQAQQQSSLNNSLNSS 219
Score = 21.6 bits (44), Expect = 1.6
Identities = 34/195 (17%), Positives = 67/195 (34%), Gaps = 14/195 (7%)
Query 28 QTNIFALLPELSQDADLVKTQQYVSEQLNSRVFLVIDAKNAAQL--QQATMYLRQAVAQS 85
Q I + ++ Q+ + + QQ +Q + + A QL QQ +Q Q
Sbjct 504 QAIIIQQMQQMQQNQQIQQNQQLPQQQQQQQQQQQQQQQQAQQLLLQQQLQQQQQQQQQQ 563
Query 86 TLFEPLQPEVNTEQLGQTLYQHRAGLISPEDQQLLDDHDYQSLTEKSLMQLFTPGLPVNA 145
L + Q + +Q Q Q + + + QQ Q ++ Q
Sbjct 564 QLQQAQQAQQQQQQQQQQQAQQQQQQQAQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 623
Query 146 ESLKHDPLMLFSRYVLASSQHLQNSQVELENGFATIHDADKISRLFTLKLKQSPYNIDYQ 205
+ + ++ + Q Q +Q + +N + +L Q+P N
Sbjct 624 QQQQQQQQQQQAQQQPQAQQSQQQAQQQQQN------------QQQPQQLNQNPPNQQLP 671
Query 206 EKATAWIEQSKQQLH 220
++ +Q +QQ H
Sbjct 672 QQPNQITQQQQQQQH 686
Score = 21.6 bits (44), Expect = 1.6
Identities = 21/78 (27%), Positives = 31/78 (40%), Gaps = 2/78 (3%)
Query 514 QDQQQQNIQRLKAIPVQVLQQYAQNIGLTSSDVMAWQQQL--DHLPLLKLQDFQQHPLAF 571
Q QQQQ + + Q QQ Q L QQQL + Q QQ
Sbjct 1103 QQQQQQQNPQQQNPQQQNPQQLQQQQHLQQLQQQLLQQQLLQQQQQQQQQQQQQQQMQQQ 1162
Query 572 LQVNPEERLVMLSGVKDN 589
+Q P++ + ++ + DN
Sbjct 1163 IQQPPQQNIEPINQLSDN 1180
Score = 20.0 bits (40), Expect = 4.7
Identities = 9/23 (39%), Positives = 14/23 (61%), Gaps = 0/23 (0%)
Query 34 LLPELSQDADLVKTQQYVSEQLN 56
LL Q +L+K QQ+ ++Q N
Sbjct 93 LLQLQQQQQNLIKQQQHQAQQQN 115
>O31100 Solvent-resistant pump membrane transporter SrpB [Pseudomonas
putida]
Length=1049
Score = 37.4 bits (85), Expect = 2e-05
Identities = 39/170 (23%), Positives = 69/170 (41%), Gaps = 30/170 (18%)
Query 622 SLFMYALLALAVGLGLIYGWRSVFPLVLPVSLALLTTFAIQAWLGVEINLFSIMGTFLIV 681
++F +L V + +R+ L V + LL TFA+ + G+ IN+ ++ L +
Sbjct 343 TIFEAVVLVFLVMYLFLQSFRATLIPTLAVPVVLLATFALLPYFGLNINVLTMYAMVLAI 402
Query 682 GIGVDYAIFY-----RHGHDH----------------PQVVGMALFLCMMSTLLGFGLLS 720
G+ VD AI R HD +VG+ + L + + F S
Sbjct 403 GLLVDDAIVVVENVERLMHDEGLSPLEATRKSMDQISGALVGIGMVLSAVFVPMAFFGGS 462
Query 721 LSHTY------AIHCFGLTVLFGVIFSFIYATLFTRADEQHGVISHYQSK 764
Y + C GL++L ++F+ +A E + SH++ K
Sbjct 463 AGIIYQQFAITIVVCMGLSILVALVFTPALCVTILKAPEGN---SHHERK 509
Score = 27.7 bits (60), Expect = 0.020
Identities = 30/142 (21%), Positives = 63/142 (44%), Gaps = 10/142 (7%)
Query 257 LILLVWFGFRSFRPLLTEFIAVSTGSLVAFAVTHWVFGEIHLMTLVFGASLIGVCVDFSF 316
+ L+++ +SFR L +AV L FA+ + I+++T+ IG+ VD +
Sbjct 351 VFLVMYLFLQSFRATLIPTLAVPVVLLATFALLPYFGLNINVLTMYAMVLAIGLLVDDAI 410
Query 317 YFMAMQSQHRNITGFEVLKPLLPSL--FMGLMT---TVVAYVFLSFTPFPG-----FKQI 366
+ + + G L+ S+ G + V++ VF+ F G ++Q
Sbjct 411 VVVENVERLMHDEGLSPLEATRKSMDQISGALVGIGMVLSAVFVPMAFFGGSAGIIYQQF 470
Query 367 AVFSIVGLVSAWITSILLLPRL 388
A+ +V + + + +++ P L
Sbjct 471 AITIVVCMGLSILVALVFTPAL 492
>Q93PU4 Toluene efflux pump membrane transporter TtgH [Pseudomonas
putida (strain DOT-T1E)]
Length=1049
Score = 37.4 bits (85), Expect = 2e-05
Identities = 39/170 (23%), Positives = 69/170 (41%), Gaps = 30/170 (18%)
Query 622 SLFMYALLALAVGLGLIYGWRSVFPLVLPVSLALLTTFAIQAWLGVEINLFSIMGTFLIV 681
++F +L V + +R+ L V + LL TFA+ + G+ IN+ ++ L +
Sbjct 343 TIFEAVVLVFLVMYLFLQSFRATLIPTLAVPVVLLATFALLPYFGLNINVLTMYAMVLAI 402
Query 682 GIGVDYAIFY-----RHGHDH----------------PQVVGMALFLCMMSTLLGFGLLS 720
G+ VD AI R HD +VG+ + L + + F S
Sbjct 403 GLLVDDAIVVVENVERLMHDEGLSPLEATRKSMDQISGALVGIGMVLSAVFVPMAFFGGS 462
Query 721 LSHTY------AIHCFGLTVLFGVIFSFIYATLFTRADEQHGVISHYQSK 764
Y + C GL++L ++F+ +A E + SH++ K
Sbjct 463 AGIIYQQFAITIVVCMGLSILVALVFTPALCVTILKAPEGN---SHHERK 509
Score = 27.7 bits (60), Expect = 0.020
Identities = 30/142 (21%), Positives = 63/142 (44%), Gaps = 10/142 (7%)
Query 257 LILLVWFGFRSFRPLLTEFIAVSTGSLVAFAVTHWVFGEIHLMTLVFGASLIGVCVDFSF 316
+ L+++ +SFR L +AV L FA+ + I+++T+ IG+ VD +
Sbjct 351 VFLVMYLFLQSFRATLIPTLAVPVVLLATFALLPYFGLNINVLTMYAMVLAIGLLVDDAI 410
Query 317 YFMAMQSQHRNITGFEVLKPLLPSL--FMGLMT---TVVAYVFLSFTPFPG-----FKQI 366
+ + + G L+ S+ G + V++ VF+ F G ++Q
Sbjct 411 VVVENVERLMHDEGLSPLEATRKSMDQISGALVGIGMVLSAVFVPMAFFGGSAGIIYQQF 470
Query 367 AVFSIVGLVSAWITSILLLPRL 388
A+ +V + + + +++ P L
Sbjct 471 AITIVVCMGLSILVALVFTPAL 492
>Q54B46 Putative mediator of RNA polymerase II transcription subunit
15 [Dictyostelium discoideum]
Length=851
Score = 37.0 bits (84), Expect = 3e-05
Identities = 51/189 (27%), Positives = 74/189 (39%), Gaps = 15/189 (8%)
Query 435 LNSNDDIRNLQSMDRGLKQEDQYVRERFMGEQGSDYFVVRGATPAQMQRNEQTLIQHLQN 494
+N+N++ N + + + ++ + TP Q Q +Q QH
Sbjct 175 INNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTVYAQPLTP-QQQIQQQQHQQHQLY 233
Query 495 LQQQGKLGSF-QALGQWIPTQDQQQQNIQRLKAIPVQVLQQYAQNIGLTSSDVMAWQQQL 553
LQQQ +L Q Q PT QQ QN Q P Q QQ Q QQQ+
Sbjct 234 LQQQQQLQRLAQQNQQQQPTIMQQVQNQQ-----PTQQQQQQQQQQQQQQQQQQLNQQQI 288
Query 554 DHLPLLKLQDFQQHPLAFLQVNPEERLVMLSGVKDNTDVLAMQNKQVTLQQPIHDLSMLF 613
+ + + Q QQ Q ++ + M SGV N QN +T QQ L+
Sbjct 289 NQIKQQQQQQQQQ------QQQHQQPVQMPSGVTTNKQSPQPQNTPLTPQQQQQLLAA-- 340
Query 614 KQHRIQAQS 622
+Q QAQ+
Sbjct 341 QQSHAQAQA 349
Score = 21.9 bits (45), Expect = 1.2
Identities = 12/31 (39%), Positives = 18/31 (58%), Gaps = 0/31 (0%)
Query 496 QQQGKLGSFQALGQWIPTQDQQQQNIQRLKA 526
QQQ L + Q+ Q Q+QQ QN +R+ +
Sbjct 333 QQQQLLAAQQSHAQAQANQNQQLQNPKRISS 363
Score = 20.0 bits (40), Expect = 4.6
Identities = 8/26 (31%), Positives = 15/26 (58%), Gaps = 0/26 (0%)
Query 193 LKLKQSPYNIDYQEKATAWIEQSKQQ 218
L L+ + + I + K+T ++ KQQ
Sbjct 718 LDLENAKFFIQFSTKSTLLLKSKKQQ 743
Lambda K H a alpha
0.326 0.138 0.411 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 4864920
Database: 295ae940c13b2f87cb53b815ad2f8d3f.SwissProt.fasta
Posted date: Jun 2, 2024 5:30 AM
Number of letters in database: 7,244
Number of sequences in database: 7
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
