BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 73b84faf86442d9541f3e57ce87b13f2.SwissProt.fasta
16 sequences; 1,807 total letters
Query= ACIAD0589
Length=110
Score E
Sequences producing significant alignments: (Bits) Value
P0ADZ8 Sec translocon accessory complex subunit YajC [Escherichia... 101 5e-33
P0ADZ9 Sec translocon accessory complex subunit YajC [Escherichia... 101 5e-33
P0ADZ7 Sec translocon accessory complex subunit YajC [Escherichia... 101 5e-33
P0AE00 Sec translocon accessory complex subunit YajC [Shigella fl... 101 5e-33
P57234 Sec translocon accessory complex subunit YajC [Buchnera ap... 89.4 2e-28
Q8KA08 Sec translocon accessory complex subunit YajC [Buchnera ap... 86.7 3e-27
P44592 Sec translocon accessory complex subunit YajC [Haemophilus... 85.5 6e-27
Q89AV7 Sec translocon accessory complex subunit YajC [Buchnera ap... 82.8 1e-25
P0A4Q2 Sec translocon accessory complex subunit YajC [Brucella su... 62.4 9e-18
P0A4Q1 Sec translocon accessory complex subunit YajC [Brucella me... 62.4 9e-18
P0C120 Sec translocon accessory complex subunit YajC [Brucella ab... 62.4 9e-18
Q2YNM1 Sec translocon accessory complex subunit YajC [Brucella ab... 62.4 9e-18
Q9WZW3 Sec translocon accessory complex subunit YajC [Thermotoga ... 61.2 3e-17
O26075 Sec translocon accessory complex subunit YajC [Helicobacte... 59.7 1e-16
Q9ZJ67 Sec translocon accessory complex subunit YajC [Helicobacte... 58.9 1e-16
Q9ZCW9 Sec translocon accessory complex subunit YajC [Rickettsia ... 59.3 3e-16
>P0ADZ8 Sec translocon accessory complex subunit YajC [Escherichia
coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)]
Length=110
Score = 101 bits (251), Expect = 5e-33
Identities = 56/110 (51%), Positives = 73/110 (66%), Gaps = 1/110 (1%)
Query 1 MSFLISTAHAADAAPQGPGMMANILMIVVFVAIFYFLIWRPQSKRAKEHRTLVESLGVGS 60
MSF IS A AA AP M+ ILM+VVF IFYF+I RPQ KR KEH+ L++S+ G
Sbjct 1 MSFFISDAVAATGAPAQGSPMSLILMLVVFGLIFYFMILRPQQKRTKEHKKLMDSIAKGD 60
Query 61 EVVFAGGLMGRITKI-EGDYAVVELSRGVEVKIQRASVISVLPEGTLNNL 109
EV+ GGL+GR+TK+ E Y + L+ EV I+R V +VLP+GT+ L
Sbjct 61 EVLTNGGLVGRVTKVAENGYIAIALNDTTEVVIKRDFVAAVLPKGTMKAL 110
>P0ADZ9 Sec translocon accessory complex subunit YajC [Escherichia
coli O157:H7]
Length=110
Score = 101 bits (251), Expect = 5e-33
Identities = 56/110 (51%), Positives = 73/110 (66%), Gaps = 1/110 (1%)
Query 1 MSFLISTAHAADAAPQGPGMMANILMIVVFVAIFYFLIWRPQSKRAKEHRTLVESLGVGS 60
MSF IS A AA AP M+ ILM+VVF IFYF+I RPQ KR KEH+ L++S+ G
Sbjct 1 MSFFISDAVAATGAPAQGSPMSLILMLVVFGLIFYFMILRPQQKRTKEHKKLMDSIAKGD 60
Query 61 EVVFAGGLMGRITKI-EGDYAVVELSRGVEVKIQRASVISVLPEGTLNNL 109
EV+ GGL+GR+TK+ E Y + L+ EV I+R V +VLP+GT+ L
Sbjct 61 EVLTNGGLVGRVTKVAENGYIAIALNDTTEVVIKRDFVAAVLPKGTMKAL 110
>P0ADZ7 Sec translocon accessory complex subunit YajC [Escherichia
coli (strain K12)]
Length=110
Score = 101 bits (251), Expect = 5e-33
Identities = 56/110 (51%), Positives = 73/110 (66%), Gaps = 1/110 (1%)
Query 1 MSFLISTAHAADAAPQGPGMMANILMIVVFVAIFYFLIWRPQSKRAKEHRTLVESLGVGS 60
MSF IS A AA AP M+ ILM+VVF IFYF+I RPQ KR KEH+ L++S+ G
Sbjct 1 MSFFISDAVAATGAPAQGSPMSLILMLVVFGLIFYFMILRPQQKRTKEHKKLMDSIAKGD 60
Query 61 EVVFAGGLMGRITKI-EGDYAVVELSRGVEVKIQRASVISVLPEGTLNNL 109
EV+ GGL+GR+TK+ E Y + L+ EV I+R V +VLP+GT+ L
Sbjct 61 EVLTNGGLVGRVTKVAENGYIAIALNDTTEVVIKRDFVAAVLPKGTMKAL 110
>P0AE00 Sec translocon accessory complex subunit YajC [Shigella
flexneri]
Length=110
Score = 101 bits (251), Expect = 5e-33
Identities = 56/110 (51%), Positives = 73/110 (66%), Gaps = 1/110 (1%)
Query 1 MSFLISTAHAADAAPQGPGMMANILMIVVFVAIFYFLIWRPQSKRAKEHRTLVESLGVGS 60
MSF IS A AA AP M+ ILM+VVF IFYF+I RPQ KR KEH+ L++S+ G
Sbjct 1 MSFFISDAVAATGAPAQGSPMSLILMLVVFGLIFYFMILRPQQKRTKEHKKLMDSIAKGD 60
Query 61 EVVFAGGLMGRITKI-EGDYAVVELSRGVEVKIQRASVISVLPEGTLNNL 109
EV+ GGL+GR+TK+ E Y + L+ EV I+R V +VLP+GT+ L
Sbjct 61 EVLTNGGLVGRVTKVAENGYIAIALNDTTEVVIKRDFVAAVLPKGTMKAL 110
>P57234 Sec translocon accessory complex subunit YajC [Buchnera
aphidicola subsp. Acyrthosiphon pisum (strain APS)]
Length=111
Score = 89.4 bits (220), Expect = 2e-28
Identities = 47/111 (42%), Positives = 72/111 (65%), Gaps = 2/111 (2%)
Query 1 MSFLISTAHAA-DAAPQGPGMMANILMIVVFVAIFYFLIWRPQSKRAKEHRTLVESLGVG 59
MSF I A+A + + + I M V+F+ IFYF+++RPQ K+ KEH+ L+ SL G
Sbjct 1 MSFFIQNANAVVNGTSESSNSYSLIFMAVIFLLIFYFMLFRPQQKKDKEHKNLINSLVQG 60
Query 60 SEVVFAGGLMGRITKI-EGDYAVVELSRGVEVKIQRASVISVLPEGTLNNL 109
EV+ GL+GRI KI + Y ++EL+ EV I++ ++S+LP+GTL +L
Sbjct 61 DEVITTSGLLGRIKKITKNGYILLELNETTEVFIKQDFIVSLLPKGTLKSL 111
>Q8KA08 Sec translocon accessory complex subunit YajC [Buchnera
aphidicola subsp. Schizaphis graminum (strain Sg)]
Length=110
Score = 86.7 bits (213), Expect = 3e-27
Identities = 43/110 (39%), Positives = 69/110 (63%), Gaps = 1/110 (1%)
Query 1 MSFLISTAHAADAAPQGPGMMANILMIVVFVAIFYFLIWRPQSKRAKEHRTLVESLGVGS 60
MSF I A+AA + I M+V F+ IFYF+++RPQ K+ KEH+ L+ S+ G
Sbjct 1 MSFFIKDANAAVNQALEGNSYSLIFMLVTFILIFYFMLFRPQQKKDKEHKNLMNSIAPGD 60
Query 61 EVVFAGGLMGRITKI-EGDYAVVELSRGVEVKIQRASVISVLPEGTLNNL 109
EV+ G +GR+ K+ E Y +++L+ E+ I++ ++S LP+GTL +L
Sbjct 61 EVMTTSGFLGRVKKVTENGYVLLQLNNTTEIFIKKDFIVSSLPKGTLESL 110
>P44592 Sec translocon accessory complex subunit YajC [Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=97
Score = 85.5 bits (210), Expect = 6e-27
Identities = 43/91 (47%), Positives = 66/91 (73%), Gaps = 2/91 (2%)
Query 21 MANILMIVVFVAIFYFLIWRPQSKRAKEHRTLVESLGVGSEVVFAGGLMGRITKI-EG-D 78
M+ + + V+F IFYF+I+RPQ+KR KEH+ L+ L G+EV+ AGG++G+ITK+ EG D
Sbjct 7 MSTLFIFVIFGLIFYFMIYRPQAKRNKEHKKLMSELAKGTEVLTAGGVIGKITKVTEGSD 66
Query 79 YAVVELSRGVEVKIQRASVISVLPEGTLNNL 109
V+ L+ E+ I R ++SVLP+G+L +L
Sbjct 67 SIVIALNDTTEITINRNYIVSVLPKGSLKSL 97
>Q89AV7 Sec translocon accessory complex subunit YajC [Buchnera
aphidicola subsp. Baizongia pistaciae (strain Bp)]
Length=115
Score = 82.8 bits (203), Expect = 1e-25
Identities = 39/87 (45%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Query 24 ILMIVVFVAIFYFLIWRPQSKRAKEHRTLVESLGVGSEVVFAGGLMGRITKI-EGDYAVV 82
I M++VF++IFYF+I+RPQ K+ +EH L++SL G EV + G +G+I KI + Y V+
Sbjct 26 IFMLLVFLSIFYFMIFRPQRKKIQEHDRLIKSLSYGDEVFTSSGFVGKIVKITKTGYIVL 85
Query 83 ELSRGVEVKIQRASVISVLPEGTLNNL 109
EL+ VEV ++ ++S+ P+GTL N+
Sbjct 86 ELNNNVEVFVKSDFIVSIFPKGTLKNM 112
>P0A4Q2 Sec translocon accessory complex subunit YajC [Brucella
suis biovar 1 (strain 1330)]
Length=113
Score = 62.4 bits (150), Expect = 9e-18
Identities = 31/95 (33%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query 11 ADAAPQGPGMMANILMIVVFVAIFYFLIWRPQSKRAKEHRTLVESLGVGSEVVFAGGLMG 70
A + GP M+ +IL ++ I YFLI RPQ + K+ + ++ S+ G VV GG++G
Sbjct 10 ASGSVVGPDMLMSILPFILIFVIMYFLIIRPQRTQMKKRQEMLNSVRRGDTVVTGGGIVG 69
Query 71 RITKIEGDYAV-VELSRGVEVKIQRASVISVLPEG 104
++ K+ D + +E++ GV +++ RA+++ V +G
Sbjct 70 KVLKVVDDNELELEIADGVRIRVVRATLMDVRVKG 104
>P0A4Q1 Sec translocon accessory complex subunit YajC [Brucella
melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)]
Length=113
Score = 62.4 bits (150), Expect = 9e-18
Identities = 31/95 (33%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query 11 ADAAPQGPGMMANILMIVVFVAIFYFLIWRPQSKRAKEHRTLVESLGVGSEVVFAGGLMG 70
A + GP M+ +IL ++ I YFLI RPQ + K+ + ++ S+ G VV GG++G
Sbjct 10 ASGSVVGPDMLMSILPFILIFVIMYFLIIRPQRTQMKKRQEMLNSVRRGDTVVTGGGIVG 69
Query 71 RITKIEGDYAV-VELSRGVEVKIQRASVISVLPEG 104
++ K+ D + +E++ GV +++ RA+++ V +G
Sbjct 70 KVLKVVDDNELELEIADGVRIRVVRATLMDVRVKG 104
>P0C120 Sec translocon accessory complex subunit YajC [Brucella
abortus biovar 1 (strain 9-941)]
Length=113
Score = 62.4 bits (150), Expect = 9e-18
Identities = 31/95 (33%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query 11 ADAAPQGPGMMANILMIVVFVAIFYFLIWRPQSKRAKEHRTLVESLGVGSEVVFAGGLMG 70
A + GP M+ +IL ++ I YFLI RPQ + K+ + ++ S+ G VV GG++G
Sbjct 10 ASGSVVGPDMLMSILPFILIFVIMYFLIIRPQRTQMKKRQEMLNSVRRGDTVVTGGGIVG 69
Query 71 RITKIEGDYAV-VELSRGVEVKIQRASVISVLPEG 104
++ K+ D + +E++ GV +++ RA+++ V +G
Sbjct 70 KVLKVVDDNELELEIADGVRIRVVRATLMDVRVKG 104
>Q2YNM1 Sec translocon accessory complex subunit YajC [Brucella
abortus (strain 2308)]
Length=113
Score = 62.4 bits (150), Expect = 9e-18
Identities = 31/95 (33%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query 11 ADAAPQGPGMMANILMIVVFVAIFYFLIWRPQSKRAKEHRTLVESLGVGSEVVFAGGLMG 70
A + GP M+ +IL ++ I YFLI RPQ + K+ + ++ S+ G VV GG++G
Sbjct 10 ASGSVVGPDMLMSILPFILIFVIMYFLIIRPQRTQMKKRQEMLNSVRRGDTVVTGGGIVG 69
Query 71 RITKIEGDYAV-VELSRGVEVKIQRASVISVLPEG 104
++ K+ D + +E++ GV +++ RA+++ V +G
Sbjct 70 KVLKVVDDNELELEIADGVRIRVVRATLMDVRVKG 104
>Q9WZW3 Sec translocon accessory complex subunit YajC [Thermotoga
maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC
100826 / MSB8)]
Length=116
Score = 61.2 bits (147), Expect = 3e-17
Identities = 27/92 (29%), Positives = 55/92 (60%), Gaps = 0/92 (0%)
Query 17 GPGMMANILMIVVFVAIFYFLIWRPQSKRAKEHRTLVESLGVGSEVVFAGGLMGRITKIE 76
G G + + M++ F+AIFYF+I PQ +R K+ + ++ + G VV GG++G++ I+
Sbjct 22 GGGWGSLLFMLIFFIAIFYFMIILPQRRREKQFQQMISQMKRGDTVVTIGGIVGKVIDIK 81
Query 77 GDYAVVELSRGVEVKIQRASVISVLPEGTLNN 108
D ++ + E++I + ++ +V+ E + N
Sbjct 82 KDTVKIKTANSTELEITKRAISTVIKERSQEN 113
>O26075 Sec translocon accessory complex subunit YajC [Helicobacter
pylori (strain ATCC 700392 / 26695)]
Length=127
Score = 59.7 bits (143), Expect = 1e-16
Identities = 30/84 (36%), Positives = 50/84 (60%), Gaps = 0/84 (0%)
Query 20 MMANILMIVVFVAIFYFLIWRPQSKRAKEHRTLVESLGVGSEVVFAGGLMGRITKIEGDY 79
++ +L +VV IFYFLI RPQ ++ K+H+ ++ESL G ++V GGL+ + K E ++
Sbjct 7 ILTTLLPLVVLFLIFYFLIVRPQRQQQKKHKEMIESLTKGDKIVTQGGLIVEVLKAEANF 66
Query 80 AVVELSRGVEVKIQRASVISVLPE 103
V+L+ K+ + V L E
Sbjct 67 FSVKLNDDTTAKLSKNYVAFKLDE 90
>Q9ZJ67 Sec translocon accessory complex subunit YajC [Helicobacter
pylori (strain J99 / ATCC 700824)]
Length=97
Score = 58.9 bits (141), Expect = 1e-16
Identities = 30/89 (34%), Positives = 51/89 (57%), Gaps = 0/89 (0%)
Query 20 MMANILMIVVFVAIFYFLIWRPQSKRAKEHRTLVESLGVGSEVVFAGGLMGRITKIEGDY 79
++ +L ++V IFYFLI RPQ ++ K+H+ ++E L G ++V GGL+ + K E ++
Sbjct 7 IITTLLPLLVLFLIFYFLIVRPQRQQQKKHKEMIEGLTKGDKIVTQGGLIVEVLKAEANF 66
Query 80 AVVELSRGVEVKIQRASVISVLPEGTLNN 108
V+L+ K+ + V L E T N
Sbjct 67 FSVKLNDDTTAKLSKNYVAFKLDEETTPN 95
>Q9ZCW9 Sec translocon accessory complex subunit YajC [Rickettsia
prowazekii (strain Madrid E)]
Length=142
Score = 59.3 bits (142), Expect = 3e-16
Identities = 31/84 (37%), Positives = 54/84 (64%), Gaps = 3/84 (4%)
Query 19 GMMANILMIVVFVAIFYFLIWRPQSKRAKEHRTLVESLGVGSEVVFAGGLMGRITKI-EG 77
G+ + I MI++F A+FYFL+ RPQ KR KE LV + G EV+ G+ G +TK+ E
Sbjct 34 GLTSLIPMILIF-AVFYFLLLRPQEKRRKEREKLVSGVKKGEEVLINSGIYGIVTKVSEN 92
Query 78 DYAV-VELSRGVEVKIQRASVISV 100
D + +E+++ V +K +++++ +
Sbjct 93 DNNIEIEIAKDVRIKAIKSAIVDI 116
Lambda K H a alpha
0.328 0.141 0.406 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 108783
Database: 73b84faf86442d9541f3e57ce87b13f2.SwissProt.fasta
Posted date: Jun 3, 2024 3:15 PM
Number of letters in database: 1,807
Number of sequences in database: 16
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
