BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: d4b9c458601b607ccc6d8a9590d5d8c9.SwissProt.fasta
1 sequences; 554 total letters
Query= ACIAD0599
Length=343
Score E
Sequences producing significant alignments: (Bits) Value
P80299 Cytosolic epoxide hydrolase 2 / Lipid-phosphate phosphatas... 35.0 3e-06
>P80299 Cytosolic epoxide hydrolase 2 / Lipid-phosphate phosphatase
[Rattus norvegicus]
Length=554
Score = 35.0 bits (79), Expect = 3e-06
Identities = 27/85 (32%), Positives = 41/85 (48%), Gaps = 17/85 (20%)
Query 203 NYRYYGCFDQPGVYGKAYYKVLSESKMGLNYSRRNDVTLYSSDRIVQLTGN------GLL 256
NY+ Y F +PGV +E+++ N SR +SD + LT N G+L
Sbjct 380 NYQLY--FQEPGV---------AEAELEKNMSRTFKSFFRTSDDMGLLTVNKATEMGGIL 428
Query 257 TFSPRIPGFEKLYTEQEVIYFDDQF 281
+P P K+ TE+E+ Y+ QF
Sbjct 429 VGTPEDPKVSKITTEEEIEYYIQQF 453
Score = 19.6 bits (39), Expect = 0.19
Identities = 9/25 (36%), Positives = 13/25 (52%), Gaps = 0/25 (0%)
Query 288 QFYDQHPDLAKAIAQAGWQKTRDSF 312
Q Y Q P +A+A + +T SF
Sbjct 382 QLYFQEPGVAEAELEKNMSRTFKSF 406
Score = 17.3 bits (33), Expect = 0.97
Identities = 7/19 (37%), Positives = 11/19 (58%), Gaps = 0/19 (0%)
Query 178 GVVYKEPEREKFLKDLADA 196
G++ EP+ KF+ D A
Sbjct 157 GMIKPEPQIYKFVLDTLKA 175
Score = 16.5 bits (31), Expect = 1.7
Identities = 10/33 (30%), Positives = 17/33 (52%), Gaps = 7/33 (21%)
Query 299 AIAQAGWQKTR-------DSFNAKRITQYMLEV 324
A+AQAG++ DS + I +Y +E+
Sbjct 278 ALAQAGFRVLAIDMKGYGDSSSPPEIEEYAMEL 310
Score = 15.4 bits (28), Expect = 3.9
Identities = 4/9 (44%), Positives = 7/9 (78%), Gaps = 0/9 (0%)
Query 293 HPDLAKAIA 301
HP+ +A+A
Sbjct 346 HPERVRAVA 354
Score = 15.0 bits (27), Expect = 5.1
Identities = 4/7 (57%), Positives = 6/7 (86%), Gaps = 0/7 (0%)
Query 273 EVIYFDD 279
EV++ DD
Sbjct 179 EVVFLDD 185
Score = 15.0 bits (27), Expect = 5.1
Identities = 11/41 (27%), Positives = 18/41 (44%), Gaps = 10/41 (24%)
Query 63 KEILKIVNNLE-PDLVLIGHS---------DLMSPEVLKQI 93
+E++ +N L P V IGH L PE ++ +
Sbjct 313 EEMVTFLNKLGIPQAVFIGHDWAGVLVWNMALFHPERVRAV 353
Score = 14.6 bits (26), Expect = 6.8
Identities = 9/25 (36%), Positives = 10/25 (40%), Gaps = 0/25 (0%)
Query 283 LAQKIQFYDQHPDLAKAIAQAGWQK 307
LAQ + QH D Q G K
Sbjct 136 LAQMMCELSQHFDFLIESCQVGMIK 160
Lambda K H a alpha
0.323 0.139 0.423 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 162342
Database: d4b9c458601b607ccc6d8a9590d5d8c9.SwissProt.fasta
Posted date: May 13, 2024 12:35 AM
Number of letters in database: 554
Number of sequences in database: 1
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40