BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 29d25c9ca0541030dc162e67fad54ffc.TrEMBL.fasta
25 sequences; 6,248 total letters
Query= ACIAD0600
Length=252
Score E
Sequences producing significant alignments: (Bits) Value
A0A7G2SCT4 Polysaccharide deacetylase [Acinetobacter sp] 509 0.0
Q6FEI5 Putative polysaccharide deacetylase [Acinetobacter baylyi ... 509 0.0
A0A1P8EMF0 Polysaccharide deacetylase [Acinetobacter soli] 495 0.0
N9AJI3 NodB homology domain-containing protein [Acinetobacter sol... 494 0.0
A0A3R9BHU0 Polysaccharide deacetylase family protein [Acinetobact... 493 0.0
A0A3D2SIH8 Polysaccharide deacetylase family protein [Acinetobact... 439 2e-161
A0A014B5F7 Polysaccharide deacetylase family protein [Acinetobact... 433 2e-159
A0A014CYC2 Polysaccharide deacetylase family protein [Acinetobact... 433 2e-159
A0A2L1VD05 Polysaccharide deacetylase family protein [Acinetobact... 433 3e-159
A0A2T7FR09 Polysaccharide deacetylase family protein [Acinetobact... 432 4e-159
A0A4Y3JAP5 Polysaccharide deacetylase [Acinetobacter pittii] 432 8e-159
A0A014FBC5 Polysaccharide deacetylase family protein [Acinetobact... 431 1e-158
A0A062N444 Polysaccharide deacetylase family protein [Acinetobact... 431 1e-158
A0A014CLU6 Polysaccharide deacetylase family protein [Acinetobact... 431 1e-158
A0A014BJ31 Polysaccharide deacetylase family protein [Acinetobact... 431 1e-158
A0A0E3XHR8 Pda2 [Acinetobacter baumannii] 112 1e-33
C8YNM0 Polysaccharide deacetylase Pdi [Streptococcus iniae] 83.2 5e-22
Q8VUB1 NodB homology domain-containing protein [Lactococcus lactis] 72.8 2e-18
O85100 Carbohydrate transporter [Escherichia coli] 72.0 4e-18
Q9X692 Shf [Escherichia coli] 68.9 5e-17
G4Y1I4 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [Staphy... 67.0 3e-16
Q9AIQ6 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [Staphy... 64.3 2e-15
B8Y3Y6 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [Staphy... 64.3 2e-15
Q6YI87 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [Staphy... 48.9 1e-10
P72436 Shf1 [Shigella flexneri] 48.1 2e-10
>A0A7G2SCT4 Polysaccharide deacetylase [Acinetobacter sp]
Length=251
Score = 509 bits (1311), Expect = 0.0
Identities = 251/251 (100%), Positives = 251/251 (100%), Gaps = 0/251 (0%)
Query 1 MMWLLYVIIGLVILAGLLYIMGNYTFWLPYRSNALPRIVMLHQVTPHAEASGMNMPPDKF 60
MMWLLYVIIGLVILAGLLYIMGNYTFWLPYRSNALPRIVMLHQVTPHAEASGMNMPPDKF
Sbjct 1 MMWLLYVIIGLVILAGLLYIMGNYTFWLPYRSNALPRIVMLHQVTPHAEASGMNMPPDKF 60
Query 61 EQLLQLLVKKNAVFCFVSELEQYREQKNVVALSFDDGFMDNYVYAFPLLKKYQAKATIYL 120
EQLLQLLVKKNAVFCFVSELEQYREQKNVVALSFDDGFMDNYVYAFPLLKKYQAKATIYL
Sbjct 61 EQLLQLLVKKNAVFCFVSELEQYREQKNVVALSFDDGFMDNYVYAFPLLKKYQAKATIYL 120
Query 121 ATQIEGIEALTVDQVQEMARSGFIEFGAHTQHHVNLLKLDDETAYQEMLHSKQDVETLVG 180
ATQIEGIEALTVDQVQEMARSGFIEFGAHTQHHVNLLKLDDETAYQEMLHSKQDVETLVG
Sbjct 121 ATQIEGIEALTVDQVQEMARSGFIEFGAHTQHHVNLLKLDDETAYQEMLHSKQDVETLVG 180
Query 181 ACPSFAYPFGRFNEKHQQMARKIGFKNAVSTRKKIEPYDPEHPFNIPRVSTHGAMNALQM 240
ACPSFAYPFGRFNEKHQQMARKIGFKNAVSTRKKIEPYDPEHPFNIPRVSTHGAMNALQM
Sbjct 181 ACPSFAYPFGRFNEKHQQMARKIGFKNAVSTRKKIEPYDPEHPFNIPRVSTHGAMNALQM 240
Query 241 RIALAKGRYKL 251
RIALAKGRYKL
Sbjct 241 RIALAKGRYKL 251
>Q6FEI5 Putative polysaccharide deacetylase [Acinetobacter baylyi
(strain ATCC 33305 / BD413 / ADP1)]
Length=251
Score = 509 bits (1311), Expect = 0.0
Identities = 251/251 (100%), Positives = 251/251 (100%), Gaps = 0/251 (0%)
Query 1 MMWLLYVIIGLVILAGLLYIMGNYTFWLPYRSNALPRIVMLHQVTPHAEASGMNMPPDKF 60
MMWLLYVIIGLVILAGLLYIMGNYTFWLPYRSNALPRIVMLHQVTPHAEASGMNMPPDKF
Sbjct 1 MMWLLYVIIGLVILAGLLYIMGNYTFWLPYRSNALPRIVMLHQVTPHAEASGMNMPPDKF 60
Query 61 EQLLQLLVKKNAVFCFVSELEQYREQKNVVALSFDDGFMDNYVYAFPLLKKYQAKATIYL 120
EQLLQLLVKKNAVFCFVSELEQYREQKNVVALSFDDGFMDNYVYAFPLLKKYQAKATIYL
Sbjct 61 EQLLQLLVKKNAVFCFVSELEQYREQKNVVALSFDDGFMDNYVYAFPLLKKYQAKATIYL 120
Query 121 ATQIEGIEALTVDQVQEMARSGFIEFGAHTQHHVNLLKLDDETAYQEMLHSKQDVETLVG 180
ATQIEGIEALTVDQVQEMARSGFIEFGAHTQHHVNLLKLDDETAYQEMLHSKQDVETLVG
Sbjct 121 ATQIEGIEALTVDQVQEMARSGFIEFGAHTQHHVNLLKLDDETAYQEMLHSKQDVETLVG 180
Query 181 ACPSFAYPFGRFNEKHQQMARKIGFKNAVSTRKKIEPYDPEHPFNIPRVSTHGAMNALQM 240
ACPSFAYPFGRFNEKHQQMARKIGFKNAVSTRKKIEPYDPEHPFNIPRVSTHGAMNALQM
Sbjct 181 ACPSFAYPFGRFNEKHQQMARKIGFKNAVSTRKKIEPYDPEHPFNIPRVSTHGAMNALQM 240
Query 241 RIALAKGRYKL 251
RIALAKGRYKL
Sbjct 241 RIALAKGRYKL 251
>A0A1P8EMF0 Polysaccharide deacetylase [Acinetobacter soli]
Length=251
Score = 495 bits (1275), Expect = 0.0
Identities = 241/251 (96%), Positives = 248/251 (99%), Gaps = 0/251 (0%)
Query 1 MMWLLYVIIGLVILAGLLYIMGNYTFWLPYRSNALPRIVMLHQVTPHAEASGMNMPPDKF 60
MMWLLY+IIGLVILA LLY++GNYTFWLP+RSN LPRIVMLHQVTPHA+ASGMNMPP+KF
Sbjct 1 MMWLLYIIIGLVILAALLYVLGNYTFWLPFRSNKLPRIVMLHQVTPHAQASGMNMPPEKF 60
Query 61 EQLLQLLVKKNAVFCFVSELEQYREQKNVVALSFDDGFMDNYVYAFPLLKKYQAKATIYL 120
EQLLQLLVKKNAVFCFVSELEQYREQKNVVALSFDDGFMDNYVYA+PLLKKYQAKATIYL
Sbjct 61 EQLLQLLVKKNAVFCFVSELEQYREQKNVVALSFDDGFMDNYVYAYPLLKKYQAKATIYL 120
Query 121 ATQIEGIEALTVDQVQEMARSGFIEFGAHTQHHVNLLKLDDETAYQEMLHSKQDVETLVG 180
ATQIEGIEALTVDQVQEMARSGFIEFGAHTQHHVNLLKLDDETAYQEMLHSKQDVETLVG
Sbjct 121 ATQIEGIEALTVDQVQEMARSGFIEFGAHTQHHVNLLKLDDETAYQEMLHSKQDVETLVG 180
Query 181 ACPSFAYPFGRFNEKHQQMARKIGFKNAVSTRKKIEPYDPEHPFNIPRVSTHGAMNALQM 240
ACPSFAYPFGRFNEKHQQMARKIGFKNAVSTRKKIEPYDP HPFNIPRVSTHGAMNALQM
Sbjct 181 ACPSFAYPFGRFNEKHQQMARKIGFKNAVSTRKKIEPYDPAHPFNIPRVSTHGAMNALQM 240
Query 241 RIALAKGRYKL 251
RIALAKGRYKL
Sbjct 241 RIALAKGRYKL 251
>N9AJI3 NodB homology domain-containing protein [Acinetobacter
soli NIPH 2899]
Length=251
Score = 494 bits (1272), Expect = 0.0
Identities = 240/251 (96%), Positives = 248/251 (99%), Gaps = 0/251 (0%)
Query 1 MMWLLYVIIGLVILAGLLYIMGNYTFWLPYRSNALPRIVMLHQVTPHAEASGMNMPPDKF 60
MMWLLY+IIGLVILA LLY++GNYTFWLP+RSN LPRI+MLHQVTPHA+ASGMNMPP+KF
Sbjct 1 MMWLLYIIIGLVILAALLYVLGNYTFWLPFRSNKLPRILMLHQVTPHAQASGMNMPPEKF 60
Query 61 EQLLQLLVKKNAVFCFVSELEQYREQKNVVALSFDDGFMDNYVYAFPLLKKYQAKATIYL 120
EQLLQLLVKKNAVFCFVSELEQYREQKNVVALSFDDGFMDNYVYA+PLLKKYQAKATIYL
Sbjct 61 EQLLQLLVKKNAVFCFVSELEQYREQKNVVALSFDDGFMDNYVYAYPLLKKYQAKATIYL 120
Query 121 ATQIEGIEALTVDQVQEMARSGFIEFGAHTQHHVNLLKLDDETAYQEMLHSKQDVETLVG 180
ATQIEGIEALTVDQVQEMARSGFIEFGAHTQHHVNLLKLDDETAYQEMLHSKQDVETLVG
Sbjct 121 ATQIEGIEALTVDQVQEMARSGFIEFGAHTQHHVNLLKLDDETAYQEMLHSKQDVETLVG 180
Query 181 ACPSFAYPFGRFNEKHQQMARKIGFKNAVSTRKKIEPYDPEHPFNIPRVSTHGAMNALQM 240
ACPSFAYPFGRFNEKHQQMARKIGFKNAVSTRKKIEPYDP HPFNIPRVSTHGAMNALQM
Sbjct 181 ACPSFAYPFGRFNEKHQQMARKIGFKNAVSTRKKIEPYDPAHPFNIPRVSTHGAMNALQM 240
Query 241 RIALAKGRYKL 251
RIALAKGRYKL
Sbjct 241 RIALAKGRYKL 251
>A0A3R9BHU0 Polysaccharide deacetylase family protein [Acinetobacter
soli]
Length=251
Score = 493 bits (1270), Expect = 0.0
Identities = 240/251 (96%), Positives = 247/251 (98%), Gaps = 0/251 (0%)
Query 1 MMWLLYVIIGLVILAGLLYIMGNYTFWLPYRSNALPRIVMLHQVTPHAEASGMNMPPDKF 60
MMWLLY+IIGLVILA LLY++GNYTFWLP+RSN LPRIVMLHQVTPHA+ASGMNMPP+KF
Sbjct 1 MMWLLYIIIGLVILAALLYVLGNYTFWLPFRSNKLPRIVMLHQVTPHAQASGMNMPPEKF 60
Query 61 EQLLQLLVKKNAVFCFVSELEQYREQKNVVALSFDDGFMDNYVYAFPLLKKYQAKATIYL 120
EQLLQLLVKKNAVFCFVSELEQYREQKNVVALSFDDGFMDNYVYA+PLLKKYQAKATIYL
Sbjct 61 EQLLQLLVKKNAVFCFVSELEQYREQKNVVALSFDDGFMDNYVYAYPLLKKYQAKATIYL 120
Query 121 ATQIEGIEALTVDQVQEMARSGFIEFGAHTQHHVNLLKLDDETAYQEMLHSKQDVETLVG 180
ATQIEGIEALTVDQVQEMARSGFIEFGAHTQHHVNLLKLDDE AYQEMLHSKQDVETLVG
Sbjct 121 ATQIEGIEALTVDQVQEMARSGFIEFGAHTQHHVNLLKLDDEAAYQEMLHSKQDVETLVG 180
Query 181 ACPSFAYPFGRFNEKHQQMARKIGFKNAVSTRKKIEPYDPEHPFNIPRVSTHGAMNALQM 240
ACPSFAYPFGRFNEKHQQMARKIGFKNAVSTRKKIEPYDP HPFNIPRVSTHGAMNALQM
Sbjct 181 ACPSFAYPFGRFNEKHQQMARKIGFKNAVSTRKKIEPYDPAHPFNIPRVSTHGAMNALQM 240
Query 241 RIALAKGRYKL 251
RIALAKGRYKL
Sbjct 241 RIALAKGRYKL 251
>A0A3D2SIH8 Polysaccharide deacetylase family protein [Acinetobacter
ursingii]
Length=251
Score = 439 bits (1128), Expect = 2e-161
Identities = 211/251 (84%), Positives = 230/251 (92%), Gaps = 0/251 (0%)
Query 1 MMWLLYVIIGLVILAGLLYIMGNYTFWLPYRSNALPRIVMLHQVTPHAEASGMNMPPDKF 60
MMWLLY IIGLVILAGLLY++GNYTFWLP+RS+ LPR++MLHQVTPHA ASGMNMPP+KF
Sbjct 1 MMWLLYAIIGLVILAGLLYMLGNYTFWLPFRSSKLPRVIMLHQVTPHANASGMNMPPEKF 60
Query 61 EQLLQLLVKKNAVFCFVSELEQYREQKNVVALSFDDGFMDNYVYAFPLLKKYQAKATIYL 120
EQLLQLLV K ++FCFVSELEQYR+Q +VVA+SFDDGFMDNY YA+PLLKKYQAKATIYL
Sbjct 61 EQLLQLLVSKKSIFCFVSELEQYRDQSHVVAISFDDGFMDNYTYAYPLLKKYQAKATIYL 120
Query 121 ATQIEGIEALTVDQVQEMARSGFIEFGAHTQHHVNLLKLDDETAYQEMLHSKQDVETLVG 180
ATQI GIE L+ DQ+QEMA SG +EFGAHTQHHVNLLKLDD+TAY EM SKQDVE LVG
Sbjct 121 ATQIAGIEKLSHDQIQEMAASGLVEFGAHTQHHVNLLKLDDQTAYAEMQKSKQDVEALVG 180
Query 181 ACPSFAYPFGRFNEKHQQMARKIGFKNAVSTRKKIEPYDPEHPFNIPRVSTHGAMNALQM 240
C SFAYPFGRFNEKHQQMAR IGFKNAVSTRKKIE YD ++PFNIPRVSTHGAMNALQM
Sbjct 181 KCSSFAYPFGRFNEKHQQMARDIGFKNAVSTRKKIEAYDVQNPFNIPRVSTHGAMNALQM 240
Query 241 RIALAKGRYKL 251
RIALAKGRYKL
Sbjct 241 RIALAKGRYKL 251
>A0A014B5F7 Polysaccharide deacetylase family protein [Acinetobacter
sp. 25977_8]
Length=251
Score = 433 bits (1114), Expect = 2e-159
Identities = 209/251 (83%), Positives = 227/251 (90%), Gaps = 0/251 (0%)
Query 1 MMWLLYVIIGLVILAGLLYIMGNYTFWLPYRSNALPRIVMLHQVTPHAEASGMNMPPDKF 60
MMW LYV +GL+ILA LLY++GNYTFWLP+RSN LPRIVMLHQVTP ASGMNMPP+KF
Sbjct 1 MMWFLYVAVGLLILAALLYVLGNYTFWLPFRSNKLPRIVMLHQVTPKDAASGMNMPPEKF 60
Query 61 EQLLQLLVKKNAVFCFVSELEQYREQKNVVALSFDDGFMDNYVYAFPLLKKYQAKATIYL 120
EQLLQLL +K A+FCFVSELEQYR QKNVVALSFDDGFMDNY+YA+PLLKKY AKATIYL
Sbjct 61 EQLLQLLTRKGAIFCFVSELEQYRNQKNVVALSFDDGFMDNYLYAYPLLKKYNAKATIYL 120
Query 121 ATQIEGIEALTVDQVQEMARSGFIEFGAHTQHHVNLLKLDDETAYQEMLHSKQDVETLVG 180
ATQIEGIE LT DQ+ EMA SG IEFGAHTQHHVNLLKLDD+TAY EML SK+DVE LVG
Sbjct 121 ATQIEGIEKLTHDQIHEMANSGLIEFGAHTQHHVNLLKLDDQTAYNEMLQSKRDVEALVG 180
Query 181 ACPSFAYPFGRFNEKHQQMARKIGFKNAVSTRKKIEPYDPEHPFNIPRVSTHGAMNALQM 240
CPSFAYPFGRFNEKHQ+MA+ IGFKNAVSTRKKIE Y+ ++ FNIPRVSTHGAMNALQM
Sbjct 181 KCPSFAYPFGRFNEKHQKMAQNIGFKNAVSTRKKIEAYEADNQFNIPRVSTHGAMNALQM 240
Query 241 RIALAKGRYKL 251
RIALAKGRYKL
Sbjct 241 RIALAKGRYKL 251
>A0A014CYC2 Polysaccharide deacetylase family protein [Acinetobacter
sp. 25977_1]
Length=251
Score = 433 bits (1114), Expect = 2e-159
Identities = 209/251 (83%), Positives = 227/251 (90%), Gaps = 0/251 (0%)
Query 1 MMWLLYVIIGLVILAGLLYIMGNYTFWLPYRSNALPRIVMLHQVTPHAEASGMNMPPDKF 60
MMW LYV +GL+ILA LLY++GNYTFWLP+RSN LPRIVMLHQVTP ASGMNMPP+KF
Sbjct 1 MMWFLYVAVGLLILAALLYVLGNYTFWLPFRSNKLPRIVMLHQVTPKDAASGMNMPPEKF 60
Query 61 EQLLQLLVKKNAVFCFVSELEQYREQKNVVALSFDDGFMDNYVYAFPLLKKYQAKATIYL 120
EQLLQLL +K A+FCFVSELEQYR QKNVVALSFDDGFMDNY+YA+PLLKKY AKATIYL
Sbjct 61 EQLLQLLTRKGAIFCFVSELEQYRNQKNVVALSFDDGFMDNYLYAYPLLKKYNAKATIYL 120
Query 121 ATQIEGIEALTVDQVQEMARSGFIEFGAHTQHHVNLLKLDDETAYQEMLHSKQDVETLVG 180
ATQIEGIE LT DQ+ EMA SG IEFGAHTQHHVNLLKLDD+TAY EML SK+DVE LVG
Sbjct 121 ATQIEGIEKLTHDQIHEMANSGLIEFGAHTQHHVNLLKLDDQTAYNEMLQSKRDVEALVG 180
Query 181 ACPSFAYPFGRFNEKHQQMARKIGFKNAVSTRKKIEPYDPEHPFNIPRVSTHGAMNALQM 240
CPSFAYPFGRFNEKHQ+MA+ IGFKNAVSTRKKIE Y+ ++ FNIPRVSTHGAMNALQM
Sbjct 181 KCPSFAYPFGRFNEKHQKMAQNIGFKNAVSTRKKIEAYEADNQFNIPRVSTHGAMNALQM 240
Query 241 RIALAKGRYKL 251
RIALAKGRYKL
Sbjct 241 RIALAKGRYKL 251
>A0A2L1VD05 Polysaccharide deacetylase family protein [Acinetobacter
nosocomialis]
Length=251
Score = 433 bits (1113), Expect = 3e-159
Identities = 209/251 (83%), Positives = 227/251 (90%), Gaps = 0/251 (0%)
Query 1 MMWLLYVIIGLVILAGLLYIMGNYTFWLPYRSNALPRIVMLHQVTPHAEASGMNMPPDKF 60
MMW LYV +GL+ILA LLY++GNYTFWLP+RSN LPRIVMLHQVTP ASGMNMPP+KF
Sbjct 1 MMWFLYVAVGLLILAALLYVLGNYTFWLPFRSNKLPRIVMLHQVTPKDAASGMNMPPEKF 60
Query 61 EQLLQLLVKKNAVFCFVSELEQYREQKNVVALSFDDGFMDNYVYAFPLLKKYQAKATIYL 120
EQLLQLL +K A+FCFVSELEQYR QKNVVALSFDDGFMDNY+YA+PLLKKY AKATIYL
Sbjct 61 EQLLQLLTRKGAIFCFVSELEQYRNQKNVVALSFDDGFMDNYLYAYPLLKKYNAKATIYL 120
Query 121 ATQIEGIEALTVDQVQEMARSGFIEFGAHTQHHVNLLKLDDETAYQEMLHSKQDVETLVG 180
ATQIEGIE LT DQ+ EMA SG IEFGAHTQHHVNLLKLDD+TAY EML SK+DVE LVG
Sbjct 121 ATQIEGIEKLTHDQIHEMANSGLIEFGAHTQHHVNLLKLDDQTAYNEMLQSKRDVEALVG 180
Query 181 ACPSFAYPFGRFNEKHQQMARKIGFKNAVSTRKKIEPYDPEHPFNIPRVSTHGAMNALQM 240
CPSFAYPFGRFNEKHQ+MA+ IGFKNAVSTRKKIE Y+ ++ FNIPRVSTHGAMNALQM
Sbjct 181 KCPSFAYPFGRFNEKHQKMAQDIGFKNAVSTRKKIEAYEADNQFNIPRVSTHGAMNALQM 240
Query 241 RIALAKGRYKL 251
RIALAKGRYKL
Sbjct 241 RIALAKGRYKL 251
>A0A2T7FR09 Polysaccharide deacetylase family protein [Acinetobacter
nosocomialis]
Length=251
Score = 432 bits (1112), Expect = 4e-159
Identities = 209/251 (83%), Positives = 227/251 (90%), Gaps = 0/251 (0%)
Query 1 MMWLLYVIIGLVILAGLLYIMGNYTFWLPYRSNALPRIVMLHQVTPHAEASGMNMPPDKF 60
MMW LYV +GL+ILA LLY++GNYTFWLP+RSN LPRIVMLHQVTP ASGMNMPP+KF
Sbjct 1 MMWFLYVAVGLLILAALLYVLGNYTFWLPFRSNKLPRIVMLHQVTPKDAASGMNMPPEKF 60
Query 61 EQLLQLLVKKNAVFCFVSELEQYREQKNVVALSFDDGFMDNYVYAFPLLKKYQAKATIYL 120
EQLLQLL +K A+FCFVSELEQYR QKNVVALSFDDGFMDNY+YA+PLLKKY AKATIYL
Sbjct 61 EQLLQLLTRKGAIFCFVSELEQYRNQKNVVALSFDDGFMDNYLYAYPLLKKYNAKATIYL 120
Query 121 ATQIEGIEALTVDQVQEMARSGFIEFGAHTQHHVNLLKLDDETAYQEMLHSKQDVETLVG 180
ATQIEGIE LT DQ+ EMA SG IEFGAHTQHHVNLLKLDD+TAY EML SK+DVE LVG
Sbjct 121 ATQIEGIEKLTHDQIHEMANSGLIEFGAHTQHHVNLLKLDDQTAYNEMLQSKRDVEALVG 180
Query 181 ACPSFAYPFGRFNEKHQQMARKIGFKNAVSTRKKIEPYDPEHPFNIPRVSTHGAMNALQM 240
CPSFAYPFGRFNEKHQ+MA+ IGFKNAVSTRKKIE Y+ ++ FNIPRVSTHGAMNALQM
Sbjct 181 KCPSFAYPFGRFNEKHQKMAQDIGFKNAVSTRKKIEAYEVDNQFNIPRVSTHGAMNALQM 240
Query 241 RIALAKGRYKL 251
RIALAKGRYKL
Sbjct 241 RIALAKGRYKL 251
>A0A4Y3JAP5 Polysaccharide deacetylase [Acinetobacter pittii]
Length=251
Score = 432 bits (1110), Expect = 8e-159
Identities = 207/251 (82%), Positives = 228/251 (91%), Gaps = 0/251 (0%)
Query 1 MMWLLYVIIGLVILAGLLYIMGNYTFWLPYRSNALPRIVMLHQVTPHAEASGMNMPPDKF 60
MMW LYV IGL++LA LLY++GNYTFWLP+RSN LPRIVMLHQVTP ASGMNMPP+KF
Sbjct 1 MMWFLYVAIGLLVLAALLYVLGNYTFWLPFRSNKLPRIVMLHQVTPKDAASGMNMPPEKF 60
Query 61 EQLLQLLVKKNAVFCFVSELEQYREQKNVVALSFDDGFMDNYVYAFPLLKKYQAKATIYL 120
EQLLQLL +K A+FCFVSELEQYR QKNVVALSFDDGFMDNY+YA+PLLKKY AKATIYL
Sbjct 61 EQLLQLLTRKGAIFCFVSELEQYRNQKNVVALSFDDGFMDNYLYAYPLLKKYNAKATIYL 120
Query 121 ATQIEGIEALTVDQVQEMARSGFIEFGAHTQHHVNLLKLDDETAYQEMLHSKQDVETLVG 180
ATQIEGIE LT +Q+ EMA SG +EFGAHTQHHVNLLKLDD+TAY EML SK+DVE LVG
Sbjct 121 ATQIEGIEKLTHEQIHEMANSGLVEFGAHTQHHVNLLKLDDQTAYDEMLQSKRDVEALVG 180
Query 181 ACPSFAYPFGRFNEKHQQMARKIGFKNAVSTRKKIEPYDPEHPFNIPRVSTHGAMNALQM 240
CPSFAYPFGRFNEKHQ+MA++IGFKNAVSTRKKIE Y+ ++ FNIPRVSTHGAMNALQM
Sbjct 181 KCPSFAYPFGRFNEKHQKMAQEIGFKNAVSTRKKIEAYEADNQFNIPRVSTHGAMNALQM 240
Query 241 RIALAKGRYKL 251
RIALAKGRYKL
Sbjct 241 RIALAKGRYKL 251
>A0A014FBC5 Polysaccharide deacetylase family protein [Acinetobacter
sp. 25977_2]
Length=250
Score = 431 bits (1109), Expect = 1e-158
Identities = 208/250 (83%), Positives = 226/250 (90%), Gaps = 0/250 (0%)
Query 2 MWLLYVIIGLVILAGLLYIMGNYTFWLPYRSNALPRIVMLHQVTPHAEASGMNMPPDKFE 61
MW LYV +GL+ILA LLY++GNYTFWLP+RSN LPRIVMLHQVTP ASGMNMPP+KFE
Sbjct 1 MWFLYVAVGLLILAALLYVLGNYTFWLPFRSNKLPRIVMLHQVTPKDAASGMNMPPEKFE 60
Query 62 QLLQLLVKKNAVFCFVSELEQYREQKNVVALSFDDGFMDNYVYAFPLLKKYQAKATIYLA 121
QLLQLL +K A+FCFVSELEQYR QKNVVALSFDDGFMDNY+YA+PLLKKY AKATIYLA
Sbjct 61 QLLQLLTRKGAIFCFVSELEQYRNQKNVVALSFDDGFMDNYLYAYPLLKKYNAKATIYLA 120
Query 122 TQIEGIEALTVDQVQEMARSGFIEFGAHTQHHVNLLKLDDETAYQEMLHSKQDVETLVGA 181
TQIEGIE LT DQ+ EMA SG IEFGAHTQHHVNLLKLDD+TAY EML SK+DVE LVG
Sbjct 121 TQIEGIEKLTHDQIHEMANSGLIEFGAHTQHHVNLLKLDDQTAYNEMLQSKRDVEALVGK 180
Query 182 CPSFAYPFGRFNEKHQQMARKIGFKNAVSTRKKIEPYDPEHPFNIPRVSTHGAMNALQMR 241
CPSFAYPFGRFNEKHQ+MA+ IGFKNAVSTRKKIE Y+ ++ FNIPRVSTHGAMNALQMR
Sbjct 181 CPSFAYPFGRFNEKHQKMAQNIGFKNAVSTRKKIEAYEADNQFNIPRVSTHGAMNALQMR 240
Query 242 IALAKGRYKL 251
IALAKGRYKL
Sbjct 241 IALAKGRYKL 250
>A0A062N444 Polysaccharide deacetylase family protein [Acinetobacter
sp. 796380-1375]
Length=250
Score = 431 bits (1109), Expect = 1e-158
Identities = 208/250 (83%), Positives = 226/250 (90%), Gaps = 0/250 (0%)
Query 2 MWLLYVIIGLVILAGLLYIMGNYTFWLPYRSNALPRIVMLHQVTPHAEASGMNMPPDKFE 61
MW LYV +GL+ILA LLY++GNYTFWLP+RSN LPRIVMLHQVTP ASGMNMPP+KFE
Sbjct 1 MWFLYVAVGLLILAALLYVLGNYTFWLPFRSNKLPRIVMLHQVTPKDAASGMNMPPEKFE 60
Query 62 QLLQLLVKKNAVFCFVSELEQYREQKNVVALSFDDGFMDNYVYAFPLLKKYQAKATIYLA 121
QLLQLL +K A+FCFVSELEQYR QKNVVALSFDDGFMDNY+YA+PLLKKY AKATIYLA
Sbjct 61 QLLQLLTRKGAIFCFVSELEQYRNQKNVVALSFDDGFMDNYLYAYPLLKKYNAKATIYLA 120
Query 122 TQIEGIEALTVDQVQEMARSGFIEFGAHTQHHVNLLKLDDETAYQEMLHSKQDVETLVGA 181
TQIEGIE LT DQ+ EMA SG IEFGAHTQHHVNLLKLDD+TAY EML SK+DVE LVG
Sbjct 121 TQIEGIEKLTHDQIHEMANSGLIEFGAHTQHHVNLLKLDDQTAYNEMLQSKRDVEALVGK 180
Query 182 CPSFAYPFGRFNEKHQQMARKIGFKNAVSTRKKIEPYDPEHPFNIPRVSTHGAMNALQMR 241
CPSFAYPFGRFNEKHQ+MA+ IGFKNAVSTRKKIE Y+ ++ FNIPRVSTHGAMNALQMR
Sbjct 181 CPSFAYPFGRFNEKHQKMAQNIGFKNAVSTRKKIEAYEADNQFNIPRVSTHGAMNALQMR 240
Query 242 IALAKGRYKL 251
IALAKGRYKL
Sbjct 241 IALAKGRYKL 250
>A0A014CLU6 Polysaccharide deacetylase family protein [Acinetobacter
sp. 25977_6]
Length=250
Score = 431 bits (1109), Expect = 1e-158
Identities = 208/250 (83%), Positives = 226/250 (90%), Gaps = 0/250 (0%)
Query 2 MWLLYVIIGLVILAGLLYIMGNYTFWLPYRSNALPRIVMLHQVTPHAEASGMNMPPDKFE 61
MW LYV +GL+ILA LLY++GNYTFWLP+RSN LPRIVMLHQVTP ASGMNMPP+KFE
Sbjct 1 MWFLYVAVGLLILAALLYVLGNYTFWLPFRSNKLPRIVMLHQVTPKDAASGMNMPPEKFE 60
Query 62 QLLQLLVKKNAVFCFVSELEQYREQKNVVALSFDDGFMDNYVYAFPLLKKYQAKATIYLA 121
QLLQLL +K A+FCFVSELEQYR QKNVVALSFDDGFMDNY+YA+PLLKKY AKATIYLA
Sbjct 61 QLLQLLTRKGAIFCFVSELEQYRNQKNVVALSFDDGFMDNYLYAYPLLKKYNAKATIYLA 120
Query 122 TQIEGIEALTVDQVQEMARSGFIEFGAHTQHHVNLLKLDDETAYQEMLHSKQDVETLVGA 181
TQIEGIE LT DQ+ EMA SG IEFGAHTQHHVNLLKLDD+TAY EML SK+DVE LVG
Sbjct 121 TQIEGIEKLTHDQIHEMANSGLIEFGAHTQHHVNLLKLDDQTAYNEMLQSKRDVEALVGK 180
Query 182 CPSFAYPFGRFNEKHQQMARKIGFKNAVSTRKKIEPYDPEHPFNIPRVSTHGAMNALQMR 241
CPSFAYPFGRFNEKHQ+MA+ IGFKNAVSTRKKIE Y+ ++ FNIPRVSTHGAMNALQMR
Sbjct 181 CPSFAYPFGRFNEKHQKMAQNIGFKNAVSTRKKIEAYEADNQFNIPRVSTHGAMNALQMR 240
Query 242 IALAKGRYKL 251
IALAKGRYKL
Sbjct 241 IALAKGRYKL 250
>A0A014BJ31 Polysaccharide deacetylase family protein [Acinetobacter
sp. 25977_7]
Length=250
Score = 431 bits (1109), Expect = 1e-158
Identities = 208/250 (83%), Positives = 226/250 (90%), Gaps = 0/250 (0%)
Query 2 MWLLYVIIGLVILAGLLYIMGNYTFWLPYRSNALPRIVMLHQVTPHAEASGMNMPPDKFE 61
MW LYV +GL+ILA LLY++GNYTFWLP+RSN LPRIVMLHQVTP ASGMNMPP+KFE
Sbjct 1 MWFLYVAVGLLILAALLYVLGNYTFWLPFRSNKLPRIVMLHQVTPKDAASGMNMPPEKFE 60
Query 62 QLLQLLVKKNAVFCFVSELEQYREQKNVVALSFDDGFMDNYVYAFPLLKKYQAKATIYLA 121
QLLQLL +K A+FCFVSELEQYR QKNVVALSFDDGFMDNY+YA+PLLKKY AKATIYLA
Sbjct 61 QLLQLLTRKGAIFCFVSELEQYRNQKNVVALSFDDGFMDNYLYAYPLLKKYNAKATIYLA 120
Query 122 TQIEGIEALTVDQVQEMARSGFIEFGAHTQHHVNLLKLDDETAYQEMLHSKQDVETLVGA 181
TQIEGIE LT DQ+ EMA SG IEFGAHTQHHVNLLKLDD+TAY EML SK+DVE LVG
Sbjct 121 TQIEGIEKLTHDQIHEMANSGLIEFGAHTQHHVNLLKLDDQTAYNEMLQSKRDVEALVGK 180
Query 182 CPSFAYPFGRFNEKHQQMARKIGFKNAVSTRKKIEPYDPEHPFNIPRVSTHGAMNALQMR 241
CPSFAYPFGRFNEKHQ+MA+ IGFKNAVSTRKKIE Y+ ++ FNIPRVSTHGAMNALQMR
Sbjct 181 CPSFAYPFGRFNEKHQKMAQNIGFKNAVSTRKKIEAYEADNQFNIPRVSTHGAMNALQMR 240
Query 242 IALAKGRYKL 251
IALAKGRYKL
Sbjct 241 IALAKGRYKL 250
>A0A0E3XHR8 Pda2 [Acinetobacter baumannii]
Length=235
Score = 112 bits (281), Expect = 1e-33
Identities = 76/234 (32%), Positives = 120/234 (51%), Gaps = 29/234 (12%)
Query 40 MLHQVTPHAEASGMN---MPPDKFEQLLQLLVKKNAVFCFVSELEQY--REQKNVVALSF 94
M H V H + N + P +FE+ + + + F + EL++ VA++F
Sbjct 1 MYHMVRDHINGAKFNKLRVKPAEFEKQVAWMKAQGFHFVTMHELQENWGNHPAKTVAITF 60
Query 95 DDGFMDNYVYAFPLLKKYQAKATIYLAT------------------QIEGIEALTVDQVQ 136
DDG++DN A+P+L+KYQAKATIY+ ++ L QV+
Sbjct 61 DDGYLDNLQNAYPILEKYQAKATIYVVVDRHDRDWSTYKKEHHNSGELMREAKLNDAQVK 120
Query 137 EMARSGFIEFGAHTQHHVNLLKLDDETAYQEMLHSKQDVETLV-GACPSFAYPFGRFNEK 195
++A S IE G+HT H NL KLDD +E+ SKQ +E L+ SFAYPFG ++++
Sbjct 121 QLADSELIEIGSHTLTHANLNKLDDTDCLKELTDSKQWLEQLIEKPVTSFAYPFGIYSDR 180
Query 196 HQQMARKIGFKNAVSTRKKIEPYDPEHP--FNIPRVSTHGAMNALQMRIALAKG 247
++A++ G+ NAV+T IE D E P + R+ G + +++ L G
Sbjct 181 DVKLAKQSGYSNAVTT---IEGIDDEQPDFMQLQRIKISGKDSLFAVKLRLKLG 231
>C8YNM0 Polysaccharide deacetylase Pdi [Streptococcus iniae]
Length=306
Score = 83.2 bits (204), Expect = 5e-22
Identities = 70/211 (33%), Positives = 110/211 (52%), Gaps = 28/211 (13%)
Query 23 NYTFWLPYRSNALPRIVMLHQVTPHA--EASGMNM--PPDKFEQLLQLLVKKNAVFCFVS 78
N T W I+M H + A EA+ N+ PD FE ++ L ++ + F+S
Sbjct 72 NKTTWTKAEQPVKIPILMYHAIHNMAPEEAASANLIVAPDVFESHIKQLSEQG--YYFLS 129
Query 79 ELEQYRE-QKN------VVALSFDDGFMDNYVYAFPLLKKYQAKAT---IYLATQIEGIE 128
E YR KN VV L+FDD +D Y A+P+ KKYQAKAT I TQ +
Sbjct 130 PEEAYRVLSKNELPSDKVVWLTFDDSMIDFYRVAYPIWKKYQAKATNNVITGFTQNNSVA 189
Query 129 ALTVDQVQEMARSGFIEFGAHTQHHVNLLKLDDETAYQEMLHSKQDVE------TLVGAC 182
LT+DQ++EM + G + F HT +H +L + ++ T EM S + ++ T+ AC
Sbjct 190 NLTIDQMKEMKKHG-MSFQDHTVNHPDLSQQNEVTQNFEMQDSMEFLDKELSQKTIAIAC 248
Query 183 PSFAYPFGRFNEKHQQMARKIGFKNAVSTRK 213
P+ GR+++K ++A ++ +K V+T +
Sbjct 249 PA-----GRYSDKTLEIASRLNYKLGVTTNE 274
Score = 17.3 bits (33), Expect = 7.3
Identities = 9/31 (29%), Positives = 12/31 (39%), Gaps = 0/31 (0%)
Query 206 KNAVSTRKKIEPYDPEHPFNIPRVSTHGAMN 236
K+ T+ K E P IP + H N
Sbjct 65 KDTNQTKNKTTWTKAEQPVKIPILMYHAIHN 95
>Q8VUB1 NodB homology domain-containing protein [Lactococcus lactis]
Length=250
Score = 72.8 bits (177), Expect = 2e-18
Identities = 60/196 (31%), Positives = 94/196 (48%), Gaps = 16/196 (8%)
Query 25 TFWLP-YRSNALPRIVMLHQVTPHAEA---SGMNMPPDKFEQLLQLLVKKNAVFCFVSEL 80
T WL N LP I+M H VT A+ N+ FE L+ L + ++
Sbjct 3 TKWLTGTNENQLP-ILMFHYVTSRADQLPQDSNNINIVTFENELKALKSQGYTIVSGTDA 61
Query 81 EQYREQKN-----VVALSFDDGFMDNYVYAFPLLKKYQAKATIYLAT----QIEGIEALT 131
++ K +V L+FDDG + Y FPLLKKY AT ++ T + +G L+
Sbjct 62 QKILTTKEKPSDKMVWLTFDDGSVTMYTDIFPLLKKYNMHATNFIITGFVNKAQG-GILS 120
Query 132 VDQVQEMARSGFIEFGAHTQHHVNLLKLDDETAYQEMLHSKQDVE-TLVGACPSFAYPFG 190
+Q++EM SG ++FG+HT H +L E E+ SK D++ L YP G
Sbjct 121 WEQIKEMKASGLVDFGSHTVSHPDLGTQTLEAQRTELEQSKADLDKNLNQQTNMICYPAG 180
Query 191 RFNEKHQQMARKIGFK 206
+N+ ++ ++G+K
Sbjct 181 GYNQNTLSLSTELGYK 196
>O85100 Carbohydrate transporter [Escherichia coli]
Length=273
Score = 72.0 bits (175), Expect = 4e-18
Identities = 65/234 (28%), Positives = 107/234 (46%), Gaps = 45/234 (19%)
Query 38 IVMLHQVTPHAEASGM-NMPPDKFEQLLQLLVKKNAVFCFVSELEQYRE----QKNVVAL 92
++M H V+ G+ + P+ F + ++ L N +ELE + + + V L
Sbjct 9 VLMYHHVS---RCPGLVTLSPETFCEQMKWLADNNWRTVTSAELEYFYQGGTLPRKSVML 65
Query 93 SFDDGFMDNYVYAFPLLKKYQAKATIYLATQIEG----------------IEALTVD--- 133
+FDDG++DN++ A+P+LK+Y A I+L T + G E L D
Sbjct 66 TFDDGYLDNWLRAWPVLKEYNLHAHIFLITGLIGKGNVRSRQEQEYSHRDCERLIADNRS 125
Query 134 --------QVQEMARSGFIEFGAHTQHHVNLLKLDDETAYQ------EMLHSKQDVETLV 179
+V+EM SG +EF HT H +L A Q ++L KQ + +
Sbjct 126 DEVMLRWSEVREMRDSGLVEFHVHTHSHKRWDRLSVSRAEQCRLMKEDILVGKQCLTEKL 185
Query 180 GACPS-FAYPFGRFNEKHQQMARKIGFKNAVSTRKKIEPYDPEH-PFNIPRVST 231
G C S +P G +N + +A K+GF +T +++ PE+ I R+ST
Sbjct 186 GFCSSHLCWPEGYYNRDYINLAGKLGFSYLYTTERRMN--CPENGSLRIGRIST 237
>Q9X692 Shf [Escherichia coli]
Length=280
Score = 68.9 bits (167), Expect = 5e-17
Identities = 52/224 (23%), Positives = 103/224 (46%), Gaps = 41/224 (18%)
Query 30 YRSNALPRIVMLHQVTPHAEASGMNMPPDKFEQLLQLLVKKNAVFCFVSELEQY----RE 85
+++N +P ++M H V+ H + + P+ F + ++ L + N ELE + +
Sbjct 9 FKANHVP-VLMYHHVS-HCPGL-VTLSPETFRKQMKWLAENNWKTLSSDELEFFYRGGKL 65
Query 86 QKNVVALSFDDGFMDNYVYAFPLLKKYQAKATIYLATQIEG------------------- 126
+ V L+FDDG++DN+ +PLL ++ KA ++L T G
Sbjct 66 PRKSVMLTFDDGYLDNWFQVYPLLNEFNLKAHVFLITSFIGNGPVRHSPGKEYSHRDCEH 125
Query 127 --------IEALTVDQVQEMARSGFIEFGAHTQHHV----NLLKLDDETAY--QEMLHSK 172
L +V EM +SG +EF HT H +++ + Q++L +
Sbjct 126 QIATGNADNVMLRWSEVNEMLQSGLVEFHVHTYTHTRWDKKFTSREEQCKHLRQDLLSGR 185
Query 173 QDVETLVGACPS-FAYPFGRFNEKHQQMARKIGFKNAVSTRKKI 215
+ ++ + G C +P G +N+ + Q+A ++GF +T +++
Sbjct 186 EYLKKMTGKCSKHLCWPEGYYNKDYIQIAEELGFHYLYTTERRM 229
>G4Y1I4 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [Staphylococcus
capitis]
Length=287
Score = 67.0 bits (162), Expect = 3e-16
Identities = 52/203 (26%), Positives = 102/203 (50%), Gaps = 26/203 (13%)
Query 49 EASGMNMPPDKFEQLLQLLVKKNAVFCFVSELEQYREQ----KNVVALSFDDGFMDNYVY 104
E ++ +FE ++ L K +A F + E +Y+++ K V ++FDD MD +Y
Sbjct 70 EIKNYSVTDKEFESQIKWLKKHDAKFLTLKEFLKYKQKGKFPKRSVWINFDD--MDKTIY 127
Query 105 --AFPLLKKYQAKATIYLAT------QIEGIEALTVDQVQEMARSGFIEFGAHTQ----- 151
A+P+LKKY+ AT ++ T ++ +T Q+ +M RSG +F HT
Sbjct 128 QNAYPVLKKYKIPATGFVITGHIGEKNFHNLDMITQPQLSKMYRSGLWDFETHTNDLHSL 187
Query 152 ---HHVNLLKLDDETAYQEMLHSKQDVETLVGACP-SFAYPFGRFNEKHQQMARKIGFKN 207
+ L+ + +A +++ S+ ++++ G + AYP+G N Q ++ G K
Sbjct 188 KKGNKSKFLEASNVSATKDIEVSEDELKSKFGKTQHAIAYPYGLINNSKIQASKDAGMKY 247
Query 208 AVSTRKK-IEPYDPEHPFNIPRV 229
+ +++ + P+D + + IPR+
Sbjct 248 GFTLKEQAVTPHD--NNYKIPRI 268
>Q9AIQ6 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [Staphylococcus
caprae]
Length=289
Score = 64.3 bits (155), Expect = 2e-15
Identities = 49/200 (25%), Positives = 94/200 (47%), Gaps = 20/200 (10%)
Query 49 EASGMNMPPDKFEQLLQLLVKKNAVFCFVSELEQYREQ----KNVVALSFDDGFMDNYVY 104
E ++ +FE ++ L + +A F + E +Y+++ K V ++FDD Y
Sbjct 70 EIKNYSVTDKEFESQIKWLKEHDAKFLTLKEFLKYKKKGKFPKRSVWINFDDMDQTIYQN 129
Query 105 AFPLLKKYQAKATIYLAT------QIEGIEALTVDQVQEMARSGFIEFGAHT-------- 150
AFP+LKKY+ AT ++ T ++ +T Q+ EM R+G +F HT
Sbjct 130 AFPILKKYKIPATGFVITGHIGQQNFHNLDMMTQSQLSEMYRTGLWDFETHTNNLHSLKK 189
Query 151 QHHVNLLKLDDETAYQEMLHSKQDVETLVGACP-SFAYPFGRFNEKHQQMARKIGFKNAV 209
++ L+ + A +++ S+ ++ + G + AYP+G N Q ++ G K
Sbjct 190 ENKSKFLEASNPAATKDIEDSEDELNSKFGKNQHAIAYPYGLINNSKIQASKDAGMKYGF 249
Query 210 STRKKIEPYDPEHPFNIPRV 229
+ +K + + + IPR+
Sbjct 250 TLSEKAVTPNVNN-YKIPRI 268
>B8Y3Y6 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [Staphylococcus
haemolyticus]
Length=289
Score = 64.3 bits (155), Expect = 2e-15
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 26/203 (13%)
Query 49 EASGMNMPPDKFEQLLQLLVKKNAVFCFVSELEQYREQ----KNVVALSFDDGFMDNYVY 104
E ++ +F+ +Q L +A F + E +Y+E+ K V ++FDD MD +Y
Sbjct 70 EIKNYSVTDQEFKSQIQWLKAHDAKFLTLKEFIKYKEKGKFPKRSVWINFDD--MDQTIY 127
Query 105 --AFPLLKKYQAKATIYL------ATQIEGIEALTVDQVQEMARSGFIEFGAHTQHHVNL 156
AFP+LKKY AT +L +T + L+ Q+ EM +G +F +HT H ++
Sbjct 128 DNAFPVLKKYHIPATGFLITNHIGSTNFHNLNLLSKKQLDEMYETGLWDFESHT-HDLHA 186
Query 157 LKLDDETAYQEMLHS------KQDVETLVGACP----SFAYPFGRFNEKHQQMARKIGFK 206
LK +++ + + S K+ L P + AYP+G N+ + +K G +
Sbjct 187 LKKGNKSKFLDSSQSVASKDIKKSEHYLNKNYPKNERALAYPYGLINDDKIKAMKKNGIQ 246
Query 207 NAVSTRKKIEPYDPEHPFNIPRV 229
+ ++K D ++ + IPR+
Sbjct 247 YGFTLQEKAVTPDADN-YRIPRI 268
>Q6YI87 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [Staphylococcus
capitis]
Length=146
Score = 48.9 bits (115), Expect = 1e-10
Identities = 39/146 (27%), Positives = 72/146 (49%), Gaps = 23/146 (16%)
Query 74 FCFVSELEQYREQ----KNVVALSFDDGFMDNYVY--AFPLLKKYQAKATIYLAT----- 122
F + E +Y+++ K V ++FDD MD +Y A+P+LKKY+ AT ++ T
Sbjct 2 FLTLKEFLKYKQKGKFPKRSVWINFDD--MDKTIYQNAYPVLKKYKIPATGFVITGHVGE 59
Query 123 -QIEGIEALTVDQVQEMARSGFIEFGAHTQ--------HHVNLLKLDDETAYQEMLHSKQ 173
++ +T Q+ +M RSG +F HT + L+ + +A +++ S+
Sbjct 60 KNFHNLDMITQPQLSKMYRSGLWDFETHTNDLHSLKKGNKSKFLEASNVSATKDIEVSED 119
Query 174 DVETLVGACP-SFAYPFGRFNEKHQQ 198
++++ G + AYP+G N Q
Sbjct 120 ELKSKFGKTQHAIAYPYGLINNSKIQ 145
>P72436 Shf1 [Shigella flexneri]
Length=132
Score = 48.1 bits (113), Expect = 2e-10
Identities = 31/101 (31%), Positives = 55/101 (54%), Gaps = 7/101 (7%)
Query 30 YRSNALPRIVMLHQVTPHAEASGMNMPPDKFEQLLQLLVKKNAVFCFVSELEQY----RE 85
+++N +P ++M H V+ H + + P F + ++ L + N ELE + +
Sbjct 9 FKANHVP-VLMYHHVS-HCPGL-VTLSPVTFRKQIKWLAENNWKTLSSDELEFFYRGGKL 65
Query 86 QKNVVALSFDDGFMDNYVYAFPLLKKYQAKATIYLATQIEG 126
+ V L+FDDG++DN+ +PLLK++ KA I+L T G
Sbjct 66 PRKSVMLTFDDGYLDNWFQVYPLLKEFNLKAHIFLITGFIG 106
Lambda K H a alpha
0.326 0.139 0.417 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1060461
Database: 29d25c9ca0541030dc162e67fad54ffc.TrEMBL.fasta
Posted date: May 10, 2024 12:10 AM
Number of letters in database: 6,248
Number of sequences in database: 25
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
