BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: e86ea85275a90ce1e9c55763c32366e7.SwissProt.fasta
1 sequences; 696 total letters
Query= ACIAD0605
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
A0A0H2URH7 Glycosyltransferase GlyA [Streptococcus pneumoniae ser... 36.2 1e-06
>A0A0H2URH7 Glycosyltransferase GlyA [Streptococcus pneumoniae
serotype 4 (strain ATCC BAA-334 / TIGR4)]
Length=696
Score = 36.2 bits (82), Expect = 1e-06
Identities = 26/105 (25%), Positives = 44/105 (42%), Gaps = 2/105 (2%)
Query 3 VAMVVIVYNKALNESTTLQSLLTFTHAIQELVIVNNGPEQLDEDEFFFALKQKHSQVYLE 62
+ ++V VYN L S++T T+ E+V+VN+G + + H +Y+E
Sbjct 7 ITVIVPVYNVENYLRKCLDSIITQTYKNIEIVVVNDGSTDASGEICKEFSEMDHRILYIE 66
Query 63 NYLQNKPLSWIYNDLIEKYDADYYVLFDDDTIINSQYENHLFNTL 107
+N LS N + +Y D D I Y L+ +
Sbjct 67 Q--ENAGLSAARNTGLNNMSGNYVTFVDSDDWIEQDYVETLYKKI 109
Score = 15.8 bits (29), Expect = 3.0
Identities = 18/58 (31%), Positives = 27/58 (47%), Gaps = 10/58 (17%)
Query 87 VLFDDD-TIINSQY--ENHLFNTLDQTDIEFPKIFARVEHVQHFPVLNNALLKDSGEL 141
+L DD T+I Y EN+L LD + + +E V V+N+ SGE+
Sbjct 1 MLVDDKITVIVPVYNVENYLRKCLDSI---ITQTYKNIEIV----VVNDGSTDASGEI 51
Score = 14.6 bits (26), Expect = 6.9
Identities = 9/26 (35%), Positives = 13/26 (50%), Gaps = 0/26 (0%)
Query 18 TTLQSLLTFTHAIQELVIVNNGPEQL 43
T +QSL I VIV++ Q+
Sbjct 586 TLVQSLPDIQFKIAARVIVSDRLAQM 611
Lambda K H a alpha
0.326 0.141 0.419 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 164672
Database: e86ea85275a90ce1e9c55763c32366e7.SwissProt.fasta
Posted date: May 10, 2024 2:48 AM
Number of letters in database: 696
Number of sequences in database: 1
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40