BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 29d556cca2488eb7f4acc8416db38620.TrEMBL.fasta
14 sequences; 2,324 total letters
Query= ACIAD0655
Length=157
Score E
Sequences producing significant alignments: (Bits) Value
Q6FED4 DUF4154 domain-containing protein [Acinetobacter baylyi (s... 311 1e-114
A0A7G2SCZ7 DUF4154 domain-containing protein [Acinetobacter sp] 311 1e-114
A0A1P8EN19 YfiR family protein [Acinetobacter soli] 226 1e-80
N9BRZ8 DUF4154 domain-containing protein [Acinetobacter soli NIPH... 226 3e-80
A0A427M1Y1 YfiR family protein [Acinetobacter soli] 223 2e-79
A0A0M1HLJ3 DUF4154 domain-containing protein [Acinetobacter sp. C15] 222 2e-79
N9DLC0 DUF4154 domain-containing protein [Acinetobacter ursingii ... 212 2e-75
A0A7T9UJ01 YfiR family protein [Acinetobacter ursingii] 212 2e-75
A0A3D2SLR3 DUF4154 domain-containing protein [Acinetobacter ursin... 211 5e-75
A0A009ZTY8 YfiR family protein [Acinetobacter sp. 479375] 211 6e-75
A0A3R9D7K4 YfiR family protein [Acinetobacter sp. FDAARGOS_515] 211 7e-75
A0A3A8EHT4 YfiR family protein [Acinetobacter guerrae] 209 2e-74
Q8KJS9 DUF4154 domain-containing protein [Pseudomonas syringae] 79.7 7e-23
Q9I4L4 Negative regulator YfiR [Pseudomonas aeruginosa (strain AT... 68.6 1e-18
>Q6FED4 DUF4154 domain-containing protein [Acinetobacter baylyi
(strain ATCC 33305 / BD413 / ADP1)]
Length=156
Score = 311 bits (797), Expect = 1e-114
Identities = 155/156 (99%), Positives = 156/156 (100%), Gaps = 0/156 (0%)
Query 1 LSLLYIFTRACFASPIQNFYALTLSIMSYSKWPADNVPTLCIIDNPTVANSFQSQVKQQS 60
+SLLYIFTRACFASPIQNFYALTLSIMSYSKWPADNVPTLCIIDNPTVANSFQSQVKQQS
Sbjct 1 MSLLYIFTRACFASPIQNFYALTLSIMSYSKWPADNVPTLCIIDNPTVANSFQSQVKQQS 60
Query 61 YSYKIQAIPASSFSKTQCQAVYFSNLSPQQQQNLINSYPTRNVLSFSSNNSDCEIGSIFC 120
YSYKIQAIPASSFSKTQCQAVYFSNLSPQQQQNLINSYPTRNVLSFSSNNSDCEIGSIFC
Sbjct 61 YSYKIQAIPASSFSKTQCQAVYFSNLSPQQQQNLINSYPTRNVLSFSSNNSDCEIGSIFC 120
Query 121 LYQQKGNATFKVNLDSLSRSQIRIDPRVLLLAKNAE 156
LYQQKGNATFKVNLDSLSRSQIRIDPRVLLLAKNAE
Sbjct 121 LYQQKGNATFKVNLDSLSRSQIRIDPRVLLLAKNAE 156
>A0A7G2SCZ7 DUF4154 domain-containing protein [Acinetobacter sp]
Length=156
Score = 311 bits (797), Expect = 1e-114
Identities = 155/156 (99%), Positives = 156/156 (100%), Gaps = 0/156 (0%)
Query 1 LSLLYIFTRACFASPIQNFYALTLSIMSYSKWPADNVPTLCIIDNPTVANSFQSQVKQQS 60
+SLLYIFTRACFASPIQNFYALTLSIMSYSKWPADNVPTLCIIDNPTVANSFQSQVKQQS
Sbjct 1 MSLLYIFTRACFASPIQNFYALTLSIMSYSKWPADNVPTLCIIDNPTVANSFQSQVKQQS 60
Query 61 YSYKIQAIPASSFSKTQCQAVYFSNLSPQQQQNLINSYPTRNVLSFSSNNSDCEIGSIFC 120
YSYKIQAIPASSFSKTQCQAVYFSNLSPQQQQNLINSYPTRNVLSFSSNNSDCEIGSIFC
Sbjct 61 YSYKIQAIPASSFSKTQCQAVYFSNLSPQQQQNLINSYPTRNVLSFSSNNSDCEIGSIFC 120
Query 121 LYQQKGNATFKVNLDSLSRSQIRIDPRVLLLAKNAE 156
LYQQKGNATFKVNLDSLSRSQIRIDPRVLLLAKNAE
Sbjct 121 LYQQKGNATFKVNLDSLSRSQIRIDPRVLLLAKNAE 156
>A0A1P8EN19 YfiR family protein [Acinetobacter soli]
Length=167
Score = 226 bits (575), Expect = 1e-80
Identities = 110/156 (71%), Positives = 130/156 (83%), Gaps = 0/156 (0%)
Query 1 LSLLYIFTRACFASPIQNFYALTLSIMSYSKWPADNVPTLCIIDNPTVANSFQSQVKQQS 60
L+LL + FASP+QNFY LTLSIMSYSK + TLC+IDNP A FQ+Q+KQ +
Sbjct 12 LTLLCLSMEVSFASPVQNFYTLTLSIMSYSKLSTGSNTTLCVIDNPAAAGIFQTQIKQST 71
Query 61 YSYKIQAIPASSFSKTQCQAVYFSNLSPQQQQNLINSYPTRNVLSFSSNNSDCEIGSIFC 120
Y YK+Q+IPA+SF KTQCQAVYFS+ +P QQ+ LINSYP+ ++LSFS+NN DCEIGSIFC
Sbjct 72 YGYKVQSIPAASFVKTQCQAVYFSSQTPAQQEALINSYPSHSLLSFSANNIDCEIGSIFC 131
Query 121 LYQQKGNATFKVNLDSLSRSQIRIDPRVLLLAKNAE 156
LYQQKG +TFKVNLD+LSRSQIRIDPRVLLLAKNAE
Sbjct 132 LYQQKGKSTFKVNLDTLSRSQIRIDPRVLLLAKNAE 167
>N9BRZ8 DUF4154 domain-containing protein [Acinetobacter soli
NIPH 2899]
Length=191
Score = 226 bits (575), Expect = 3e-80
Identities = 110/156 (71%), Positives = 130/156 (83%), Gaps = 0/156 (0%)
Query 1 LSLLYIFTRACFASPIQNFYALTLSIMSYSKWPADNVPTLCIIDNPTVANSFQSQVKQQS 60
L+LL + FASP+QNFY LTLSIMSYSK + TLC+IDNP A FQ+Q+KQ +
Sbjct 36 LTLLCLSMEVSFASPVQNFYTLTLSIMSYSKLSTGSNTTLCVIDNPAAAGIFQTQIKQST 95
Query 61 YSYKIQAIPASSFSKTQCQAVYFSNLSPQQQQNLINSYPTRNVLSFSSNNSDCEIGSIFC 120
Y YK+Q+IPA+SF KTQCQAVYFS+ +P QQ+ LINSYP+ ++LSFS+NN DCEIGSIFC
Sbjct 96 YGYKVQSIPAASFVKTQCQAVYFSSQTPAQQEALINSYPSHSLLSFSTNNIDCEIGSIFC 155
Query 121 LYQQKGNATFKVNLDSLSRSQIRIDPRVLLLAKNAE 156
LYQQKG +TFKVNLD+LSRSQIRIDPRVLLLAKNAE
Sbjct 156 LYQQKGKSTFKVNLDTLSRSQIRIDPRVLLLAKNAE 191
>A0A427M1Y1 YfiR family protein [Acinetobacter soli]
Length=191
Score = 223 bits (569), Expect = 2e-79
Identities = 109/156 (70%), Positives = 129/156 (83%), Gaps = 0/156 (0%)
Query 1 LSLLYIFTRACFASPIQNFYALTLSIMSYSKWPADNVPTLCIIDNPTVANSFQSQVKQQS 60
L+LL + FA P+QNFY LTLSIMSYSK + TLC+IDNP A FQ+Q+KQ +
Sbjct 36 LTLLCLSMEVSFALPVQNFYTLTLSIMSYSKLSTGSNTTLCVIDNPAAAGIFQTQIKQST 95
Query 61 YSYKIQAIPASSFSKTQCQAVYFSNLSPQQQQNLINSYPTRNVLSFSSNNSDCEIGSIFC 120
Y YK+Q+IPA+SF KTQCQAVYFS+ +P QQ+ LINSYP+ ++LSFS+NN DCEIGSIFC
Sbjct 96 YGYKVQSIPAASFVKTQCQAVYFSSQTPAQQEALINSYPSHSLLSFSANNIDCEIGSIFC 155
Query 121 LYQQKGNATFKVNLDSLSRSQIRIDPRVLLLAKNAE 156
LYQQKG +TFKVNLD+LSRSQIRIDPRVLLLAKNAE
Sbjct 156 LYQQKGKSTFKVNLDTLSRSQIRIDPRVLLLAKNAE 191
>A0A0M1HLJ3 DUF4154 domain-containing protein [Acinetobacter sp.
C15]
Length=149
Score = 222 bits (565), Expect = 2e-79
Identities = 107/145 (74%), Positives = 124/145 (86%), Gaps = 0/145 (0%)
Query 12 FASPIQNFYALTLSIMSYSKWPADNVPTLCIIDNPTVANSFQSQVKQQSYSYKIQAIPAS 71
FASP+QNFY LTLSIMSYSK TLC+IDNP A FQ+Q+KQ +Y YK+Q+IPA+
Sbjct 5 FASPVQNFYTLTLSIMSYSKLSTGTNTTLCVIDNPAAAGIFQTQIKQSTYGYKVQSIPAA 64
Query 72 SFSKTQCQAVYFSNLSPQQQQNLINSYPTRNVLSFSSNNSDCEIGSIFCLYQQKGNATFK 131
SF KTQCQAVYFS+ +P QQ+ LINSYP+ ++LSFS+NN DCEIGSIFCLYQQKG +TFK
Sbjct 65 SFVKTQCQAVYFSSQTPAQQEALINSYPSHSLLSFSANNIDCEIGSIFCLYQQKGKSTFK 124
Query 132 VNLDSLSRSQIRIDPRVLLLAKNAE 156
VNLD+LSRSQIRIDPRVLLLAKNAE
Sbjct 125 VNLDTLSRSQIRIDPRVLLLAKNAE 149
>N9DLC0 DUF4154 domain-containing protein [Acinetobacter ursingii
ANC 3649]
Length=155
Score = 212 bits (540), Expect = 2e-75
Identities = 102/154 (66%), Positives = 122/154 (79%), Gaps = 3/154 (2%)
Query 6 IFTRACFASP---IQNFYALTLSIMSYSKWPADNVPTLCIIDNPTVANSFQSQVKQQSYS 62
+ AC P + N Y+LTL+I+SYSKWP + PTLC+IDNP +FQSQVKQ +Y
Sbjct 2 VILMACETVPAVSVHNAYSLTLAILSYSKWPNNITPTLCVIDNPVATAAFQSQVKQSAYE 61
Query 63 YKIQAIPASSFSKTQCQAVYFSNLSPQQQQNLINSYPTRNVLSFSSNNSDCEIGSIFCLY 122
Y IQ + A +FSK+QCQAVYFSNL+PQQQQNL+N+YP RN+LSFS+NN DCE GSIFCLY
Sbjct 62 YHIQGLSAVNFSKSQCQAVYFSNLTPQQQQNLVNAYPQRNLLSFSNNNPDCETGSIFCLY 121
Query 123 QQKGNATFKVNLDSLSRSQIRIDPRVLLLAKNAE 156
Q+G TFKVNLDSLS SQ+ IDPRVLLLA+NAE
Sbjct 122 TQRGLTTFKVNLDSLSYSQVHIDPRVLLLARNAE 155
>A0A7T9UJ01 YfiR family protein [Acinetobacter ursingii]
Length=155
Score = 212 bits (540), Expect = 2e-75
Identities = 102/154 (66%), Positives = 122/154 (79%), Gaps = 3/154 (2%)
Query 6 IFTRACFASP---IQNFYALTLSIMSYSKWPADNVPTLCIIDNPTVANSFQSQVKQQSYS 62
+ AC P + N Y+LTL+I+SYSKWP + PTLC+IDNP +FQSQVKQ +Y
Sbjct 2 VILMACETVPAVSVHNAYSLTLAILSYSKWPNNITPTLCVIDNPVATAAFQSQVKQSAYE 61
Query 63 YKIQAIPASSFSKTQCQAVYFSNLSPQQQQNLINSYPTRNVLSFSSNNSDCEIGSIFCLY 122
Y IQ + A +FSK+QCQAVYFSNL+PQQQQNL+N+YP RN+LSFS+NN DCE GSIFCLY
Sbjct 62 YHIQGLSAVNFSKSQCQAVYFSNLTPQQQQNLVNAYPQRNLLSFSNNNPDCETGSIFCLY 121
Query 123 QQKGNATFKVNLDSLSRSQIRIDPRVLLLAKNAE 156
Q+G TFKVNLDSLS SQ+ IDPRVLLLA+NAE
Sbjct 122 TQRGLTTFKVNLDSLSYSQVHIDPRVLLLARNAE 155
>A0A3D2SLR3 DUF4154 domain-containing protein [Acinetobacter ursingii]
Length=155
Score = 211 bits (537), Expect = 5e-75
Identities = 101/154 (66%), Positives = 122/154 (79%), Gaps = 3/154 (2%)
Query 6 IFTRACFASP---IQNFYALTLSIMSYSKWPADNVPTLCIIDNPTVANSFQSQVKQQSYS 62
+ AC P + N Y+LTL+I+SYSKWP + PTLC+IDNP +FQSQVKQ +Y
Sbjct 2 VILMACETVPAVSVHNAYSLTLAILSYSKWPNNITPTLCVIDNPVATAAFQSQVKQSAYE 61
Query 63 YKIQAIPASSFSKTQCQAVYFSNLSPQQQQNLINSYPTRNVLSFSSNNSDCEIGSIFCLY 122
Y IQ + A +FSK+QCQAVYFSNL+PQQQQNL+N+YP RN+LSFS+NN DCE GSIFCLY
Sbjct 62 YHIQGLSAVNFSKSQCQAVYFSNLTPQQQQNLVNAYPQRNLLSFSNNNPDCETGSIFCLY 121
Query 123 QQKGNATFKVNLDSLSRSQIRIDPRVLLLAKNAE 156
Q+G TFKVNLD+LS SQ+ IDPRVLLLA+NAE
Sbjct 122 TQRGLTTFKVNLDALSYSQVHIDPRVLLLARNAE 155
>A0A009ZTY8 YfiR family protein [Acinetobacter sp. 479375]
Length=151
Score = 211 bits (536), Expect = 6e-75
Identities = 99/144 (69%), Positives = 119/144 (83%), Gaps = 0/144 (0%)
Query 13 ASPIQNFYALTLSIMSYSKWPADNVPTLCIIDNPTVANSFQSQVKQQSYSYKIQAIPASS 72
A + N Y+LTL+I+SYSKWP + PTLC+IDNP +FQSQVKQ +Y Y IQ + A +
Sbjct 8 AVSVHNAYSLTLAILSYSKWPNNITPTLCVIDNPVATAAFQSQVKQSAYEYHIQGLSAVN 67
Query 73 FSKTQCQAVYFSNLSPQQQQNLINSYPTRNVLSFSSNNSDCEIGSIFCLYQQKGNATFKV 132
FSK+QCQAVYFSNL+PQQQQNL+N+YP RN+LSFS+NN DCE GSIFCLY Q+G TFKV
Sbjct 68 FSKSQCQAVYFSNLTPQQQQNLVNAYPQRNLLSFSNNNPDCETGSIFCLYTQRGLTTFKV 127
Query 133 NLDSLSRSQIRIDPRVLLLAKNAE 156
NLD+LS SQ+ IDPRVLLLA+NAE
Sbjct 128 NLDALSYSQVHIDPRVLLLARNAE 151
>A0A3R9D7K4 YfiR family protein [Acinetobacter sp. FDAARGOS_515]
Length=155
Score = 211 bits (536), Expect = 7e-75
Identities = 99/144 (69%), Positives = 119/144 (83%), Gaps = 0/144 (0%)
Query 13 ASPIQNFYALTLSIMSYSKWPADNVPTLCIIDNPTVANSFQSQVKQQSYSYKIQAIPASS 72
A + N Y+LTL+I+SYSKWP + PTLC+IDNP +FQSQVKQ +Y Y IQ + A +
Sbjct 12 AVSVHNAYSLTLAILSYSKWPNNITPTLCVIDNPVATAAFQSQVKQSAYEYHIQGLSAVN 71
Query 73 FSKTQCQAVYFSNLSPQQQQNLINSYPTRNVLSFSSNNSDCEIGSIFCLYQQKGNATFKV 132
FSK+QCQAVYFSNL+PQQQQNL+N+YP RN+LSFS+NN DCE GSIFCLY Q+G TFKV
Sbjct 72 FSKSQCQAVYFSNLTPQQQQNLVNAYPQRNLLSFSNNNPDCETGSIFCLYTQRGLTTFKV 131
Query 133 NLDSLSRSQIRIDPRVLLLAKNAE 156
NLD+LS SQ+ IDPRVLLLA+NAE
Sbjct 132 NLDALSYSQVHIDPRVLLLARNAE 155
>A0A3A8EHT4 YfiR family protein [Acinetobacter guerrae]
Length=155
Score = 209 bits (533), Expect = 2e-74
Identities = 98/144 (68%), Positives = 120/144 (83%), Gaps = 0/144 (0%)
Query 13 ASPIQNFYALTLSIMSYSKWPADNVPTLCIIDNPTVANSFQSQVKQQSYSYKIQAIPASS 72
A + N Y+LTL+I+SYS+WP + PTLC+IDNP+ +FQ+Q+KQ SY Y IQ + A++
Sbjct 12 AVSMHNAYSLTLAILSYSRWPNNITPTLCVIDNPSATIAFQNQIKQSSYEYHIQNLTATN 71
Query 73 FSKTQCQAVYFSNLSPQQQQNLINSYPTRNVLSFSSNNSDCEIGSIFCLYQQKGNATFKV 132
F K QCQAVYFSNL+PQQQQNLIN+YP +N+LSFS+NNSDCEIGSIFCLY Q G TFKV
Sbjct 72 FPKAQCQAVYFSNLTPQQQQNLINAYPQKNLLSFSNNNSDCEIGSIFCLYTQNGLTTFKV 131
Query 133 NLDSLSRSQIRIDPRVLLLAKNAE 156
NLD+LS SQ+ IDPRVLLLA+NAE
Sbjct 132 NLDALSHSQVHIDPRVLLLARNAE 155
>Q8KJS9 DUF4154 domain-containing protein [Pseudomonas syringae]
Length=198
Score = 79.7 bits (195), Expect = 7e-23
Identities = 45/135 (33%), Positives = 70/135 (52%), Gaps = 3/135 (2%)
Query 22 LTLSIMSYSKWPADNVPTLCIIDNPTVANSFQSQVKQQSYSYKIQA---IPASSFSKTQC 78
+ L I+SY++WP + + PT Q QS ++Q + ++ +C
Sbjct 58 VVLGILSYARWPIEPAQMQLCVVGPTEYTDDLLQGATQSSGRQVQVRRMLVSNPAIAREC 117
Query 79 QAVYFSNLSPQQQQNLINSYPTRNVLSFSSNNSDCEIGSIFCLYQQKGNATFKVNLDSLS 138
AVY LS ++ +L +S + VLS S C +GS+FCL TF+VNLDS++
Sbjct 118 NAVYLGKLSTAERSSLFSSLSGQAVLSISEYGDQCTVGSLFCLRVTDEQVTFEVNLDSVA 177
Query 139 RSQIRIDPRVLLLAK 153
RS +RI P VL L++
Sbjct 178 RSGVRIHPSVLQLSR 192
>Q9I4L4 Negative regulator YfiR [Pseudomonas aeruginosa (strain
ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228
/ 1C / PRS 101 / PAO1)]
Length=190
Score = 68.6 bits (166), Expect = 1e-18
Identities = 41/134 (31%), Positives = 66/134 (49%), Gaps = 5/134 (4%)
Query 24 LSIMSYSKWPADN-VPTLCIIDNPTVANSF---QSQVKQQSYSYKIQAIPASSFSKTQCQ 79
L I SY +WP + V LC++ A+ Q + + +A+ T C
Sbjct 53 LGIFSYVRWPKEPAVLQLCVVGPTEYADGLLRGMVQANGRRVHAERRAVDNPDLG-TLCN 111
Query 80 AVYFSNLSPQQQQNLINSYPTRNVLSFSSNNSDCEIGSIFCLYQQKGNATFKVNLDSLSR 139
+Y + +++Q + S VLS S ++C +GS+FCL TF+ NLDS++R
Sbjct 112 VIYLGVVDERERQQVFRSLAGHPVLSISERGTECSVGSMFCLNVGGPRITFEANLDSIAR 171
Query 140 SQIRIDPRVLLLAK 153
S +R+ P VL LA+
Sbjct 172 SGVRVHPSVLKLAR 185
Score = 17.7 bits (34), Expect = 1.1
Identities = 17/68 (25%), Positives = 25/68 (37%), Gaps = 13/68 (19%)
Query 97 SYPTRNVLSFSSNNSDCEIGSIFCL-------------YQQKGNATFKVNLDSLSRSQIR 143
S PT L C + ++ CL +Q+ NA +V L S +
Sbjct 3 SLPTLQPLDLYRRTLACLVLAVSCLGGGGLWADDARTSIEQRSNAVSQVLLGIFSYVRWP 62
Query 144 IDPRVLLL 151
+P VL L
Sbjct 63 KEPAVLQL 70
Lambda K H a alpha
0.323 0.132 0.387 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 227304
Database: 29d556cca2488eb7f4acc8416db38620.TrEMBL.fasta
Posted date: Jun 2, 2024 8:45 PM
Number of letters in database: 2,324
Number of sequences in database: 14
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
