Comparative Genomics

ACIAD0679 / TrEMBL Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: f5a72b3127d2e45dbcaf114ad7c55823.TrEMBL.fasta
           11 sequences; 2,928 total letters



Query= ACIAD0679

Length=271
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

A0A7G2SE35 Ribosomal RNA small subunit methyltransferase J [Acine...  546     0.0   
A0A013S0M6 Ribosomal RNA small subunit methyltransferase J [Acine...  412     5e-151
A0A1P8EJH2 Ribosomal RNA small subunit methyltransferase J [Acine...  412     1e-150
A0A2M8MGH3 Ribosomal RNA small subunit methyltransferase J [Acine...  411     2e-150
N9BXF5 Ribosomal RNA small subunit methyltransferase J [Acinetoba...  411     2e-150
A0A427LLP8 Ribosomal RNA small subunit methyltransferase J [Acine...  411     2e-150
A0A242U723 Ribosomal RNA small subunit methyltransferase J [Acine...  409     1e-149
A0A1S8XF18 Ribosomal RNA small subunit methyltransferase J [Acine...  408     3e-149
A0A0M1I4R4 Ribosomal RNA small subunit methyltransferase J [Acine...  408     3e-149
A0A6H2VM22 Ribosomal RNA small subunit methyltransferase J [Acine...  408     4e-149
R8YDK2 Ribosomal RNA small subunit methyltransferase J [Acinetoba...  407     5e-149


>A0A7G2SE35 Ribosomal RNA small subunit methyltransferase J [Acinetobacter 
sp]
Length=270

 Score = 546 bits (1406),  Expect = 0.0
 Identities = 270/270 (100%), Positives = 270/270 (100%), Gaps = 0/270 (0%)

Query  1    MVKPMHLFAVVDALEQAQQFQQVLASRDVSTELVQIEQLNARFLRHHPELALCVDLDGLW  60
            MVKPMHLFAVVDALEQAQQFQQVLASRDVSTELVQIEQLNARFLRHHPELALCVDLDGLW
Sbjct  1    MVKPMHLFAVVDALEQAQQFQQVLASRDVSTELVQIEQLNARFLRHHPELALCVDLDGLW  60

Query  61   LSANGMKMQPDWQAEIPRLKRASLKSEMIARACQINEQPSLIDATAGLGHDSLLMAYLGA  120
            LSANGMKMQPDWQAEIPRLKRASLKSEMIARACQINEQPSLIDATAGLGHDSLLMAYLGA
Sbjct  61   LSANGMKMQPDWQAEIPRLKRASLKSEMIARACQINEQPSLIDATAGLGHDSLLMAYLGA  120

Query  121  HVTLVERHPVLFTLLEDAKSKAENDPFLSKYMQRIHLIFQDAHYYLQQCNQDDRKVDVIY  180
            HVTLVERHPVLFTLLEDAKSKAENDPFLSKYMQRIHLIFQDAHYYLQQCNQDDRKVDVIY
Sbjct  121  HVTLVERHPVLFTLLEDAKSKAENDPFLSKYMQRIHLIFQDAHYYLQQCNQDDRKVDVIY  180

Query  181  LDPMFPQRDQHHQVIKKQAQVKKQMQLLHLLLPEDGEMDLGDQLLPLAQQIASRVVVKRP  240
            LDPMFPQRDQHHQVIKKQAQVKKQMQLLHLLLPEDGEMDLGDQLLPLAQQIASRVVVKRP
Sbjct  181  LDPMFPQRDQHHQVIKKQAQVKKQMQLLHLLLPEDGEMDLGDQLLPLAQQIASRVVVKRP  240

Query  241  KHAVFLNEQQPDHQWQGDACRFDAYFQISM  270
            KHAVFLNEQQPDHQWQGDACRFDAYFQISM
Sbjct  241  KHAVFLNEQQPDHQWQGDACRFDAYFQISM  270


>A0A013S0M6 Ribosomal RNA small subunit methyltransferase J [Acinetobacter 
sp. 742879]
Length=263

 Score = 412 bits (1060),  Expect = 5e-151
 Identities = 198/263 (75%), Positives = 232/263 (88%), Gaps = 0/263 (0%)

Query  5    MHLFAVVDALEQAQQFQQVLASRDVSTELVQIEQLNARFLRHHPELALCVDLDGLWLSAN  64
            MH++   D  EQAQ +Q VL SR V+ +L  IE+LNARFLR +PE+ALCVD +GLWLSAN
Sbjct  1    MHIYFEQDFQEQAQHYQAVLCSRGVTVDLKPIEKLNARFLRFNPEIALCVDENGLWLSAN  60

Query  65   GMKMQPDWQAEIPRLKRASLKSEMIARACQINEQPSLIDATAGLGHDSLLMAYLGAHVTL  124
            GMKMQPDW+AEIPRLKRASLKSEMIARACQ+ E+P L+DATAGLGHDSLLMAYLGA + L
Sbjct  61   GMKMQPDWKAEIPRLKRASLKSEMIARACQLGEKPILVDATAGLGHDSLLMAYLGAQIQL  120

Query  125  VERHPVLFTLLEDAKSKAENDPFLSKYMQRIHLIFQDAHYYLQQCNQDDRKVDVIYLDPM  184
            VERHP+LFTLLED+K++AE+DPFLS++M RI LIF D+  YLQQ +Q++++VDV+YLDPM
Sbjct  121  VERHPILFTLLEDSKAQAEHDPFLSQFMDRIQLIFADSASYLQQLDQEEKRVDVVYLDPM  180

Query  185  FPQRDQHHQVIKKQAQVKKQMQLLHLLLPEDGEMDLGDQLLPLAQQIASRVVVKRPKHAV  244
            FPQRDQ+HQ IKKQAQVKKQMQLLHLLLPEDGEMDLGD LL LAQ++A RVVVKRP+HA+
Sbjct  181  FPQRDQNHQAIKKQAQVKKQMQLLHLLLPEDGEMDLGDNLLVLAQKVAKRVVVKRPRHAI  240

Query  245  FLNEQQPDHQWQGDACRFDAYFQ  267
            FL  Q+P HQWQGDACRFDAYFQ
Sbjct  241  FLANQEPAHQWQGDACRFDAYFQ  263


>A0A1P8EJH2 Ribosomal RNA small subunit methyltransferase J [Acinetobacter 
soli]
Length=270

 Score = 412 bits (1058),  Expect = 1e-150
 Identities = 203/270 (75%), Positives = 228/270 (84%), Gaps = 0/270 (0%)

Query  1    MVKPMHLFAVVDALEQAQQFQQVLASRDVSTELVQIEQLNARFLRHHPELALCVDLDGLW  60
            MV PM L+AV +  +QA+  QQ+L +R V TEL++IEQLNARFLR HPELALCVD  GLW
Sbjct  1    MVNPMRLYAVAEVKDQAEAVQQLLQTRGVVTELIEIEQLNARFLRQHPELALCVDHAGLW  60

Query  61   LSANGMKMQPDWQAEIPRLKRASLKSEMIARACQINEQPSLIDATAGLGHDSLLMAYLGA  120
            LSANGMKMQPDW AEIPRLKRASLKSEMIARACQ++EQP LIDATAGLGHD LLMA LGA
Sbjct  61   LSANGMKMQPDWMAEIPRLKRASLKSEMIARACQLSEQPHLIDATAGLGHDGLLMASLGA  120

Query  121  HVTLVERHPVLFTLLEDAKSKAENDPFLSKYMQRIHLIFQDAHYYLQQCNQDDRKVDVIY  180
             VTLVERHP+LFTLLE AK +AE D +L+  M R+HLIF DA  YL Q  +     DV+Y
Sbjct  121  EVTLVERHPILFTLLEFAKQQAEQDAYLAPVMARMHLIFSDAADYLTQRIEQQAITDVVY  180

Query  181  LDPMFPQRDQHHQVIKKQAQVKKQMQLLHLLLPEDGEMDLGDQLLPLAQQIASRVVVKRP  240
            LDPMFPQRDQH Q  KKQAQVKKQMQLLHLLLPEDG+MDLGDQLL LA+Q+A RVVVKRP
Sbjct  181  LDPMFPQRDQHQQAAKKQAQVKKQMQLLHLLLPEDGQMDLGDQLLALARQMAKRVVVKRP  240

Query  241  KHAVFLNEQQPDHQWQGDACRFDAYFQISM  270
            +HAVFLN++ PDHQWQGDACRFDAYFQ+S+
Sbjct  241  RHAVFLNDETPDHQWQGDACRFDAYFQLSL  270


>A0A2M8MGH3 Ribosomal RNA small subunit methyltransferase J [Acinetobacter 
seifertii]
Length=263

 Score = 411 bits (1057),  Expect = 2e-150
 Identities = 197/263 (75%), Positives = 233/263 (89%), Gaps = 0/263 (0%)

Query  5    MHLFAVVDALEQAQQFQQVLASRDVSTELVQIEQLNARFLRHHPELALCVDLDGLWLSAN  64
            MH++  VD  EQAQ +Q VL+SRDVS +L  IE+LNARFLR +PELALCVD +GLWLSAN
Sbjct  1    MHIYFEVDYQEQAQHYQAVLSSRDVSVDLQPIEKLNARFLRLNPELALCVDENGLWLSAN  60

Query  65   GMKMQPDWQAEIPRLKRASLKSEMIARACQINEQPSLIDATAGLGHDSLLMAYLGAHVTL  124
            GMKMQPDW+AEIPRLKRASLKSEMIARACQ+ E+P L+DATAGLGHDSLLMAYLGA + L
Sbjct  61   GMKMQPDWKAEIPRLKRASLKSEMIARACQLGEKPVLVDATAGLGHDSLLMAYLGAQIQL  120

Query  125  VERHPVLFTLLEDAKSKAENDPFLSKYMQRIHLIFQDAHYYLQQCNQDDRKVDVIYLDPM  184
            VERHP+LFTLLED+K++A++DPFL+++M+RI L+F D+  YLQQ +Q+ + VDV+YLDPM
Sbjct  121  VERHPILFTLLEDSKAQAQHDPFLNQFMERIQLVFADSASYLQQLDQEAKTVDVVYLDPM  180

Query  185  FPQRDQHHQVIKKQAQVKKQMQLLHLLLPEDGEMDLGDQLLPLAQQIASRVVVKRPKHAV  244
            FPQRDQ+ Q IKKQAQVKKQMQLLHLLLPEDGEMDLGD LL LAQ++A RV+VKRP+HA+
Sbjct  181  FPQRDQNQQAIKKQAQVKKQMQLLHLLLPEDGEMDLGDNLLELAQKVAKRVIVKRPRHAI  240

Query  245  FLNEQQPDHQWQGDACRFDAYFQ  267
            FL  Q+P HQWQGDACRFDAYFQ
Sbjct  241  FLANQEPAHQWQGDACRFDAYFQ  263


>N9BXF5 Ribosomal RNA small subunit methyltransferase J [Acinetobacter 
soli NIPH 2899]
Length=270

 Score = 411 bits (1057),  Expect = 2e-150
 Identities = 203/270 (75%), Positives = 227/270 (84%), Gaps = 0/270 (0%)

Query  1    MVKPMHLFAVVDALEQAQQFQQVLASRDVSTELVQIEQLNARFLRHHPELALCVDLDGLW  60
            MV PM L+AV +  +QA+  QQ+L +R V TEL++IEQLNARFLR HPELALCVD  GLW
Sbjct  1    MVNPMRLYAVAEVKDQAEAVQQLLQTRGVVTELIEIEQLNARFLRQHPELALCVDHAGLW  60

Query  61   LSANGMKMQPDWQAEIPRLKRASLKSEMIARACQINEQPSLIDATAGLGHDSLLMAYLGA  120
            LSANGMKMQPDW AEIPRLKRASLKSEMIARACQ+ EQP LIDATAGLGHD LLMA LGA
Sbjct  61   LSANGMKMQPDWMAEIPRLKRASLKSEMIARACQLGEQPHLIDATAGLGHDGLLMASLGA  120

Query  121  HVTLVERHPVLFTLLEDAKSKAENDPFLSKYMQRIHLIFQDAHYYLQQCNQDDRKVDVIY  180
             VTLVERHP+LFTLLE AK +AE D +L+  M R+HLIF DA  YL Q  +     DV+Y
Sbjct  121  EVTLVERHPILFTLLEFAKQQAEQDAYLAPVMARMHLIFSDATDYLTQRIEQQAITDVVY  180

Query  181  LDPMFPQRDQHHQVIKKQAQVKKQMQLLHLLLPEDGEMDLGDQLLPLAQQIASRVVVKRP  240
            LDPMFPQRDQH Q  KKQAQVKKQMQLLHLLLPEDG+MDLGDQLL LA+Q+A RVVVKRP
Sbjct  181  LDPMFPQRDQHQQAAKKQAQVKKQMQLLHLLLPEDGQMDLGDQLLALARQMAKRVVVKRP  240

Query  241  KHAVFLNEQQPDHQWQGDACRFDAYFQISM  270
            +HAVFLN++ PDHQWQGDACRFDAYFQ+S+
Sbjct  241  RHAVFLNDETPDHQWQGDACRFDAYFQLSL  270


>A0A427LLP8 Ribosomal RNA small subunit methyltransferase J [Acinetobacter 
soli]
Length=270

 Score = 411 bits (1057),  Expect = 2e-150
 Identities = 203/270 (75%), Positives = 227/270 (84%), Gaps = 0/270 (0%)

Query  1    MVKPMHLFAVVDALEQAQQFQQVLASRDVSTELVQIEQLNARFLRHHPELALCVDLDGLW  60
            MV PM L+AV +  +QA+  QQ+L +R V TEL++IEQLNARFLR HPELALCVD  GLW
Sbjct  1    MVNPMRLYAVAEVKDQAEAVQQLLQTRGVVTELIEIEQLNARFLRQHPELALCVDHAGLW  60

Query  61   LSANGMKMQPDWQAEIPRLKRASLKSEMIARACQINEQPSLIDATAGLGHDSLLMAYLGA  120
            LSANGMKMQPDW AEIPRLKRASLKSEMIARACQ+ EQP LIDATAGLGHD LLMA LGA
Sbjct  61   LSANGMKMQPDWMAEIPRLKRASLKSEMIARACQLGEQPHLIDATAGLGHDGLLMASLGA  120

Query  121  HVTLVERHPVLFTLLEDAKSKAENDPFLSKYMQRIHLIFQDAHYYLQQCNQDDRKVDVIY  180
             VTLVERHP+LFTLLE AK +AE D +L+  M R+HLIF DA  YL Q  +     DV+Y
Sbjct  121  EVTLVERHPILFTLLEFAKQQAEQDAYLAPVMARMHLIFSDAADYLTQRIEQQAITDVVY  180

Query  181  LDPMFPQRDQHHQVIKKQAQVKKQMQLLHLLLPEDGEMDLGDQLLPLAQQIASRVVVKRP  240
            LDPMFPQRDQH Q  KKQAQVKKQMQLLHLLLPEDG+MDLGDQLL LA+Q+A RVVVKRP
Sbjct  181  LDPMFPQRDQHQQAAKKQAQVKKQMQLLHLLLPEDGQMDLGDQLLALARQMAKRVVVKRP  240

Query  241  KHAVFLNEQQPDHQWQGDACRFDAYFQISM  270
            +HAVFLN++ PDHQWQGDACRFDAYFQ+S+
Sbjct  241  RHAVFLNDETPDHQWQGDACRFDAYFQLSL  270


>A0A242U723 Ribosomal RNA small subunit methyltransferase J [Acinetobacter 
pittii]
Length=263

 Score = 409 bits (1051),  Expect = 1e-149
 Identities = 198/263 (75%), Positives = 229/263 (87%), Gaps = 0/263 (0%)

Query  5    MHLFAVVDALEQAQQFQQVLASRDVSTELVQIEQLNARFLRHHPELALCVDLDGLWLSAN  64
            MH++  VD  EQAQ +Q VL SR V+ +L  IE+LNARFLR +PE+ALCVD +GLWLSAN
Sbjct  1    MHIYFEVDFQEQAQHYQAVLCSRGVTVDLQPIEKLNARFLRFNPEIALCVDENGLWLSAN  60

Query  65   GMKMQPDWQAEIPRLKRASLKSEMIARACQINEQPSLIDATAGLGHDSLLMAYLGAHVTL  124
            GMKMQPDW+AEIPRLKRASLKSEMIARACQ+ E+P L+DATAGLGHDSLLMAYLGA + L
Sbjct  61   GMKMQPDWKAEIPRLKRASLKSEMIARACQLGEKPILVDATAGLGHDSLLMAYLGAQIQL  120

Query  125  VERHPVLFTLLEDAKSKAENDPFLSKYMQRIHLIFQDAHYYLQQCNQDDRKVDVIYLDPM  184
            VERHP+LFTLLED+K++A++DPFLS++M RI LIF D+  YLQQ  Q  + VDV+YLDPM
Sbjct  121  VERHPILFTLLEDSKAQADHDPFLSQFMDRIQLIFADSASYLQQLQQTAQMVDVVYLDPM  180

Query  185  FPQRDQHHQVIKKQAQVKKQMQLLHLLLPEDGEMDLGDQLLPLAQQIASRVVVKRPKHAV  244
            FPQRDQ+HQ IKKQAQVKKQMQLLHLLLPEDGEMDLGD LL LAQ++A RVVVKRP+HA+
Sbjct  181  FPQRDQNHQAIKKQAQVKKQMQLLHLLLPEDGEMDLGDNLLVLAQKVAKRVVVKRPRHAI  240

Query  245  FLNEQQPDHQWQGDACRFDAYFQ  267
            FL  Q+P HQWQGDACRFDAYFQ
Sbjct  241  FLANQEPAHQWQGDACRFDAYFQ  263


>A0A1S8XF18 Ribosomal RNA small subunit methyltransferase J [Acinetobacter 
pittii]
Length=263

 Score = 408 bits (1049),  Expect = 3e-149
 Identities = 197/263 (75%), Positives = 229/263 (87%), Gaps = 0/263 (0%)

Query  5    MHLFAVVDALEQAQQFQQVLASRDVSTELVQIEQLNARFLRHHPELALCVDLDGLWLSAN  64
            MH++   D  EQAQ +Q VL SR V+ +L  IE+LNARFLR +PE+ALCVD +GLWLSAN
Sbjct  1    MHIYFEEDFQEQAQHYQAVLCSRGVTVDLQPIERLNARFLRFNPEIALCVDENGLWLSAN  60

Query  65   GMKMQPDWQAEIPRLKRASLKSEMIARACQINEQPSLIDATAGLGHDSLLMAYLGAHVTL  124
            GMKMQPDW+AEIPRLKRASLKSEMIARACQ+ E+P L+DATAGLGHDSLLMAYLGA + L
Sbjct  61   GMKMQPDWKAEIPRLKRASLKSEMIARACQLGEKPVLVDATAGLGHDSLLMAYLGAQIQL  120

Query  125  VERHPVLFTLLEDAKSKAENDPFLSKYMQRIHLIFQDAHYYLQQCNQDDRKVDVIYLDPM  184
            VERHP+LFTLLED+K++AE+DPFLS++M RI LIF D+  YLQ+ +Q+ + VDV+YLDPM
Sbjct  121  VERHPILFTLLEDSKAQAEHDPFLSQFMDRIQLIFADSASYLQELHQEAKTVDVVYLDPM  180

Query  185  FPQRDQHHQVIKKQAQVKKQMQLLHLLLPEDGEMDLGDQLLPLAQQIASRVVVKRPKHAV  244
            FPQRDQH Q IKKQAQVKKQMQLLHLLLPEDGEMDLGD LL LAQ++A RVVVKRP+HA+
Sbjct  181  FPQRDQHQQAIKKQAQVKKQMQLLHLLLPEDGEMDLGDNLLVLAQRVAKRVVVKRPRHAI  240

Query  245  FLNEQQPDHQWQGDACRFDAYFQ  267
            FL  Q+P HQWQGDACRFDAYFQ
Sbjct  241  FLANQEPAHQWQGDACRFDAYFQ  263


>A0A0M1I4R4 Ribosomal RNA small subunit methyltransferase J [Acinetobacter 
sp. C15]
Length=270

 Score = 408 bits (1049),  Expect = 3e-149
 Identities = 201/270 (74%), Positives = 226/270 (84%), Gaps = 0/270 (0%)

Query  1    MVKPMHLFAVVDALEQAQQFQQVLASRDVSTELVQIEQLNARFLRHHPELALCVDLDGLW  60
            MV PM L+ V +  +QA+  QQ+L +R V TEL++IEQLNARFLR HPELALCVD  GLW
Sbjct  1    MVNPMRLYTVAEVKDQAEAVQQLLQTRGVVTELIEIEQLNARFLRQHPELALCVDHAGLW  60

Query  61   LSANGMKMQPDWQAEIPRLKRASLKSEMIARACQINEQPSLIDATAGLGHDSLLMAYLGA  120
            LSANGMKMQPDW AEIPRLKRASLKSEMIARACQ+ EQP LIDATAGLGHD LLMA LGA
Sbjct  61   LSANGMKMQPDWMAEIPRLKRASLKSEMIARACQLGEQPHLIDATAGLGHDGLLMASLGA  120

Query  121  HVTLVERHPVLFTLLEDAKSKAENDPFLSKYMQRIHLIFQDAHYYLQQCNQDDRKVDVIY  180
             VTLVERHP+LFTLLE AK +AE D +L+  M R+HLIF DA  YL Q  +     DV+Y
Sbjct  121  EVTLVERHPILFTLLEFAKQQAEQDAYLAPVMARMHLIFSDAADYLTQRIEQQAITDVVY  180

Query  181  LDPMFPQRDQHHQVIKKQAQVKKQMQLLHLLLPEDGEMDLGDQLLPLAQQIASRVVVKRP  240
            LDPMFPQRDQH Q  KKQA+VKKQMQLLHLLLPEDG+MDLGDQLL LA+Q+A RVVVKRP
Sbjct  181  LDPMFPQRDQHQQAAKKQARVKKQMQLLHLLLPEDGQMDLGDQLLALARQMAKRVVVKRP  240

Query  241  KHAVFLNEQQPDHQWQGDACRFDAYFQISM  270
            +HAVFLN++ PDHQWQGDACRFDAYFQ+S+
Sbjct  241  RHAVFLNDETPDHQWQGDACRFDAYFQLSL  270


>A0A6H2VM22 Ribosomal RNA small subunit methyltransferase J [Acinetobacter 
pittii]
Length=263

 Score = 408 bits (1048),  Expect = 4e-149
 Identities = 197/263 (75%), Positives = 228/263 (87%), Gaps = 0/263 (0%)

Query  5    MHLFAVVDALEQAQQFQQVLASRDVSTELVQIEQLNARFLRHHPELALCVDLDGLWLSAN  64
            MH++   D  EQAQ +Q VL SR V+ +L  IE+LNARFLR +PE+ALCVD +GLWLSAN
Sbjct  1    MHIYFEQDFQEQAQHYQAVLCSRGVTVDLQPIEKLNARFLRFNPEIALCVDENGLWLSAN  60

Query  65   GMKMQPDWQAEIPRLKRASLKSEMIARACQINEQPSLIDATAGLGHDSLLMAYLGAHVTL  124
            GMKMQPDW+AEIPRLKRASLKSEMIARACQ+ E+P L+DATAGLGHDSLLMAYLGA + L
Sbjct  61   GMKMQPDWKAEIPRLKRASLKSEMIARACQLGEKPVLVDATAGLGHDSLLMAYLGAQIQL  120

Query  125  VERHPVLFTLLEDAKSKAENDPFLSKYMQRIHLIFQDAHYYLQQCNQDDRKVDVIYLDPM  184
            VERHP+LFTLLED+K++AE DPFLS++M RI LIF D+  YLQ+ +Q+ + VDV+YLDPM
Sbjct  121  VERHPILFTLLEDSKAQAERDPFLSQFMDRIQLIFADSASYLQELHQEAKTVDVVYLDPM  180

Query  185  FPQRDQHHQVIKKQAQVKKQMQLLHLLLPEDGEMDLGDQLLPLAQQIASRVVVKRPKHAV  244
            FPQRDQH Q IKKQAQVKKQMQLLHLLLPEDGEMDLGD LL LAQ++A RVVVKRP+HA+
Sbjct  181  FPQRDQHQQAIKKQAQVKKQMQLLHLLLPEDGEMDLGDNLLVLAQRVAKRVVVKRPRHAI  240

Query  245  FLNEQQPDHQWQGDACRFDAYFQ  267
            FL  Q+P HQWQGDACRFDAYFQ
Sbjct  241  FLANQEPAHQWQGDACRFDAYFQ  263


>R8YDK2 Ribosomal RNA small subunit methyltransferase J [Acinetobacter 
pittii ANC 4050]
Length=263

 Score = 407 bits (1047),  Expect = 5e-149
 Identities = 198/263 (75%), Positives = 229/263 (87%), Gaps = 0/263 (0%)

Query  5    MHLFAVVDALEQAQQFQQVLASRDVSTELVQIEQLNARFLRHHPELALCVDLDGLWLSAN  64
            MH++  +D  EQAQ +Q VL SR V+ +L  +E+LNARFLR +PELALCVD +GLWLSAN
Sbjct  1    MHIYFEIDFQEQAQHYQAVLYSRGVTVDLQLVEKLNARFLRLNPELALCVDENGLWLSAN  60

Query  65   GMKMQPDWQAEIPRLKRASLKSEMIARACQINEQPSLIDATAGLGHDSLLMAYLGAHVTL  124
            GMKMQPDW+AEIPRLKRASLKSEMIARACQ++E+P L+DATAGLGHDSLLMAYLGA + L
Sbjct  61   GMKMQPDWKAEIPRLKRASLKSEMIARACQLSEKPILVDATAGLGHDSLLMAYLGAQIQL  120

Query  125  VERHPVLFTLLEDAKSKAENDPFLSKYMQRIHLIFQDAHYYLQQCNQDDRKVDVIYLDPM  184
            VERHP+LFTLLEDAK++AE D FLS++M RI LIF D+  YLQQ  Q+ + VDV+YLDPM
Sbjct  121  VERHPILFTLLEDAKAQAEQDSFLSQFMDRIQLIFADSATYLQQLQQEAQTVDVVYLDPM  180

Query  185  FPQRDQHHQVIKKQAQVKKQMQLLHLLLPEDGEMDLGDQLLPLAQQIASRVVVKRPKHAV  244
            FPQRDQ+HQ IKKQAQVKKQMQLLHLLLPEDGEMDLGD LL LAQ++A RVVVKRP+HA+
Sbjct  181  FPQRDQNHQAIKKQAQVKKQMQLLHLLLPEDGEMDLGDNLLVLAQKVAKRVVVKRPRHAI  240

Query  245  FLNEQQPDHQWQGDACRFDAYFQ  267
            FL  Q+P HQWQGDACRFDAYFQ
Sbjct  241  FLANQEPAHQWQGDACRFDAYFQ  263



Lambda      K        H        a         alpha
   0.325    0.137    0.412    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 569710


  Database: f5a72b3127d2e45dbcaf114ad7c55823.TrEMBL.fasta
    Posted date:  May 12, 2024  6:45 AM
  Number of letters in database: 2,928
  Number of sequences in database:  11



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40