BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: ea184795b2b2619d9b8d51d048eb11d2.SwissProt.fasta
2 sequences; 698 total letters
Query= ACIAD0686
Length=153
Score E
Sequences producing significant alignments: (Bits) Value
P0DKC6 11-beta-hydroxysteroid dehydrogenase 1B [Arabidopsis thali... 34.7 8e-07
P0DKC5 11-beta-hydroxysteroid dehydrogenase 1A [Arabidopsis thali... 34.7 8e-07
>P0DKC6 11-beta-hydroxysteroid dehydrogenase 1B [Arabidopsis thaliana]
Length=349
Score = 34.7 bits (78), Expect = 8e-07
Identities = 20/76 (26%), Positives = 37/76 (49%), Gaps = 1/76 (1%)
Query 52 AMQHIAKGACHTLSLQHSNMTDHVHHLNPDC-IKSLNTQHAHASDCQDCNQFHCQTLSHY 110
A ++ +GAC L+ + N + V + + ++ T HA S DC + T++H+
Sbjct 64 AYEYACRGACLALTARRKNRLEEVAEIARELGSPNVVTVHADVSKPDDCRRIVDDTITHF 123
Query 111 ISSSSIVNDADRHEIS 126
+VN+A +IS
Sbjct 124 GRLDHLVNNAGMTQIS 139
Score = 14.2 bits (25), Expect = 4.5
Identities = 7/19 (37%), Positives = 10/19 (53%), Gaps = 0/19 (0%)
Query 113 SSSIVNDADRHEISHLDPS 131
+ SIVN R + +PS
Sbjct 268 AKSIVNGVCRKQRYVTEPS 286
>P0DKC5 11-beta-hydroxysteroid dehydrogenase 1A [Arabidopsis thaliana]
Length=349
Score = 34.7 bits (78), Expect = 8e-07
Identities = 20/76 (26%), Positives = 37/76 (49%), Gaps = 1/76 (1%)
Query 52 AMQHIAKGACHTLSLQHSNMTDHVHHLNPDC-IKSLNTQHAHASDCQDCNQFHCQTLSHY 110
A ++ +GAC L+ + N + V + + ++ T HA S DC + T++H+
Sbjct 64 AYEYACRGACLALTARRKNRLEEVAEIARELGSPNVVTVHADVSKPDDCRRIVDDTITHF 123
Query 111 ISSSSIVNDADRHEIS 126
+VN+A +IS
Sbjct 124 GRLDHLVNNAGMTQIS 139
Score = 14.2 bits (25), Expect = 4.5
Identities = 7/19 (37%), Positives = 10/19 (53%), Gaps = 0/19 (0%)
Query 113 SSSIVNDADRHEISHLDPS 131
+ SIVN R + +PS
Sbjct 268 AKSIVNGVCRKQRYVTEPS 286
Lambda K H a alpha
0.324 0.130 0.420 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 81144
Database: ea184795b2b2619d9b8d51d048eb11d2.SwissProt.fasta
Posted date: Jun 2, 2024 8:09 AM
Number of letters in database: 698
Number of sequences in database: 2
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40