BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 47589111ab80ca06898684d4de885e21.SwissProt.fasta
2 sequences; 906 total letters
Query= ACIAD0920
Length=152
Score E
Sequences producing significant alignments: (Bits) Value
Q2IL15 NADH-quinone oxidoreductase subunit H [Anaeromyxobacter de... 33.5 3e-06
Q8K903 Low-affinity inorganic phosphate transporter [Buchnera aph... 33.1 4e-06
>Q2IL15 NADH-quinone oxidoreductase subunit H [Anaeromyxobacter
dehalogenans (strain 2CP-C)]
Length=413
Score = 33.5 bits (75), Expect = 3e-06
Identities = 21/62 (34%), Positives = 35/62 (56%), Gaps = 8/62 (13%)
Query 4 MTALRRYYLWFFLICFILTLIGGVIAAVLPAG---MGGIVTAIPYLVAMIVVLFQFLKRE 60
M+ +Y + F +CF+ TL+ ++ A +PA +GG++ LVA IV F FL+
Sbjct 343 MSLCWKYLVPFAFVCFVATLLWQILVARVPATAPVVGGLM-----LVAAIVAGFSFLRLT 397
Query 61 QR 62
+R
Sbjct 398 RR 399
Score = 16.2 bits (30), Expect = 1.4
Identities = 6/23 (26%), Positives = 13/23 (57%), Gaps = 1/23 (4%)
Query 107 LLYLQQPQFITIALIMILLLAIP 129
LL+ P F+ + ++ +A+P
Sbjct 96 LLFRAAPYFVLVGFALV-FVALP 117
Score = 15.4 bits (28), Expect = 2.5
Identities = 8/32 (25%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query 118 IALIMILLLAIPLYLITYWFYGKQAQRMADKM 149
+ALI++ A+ + +T W+ + + RM ++
Sbjct 32 LALILVSFGAV-ISGMTVWWEMRVSARMQSRI 62
Score = 15.0 bits (27), Expect = 3.3
Identities = 8/26 (31%), Positives = 14/26 (54%), Gaps = 4/26 (15%)
Query 74 LGFTLIF----WGYNFLGVLLGLVIF 95
+GF L+F +G + + L + IF
Sbjct 107 VGFALVFVALPFGESLIAADLNVGIF 132
>Q8K903 Low-affinity inorganic phosphate transporter [Buchnera
aphidicola subsp. Schizaphis graminum (strain Sg)]
Length=493
Score = 33.1 bits (74), Expect = 4e-06
Identities = 22/64 (34%), Positives = 35/64 (55%), Gaps = 2/64 (3%)
Query 76 FTLIFWG-YNFLGVLLGLVIFARQDAEIFQNFLLYLQQPQFITIALIMILLLAIPLYLIT 134
F +I G +NFLGVLLG + A + N LL L +A++ +LLA L+ ++
Sbjct 52 FAVIMSGLFNFLGVLLGGLTVAYAIVHLLPNDLL-LNSNSKNALAMVFSMLLAAILWNLS 110
Query 135 YWFY 138
W++
Sbjct 111 TWYF 114
Score = 14.2 bits (25), Expect = 5.9
Identities = 4/9 (44%), Positives = 8/9 (89%), Gaps = 0/9 (0%)
Query 104 QNFLLYLQQ 112
++FLL+L +
Sbjct 332 RHFLLFLSE 340
Lambda K H a alpha
0.341 0.152 0.478 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 104304
Database: 47589111ab80ca06898684d4de885e21.SwissProt.fasta
Posted date: May 20, 2024 8:06 PM
Number of letters in database: 906
Number of sequences in database: 2
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40