ACIAD0920 / SwissProt Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 47589111ab80ca06898684d4de885e21.SwissProt.fasta
           2 sequences; 906 total letters



Query= ACIAD0920

Length=152
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q2IL15 NADH-quinone oxidoreductase subunit H [Anaeromyxobacter de...  33.5    3e-06
Q8K903 Low-affinity inorganic phosphate transporter [Buchnera aph...  33.1    4e-06


>Q2IL15 NADH-quinone oxidoreductase subunit H [Anaeromyxobacter 
dehalogenans (strain 2CP-C)]
Length=413

 Score = 33.5 bits (75),  Expect = 3e-06
 Identities = 21/62 (34%), Positives = 35/62 (56%), Gaps = 8/62 (13%)

Query  4    MTALRRYYLWFFLICFILTLIGGVIAAVLPAG---MGGIVTAIPYLVAMIVVLFQFLKRE  60
            M+   +Y + F  +CF+ TL+  ++ A +PA    +GG++     LVA IV  F FL+  
Sbjct  343  MSLCWKYLVPFAFVCFVATLLWQILVARVPATAPVVGGLM-----LVAAIVAGFSFLRLT  397

Query  61   QR  62
            +R
Sbjct  398  RR  399


 Score = 16.2 bits (30),  Expect = 1.4
 Identities = 6/23 (26%), Positives = 13/23 (57%), Gaps = 1/23 (4%)

Query  107  LLYLQQPQFITIALIMILLLAIP  129
            LL+   P F+ +   ++  +A+P
Sbjct  96   LLFRAAPYFVLVGFALV-FVALP  117


 Score = 15.4 bits (28),  Expect = 2.5
 Identities = 8/32 (25%), Positives = 19/32 (59%), Gaps = 1/32 (3%)

Query  118  IALIMILLLAIPLYLITYWFYGKQAQRMADKM  149
            +ALI++   A+ +  +T W+  + + RM  ++
Sbjct  32   LALILVSFGAV-ISGMTVWWEMRVSARMQSRI  62


 Score = 15.0 bits (27),  Expect = 3.3
 Identities = 8/26 (31%), Positives = 14/26 (54%), Gaps = 4/26 (15%)

Query  74   LGFTLIF----WGYNFLGVLLGLVIF  95
            +GF L+F    +G + +   L + IF
Sbjct  107  VGFALVFVALPFGESLIAADLNVGIF  132


>Q8K903 Low-affinity inorganic phosphate transporter [Buchnera 
aphidicola subsp. Schizaphis graminum (strain Sg)]
Length=493

 Score = 33.1 bits (74),  Expect = 4e-06
 Identities = 22/64 (34%), Positives = 35/64 (55%), Gaps = 2/64 (3%)

Query  76   FTLIFWG-YNFLGVLLGLVIFARQDAEIFQNFLLYLQQPQFITIALIMILLLAIPLYLIT  134
            F +I  G +NFLGVLLG +  A     +  N LL L       +A++  +LLA  L+ ++
Sbjct  52   FAVIMSGLFNFLGVLLGGLTVAYAIVHLLPNDLL-LNSNSKNALAMVFSMLLAAILWNLS  110

Query  135  YWFY  138
             W++
Sbjct  111  TWYF  114


 Score = 14.2 bits (25),  Expect = 5.9
 Identities = 4/9 (44%), Positives = 8/9 (89%), Gaps = 0/9 (0%)

Query  104  QNFLLYLQQ  112
            ++FLL+L +
Sbjct  332  RHFLLFLSE  340



Lambda      K        H        a         alpha
   0.341    0.152    0.478    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 104304


  Database: 47589111ab80ca06898684d4de885e21.SwissProt.fasta
    Posted date:  May 20, 2024  8:06 PM
  Number of letters in database: 906
  Number of sequences in database:  2



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40