BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 907431a0811b0fbb7037c7b42ec3d42d.SwissProt.fasta
2 sequences; 9,620 total letters
Query= ACIAD0943
Length=514
Score E
Sequences producing significant alignments: (Bits) Value
A2AAJ9 Obscurin [Mus musculus] 39.3 5e-06
Q869R9 Myb-like protein J [Dictyostelium discoideum] 38.9 6e-06
>A2AAJ9 Obscurin [Mus musculus]
Length=8886
Score = 39.3 bits (90), Expect = 5e-06
Identities = 83/349 (24%), Positives = 134/349 (38%), Gaps = 69/349 (20%)
Query 133 ADQPETLKLLQEAYTLEKELNQYKQQLISQGLDEEDANAE-IRQRLLERRNQPNLNQTTT 191
A Q L LL EA ++ +++ L EED+ + +RQ E + +T
Sbjct 5679 AAQEGDLHLLWEALARKRRMSREPTLDSISELPEEDSRVQHLRQEAEETAPDLSEGYSTA 5738
Query 192 TQSTVTTQAEISSSTSDDISRINVGTLETQEVQASIFALPNAKTDMAKLGGEDISVVNDS 251
+ T +A++S ++SDD SR GT P+ T + K GG IS +
Sbjct 5739 DELARTGEADLSHTSSDDESR--AGT-------------PSLVTYLKKAGGPGISPLASK 5783
Query 252 NLAIDVLTRIGQLKQNFDAV-----------VDSTGVDKEKASLVVNMLLGG--VAGTVK 298
+ A V T + KQ V D +KA++ + G V +K
Sbjct 5784 HEA-QVTTSVKPQKQQEPVVPTCPPPGDLSAADLMDPSLDKAAVKIQAAFKGYKVRKEMK 5842
Query 299 TL---VEDKLIGNQVAAIQDRL----------------TKEGVALVHGTDYDTVQQASQR 339
V + G+ A + D L K+G+ L G Y
Sbjct 5843 QQEGPVFSRTFGDTEAQVGDVLRLECVLATKTDMRACWLKDGIELTDGRHYHI------- 5895
Query 340 DQLGNDTAKQLSDQLELTGEG-----INLSSGIIGGTINLGSKGTTTKTIDGKEVEVSTN 394
DQL + T L L T G ++ SG + + + GT + E E S+
Sbjct 5896 DQLKDGTCSLLVTGLAPTDSGRYTCQVSTKSGRVSHSACVVVSGTES------EAESSSG 5949
Query 395 GEVLGGAHKDTSKPVNDGFDSHHCPAKNCYKDAPISSSDGPAIKMEPAD 443
GE L A + ++ ++ F + PA+ ++ +S+ +GP EPAD
Sbjct 5950 GE-LDDAFRRAARRLHRLFRT-KSPAELSEEELFLSADEGPGEPEEPAD 5996
Score = 25.8 bits (55), Expect = 0.071
Identities = 26/98 (27%), Positives = 42/98 (43%), Gaps = 11/98 (11%)
Query 14 SAELTNRDINNTQEITRDQTTGMLNGSV--TVDHRLLSESGRAEIVKEQKELPENGVQIA 71
S LT+ + +++T T ++ SV T D + L S R ++ E G Q
Sbjct 3531 SRPLTDVTVTEGEDLTLVCETTTVDSSVRWTKDGKTLRPSARCQLSHE-------GCQAQ 3583
Query 72 KNIVSQLPE--GQYKTDALNTLSHLQVKAAVTPVGFKE 107
I + P+ G+YK + S V+ PV F+E
Sbjct 3584 LLITATTPQDGGRYKCEIGGASSSSIVRVHALPVRFRE 3621
Score = 24.3 bits (51), Expect = 0.21
Identities = 14/60 (23%), Positives = 34/60 (57%), Gaps = 1/60 (2%)
Query 442 ADHRETASYGNSDAAKKYREKQQELLNQGRLQEAVDMDIHDIRSKFGDKYDQHILEMQKY 501
AD ET+SY ++ RE++ ++G+L + ++ ++ D++ G + + L+++ Y
Sbjct 6178 ADATETSSYFSAQGYLSSREQEGTESDEGQLPQVLE-ELKDLQVAPGTRLAKFQLKVKGY 6236
Score = 20.8 bits (42), Expect = 2.4
Identities = 33/147 (22%), Positives = 56/147 (38%), Gaps = 9/147 (6%)
Query 24 NTQEITRDQTTGM--LNGSVTVDHRLLSESGRAEIVKEQKELPENGVQIAKNIVSQLPEG 81
N Q+I+ ++ + L G T D + E ++ E VQ +VS +
Sbjct 6692 NVQDISHFHSSFLKELQGCGTDDDVAMCFIKNQEAFEKYLEFLVGRVQAESVVVSTPVQE 6751
Query 82 QYKTDALNTLSHLQVKAAVTP--VGFKEVGDELLNQYVKFIEQCNDPKIFRAMADQPETL 139
YK A TLS P + E E + +Y +++ + R A +
Sbjct 6752 FYKKYAEETLSAKDPTQPPPPPLQHYLEQPVERVQKYQALLKE-----LIRNKARNRQNC 6806
Query 140 KLLQEAYTLEKELNQYKQQLISQGLDE 166
LL++AY + L Q + + L E
Sbjct 6807 ALLEQAYAVVSALPQRAENKLHVSLME 6833
Score = 20.0 bits (40), Expect = 4.2
Identities = 15/56 (27%), Positives = 22/56 (39%), Gaps = 1/56 (2%)
Query 403 KDTSKPVNDGFDS-HHCPAKNCYKDAPISSSDGPAIKMEPADHRETASYGNSDAAK 457
+ TS V +G D+ C + A S DG + A H +G S A +
Sbjct 114 RPTSIRVREGADATFRCRVGGSPQPAVSWSKDGRRLGPPDAPHVRVEEHGESSALR 169
Score = 20.0 bits (40), Expect = 4.2
Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 9/56 (16%)
Query 284 LVVNMLLGGVAGTVKTLVEDKL-IGNQVAAIQDRLTKEGVALVHGTDYDTVQQASQ 338
L++ ++ G + L E+ + + + A ++ LT TDYDT A++
Sbjct 6135 LIITAVVPADMGVYRCLAENSMGVSSTKAELRVELTS--------TDYDTAADATE 6182
Score = 18.9 bits (37), Expect = 9.5
Identities = 10/23 (43%), Positives = 15/23 (65%), Gaps = 2/23 (9%)
Query 226 SIFALPNAKTDMAKLGGEDISVV 248
SIF+ P TD+ GED+++V
Sbjct 3528 SIFSRP--LTDVTVTEGEDLTLV 3548
>Q869R9 Myb-like protein J [Dictyostelium discoideum]
Length=734
Score = 38.9 bits (89), Expect = 6e-06
Identities = 26/110 (24%), Positives = 47/110 (43%), Gaps = 5/110 (5%)
Query 129 FRAMADQPETLKLLQEAYTLEKELNQYKQQLISQGLDEEDANAEIRQRLLERRNQPNLNQ 188
F Q E L Q +Y +++ +Q +++ + E+ E Q+ ++ QPN +
Sbjct 106 FNQTQQQKEALLSFQNSYLQQQQKDQQQKEQQKEQQKEQQQQEEQEQQ--QKEQQPNESN 163
Query 189 TTTTQSTVTTQAEISSSTSDDISRINVGTLETQEVQASIFALPNAKTDMA 238
TTTT +T TT E + D N+ + + + + N D A
Sbjct 164 TTTTTTTTTTAVEQQGAEQQD---TNLNSTSSPTMMTDVVFNTNDHVDFA 210
Score = 24.3 bits (51), Expect = 0.19
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 0/34 (0%)
Query 165 DEEDANAEIRQRLLERRNQPNLNQTTTTQSTVTT 198
+ ++N+ N N N TTTT +T TT
Sbjct 327 NNNNSNSNNNNNNNNNNNNNNTNNTTTTTTTATT 360
Lambda K H a alpha
0.311 0.129 0.348 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 4354664
Database: 907431a0811b0fbb7037c7b42ec3d42d.SwissProt.fasta
Posted date: May 20, 2024 6:05 AM
Number of letters in database: 9,620
Number of sequences in database: 2
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
