BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 2ab6af9c6bfde5919778e41ed5021aa3.SwissProt.fasta
1 sequences; 180 total letters
Query= ACIAD0993
Length=175
Score E
Sequences producing significant alignments: (Bits) Value
Q5LSJ4 3-hydroxyanthranilate 3,4-dioxygenase [Ruegeria pomeroyi (... 34.3 3e-07
>Q5LSJ4 3-hydroxyanthranilate 3,4-dioxygenase [Ruegeria pomeroyi
(strain ATCC 700808 / DSM 15171 / DSS-3)]
Length=180
Score = 34.3 bits (77), Expect = 3e-07
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 2/44 (5%)
Query 93 HHD--VEEVFFMLRGEIDLFIEHNGEKFSTRLKERDLISIPPGI 134
+HD VEE F+ L+G++ L + GE + ++E D+ +PP +
Sbjct 49 YHDDPVEEFFYQLKGDMVLKLYEGGEFYDVPIREGDIFLLPPHV 92
Score = 14.6 bits (26), Expect = 0.96
Identities = 8/24 (33%), Positives = 10/24 (42%), Gaps = 3/24 (13%)
Query 89 PLHIHHDVEEVFFMLRGEIDLFIE 112
P H+ H + G I L IE
Sbjct 89 PPHVRHSPQR---PQEGSIGLVIE 109
Lambda K H a alpha
0.323 0.140 0.440 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 25116
Database: 2ab6af9c6bfde5919778e41ed5021aa3.SwissProt.fasta
Posted date: Jun 3, 2024 11:16 AM
Number of letters in database: 180
Number of sequences in database: 1
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40