BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 8ce3fe0e7f19671c878654535ff15d41.SwissProt.fasta
6 sequences; 1,264 total letters
Query= ACIAD1092
Length=193
Score E
Sequences producing significant alignments: (Bits) Value
P58652 Adenosylcobalamin/alpha-ribazole phosphatase [Salmonella t... 55.1 1e-13
P39701 Adenosylcobalamin/alpha-ribazole phosphatase [Salmonella t... 53.9 4e-13
P52086 Adenosylcobalamin/alpha-ribazole phosphatase [Escherichia ... 51.2 4e-12
D3DFG8 Phosphoserine phosphatase 1 [Hydrogenobacter thermophilus ... 43.9 1e-09
Q15SN0 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase ... 36.2 6e-07
Q7NJF7 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase ... 33.5 5e-06
>P58652 Adenosylcobalamin/alpha-ribazole phosphatase [Salmonella
typhi]
Length=202
Score = 55.1 bits (131), Expect = 1e-13
Identities = 51/159 (32%), Positives = 73/159 (46%), Gaps = 11/159 (7%)
Query 2 IYLIRHAQSMANVNARCTSHASIALTEHGILQAEQLTQQLPLA--DRVFISPFLRTFQTA 59
++L+RH ++ ANV + HA LTE GI QA+ L L A DRV S R TA
Sbjct 3 LWLVRHGETEANVAGLYSGHAPTPLTEKGIGQAKTLHTLLRHAPFDRVLCSELERARHTA 62
Query 60 RPLLL-RDHLQPEVVEIQEFSYLSDAKCHNTTIEERKPFVDRYWAQANPDYKDA--EDAE 116
R +L RD Q + E+ E ++ H+ + W D+++A + E
Sbjct 63 RLVLEGRDTPQHILPELNEMYFVDWEMRHHRDLTHEDAESYAAWC---TDWQNAVPTNGE 119
Query 117 SFREFYHRVVDFAQILNGLKDHYLTQNLMVFSHGQFLTL 155
F+ F RV F L D QNL++ SH L+L
Sbjct 120 GFQAFTRRVERFISRLGAFSD---CQNLLIVSHQGVLSL 155
>P39701 Adenosylcobalamin/alpha-ribazole phosphatase [Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)]
Length=202
Score = 53.9 bits (128), Expect = 4e-13
Identities = 53/165 (32%), Positives = 76/165 (46%), Gaps = 23/165 (14%)
Query 2 IYLIRHAQSMANVNARCTSHASIALTEHGILQAEQLTQQLPLA--DRVFISPFLRTFQTA 59
++L+RH ++ ANV + HA LTE GI QA+ L L A DRV S R TA
Sbjct 3 LWLVRHGETEANVAGLYSGHAPTPLTEKGIGQAKTLHTLLRHAPFDRVLCSELERARHTA 62
Query 60 RPLL----LRDHLQPEVVEIQEFSYLSDAKC---HNTTIEERKPFVD--RYWAQANPDYK 110
R +L + H+ PE+ E+ Y D + + T E+ + + W A P
Sbjct 63 RLVLEGRDVPQHILPELNEM----YFGDWEMRHHRDLTHEDAESYAAWCTDWQNAVP--- 115
Query 111 DAEDAESFREFYHRVVDFAQILNGLKDHYLTQNLMVFSHGQFLTL 155
+ E F+ F RV F L+ D QNL++ SH L+L
Sbjct 116 --TNGEGFQAFTRRVERFISRLDAFSD---CQNLLIVSHQGVLSL 155
>P52086 Adenosylcobalamin/alpha-ribazole phosphatase [Escherichia
coli (strain K12)]
Length=203
Score = 51.2 bits (121), Expect = 4e-12
Identities = 56/191 (29%), Positives = 88/191 (46%), Gaps = 24/191 (13%)
Query 2 IYLIRHAQSMANVNARCTSHASIALTEHGILQAEQLTQQLPLA--DRVFISPFLRTFQTA 59
++LIRH ++ AN++ + HA LT GI QA+ L L D V S R TA
Sbjct 3 LWLIRHGETQANIDGLYSGHAPTPLTARGIEQAQNLHTLLHGVSFDLVLCSELERAQHTA 62
Query 60 RPLLLRDHLQPEVV-EIQEFSYLSDAKCHNTTIEERKPFVDRYWAQANPDYKDA--EDAE 116
R +L L +++ E+ E + H+ + + + Y A N D++ A + E
Sbjct 63 RLVLSDRQLPVQIIPELNEMFFGDWEMRHHRDLMQED--AENYSAWCN-DWQHAIPTNGE 119
Query 117 SFREFYHRVVDFAQILNGLKDHYLTQNLMVFSHGQFLTLF--KLIAFEHQAL-------- 166
F+ F RV F L+ + HY QN++V SH L+L +LI +A+
Sbjct 120 GFQAFSQRVERFIARLSEFQ-HY--QNILVVSHQGVLSLLIARLIGMPAEAMWHFRVDQG 176
Query 167 ---SIDLMHKF 174
+ID+ KF
Sbjct 177 CWSAIDINQKF 187
>D3DFG8 Phosphoserine phosphatase 1 [Hydrogenobacter thermophilus
(strain DSM 6534 / IAM 12695 / TK-6)]
Length=211
Score = 43.9 bits (102), Expect = 1e-09
Identities = 42/153 (27%), Positives = 67/153 (44%), Gaps = 11/153 (7%)
Query 2 IYLIRHAQSMANVNARCTSHASIALTEHGILQAEQLTQQLPL--ADRVFISPFLRTFQTA 59
+ L+RHA+S N R L+E G QA+ L Q+L D ++ SP RT+ TA
Sbjct 4 LILVRHAESEWNPVGRYQGLLDPDLSERGKKQAKLLAQELSREHLDVIYSSPLKRTYLTA 63
Query 60 RPLLLRDHLQPEVVEIQEFSYLSDAKCHNTTIE---ERKPFVDRYWAQANPDYKDAEDAE 116
+ +L EV++ + +E E+ P R W + P + + E
Sbjct 64 LEIAEAKNL--EVIKEDRIIEIDHGMWSGMLVEEVMEKYPEDFRRWVE-EPHKVEFQGGE 120
Query 117 SFREFYHRVVDFAQILNGLKDHYLTQNLMVFSH 149
S Y+RV F L ++ + Q ++V SH
Sbjct 121 SLASVYNRVKGF---LEEVRKRHWNQTVVVVSH 150
>Q15SN0 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
[Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087)]
Length=227
Score = 36.2 bits (82), Expect = 6e-07
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 2/79 (3%)
Query 1 VIYLIRHAQSMANVNARCTSHASIALTEHGILQAEQLTQQLPLA--DRVFISPFLRTFQT 58
++ LIRH QS+ N R T ++L++ G+ +A++ Q L D F S LR T
Sbjct 3 LLTLIRHGQSIWNQQNRFTGWVDVSLSQSGVKEAQRAAQMLSQQRFDLAFTSELLRAQDT 62
Query 59 ARPLLLRDHLQPEVVEIQE 77
+L + + V I +
Sbjct 63 LYEILRHNRQCHQYVRIHD 81
>Q7NJF7 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
2 [Gloeobacter violaceus (strain ATCC 29082 / PCC 7421)]
Length=219
Score = 33.5 bits (75), Expect = 5e-06
Identities = 26/80 (33%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query 1 VIYLIRHAQSMANVNARCTSHASIALTEHGILQAE---QLTQQLPLADRVFISPFLRTFQ 57
++ ++RH QS+ N+ R T + LTE G +A +L +P A F S R
Sbjct 3 LLVMVRHGQSIWNLENRFTGWTDVPLTEKGRAEARACGELIYCVPFA-VAFTSKLTRAQD 61
Query 58 TARPLLLRDHLQPEVVEIQE 77
T R L+L QP+V I++
Sbjct 62 TLR-LILEAADQPDVPVIED 80
Score = 24.6 bits (52), Expect = 0.004
Identities = 15/46 (33%), Positives = 21/46 (46%), Gaps = 2/46 (4%)
Query 35 EQLTQQLPLADRVFISPFLRTFQTARPLLLRDHLQPEVVEIQEFSY 80
E++ +L V +S T + L+ DHL PE VE E Y
Sbjct 138 EKIVPELEAGKNVLVSAHGNTIRAI--LMELDHLSPEQVEKVEIEY 181
Lambda K H a alpha
0.329 0.139 0.420 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 172592
Database: 8ce3fe0e7f19671c878654535ff15d41.SwissProt.fasta
Posted date: May 20, 2024 6:38 PM
Number of letters in database: 1,264
Number of sequences in database: 6
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
