BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 35f77bfde98fe49acbdc3793288d6de8.SwissProt.fasta
15 sequences; 6,526 total letters
Query= ACIAD1138
Length=1074
Score E
Sequences producing significant alignments: (Bits) Value
P0AEZ8 Membrane-bound lytic murein transglycosylase D [Escherichi... 218 4e-65
P0AEZ7 Membrane-bound lytic murein transglycosylase D [Escherichi... 218 4e-65
O07532 Peptidoglycan endopeptidase LytF [Bacillus subtilis (strai... 147 2e-40
P37710 Autolysin [Enterococcus faecalis (strain ATCC 700802 / V583)] 140 3e-37
P32820 Putative tributyltin chloride resistance protein [Alteromo... 115 2e-32
P39046 Muramidase-2 [Enterococcus hirae (strain ATCC 9790 / DSM 2... 116 9e-30
Q49UX4 N-acetylmuramoyl-L-alanine amidase sle1 [Staphylococcus sa... 106 5e-28
A0A0H3C9Q9 Cell division protein DipM [Caulobacter vibrioides (st... 103 7e-26
P54421 Probable peptidoglycan endopeptidase LytE [Bacillus subtil... 100 7e-26
Q8CMN2 N-acetylmuramoyl-L-alanine amidase sle1 [Staphylococcus ep... 98.2 3e-25
Q5HRU2 N-acetylmuramoyl-L-alanine amidase sle1 [Staphylococcus ep... 98.2 3e-25
O31852 D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase Cw... 99.0 5e-25
P0C1U7 N-acetylmuramoyl-L-alanine amidase sle1 [Staphylococcus au... 89.7 2e-22
Q2G0U9 N-acetylmuramoyl-L-alanine amidase sle1 [Staphylococcus au... 89.7 2e-22
Q01837 Probable endopeptidase p60 [Listeria ivanovii] 78.6 4e-18
>P0AEZ8 Membrane-bound lytic murein transglycosylase D [Escherichia
coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)]
Length=452
Score = 218 bits (554), Expect = 4e-65
Identities = 142/413 (34%), Positives = 205/413 (50%), Gaps = 32/413 (8%)
Query 26 IAALGLTGCSSTPQTT-HTKTTKNVGSGFLDASSLDSLEDLLSATDMRAVEGDRLLILKH 84
+A++ L GC ST H ++ G G + T D I
Sbjct 8 LASVLLVGCQSTGNVQQHAQSLSAAGQG-----------EAAKFTSQARWMDDGTSIAPD 56
Query 85 GDVWKRMTVGFKMDETHWDPRIEAQRSWFISRQPYLDRLSARASRYLYHTVKEAERRGLP 144
GD+W + KM D RI Q+ ++ + YL ++ RA Y+Y + ++R +P
Sbjct 57 GDLWAFIGDELKMGIPEND-RIREQKQKYLRNKSYLHDVTLRAEPYMYWIAGQVKKRNMP 115
Query 145 TELALLPVIESSYDPAATSSAAAAGLWQFIPSTGRIYGLRQTSLYDGRRDVVESTRAAYE 204
EL LLP++ES++DP ATS A AAG+WQ IPSTGR YGL+QT YD RRDVV ST AA
Sbjct 116 MELVLLPIVESAFDPHATSGANAAGIWQIIPSTGRNYGLKQTRNYDARRDVVASTTAALN 175
Query 205 FLGSLYNQF-GSWELALAAYNAGPGRIQQAINRNQAAGLPTDYWSLKLPGETMNYVPRFL 263
+ L F G W L +AAYN+G GR+ +AI N+A G TD+WSL LP ET YVP+ L
Sbjct 176 MMQRLNKMFDGDWLLTVAAYNSGEGRVMKAIKTNKARGKSTDFWSLPLPQETKQYVPKML 235
Query 264 AVAQIIKNPKAYGVSLPPIANRPHFREVTLNSAVDLNQISSVTGLSRTELYALNPGYRGD 323
A++ I+KN K YGV LP V L+S V++ +++ + G+S ++L N G +G
Sbjct 236 ALSDILKNSKRYGVRLPTTDESRALARVHLSSPVEMAKVADMAGISVSKLKTFNAGVKGS 295
Query 324 VIDPASPMRILIPADLSPSIDNKLKALKPSGNSGLWASSSAPVQPTPTVSISTTPRNSNS 383
+ + P +++P + + L + A VQ T+ TP NS
Sbjct 296 TLGASGPQYVMVPKKHADQL-----------RESLASGEIAAVQ--STLVADNTPLNSR- 341
Query 384 GQPLATTKTSPPVMTASASRPTVSSTVSSISSSIRKSATPKGADALAQFAASA 436
T S +++ ASR VS+ + +R S G +SA
Sbjct 342 ----VYTVRSGDTLSSIASRLGVSTKDLQQWNKLRGSKLKPGQSLTIGAGSSA 390
Score = 60.1 bits (144), Expect = 2e-12
Identities = 42/115 (37%), Positives = 63/115 (55%), Gaps = 15/115 (13%)
Query 908 VYTVKSGDTLGNIANRYSLQVDDLMQINGLRHSTLQAGQKIKL-TGDIEKVAASKTDSKS 966
VYTV+SGDTL +IA+R + DL Q N LR S L+ GQ + + G + A+ +DS +
Sbjct 342 VYTVRSGDTLSSIASRLGVSTKDLQQWNKLRGSKLKPGQSLTIGAGSSAQRLANNSDSIT 401
Query 967 KTVSKSSGKTEDYTVKAGESLHSISSRLGLSSKELADLNDLSARASLQRGQTIQI 1021
Y V+ G+SL SI+ R G++ K++ N S A+LQ G + +
Sbjct 402 ------------YRVRKGDSLSSIAKRHGVNIKDVMRWN--SDTANLQPGDKLTL 442
Score = 55.5 bits (132), Expect = 6e-11
Identities = 40/115 (35%), Positives = 62/115 (54%), Gaps = 5/115 (4%)
Query 589 YTVVSGDTLAIIAMKNGVSWRDIANWNQIDPNRTLYAGTSLYLYDAKPQIDSPAKSDTTP 648
YTV SGDTL+ IA + GVS +D+ WN++ ++ L G SL + SD+
Sbjct 343 YTVRSGDTLSSIASRLGVSTKDLQQWNKLRGSK-LKPGQSLTIGAGSSAQRLANNSDSI- 400
Query 649 DSYTVKANDSLTGVAEQFGLTVKQLADLNDLNVTSGLFVGQKLTLKDKKTSSTTS 703
+Y V+ DSL+ +A++ G+ +K + N + T+ L G KLTL K + S
Sbjct 401 -TYRVRKGDSLSSIAKRHGVNIKDVMRWN--SDTANLQPGDKLTLFVKNNNMPDS 452
Score = 53.5 bits (127), Expect = 2e-10
Identities = 36/107 (34%), Positives = 57/107 (53%), Gaps = 7/107 (7%)
Query 844 YVVQSGDSLNAVASKFNLQLDVLADLNGLNRNAGLRVGQKLKLTGEPSAHSTAKSKAKDN 903
Y V+SGD+L+++AS+ + L N L R + L+ GQ L + SA A +N
Sbjct 343 YTVRSGDTLSSIASRLGVSTKDLQQWNKL-RGSKLKPGQSLTIGAGSSAQRLA-----NN 396
Query 904 EIPDVYTVKSGDTLGNIANRYSLQVDDLMQINGLRHSTLQAGQKIKL 950
Y V+ GD+L +IA R+ + + D+M+ N + LQ G K+ L
Sbjct 397 SDSITYRVRKGDSLSSIAKRHGVNIKDVMRWNS-DTANLQPGDKLTL 442
Score = 51.2 bits (121), Expect = 1e-09
Identities = 53/197 (27%), Positives = 89/197 (45%), Gaps = 34/197 (17%)
Query 729 LKQIAERYGLSNQELADLTTGLNAGSNLYIG--QKINVPLHEVGEDDSKLNAKSAKAVPS 786
+ ++A+ G+S +L G+ GS L Q + VP + L + AV S
Sbjct 271 MAKVADMAGISVSKLKTFNAGVK-GSTLGASGPQYVMVPKKHADQLRESLASGEIAAVQS 329
Query 787 --------VKTENYKVQRGETLSSIATASKISLSELLELNNLKSATGLRAGQTIKIPAGS 838
+ + Y V+ G+TLSSIA+ +S +L + N L+ + L+ GQ++ I AGS
Sbjct 330 TLVADNTPLNSRVYTVRSGDTLSSIASRLGVSTKDLQQWNKLRGSK-LKPGQSLTIGAGS 388
Query 839 TIPD--------EYVVQSGDSLNAVASKFNLQLDVLADLNGLNRNAGLRVGQKLKLTGEP 890
+ Y V+ GDSL+++A + + + + N + A L+ G KL L
Sbjct 389 SAQRLANNSDSITYRVRKGDSLSSIAKRHGVNIKDVMRWN--SDTANLQPGDKLTLF--- 443
Query 891 SAHSTAKSKAKDNEIPD 907
K+N +PD
Sbjct 444 ---------VKNNNMPD 451
Score = 50.8 bits (120), Expect = 2e-09
Identities = 31/102 (30%), Positives = 61/102 (60%), Gaps = 18/102 (18%)
Query 979 YTVKAGESLHSISSRLGLSSKELADLNDLSARASLQRGQTIQI------------PKTVT 1026
YTV++G++L SI+SRLG+S+K+L N L + L+ GQ++ I ++T
Sbjct 343 YTVRSGDTLSSIASRLGVSTKDLQQWNKLRG-SKLKPGQSLTIGAGSSAQRLANNSDSIT 401
Query 1027 EYKIKRGDTLNGLASKYGMALAEL----ADLNGLKPSTSLRI 1064
Y++++GD+L+ +A ++G+ + ++ +D L+P L +
Sbjct 402 -YRVRKGDSLSSIAKRHGVNIKDVMRWNSDTANLQPGDKLTL 442
Score = 44.7 bits (104), Expect = 1e-07
Identities = 44/168 (26%), Positives = 77/168 (46%), Gaps = 22/168 (13%)
Query 662 VAEQFGLTVKQLADLN------DLNVTSGLFVGQKLTLKDKKTSSTTSARHTAESKT--A 713
VA+ G++V +L N L + +V D+ S S A T A
Sbjct 274 VADMAGISVSKLKTFNAGVKGSTLGASGPQYVMVPKKHADQLRESLASGEIAAVQSTLVA 333
Query 714 KQVP--TKLYTVRRGEYLKQIAERYGLSNQELADLTTGLNAGSNLYIGQKINVPLHEVGE 771
P +++YTVR G+ L IA R G+S ++L GS L GQ + + G
Sbjct 334 DNTPLNSRVYTVRSGDTLSSIASRLGVSTKDLQQWNK--LRGSKLKPGQSLTI---GAGS 388
Query 772 DDSKLNAKSAKAVPSVKTENYKVQRGETLSSIATASKISLSELLELNN 819
+L A ++ ++ Y+V++G++LSSIA +++ +++ N+
Sbjct 389 SAQRL-ANNSDSI------TYRVRKGDSLSSIAKRHGVNIKDVMRWNS 429
Score = 35.4 bits (80), Expect = 1e-04
Identities = 22/63 (35%), Positives = 32/63 (51%), Gaps = 11/63 (17%)
Query 588 TYTVVSGDTLAIIAMKNGVSWRDIANWNQIDPNRTLYAGTSLYLYDAKPQIDSPAKSDTT 647
TY V GD+L+ IA ++GV+ +D+ WN N L G L L+ K++
Sbjct 401 TYRVRKGDSLSSIAKRHGVNIKDVMRWNSDTAN--LQPGDKLTLF---------VKNNNM 449
Query 648 PDS 650
PDS
Sbjct 450 PDS 452
>P0AEZ7 Membrane-bound lytic murein transglycosylase D [Escherichia
coli (strain K12)]
Length=452
Score = 218 bits (554), Expect = 4e-65
Identities = 142/413 (34%), Positives = 205/413 (50%), Gaps = 32/413 (8%)
Query 26 IAALGLTGCSSTPQTT-HTKTTKNVGSGFLDASSLDSLEDLLSATDMRAVEGDRLLILKH 84
+A++ L GC ST H ++ G G + T D I
Sbjct 8 LASVLLVGCQSTGNVQQHAQSLSAAGQG-----------EAAKFTSQARWMDDGTSIAPD 56
Query 85 GDVWKRMTVGFKMDETHWDPRIEAQRSWFISRQPYLDRLSARASRYLYHTVKEAERRGLP 144
GD+W + KM D RI Q+ ++ + YL ++ RA Y+Y + ++R +P
Sbjct 57 GDLWAFIGDELKMGIPEND-RIREQKQKYLRNKSYLHDVTLRAEPYMYWIAGQVKKRNMP 115
Query 145 TELALLPVIESSYDPAATSSAAAAGLWQFIPSTGRIYGLRQTSLYDGRRDVVESTRAAYE 204
EL LLP++ES++DP ATS A AAG+WQ IPSTGR YGL+QT YD RRDVV ST AA
Sbjct 116 MELVLLPIVESAFDPHATSGANAAGIWQIIPSTGRNYGLKQTRNYDARRDVVASTTAALN 175
Query 205 FLGSLYNQF-GSWELALAAYNAGPGRIQQAINRNQAAGLPTDYWSLKLPGETMNYVPRFL 263
+ L F G W L +AAYN+G GR+ +AI N+A G TD+WSL LP ET YVP+ L
Sbjct 176 MMQRLNKMFDGDWLLTVAAYNSGEGRVMKAIKTNKARGKSTDFWSLPLPQETKQYVPKML 235
Query 264 AVAQIIKNPKAYGVSLPPIANRPHFREVTLNSAVDLNQISSVTGLSRTELYALNPGYRGD 323
A++ I+KN K YGV LP V L+S V++ +++ + G+S ++L N G +G
Sbjct 236 ALSDILKNSKRYGVRLPTTDESRALARVHLSSPVEMAKVADMAGISVSKLKTFNAGVKGS 295
Query 324 VIDPASPMRILIPADLSPSIDNKLKALKPSGNSGLWASSSAPVQPTPTVSISTTPRNSNS 383
+ + P +++P + + L + A VQ T+ TP NS
Sbjct 296 TLGASGPQYVMVPKKHADQL-----------RESLASGEIAAVQ--STLVADNTPLNSR- 341
Query 384 GQPLATTKTSPPVMTASASRPTVSSTVSSISSSIRKSATPKGADALAQFAASA 436
T S +++ ASR VS+ + +R S G +SA
Sbjct 342 ----VYTVRSGDTLSSIASRLGVSTKDLQQWNKLRGSKLKPGQSLTIGAGSSA 390
Score = 60.1 bits (144), Expect = 2e-12
Identities = 42/115 (37%), Positives = 63/115 (55%), Gaps = 15/115 (13%)
Query 908 VYTVKSGDTLGNIANRYSLQVDDLMQINGLRHSTLQAGQKIKL-TGDIEKVAASKTDSKS 966
VYTV+SGDTL +IA+R + DL Q N LR S L+ GQ + + G + A+ +DS +
Sbjct 342 VYTVRSGDTLSSIASRLGVSTKDLQQWNKLRGSKLKPGQSLTIGAGSSAQRLANNSDSIT 401
Query 967 KTVSKSSGKTEDYTVKAGESLHSISSRLGLSSKELADLNDLSARASLQRGQTIQI 1021
Y V+ G+SL SI+ R G++ K++ N S A+LQ G + +
Sbjct 402 ------------YRVRKGDSLSSIAKRHGVNIKDVMRWN--SDTANLQPGDKLTL 442
Score = 55.5 bits (132), Expect = 6e-11
Identities = 40/115 (35%), Positives = 62/115 (54%), Gaps = 5/115 (4%)
Query 589 YTVVSGDTLAIIAMKNGVSWRDIANWNQIDPNRTLYAGTSLYLYDAKPQIDSPAKSDTTP 648
YTV SGDTL+ IA + GVS +D+ WN++ ++ L G SL + SD+
Sbjct 343 YTVRSGDTLSSIASRLGVSTKDLQQWNKLRGSK-LKPGQSLTIGAGSSAQRLANNSDSI- 400
Query 649 DSYTVKANDSLTGVAEQFGLTVKQLADLNDLNVTSGLFVGQKLTLKDKKTSSTTS 703
+Y V+ DSL+ +A++ G+ +K + N + T+ L G KLTL K + S
Sbjct 401 -TYRVRKGDSLSSIAKRHGVNIKDVMRWN--SDTANLQPGDKLTLFVKNNNMPDS 452
Score = 53.5 bits (127), Expect = 2e-10
Identities = 36/107 (34%), Positives = 57/107 (53%), Gaps = 7/107 (7%)
Query 844 YVVQSGDSLNAVASKFNLQLDVLADLNGLNRNAGLRVGQKLKLTGEPSAHSTAKSKAKDN 903
Y V+SGD+L+++AS+ + L N L R + L+ GQ L + SA A +N
Sbjct 343 YTVRSGDTLSSIASRLGVSTKDLQQWNKL-RGSKLKPGQSLTIGAGSSAQRLA-----NN 396
Query 904 EIPDVYTVKSGDTLGNIANRYSLQVDDLMQINGLRHSTLQAGQKIKL 950
Y V+ GD+L +IA R+ + + D+M+ N + LQ G K+ L
Sbjct 397 SDSITYRVRKGDSLSSIAKRHGVNIKDVMRWNS-DTANLQPGDKLTL 442
Score = 51.2 bits (121), Expect = 1e-09
Identities = 53/197 (27%), Positives = 89/197 (45%), Gaps = 34/197 (17%)
Query 729 LKQIAERYGLSNQELADLTTGLNAGSNLYIG--QKINVPLHEVGEDDSKLNAKSAKAVPS 786
+ ++A+ G+S +L G+ GS L Q + VP + L + AV S
Sbjct 271 MAKVADMAGISVSKLKTFNAGVK-GSTLGASGPQYVMVPKKHADQLRESLASGEIAAVQS 329
Query 787 --------VKTENYKVQRGETLSSIATASKISLSELLELNNLKSATGLRAGQTIKIPAGS 838
+ + Y V+ G+TLSSIA+ +S +L + N L+ + L+ GQ++ I AGS
Sbjct 330 TLVADNTPLNSRVYTVRSGDTLSSIASRLGVSTKDLQQWNKLRGSK-LKPGQSLTIGAGS 388
Query 839 TIPD--------EYVVQSGDSLNAVASKFNLQLDVLADLNGLNRNAGLRVGQKLKLTGEP 890
+ Y V+ GDSL+++A + + + + N + A L+ G KL L
Sbjct 389 SAQRLANNSDSITYRVRKGDSLSSIAKRHGVNIKDVMRWN--SDTANLQPGDKLTLF--- 443
Query 891 SAHSTAKSKAKDNEIPD 907
K+N +PD
Sbjct 444 ---------VKNNNMPD 451
Score = 50.8 bits (120), Expect = 2e-09
Identities = 31/102 (30%), Positives = 61/102 (60%), Gaps = 18/102 (18%)
Query 979 YTVKAGESLHSISSRLGLSSKELADLNDLSARASLQRGQTIQI------------PKTVT 1026
YTV++G++L SI+SRLG+S+K+L N L + L+ GQ++ I ++T
Sbjct 343 YTVRSGDTLSSIASRLGVSTKDLQQWNKLRG-SKLKPGQSLTIGAGSSAQRLANNSDSIT 401
Query 1027 EYKIKRGDTLNGLASKYGMALAEL----ADLNGLKPSTSLRI 1064
Y++++GD+L+ +A ++G+ + ++ +D L+P L +
Sbjct 402 -YRVRKGDSLSSIAKRHGVNIKDVMRWNSDTANLQPGDKLTL 442
Score = 44.7 bits (104), Expect = 1e-07
Identities = 44/168 (26%), Positives = 77/168 (46%), Gaps = 22/168 (13%)
Query 662 VAEQFGLTVKQLADLN------DLNVTSGLFVGQKLTLKDKKTSSTTSARHTAESKT--A 713
VA+ G++V +L N L + +V D+ S S A T A
Sbjct 274 VADMAGISVSKLKTFNAGVKGSTLGASGPQYVMVPKKHADQLRESLASGEIAAVQSTLVA 333
Query 714 KQVP--TKLYTVRRGEYLKQIAERYGLSNQELADLTTGLNAGSNLYIGQKINVPLHEVGE 771
P +++YTVR G+ L IA R G+S ++L GS L GQ + + G
Sbjct 334 DNTPLNSRVYTVRSGDTLSSIASRLGVSTKDLQQWNK--LRGSKLKPGQSLTI---GAGS 388
Query 772 DDSKLNAKSAKAVPSVKTENYKVQRGETLSSIATASKISLSELLELNN 819
+L A ++ ++ Y+V++G++LSSIA +++ +++ N+
Sbjct 389 SAQRL-ANNSDSI------TYRVRKGDSLSSIAKRHGVNIKDVMRWNS 429
Score = 35.4 bits (80), Expect = 1e-04
Identities = 22/63 (35%), Positives = 32/63 (51%), Gaps = 11/63 (17%)
Query 588 TYTVVSGDTLAIIAMKNGVSWRDIANWNQIDPNRTLYAGTSLYLYDAKPQIDSPAKSDTT 647
TY V GD+L+ IA ++GV+ +D+ WN N L G L L+ K++
Sbjct 401 TYRVRKGDSLSSIAKRHGVNIKDVMRWNSDTAN--LQPGDKLTLF---------VKNNNM 449
Query 648 PDS 650
PDS
Sbjct 450 PDS 452
>O07532 Peptidoglycan endopeptidase LytF [Bacillus subtilis (strain
168)]
Length=488
Score = 147 bits (370), Expect = 2e-40
Identities = 119/385 (31%), Positives = 194/385 (50%), Gaps = 45/385 (12%)
Query 621 RTLYAGTSLYLYDAKPQIDSPAKSDTTPDSYTVKANDSLTGVAEQFGLTVKQLADLNDLN 680
+ L AG + + +PA++ T VK+ DSL +A+ + +V L N L+
Sbjct 3 KKLAAGLTASAIVGTTLVVTPAEAATIK----VKSGDSLWKLAQTYNTSVAALTSANHLS 58
Query 681 VTSGLFVGQKLTLKDKKTSSTTSARHTAESKTAKQVPTKLYTVRRGEYLKQIAERYGLSN 740
T L +GQ LT+ K+S+++S S T K+ + +YTV+ G+ L IA + ++
Sbjct 59 TTV-LSIGQTLTIPGSKSSTSSST----SSSTTKKSGSSVYTVKSGDSLWLIANEFKMTV 113
Query 741 QELADLTTGLN-----AGSNLYIGQKINVPLHEVGEDDSKLNAKSAKAVPSVK------- 788
QEL L GL+ AG L + ++ + +S ++ S+ S K
Sbjct 114 QELKKLN-GLSSDLIRAGQKLKVSGTVSSSSSSSKKSNSNKSSSSSSKSSSNKSSSSSSS 172
Query 789 TENYKVQRGETLSSIATASKISLSELLELNNLKSATGLRAGQTIKIPAG----------- 837
T YKVQ G++L IA +S++EL LNNLKS T + Q +K +
Sbjct 173 TGTYKVQLGDSLWKIANKVNMSIAELKVLNNLKSDT-IYVNQVLKTKSSGSDTSSKDNSS 231
Query 838 ----STIPDEYVVQSGDSLNAVASKFNLQLDVLADLNGLNRNAGLRVGQKLKLTGEPSAH 893
++ +Y V+SGDSL +A+ +NL + + ++N L + L VGQ LKLTG+ S+
Sbjct 232 KSNQTSATTKYTVKSGDSLWKIANNYNLTVQQIRNINNLKSDV-LYVGQVLKLTGKASSG 290
Query 894 STAKSKAKDNE---IPDVYTVKSGDTLGNIANRYSLQVDDLMQINGLRHSTLQAGQKIKL 950
S++ S + N YTVKSGD+L IA ++++ + + N L+ LQ GQK+ +
Sbjct 291 SSSSSSSSSNASSGTTTTYTVKSGDSLWVIAQKFNVTAQQIREKNNLKTDVLQVGQKLVI 350
Query 951 TGDIEKVAASKTDSKSKTVSKSSGK 975
+G K ++S + S T S +S K
Sbjct 351 SG---KASSSSSSGSSNTTSSTSAK 372
Score = 117 bits (294), Expect = 8e-31
Identities = 88/281 (31%), Positives = 140/281 (50%), Gaps = 38/281 (14%)
Query 826 LRAGQTIKIPAGSTI---PDEYV---VQSGDSLNAVASKFNLQLDVLADLNGLNRNAGLR 879
L AG T G+T+ P E V+SGDSL +A +N + L N L+ L
Sbjct 5 LAAGLTASAIVGTTLVVTPAEAATIKVKSGDSLWKLAQTYNTSVAALTSANHLSTTV-LS 63
Query 880 VGQKLKLTGEPSAHSTAKSKAKDNEI-PDVYTVKSGDTLGNIANRYSLQVDDLMQINGLR 938
+GQ L + G S+ S++ S + + VYTVKSGD+L IAN + + V +L ++NGL
Sbjct 64 IGQTLTIPGSKSSTSSSTSSSTTKKSGSSVYTVKSGDSLWLIANEFKMTVQELKKLNGLS 123
Query 939 HSTLQAGQKIKLTGDI------------EKVAASKTDSKSKTVSKSSGKTEDYTVKAGES 986
++AGQK+K++G + K ++S + S S S SS T Y V+ G+S
Sbjct 124 SDLIRAGQKLKVSGTVSSSSSSSKKSNSNKSSSSSSKSSSNKSSSSSSSTGTYKVQLGDS 183
Query 987 LHSISSRLGLSSKELADLNDL-----------------SARASLQRGQTIQIPKTVTEYK 1029
L I++++ +S EL LN+L S +S T+Y
Sbjct 184 LWKIANKVNMSIAELKVLNNLKSDTIYVNQVLKTKSSGSDTSSKDNSSKSNQTSATTKYT 243
Query 1030 IKRGDTLNGLASKYGMALAELADLNGLKPSTSLRIGDVIKV 1070
+K GD+L +A+ Y + + ++ ++N LK S L +G V+K+
Sbjct 244 VKSGDSLWKIANNYNLTVQQIRNINNLK-SDVLYVGQVLKL 283
Score = 117 bits (292), Expect = 1e-30
Identities = 92/339 (27%), Positives = 160/339 (47%), Gaps = 61/339 (18%)
Query 784 VPSVKTENYKVQRGETLSSIATASKISLSELLELNNLKSATGLRAGQTIKIPAGSTIPDE 843
V + KV+ G++L +A S++ L N+L S T L GQT+ IP +
Sbjct 21 VTPAEAATIKVKSGDSLWKLAQTYNTSVAALTSANHL-STTVLSIGQTLTIPGSKSSTSS 79
Query 844 --------------YVVQSGDSLNAVASKFNLQLDVLADLNGLNRNAGLRVGQKLKLTGE 889
Y V+SGDSL +A++F + + L LNGL+ + +R GQKLK++G
Sbjct 80 STSSSTTKKSGSSVYTVKSGDSLWLIANEFKMTVQELKKLNGLSSDL-IRAGQKLKVSGT 138
Query 890 PSAHSTAKSKAKDNEIPD------------------VYTVKSGDTLGNIANRYSLQVDDL 931
S+ S++ K+ N+ Y V+ GD+L IAN+ ++ + +L
Sbjct 139 VSSSSSSSKKSNSNKSSSSSSKSSSNKSSSSSSSTGTYKVQLGDSLWKIANKVNMSIAEL 198
Query 932 MQINGLRHSTLQAGQKIKLTGDIEKVAASKTDSK-SKTVSKSSGKTEDYTVKAGESLHSI 990
+N L+ T+ Q +K K + S T SK + + S + T YTVK+G+SL I
Sbjct 199 KVLNNLKSDTIYVNQVLKT-----KSSGSDTSSKDNSSKSNQTSATTKYTVKSGDSLWKI 253
Query 991 SSRLGLSSKELADLNDLSARASLQRGQTIQIPK-------------------TVTEYKIK 1031
++ L+ +++ ++N+L + L GQ +++ T T Y +K
Sbjct 254 ANNYNLTVQQIRNINNLKSDV-LYVGQVLKLTGKASSGSSSSSSSSSNASSGTTTTYTVK 312
Query 1032 RGDTLNGLASKYGMALAELADLNGLKPSTSLRIGDVIKV 1070
GD+L +A K+ + ++ + N LK L++G + +
Sbjct 313 SGDSLWVIAQKFNVTAQQIREKNNLKTDV-LQVGQKLVI 350
Score = 79.7 bits (195), Expect = 2e-18
Identities = 74/274 (27%), Positives = 133/274 (49%), Gaps = 33/274 (12%)
Query 583 KGKRSTYTVVSGDTLAIIAMKNGVSWRDIANWNQIDPNRTLYAGTSLYL----------- 631
K S YTV SGD+L +IA + ++ +++ N + + + AG L +
Sbjct 88 KSGSSVYTVKSGDSLWLIANEFKMTVQELKKLNGLSSD-LIRAGQKLKVSGTVSSSSSSS 146
Query 632 ----------YDAKPQIDSPAKSDTTPDSYTVKANDSLTGVAEQFGLTVKQLADLNDLNV 681
+K + + S ++ +Y V+ DSL +A + +++ +L LN+L
Sbjct 147 KKSNSNKSSSSSSKSSSNKSSSSSSSTGTYKVQLGDSLWKIANKVNMSIAELKVLNNLK- 205
Query 682 TSGLFVGQKLTLKDKKTSSTTSARHTAESKTAKQVPTKLYTVRRGEYLKQIAERYGLSNQ 741
+ ++V Q LK K + S TS++ + SK+ + T YTV+ G+ L +IA Y L+ Q
Sbjct 206 SDTIYVNQ--VLKTKSSGSDTSSKDNS-SKSNQTSATTKYTVKSGDSLWKIANNYNLTVQ 262
Query 742 ELADLTTGLNAGSN-LYIGQKINVPLHEVGEDDSKLNAKSAKAVPSVKTENYKVQRGETL 800
++ ++ N S+ LY+GQ + L S ++ S+ S T Y V+ G++L
Sbjct 263 QIRNIN---NLKSDVLYVGQVLK--LTGKASSGSSSSSSSSSNASSGTTTTYTVKSGDSL 317
Query 801 SSIATASKISLSELLELNNLKSATGLRAGQTIKI 834
IA ++ ++ E NNLK+ L+ GQ + I
Sbjct 318 WVIAQKFNVTAQQIREKNNLKTDV-LQVGQKLVI 350
Score = 67.8 bits (164), Expect = 9e-15
Identities = 94/379 (25%), Positives = 152/379 (40%), Gaps = 38/379 (10%)
Query 350 LKPSGNSGLWASSSAPVQPTPTVSISTTPRNSNSGQPLATTKTSPPVMTASASRPTVSST 409
+K LW A T ++++ S + + T T P +S S T SST
Sbjct 29 IKVKSGDSLW--KLAQTYNTSVAALTSANHLSTTVLSIGQTLTIPG-SKSSTSSSTSSST 85
Query 410 VSSISSSIRKSATPKGADALAQFAASADIPSAPRIPVAVTPATNVKQVAIEPPISKAERQ 469
SS+ T K D+L A +T K + + +A ++
Sbjct 86 TKKSGSSV---YTVKSGDSLWLIANE----------FKMTVQELKKLNGLSSDLIRAGQK 132
Query 470 DIVAVIRAEGEKESVKQALEPQPTQAEKDQVLAELSAIVPKGTQIVDPLDGKIKLTAIQT 529
V+ + S K + + K S+ GT V D K+ A +
Sbjct 133 LKVSGTVSSSSSSSKKSNSNKSSSSSSKSSSNKSSSSSSSTGTYKVQLGDSLWKI-ANKV 191
Query 530 SQSVADQQGKEVTKE--FAYPKALADNVSASDQDVQRNSNKPYIKTDTDIVVVQPKGKRS 587
+ S+A+ + K + L S SD + NS+K + T +
Sbjct 192 NMSIAELKVLNNLKSDTIYVNQVLKTKSSGSDTSSKDNSSKSNQTSAT-----------T 240
Query 588 TYTVVSGDTLAIIAMKNGVSWRDIANWNQIDPNRTLYAGTSLYLYDAKPQIDSPAKSDT- 646
YTV SGD+L IA ++ + I N N + + LY G L L S + S +
Sbjct 241 KYTVKSGDSLWKIANNYNLTVQQIRNINNLKSD-VLYVGQVLKLTGKASSGSSSSSSSSS 299
Query 647 -----TPDSYTVKANDSLTGVAEQFGLTVKQLADLNDLNVTSGLFVGQKLTLKDKKTSST 701
T +YTVK+ DSL +A++F +T +Q+ + N+L T L VGQKL + K +SS+
Sbjct 300 NASSGTTTTYTVKSGDSLWVIAQKFNVTAQQIREKNNLK-TDVLQVGQKLVISGKASSSS 358
Query 702 TSARHTAESKTAKQVPTKL 720
+S S T+ ++ T +
Sbjct 359 SSGSSNTTSSTSAKINTMI 377
Score = 39.3 bits (90), Expect = 6e-06
Identities = 27/85 (32%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Query 584 GKRSTYTVVSGDTLAIIAMKNGVSWRDIANWNQIDPNRTLYAGTSLYLYDAKPQIDSPAK 643
G +TYTV SGD+L +IA K V+ + I N + + L G L + K S +
Sbjct 304 GTTTTYTVKSGDSLWVIAQKFNVTAQQIREKNNLKTD-VLQVGQKLVI-SGKASSSSSSG 361
Query 644 SDTTPDSYTVKANDSLTGVAEQFGL 668
S T S + K N ++ Q G+
Sbjct 362 SSNTTSSTSAKINTMISAAKAQLGV 386
Score = 28.5 bits (62), Expect = 0.014
Identities = 20/56 (36%), Positives = 27/56 (48%), Gaps = 5/56 (9%)
Query 12 SVASLFKFTVLGSAIAALGLT-----GCSSTPQTTHTKTTKNVGSGFLDASSLDSL 62
SVA+L L + + ++G T SST +T + TTK GS S DSL
Sbjct 47 SVAALTSANHLSTTVLSIGQTLTIPGSKSSTSSSTSSSTTKKSGSSVYTVKSGDSL 102
>P37710 Autolysin [Enterococcus faecalis (strain ATCC 700802 /
V583)]
Length=737
Score = 140 bits (352), Expect = 3e-37
Identities = 186/729 (26%), Positives = 299/729 (41%), Gaps = 112/729 (15%)
Query 349 ALKPSGNSGLWASSSAPVQP----TPTVSISTTPRNSNSGQPLATTKTSPPVMTASASRP 404
A P+ +GL + + P PT STT ++ T S TA ++ P
Sbjct 64 AQAPTTETGLVETPTTETTPGTTEQPTTDSSTTTESTTESSKETPTTPSTEQPTADSTTP 123
Query 405 TVSSTVSSISSSIRKSATPKGADALAQFAASADIPSAPRIPVAVTPATNVKQVAIEPPIS 464
S T S + I TP A AA AVTP VK P
Sbjct 124 VESGTTDSSVAEI----TPVAPSATESEAAP-----------AVTPDDEVK----VPEAR 164
Query 465 KAERQDIVAVIRAEGEKESVKQALEPQPTQAEKDQVLAEL---SAIVPKG----TQIVDP 517
A Q A+ + E + + A+ + + A + AIV G T P
Sbjct 165 VASAQTFSALSPTQSPSEFIAELARCAQPIAQANDLYASVMMAQAIVESGWGASTLSKAP 224
Query 518 LDGKIKLTAIQTSQSVADQQGKEVTKEFAYPKALADNVSASDQDVQRNSNKPYIKTDTDI 577
+ QSV + + ++ K + + Q N++
Sbjct 225 NYNLFGIKGSYNGQSVYMDTWEYLNGKWLVKKEPFRKYPSYMESFQDNAH---------- 274
Query 578 VVVQPKGKRSTYTVVSGDTLAIIAMKNGVSWRDIANW----NQIDPNRTLYAGTSLYLYD 633
V++ ++ +G N S+RD W DP+ + Y+
Sbjct 275 -VLKTTSFQAGVYYYAG-----AWKSNTSSYRDATAWLTGRYATDPSYNAKLNNVITAYN 328
Query 634 AKPQIDSPAKSDTTPDS------------------YTVKANDSLTGVAEQFGLTVKQLAD 675
Q D+P+ T YTVK+ D+L +A Q+G++V A+
Sbjct 329 L-TQYDTPSSGGNTGGGTVNPGTGGSNNQSGTNTYYTVKSGDTLNKIAAQYGVSV---AN 384
Query 676 LNDLNVTSG--LFVGQKLTLKDKKTSSTTSARHTAESKTAKQVPTKLYTVRRGEYLKQIA 733
L N SG +FVGQKL +K K S T + S + YTV+ G+ L +IA
Sbjct 385 LRSWNGISGDLIFVGQKLIVK-KGASGNTGGSGSGGSNNNQSGTNTYYTVKSGDTLNKIA 443
Query 734 ERYGLSNQELADLTTGLNAGSNLYIGQKINVPLHEVGEDDSKLNAKSAKAVPSVKTENYK 793
+YG+S L G+ +G +++GQK+ V G N S T Y
Sbjct 444 AQYGVSVANLRS-WNGI-SGDLIFVGQKLIVKKGASGNTGGSNNGGSNNNQSGTNT-YYT 500
Query 794 VQRGETLSSIATASKISLSELLELNNLKSATGLRAGQTIKIPAG---------------- 837
++ G+TL+ IA +S++ L N + S + AGQ I + G
Sbjct 501 IKSGDTLNKIAAQYGVSVANLRSWNGI-SGDLIFAGQKIIVKKGTSGNTGGSSNGGSNNN 559
Query 838 -STIPDEYVVQSGDSLNAVASKFNLQLDVLADLNGLNRNAG--LRVGQKLKLTGEPSAHS 894
S Y ++SGD+LN ++++F + +A+L N +G + GQK+ + ++ S
Sbjct 560 QSGTNTYYTIKSGDTLNKISAQFGVS---VANLQAWNNISGSLIFAGQKIIVKKGANSGS 616
Query 895 TAKSKAKDN--EIPDVYTVKSGDTLGNIANRYSLQVDDLMQINGLRHSTLQAGQKIKLTG 952
T +K +N YT+KSGDTL I+ ++ + V +L NG++ + AGQ I
Sbjct 617 TNTNKPTNNGGGATTSYTIKSGDTLNKISAQFGVSVANLRSWNGIKGDLIFAGQTI---- 672
Query 953 DIEKVAASKTDSKSKTVSKSSGKTEDYTVKAGESLHSISSRLGLSSKELADLNDLSARAS 1012
I K AS + S T + +SGK +TVK+G+SL +S + G+S +++ LN LS +
Sbjct 673 -IVKKGASAGGNASST-NSASGKR--HTVKSGDSLWGLSMQYGISIQKIKQLNGLSG-DT 727
Query 1013 LQRGQTIQI 1021
+ GQT+++
Sbjct 728 IYIGQTLKV 736
Score = 134 bits (338), Expect = 2e-35
Identities = 107/384 (28%), Positives = 185/384 (48%), Gaps = 44/384 (11%)
Query 721 YTVRRGEYLKQIAERYGLSNQELADLTTGLNAGSNLYIGQKINVPLHEVGEDDSKLNAKS 780
YTV+ G+ L +IA +YG+S L G++ G +++GQK+ V G + S
Sbjct 363 YTVKSGDTLNKIAAQYGVSVANLRSWN-GIS-GDLIFVGQKLIVKKGASGNTGGSGSGGS 420
Query 781 AKAVPSVKTENYKVQRGETLSSIATASKISLSELLELNNLKSATGLRAGQTIKIPAGST- 839
T Y V+ G+TL+ IA +S++ L N + S + GQ + + G++
Sbjct 421 NNNQSGTNTY-YTVKSGDTLNKIAAQYGVSVANLRSWNGI-SGDLIFVGQKLIVKKGASG 478
Query 840 ----------------IPDEYVVQSGDSLNAVASKFNLQLDVLADLNGLNRN---AGLRV 880
Y ++SGD+LN +A+++ + + L NG++ + AG ++
Sbjct 479 NTGGSNNGGSNNNQSGTNTYYTIKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKI 538
Query 881 GQKLKLTGEPSAHSTAKSKAKDNEIPDVYTVKSGDTLGNIANRYSLQVDDLMQINGLRHS 940
K +G S S + YT+KSGDTL I+ ++ + V +L N + S
Sbjct 539 IVKKGTSGNTGGSSNGGSNNNQSGTNTYYTIKSGDTLNKISAQFGVSVANLQAWNNISGS 598
Query 941 TLQAGQKIKLTGDIEKVAASKTDSKSKTVSKSSGKTEDYTVKAGESLHSISSRLGLSSKE 1000
+ AGQKI ++K A S + + +K + G T YT+K+G++L+ IS++ G+S
Sbjct 599 LIFAGQKII----VKKGANSGSTNTNKPTNNGGGATTSYTIKSGDTLNKISAQFGVSVAN 654
Query 1001 LADLNDLSARASLQRGQTIQIPKTVT--------------EYKIKRGDTLNGLASKYGMA 1046
L N + + GQTI + K + + +K GD+L GL+ +YG++
Sbjct 655 LRSWNGIKGDL-IFAGQTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGIS 713
Query 1047 LAELADLNGLKPSTSLRIGDVIKV 1070
+ ++ LNGL T + IG +KV
Sbjct 714 IQKIKQLNGLSGDT-IYIGQTLKV 736
Score = 50.8 bits (120), Expect = 2e-09
Identities = 33/107 (31%), Positives = 54/107 (50%), Gaps = 21/107 (20%)
Query 970 SKSSGKTEDYTVKAGESLHSISSRLGLSSKELADLNDLSARASLQRGQTIQIPK------ 1023
+ SG YTVK+G++L+ I+++ G+S L N +S + GQ + + K
Sbjct 354 NNQSGTNTYYTVKSGDTLNKIAAQYGVSVANLRSWNGISGDL-IFVGQKLIVKKGASGNT 412
Query 1024 --------------TVTEYKIKRGDTLNGLASKYGMALAELADLNGL 1056
T T Y +K GDTLN +A++YG+++A L NG+
Sbjct 413 GGSGSGGSNNNQSGTNTYYTVKSGDTLNKIAAQYGVSVANLRSWNGI 459
Score = 23.9 bits (50), Expect = 0.39
Identities = 14/34 (41%), Positives = 21/34 (62%), Gaps = 1/34 (3%)
Query 292 TLNSAVDLNQISSVTGLSRTELYALNPGYRGDVI 325
T+ S LN+IS+ G+S L + N G +GD+I
Sbjct 634 TIKSGDTLNKISAQFGVSVANLRSWN-GIKGDLI 666
Score = 21.6 bits (44), Expect = 2.0
Identities = 13/34 (38%), Positives = 20/34 (59%), Gaps = 1/34 (3%)
Query 292 TLNSAVDLNQISSVTGLSRTELYALNPGYRGDVI 325
T+ S LN+I++ G+S L + N G GD+I
Sbjct 500 TIKSGDTLNKIAAQYGVSVANLRSWN-GISGDLI 532
Score = 21.2 bits (43), Expect = 2.6
Identities = 13/34 (38%), Positives = 20/34 (59%), Gaps = 1/34 (3%)
Query 292 TLNSAVDLNQISSVTGLSRTELYALNPGYRGDVI 325
T+ S LN+I++ G+S L + N G GD+I
Sbjct 364 TVKSGDTLNKIAAQYGVSVANLRSWN-GISGDLI 396
Score = 21.2 bits (43), Expect = 2.6
Identities = 13/34 (38%), Positives = 20/34 (59%), Gaps = 1/34 (3%)
Query 292 TLNSAVDLNQISSVTGLSRTELYALNPGYRGDVI 325
T+ S LN+I++ G+S L + N G GD+I
Sbjct 432 TVKSGDTLNKIAAQYGVSVANLRSWN-GISGDLI 464
Score = 20.8 bits (42), Expect = 3.4
Identities = 11/26 (42%), Positives = 15/26 (58%), Gaps = 0/26 (0%)
Query 292 TLNSAVDLNQISSVTGLSRTELYALN 317
T+ S LN+IS+ G+S L A N
Sbjct 568 TIKSGDTLNKISAQFGVSVANLQAWN 593
>P32820 Putative tributyltin chloride resistance protein [Alteromonas
sp. (strain M-1)]
Length=207
Score = 115 bits (289), Expect = 2e-32
Identities = 71/180 (39%), Positives = 106/180 (59%), Gaps = 9/180 (5%)
Query 124 SARASRYLYHTVKEAERRGLPTELALLPVIESSYDPAATSSAAAAGLWQFIPSTGRIYGL 183
SARA YLY+ V E E+R LP ELAL+P+IES ++ +A S A+GLWQ P+ + + +
Sbjct 19 SARAEPYLYYIVTEVEKRNLPIELALMPLIESDFNASAYSHKHASGLWQLTPAIAKYFKV 78
Query 184 RQTSLYDGRRDVVESTRAAYEFLGSLYNQF-GSWELALAAYNAGPGRIQQAIN--RNQAA 240
+ + YDGR+DV++STRAA F+ L+ +F G W A+AA N G GR+ +AI+ +N+A
Sbjct 79 QISPWYDGRQDVIDSTRAALNFMEYLHKRFDGDWYHAIAALNLGEGRVLRAISNIKNKAN 138
Query 241 GLPTDYWSLKLPGETMNYVPRFLAVAQIIKNPKAYGVSLPPIANRPHFREVTLNSAVDLN 300
L + LK + + + IIK PK + P I N P + ++ AV L+
Sbjct 139 PL---IFQLKTAQTNQSVRAKRTSCGTIIKKPKN---AFPAILNSPTIAVLPVDCAVILD 192
>P39046 Muramidase-2 [Enterococcus hirae (strain ATCC 9790 / DSM
20160 / JCM 8729 / LMG 6399 / NBRC 3181 / NCIMB 6459 / NCDO
1258 / NCTC 12367 / WDCM 00089 / R)]
Length=666
Score = 116 bits (290), Expect = 9e-30
Identities = 100/419 (24%), Positives = 194/419 (46%), Gaps = 68/419 (16%)
Query 587 STYTVVSGDTLAIIAMKNGVSWRDIANWNQIDPNRTLYAGTSLYLYDAKPQIDSPAKSDT 646
+TYTV SGD++ I+ G++ + WN I N +Y G L + + S +
Sbjct 255 TTYTVKSGDSVWGISHSFGITMAQLIEWNNIK-NNFIYPGQKLTIKGGQSAGSSTTNTGN 313
Query 647 TPDS--------------------YTVKANDSLTGVAEQFGLTVKQLADLNDLNVTSGLF 686
S YTVK+ DS+ +A G+++ QL + N++ + ++
Sbjct 314 NASSGNTSGNTNTSGSTGQATGAKYTVKSGDSVWKIANDHGISMNQLIEWNNIK-NNFVY 372
Query 687 VGQKLTLKDKKTSSTTSARHTAESKTAKQVPT-------KLYTVRRGEYLKQIAERYGLS 739
GQ+L + +S++ S +T+ T+ YTV+ GE + ++ ++G+S
Sbjct 373 PGQQLVVSKGSSSASGSTSNTSTGNTSSNTANTGSTTSGSTYTVKAGESVWSVSNKFGIS 432
Query 740 NQELADLTTGLNAGSNLYIGQKINVPLHEVGEDDS------KLNAKSAKAVPSVKTENYK 793
+L N + +Y GQK+ V + S K A S + + Y
Sbjct 433 MNQLIQWNNIKN--NFIYPGQKLIVKGGSSSSNASTSTANNKNTASSNTSSTATGQATYT 490
Query 794 VQRGETLSSIATASKISLSELLELNNLKS--------------ATGLRAGQTIKIPAG-- 837
V+ GE++ +A + IS+++L+E NN+K+ ++ A TIK A
Sbjct 491 VKAGESVWGVANKNGISMNQLIEWNNIKNNFIYPGQKLIVKGGSSKASATATIKPTASTP 550
Query 838 --------STIPDEYVVQSGDSLNAVASKFNLQLDVLADLNGLNRNAGLRVGQKLKLTGE 889
ST +Y V++G+S+ VA+K ++ +D L + N + N + GQ++ +
Sbjct 551 ASTTPTASSTGDTKYTVKAGESVWGVANKHHITMDQLIEWNNIKNNF-IYPGQEVIVKKG 609
Query 890 PSAHSTAKSKAKDNEIPDVYTVKSGDTLGNIANRYSLQVDDLMQINGLRHSTLQAGQKI 948
+ + AKS K YTVK+G+++ +A+ + + ++ L++ N ++++ + GQ++
Sbjct 610 TAQSTPAKSDEK------TYTVKAGESVWGVADSHGITMNQLIEWNNIKNNFIYPGQQL 662
Score = 114 bits (285), Expect = 3e-29
Identities = 116/504 (23%), Positives = 221/504 (44%), Gaps = 82/504 (16%)
Query 620 NRTLYAGTSLYLYDAKPQIDSPAKSD---TTPDSYTVKANDSLTGVAEQFGLTVKQLADL 676
N YAGT + + K D+ A T Y K N+ +T +GLT
Sbjct 165 NGYYYAGT--WKSNTKSYTDATACLTGRYATDPGYAGKLNNIIT----TYGLTKYDTPAS 218
Query 677 NDLNVTSGLFVGQKLTLKDKKTSSTTSARHTAESKTAKQVPTKLYTVRRGEYLKQIAERY 736
N G+ +G + S +TS + T YTV+ G+ + I+ +
Sbjct 219 G--NAGGGVTIGNGGNTGNTSNSGSTSGNSGGSATTTGTT----YTVKSGDSVWGISHSF 272
Query 737 GLSNQELADLTTGLNAGSNLYIGQKINVPLHE-VGEDDSKL--NAKSAKAVPSVKTEN-- 791
G++ +L + N + +Y GQK+ + + G + NA S + T
Sbjct 273 GITMAQLIEWNNIKN--NFIYPGQKLTIKGGQSAGSSTTNTGNNASSGNTSGNTNTSGST 330
Query 792 -------YKVQRGETLSSIATASKISLSELLELNNLKS-------------ATGLRAGQT 831
Y V+ G+++ IA IS+++L+E NN+K+ + +G T
Sbjct 331 GQATGAKYTVKSGDSVWKIANDHGISMNQLIEWNNIKNNFVYPGQQLVVSKGSSSASGST 390
Query 832 IKIPAGSTIPDE-----------YVVQSGDSLNAVASKFNLQLDVLADLNGLNRNAGLRV 880
G+T + Y V++G+S+ +V++KF + ++ L N + N +
Sbjct 391 SNTSTGNTSSNTANTGSTTSGSTYTVKAGESVWSVSNKFGISMNQLIQWNNIKNNF-IYP 449
Query 881 GQKLKLTGEPSAHSTAKSKAKDNEIPD-----------VYTVKSGDTLGNIANRYSLQVD 929
GQKL + G S+ + + S A + YTVK+G+++ +AN+ + ++
Sbjct 450 GQKLIVKGGSSSSNASTSTANNKNTASSNTSSTATGQATYTVKAGESVWGVANKNGISMN 509
Query 930 DLMQINGLRHSTLQAGQKIKLTGDIEKVAASKT------DSKSKTVSKSSGKTEDYTVKA 983
L++ N ++++ + GQK+ + G K +A+ T S T + SS YTVKA
Sbjct 510 QLIEWNNIKNNFIYPGQKLIVKGGSSKASATATIKPTASTPASTTPTASSTGDTKYTVKA 569
Query 984 GESLHSISSRLGLSSKELADLNDLSARASLQRGQTIQIPKTVTE----------YKIKRG 1033
GES+ ++++ ++ +L + N++ + GQ + + K + Y +K G
Sbjct 570 GESVWGVANKHHITMDQLIEWNNIK-NNFIYPGQEVIVKKGTAQSTPAKSDEKTYTVKAG 628
Query 1034 DTLNGLASKYGMALAELADLNGLK 1057
+++ G+A +G+ + +L + N +K
Sbjct 629 ESVWGVADSHGITMNQLIEWNNIK 652
Score = 90.9 bits (224), Expect = 8e-22
Identities = 81/303 (27%), Positives = 139/303 (46%), Gaps = 36/303 (12%)
Query 541 VTKEFAYPKALADNVSASDQDVQRNSNKPYIKTDTDIVVVQPKGKRSTYTVVSGDTLAII 600
+ F YP S SN T ++ STYTV +G+++ +
Sbjct 366 IKNNFVYPGQQLVVSKGSSSASGSTSNTSTGNTSSNTANTGSTTSGSTYTVKAGESVWSV 425
Query 601 AMKNGVSWRDIANWNQIDPNRTLYAGTSLYLYDAKPQID---SPAKSDTTPDS------- 650
+ K G+S + WN I N +Y G L + + S A + T S
Sbjct 426 SNKFGISMNQLIQWNNI-KNNFIYPGQKLIVKGGSSSSNASTSTANNKNTASSNTSSTAT 484
Query 651 ----YTVKANDSLTGVAEQFGLTVKQLADLNDLNVTSGLFVGQKLTLK--DKKTSSTTSA 704
YTVKA +S+ GVA + G+++ QL + N++ + ++ GQKL +K K S+T +
Sbjct 485 GQATYTVKAGESVWGVANKNGISMNQLIEWNNIK-NNFIYPGQKLIVKGGSSKASATATI 543
Query 705 RHTAE-----SKTAKQVPTKLYTVRRGEYLKQIAERYGLSNQELADLTTGLNAGSNLYIG 759
+ TA + TA YTV+ GE + +A ++ ++ +L + N + +Y G
Sbjct 544 KPTASTPASTTPTASSTGDTKYTVKAGESVWGVANKHHITMDQLIEWNNIKN--NFIYPG 601
Query 760 QKINVPLHEVGEDDSKLNAKSAKAVPSVKTENYKVQRGETLSSIATASKISLSELLELNN 819
Q++ V K A+S A KT Y V+ GE++ +A + I++++L+E NN
Sbjct 602 QEVIV---------KKGTAQSTPAKSDEKT--YTVKAGESVWGVADSHGITMNQLIEWNN 650
Query 820 LKS 822
+K+
Sbjct 651 IKN 653
Score = 78.2 bits (191), Expect = 7e-18
Identities = 67/246 (27%), Positives = 116/246 (47%), Gaps = 37/246 (15%)
Query 537 QGKEVTKEFAYPKA---LADNVSASDQDVQRNSNKPYIKTDTDIVVVQPKGKRSTYTVVS 593
Q + F YP + S+S+ +NK ++T ++TYTV +
Sbjct 438 QWNNIKNNFIYPGQKLIVKGGSSSSNASTSTANNKNTASSNTSSTATG----QATYTVKA 493
Query 594 GDTLAIIAMKNGVSWRDIANWNQIDPNRTLYAGTSLYLYDA----------KPQIDSPAK 643
G+++ +A KNG+S + WN I N +Y G L + KP +PA
Sbjct 494 GESVWGVANKNGISMNQLIEWNNI-KNNFIYPGQKLIVKGGSSKASATATIKPTASTPAS 552
Query 644 SDTTPDS-----YTVKANDSLTGVAEQFGLTVKQLADLNDLNVTSGLFVGQKLTLKDKKT 698
+ T S YTVKA +S+ GVA + +T+ QL + N++ + ++ GQ++ +K
Sbjct 553 TTPTASSTGDTKYTVKAGESVWGVANKHHITMDQLIEWNNIK-NNFIYPGQEVIVK---- 607
Query 699 SSTTSARHTAESKTAKQVPTKLYTVRRGEYLKQIAERYGLSNQELADLTTGLNAGSNLYI 758
+ TA+S AK K YTV+ GE + +A+ +G++ +L + N + +Y
Sbjct 608 ------KGTAQSTPAKS-DEKTYTVKAGESVWGVADSHGITMNQLIEWNNIKN--NFIYP 658
Query 759 GQKINV 764
GQ++ V
Sbjct 659 GQQLIV 664
Score = 29.3 bits (64), Expect = 0.009
Identities = 14/37 (38%), Positives = 21/37 (57%), Gaps = 0/37 (0%)
Query 360 ASSSAPVQPTPTVSISTTPRNSNSGQPLATTKTSPPV 396
AS++A ++PT + STTP S++G T K V
Sbjct 537 ASATATIKPTASTPASTTPTASSTGDTKYTVKAGESV 573
Score = 21.9 bits (45), Expect = 1.5
Identities = 10/27 (37%), Positives = 14/27 (52%), Gaps = 0/27 (0%)
Query 383 SGQPLATTKTSPPVMTASASRPTVSST 409
S + AT P T +++ PT SST
Sbjct 534 SSKASATATIKPTASTPASTTPTASST 560
>Q49UX4 N-acetylmuramoyl-L-alanine amidase sle1 [Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM
20229 / NCIMB 8711 / NCTC 7292 / S-41)]
Length=327
Score = 106 bits (264), Expect = 5e-28
Identities = 63/178 (35%), Positives = 105/178 (59%), Gaps = 13/178 (7%)
Query 844 YVVQSGDSLNAVASKFNLQLDVLADLNGLNRNAGLRVGQKLKLTGEPSAHSTAKSKAKDN 903
Y V+SGDSL ++A+K+N+ + L LN L N + Q LK++G ST+ S + +
Sbjct 29 YKVKSGDSLWSIANKYNMSVAKLKSLNNLTSNV-IFPNQSLKVSG-----STSSSTSSNT 82
Query 904 EIPDVYTVKSGDTLGNIANRYSLQVDDLMQINGLRHSTLQAGQKIKLTGDIEKVAASKTD 963
YTVKSGDTL IA +Y +M +NGL + + GQK+K++G A+ +
Sbjct 83 STGSTYTVKSGDTLSGIAAKYGTTYQKIMSLNGLSNFNIYPGQKLKVSG------AASSS 136
Query 964 SKSKTVSKSSGKTEDYTVKAGESLHSISSRLGLSSKELADLNDLSARASLQRGQTIQI 1021
S + + + SSG T YTVK+G+SL +I+++ G + +++ LN L+ ++ GQ +++
Sbjct 137 SSNTSGNTSSGSTTTYTVKSGDSLSAIAAKYGTTYQKIMSLNGLT-NFNIYPGQKLKV 193
Score = 98.2 bits (243), Expect = 3e-25
Identities = 68/194 (35%), Positives = 105/194 (54%), Gaps = 17/194 (9%)
Query 792 YKVQRGETLSSIATASKISLSELLELNNLKSATGLRAGQTIKIPAGSTIPDE-------- 843
YKV+ G++L SIA +S+++L LNNL S + Q++K+ +GST
Sbjct 29 YKVKSGDSLWSIANKYNMSVAKLKSLNNLTSNV-IFPNQSLKV-SGSTSSSTSSNTSTGS 86
Query 844 -YVVQSGDSLNAVASKFNLQLDVLADLNGLNRNAGLRVGQKLKLTGEPSAHSTAKSKAKD 902
Y V+SGD+L+ +A+K+ + LNGL+ N + GQKLK++G S+ S+ S
Sbjct 87 TYTVKSGDTLSGIAAKYGTTYQKIMSLNGLS-NFNIYPGQKLKVSGAASSSSSNTSGNTS 145
Query 903 NEIPDVYTVKSGDTLGNIANRYSLQVDDLMQINGLRHSTLQAGQKIKLTGDIEKVAASKT 962
+ YTVKSGD+L IA +Y +M +NGL + + GQK+K++G AS
Sbjct 146 SGSTTTYTVKSGDSLSAIAAKYGTTYQKIMSLNGLTNFNIYPGQKLKVSG-----KASTG 200
Query 963 DSKSKTVSKSSGKT 976
S S + + KT
Sbjct 201 GSGSSSTGSAGYKT 214
Score = 82.0 bits (201), Expect = 8e-20
Identities = 51/164 (31%), Positives = 87/164 (53%), Gaps = 28/164 (17%)
Query 909 YTVKSGDTLGNIANRYSLQVDDLMQINGLRHSTLQAGQKIKLTGDIEKVAASKTDSKSKT 968
Y VKSGD+L +IAN+Y++ V L +N L + + Q +K++G +S T
Sbjct 29 YKVKSGDSLWSIANKYNMSVAKLKSLNNLTSNVIFPNQSLKVSGSTSSSTSSNT------ 82
Query 969 VSKSSGKTEDYTVKAGESLHSISSRLGLSSKELADLNDLSARASLQRGQTIQI------- 1021
S+G T YTVK+G++L I+++ G + +++ LN LS ++ GQ +++
Sbjct 83 ---STGST--YTVKSGDTLSGIAAKYGTTYQKIMSLNGLS-NFNIYPGQKLKVSGAASSS 136
Query 1022 ---------PKTVTEYKIKRGDTLNGLASKYGMALAELADLNGL 1056
+ T Y +K GD+L+ +A+KYG ++ LNGL
Sbjct 137 SSNTSGNTSSGSTTTYTVKSGDSLSAIAAKYGTTYQKIMSLNGL 180
Score = 80.5 bits (197), Expect = 3e-19
Identities = 57/178 (32%), Positives = 97/178 (54%), Gaps = 11/178 (6%)
Query 587 STYTVVSGDTLAIIAMKNGVSWRDIANWNQIDPNRTLYAGTSLYLYDAKPQIDSPAKSDT 646
+TY V SGD+L IA K +S + + N + N ++ SL + + S + + +
Sbjct 27 TTYKVKSGDSLWSIANKYNMSVAKLKSLNNLTSN-VIFPNQSLKVSGSTSS--STSSNTS 83
Query 647 TPDSYTVKANDSLTGVAEQFGLTVKQLADLNDLNVTSGLFVGQKLTLKDKKTSSTTSARH 706
T +YTVK+ D+L+G+A ++G T +++ LN L+ ++ GQKL + +SS+++
Sbjct 84 TGSTYTVKSGDTLSGIAAKYGTTYQKIMSLNGLS-NFNIYPGQKLKVSGAASSSSSNTSG 142
Query 707 TAESKTAKQVPTKLYTVRRGEYLKQIAERYGLSNQELADLTTGLNAGSNLYIGQKINV 764
S + T YTV+ G+ L IA +YG + Q++ L GL N+Y GQK+ V
Sbjct 143 NTSSGS-----TTTYTVKSGDSLSAIAAKYGTTYQKIMSL-NGL-TNFNIYPGQKLKV 193
Score = 38.1 bits (87), Expect = 1e-05
Identities = 19/44 (43%), Positives = 29/44 (66%), Gaps = 5/44 (11%)
Query 1026 TEYKIKRGDTLNGLASKYGMALAELADLNGLK-----PSTSLRI 1064
T YK+K GD+L +A+KY M++A+L LN L P+ SL++
Sbjct 27 TTYKVKSGDSLWSIANKYNMSVAKLKSLNNLTSNVIFPNQSLKV 70
Score = 35.4 bits (80), Expect = 8e-05
Identities = 19/46 (41%), Positives = 28/46 (61%), Gaps = 1/46 (2%)
Query 584 GKRSTYTVVSGDTLAIIAMKNGVSWRDIANWNQIDPNRTLYAGTSL 629
G +TYTV SGD+L+ IA K G +++ I + N + N +Y G L
Sbjct 147 GSTTTYTVKSGDSLSAIAAKYGTTYQKIMSLNGL-TNFNIYPGQKL 191
>A0A0H3C9Q9 Cell division protein DipM [Caulobacter vibrioides
(strain NA1000 / CB15N)]
Length=609
Score = 103 bits (257), Expect = 7e-26
Identities = 84/288 (29%), Positives = 139/288 (48%), Gaps = 30/288 (10%)
Query 794 VQRGETLSSIATASKISLSELLELNNLKSATGLRAGQTIKIPAGSTIPDEYVVQSGDSLN 853
V+ G+ L +IA + +EL++LN+L+ L+ GQ IK PA T YVVQ+GD++
Sbjct 125 VESGDALDAIARGMGSTRAELVKLNDLEPPYRLKLGQKIKGPA--TTAKAYVVQTGDTMF 182
Query 854 AVASKFNLQLDVLADLNGLNRNAGLRVGQKLKLTGEPSAHSTAKSKAKDNEIPDVYTVKS 913
A+A +FN+ LA+ N L A ++ GQKL L PD Y K
Sbjct 183 AIAKRFNVTAAALAEENDLKSGAAIKKGQKLLL-------------------PDGYKDKG 223
Query 914 G-DTLGNIANRYSLQVDDLMQINGLRHSTLQAGQKIK-----LTGDIEKVAASKTDSKSK 967
T I + V + A + ++ + + A + T + S
Sbjct 224 PIKTTQVIPGTPATMVAEAEPAPATTRPATPAATPSRPVRQPVSEETSEPATTSTTTLSV 283
Query 968 T--VSKSSGKTEDYTVKAGESLHSISSRLGLSSKELADLNDLSARASLQRGQTIQIPKTV 1025
T V +G + +TVK+G++L +I+ + +S ELA+ N L L+ G I+ P T
Sbjct 284 TGSVVTVAGPRQVHTVKSGDTLTAIARKFDMSVSELAEANKLDTEKPLKLGAKIKGPATT 343
Query 1026 TE-YKIKRGDTLNGLASKYGMALAELADLNGLKPSTSLRIGDVIKVPN 1072
+ Y ++ GDTL +A ++ +++ LA N L+ + SL+ G I +P+
Sbjct 344 QKAYSVQTGDTLGEIAKRFNVSVKALAAENNLRATASLKKGQKIALPD 391
Score = 102 bits (255), Expect = 1e-25
Identities = 93/313 (30%), Positives = 140/313 (45%), Gaps = 41/313 (13%)
Query 579 VVQPKGKRSTYTVVSGDTLAIIAMKNGVSWRDIANWNQIDPNRTLYAGTSLYLYDAKPQI 638
VV+ GK V SGD L IA G + ++ N ++P L G +I
Sbjct 113 VVEVAGKPQVRVVESGDALDAIARGMGSTRAELVKLNDLEPPYRLKLGQ---------KI 163
Query 639 DSPAKSDTTPDSYTVKANDSLTGVAEQFGLTVKQLADLNDLNVTSGLFVGQKLTLKDKKT 698
PA TT +Y V+ D++ +A++F +T LA+ NDL + + GQKL L D
Sbjct 164 KGPA---TTAKAYVVQTGDTMFAIAKRFNVTAAALAEENDLKSGAAIKKGQKLLLPD--- 217
Query 699 SSTTSARHTAESKTAKQVPTKLYTVRRGEYLKQIAERYGLSNQELADLTTGLNAGSNLYI 758
+ KT + +P G +AE E A TT A
Sbjct 218 ----GYKDKGPIKTTQVIP--------GTPATMVAEA------EPAPATTR-PATPAATP 258
Query 759 GQKINVPLHEVGEDDSKLNAKSAKAVPSVKT-----ENYKVQRGETLSSIATASKISLSE 813
+ + P+ E + + + + SV T + + V+ G+TL++IA +S+SE
Sbjct 259 SRPVRQPVSEETSEPATTSTTTLSVTGSVVTVAGPRQVHTVKSGDTLTAIARKFDMSVSE 318
Query 814 LLELNNLKSATGLRAGQTIKIPAGSTIPDEYVVQSGDSLNAVASKFNLQLDVLADLNGLN 873
L E N L + L+ G IK PA T Y VQ+GD+L +A +FN+ + LA N L
Sbjct 319 LAEANKLDTEKPLKLGAKIKGPA--TTQKAYSVQTGDTLGEIAKRFNVSVKALAAENNLR 376
Query 874 RNAGLRVGQKLKL 886
A L+ GQK+ L
Sbjct 377 ATASLKKGQKIAL 389
Score = 80.9 bits (198), Expect = 9e-19
Identities = 97/365 (27%), Positives = 155/365 (42%), Gaps = 46/365 (13%)
Query 351 KPSGNSGLWASSSAPVQPTPTVSISTTPRNSNSGQPLATTKTSP-PVMTASASRPTVSST 409
+P L + PVQ P ++ + P + P++T +P PV+ A+ R V++T
Sbjct 53 QPGEAESLPRPTPIPVQSAPPIAQAELPPPA----PVSTPAPAPQPVLRATPPRTVVTTT 108
Query 410 VSSISSSIRKSATPKGADALAQFAASADIPSAPRIPVAVTPATNVKQVAIEPPISKAERQ 469
V+ + + P+ + S D A + T A VK +EPP Q
Sbjct 109 VTG--PVVEVAGKPQ-----VRVVESGDALDAIARGMGSTRAELVKLNDLEPPYRLKLGQ 161
Query 470 DIVAVIRAEGEKESVKQALEPQPTQAEKDQVLA---------ELSAIVPKGTQIVDPLDG 520
I A K V Q + A++ V A + A + KG +++ P DG
Sbjct 162 KIKGP--ATTAKAYVVQTGDTMFAIAKRFNVTAAALAEENDLKSGAAIKKGQKLLLP-DG 218
Query 521 KIKLTAIQTSQSVADQQGKEVTKEFAYPKALADNVSASD------QDVQRNSNKPYIKTD 574
I+T+Q + V + P A+ Q V +++P +
Sbjct 219 YKDKGPIKTTQVIPGTPATMVAEAEPAPATTRPATPAATPSRPVRQPVSEETSEPATTST 278
Query 575 TDIVV----VQPKGKRSTYTVVSGDTLAIIAMKNGVSWRDIANWNQIDPNRTLYAGTSLY 630
T + V V G R +TV SGDTL IA K +S ++A N++D + L G
Sbjct 279 TTLSVTGSVVTVAGPRQVHTVKSGDTLTAIARKFDMSVSELAEANKLDTEKPLKLGA--- 335
Query 631 LYDAKPQIDSPAKSDTTPDSYTVKANDSLTGVAEQFGLTVKQLADLNDLNVTSGLFVGQK 690
+I PA TT +Y+V+ D+L +A++F ++VK LA N+L T+ L GQK
Sbjct 336 ------KIKGPA---TTQKAYSVQTGDTLGEIAKRFNVSVKALAAENNLRATASLKKGQK 386
Query 691 LTLKD 695
+ L D
Sbjct 387 IALPD 391
Score = 68.2 bits (165), Expect = 8e-15
Identities = 62/236 (26%), Positives = 105/236 (44%), Gaps = 20/236 (8%)
Query 841 PDEYVVQSGDSLNAVASKFNLQLDVLADLNGLNRNAGLRVGQKLKLTGEPSAHSTAKSKA 900
P VV+SGD+L+A+A L LN L L++GQK+K +TAK+
Sbjct 120 PQVRVVESGDALDAIARGMGSTRAELVKLNDLEPPYRLKLGQKIK-----GPATTAKA-- 172
Query 901 KDNEIPDVYTVKSGDTLGNIANRYSLQVDDLMQINGLRH-STLQAGQKIKLTGDIEKVAA 959
Y V++GDT+ IA R+++ L + N L+ + ++ GQK+ L +
Sbjct 173 --------YVVQTGDTMFAIAKRFNVTAAALAEENDLKSGAAIKKGQKLLLPDGYKDKGP 224
Query 960 SKTDSK---SKTVSKSSGKTEDYTVKAGESLHSISSRLGLS-SKELADLNDLSARASLQR 1015
KT + + + T + + S + S+E ++ S
Sbjct 225 IKTTQVIPGTPATMVAEAEPAPATTRPATPAATPSRPVRQPVSEETSEPATTSTTTLSVT 284
Query 1016 GQTIQIPKTVTEYKIKRGDTLNGLASKYGMALAELADLNGLKPSTSLRIGDVIKVP 1071
G + + + +K GDTL +A K+ M+++ELA+ N L L++G IK P
Sbjct 285 GSVVTVAGPRQVHTVKSGDTLTAIARKFDMSVSELAEANKLDTEKPLKLGAKIKGP 340
Score = 63.5 bits (153), Expect = 2e-13
Identities = 97/424 (23%), Positives = 159/424 (38%), Gaps = 79/424 (19%)
Query 420 SATPKGADALAQFAASADIPSAPRIPVAVTPATNVKQVAIEPPISKAERQDIVAVIRAEG 479
+A P G AQ + +P IPV PPI++AE V
Sbjct 42 AAPPPGETIQAQPGEAESLPRPTPIPVQSA-----------PPIAQAELPPPAPVSTPAP 90
Query 480 EKESVKQALEPQPTQAEKDQVLAELSAIVPKGTQIVDPLDGKIKLTAIQTSQSVADQQGK 539
+ V +A P+ + + T V + GK ++ +++ ++
Sbjct 91 APQPVLRATPPR-------------TVVTTTVTGPVVEVAGKPQVRVVESGDAL------ 131
Query 540 EVTKEFAYPKALADNVSASDQD-VQRNSNKPYIKTDTDIVVVQPKGKRSTYTVVSGDTLA 598
A+A + ++ + V+ N +P + + P Y V +GDT+
Sbjct 132 ---------DAIARGMGSTRAELVKLNDLEPPYRLKLGQKIKGPATTAKAYVVQTGDTMF 182
Query 599 IIAMKNGVSWRDIANWNQIDPNRTLYAGTSLYL---YDAKPQIDSPAKSDTTPDSYTVKA 655
IA + V+ +A N + + G L L Y K I + TP
Sbjct 183 AIAKRFNVTAAALAEENDLKSGAAIKKGQKLLLPDGYKDKGPIKTTQVIPGTP------- 235
Query 656 NDSLTGVAEQFGLTVKQLADLNDLNVTSGLFVGQKLT--LKDKKTSSTTSARHTAESKTA 713
++ AE T + T V Q ++ + T+STT+ T T
Sbjct 236 -ATMVAEAEPAPATTRPATPA----ATPSRPVRQPVSEETSEPATTSTTTLSVTGSVVTV 290
Query 714 KQVPTKLYTVRRGEYLKQIAERYGLSNQELADLTTGLNAGSNLYIGQKINVPLHEVGEDD 773
P +++TV+ G+ L IA ++ +S ELA+ L+ L +G KI P
Sbjct 291 AG-PRQVHTVKSGDTLTAIARKFDMSVSELAE-ANKLDTEKPLKLGAKIKGP-------- 340
Query 774 SKLNAKSAKAVPSVKTENYKVQRGETLSSIATASKISLSELLELNNLKSATGLRAGQTIK 833
A + KA Y VQ G+TL IA +S+ L NNL++ L+ GQ I
Sbjct 341 ----ATTQKA--------YSVQTGDTLGEIAKRFNVSVKALAAENNLRATASLKKGQKIA 388
Query 834 IPAG 837
+P G
Sbjct 389 LPDG 392
Score = 60.5 bits (145), Expect = 2e-12
Identities = 34/112 (30%), Positives = 64/112 (57%), Gaps = 1/112 (1%)
Query 962 TDSKSKTVSKSSGKTEDYTVKAGESLHSISSRLGLSSKELADLNDLSARASLQRGQTIQI 1021
T + + V + +GK + V++G++L +I+ +G + EL LNDL L+ GQ I+
Sbjct 106 TTTVTGPVVEVAGKPQVRVVESGDALDAIARGMGSTRAELVKLNDLEPPYRLKLGQKIKG 165
Query 1022 PKTVTE-YKIKRGDTLNGLASKYGMALAELADLNGLKPSTSLRIGDVIKVPN 1072
P T + Y ++ GDT+ +A ++ + A LA+ N LK +++ G + +P+
Sbjct 166 PATTAKAYVVQTGDTMFAIAKRFNVTAAALAEENDLKSGAAIKKGQKLLLPD 217
Score = 32.3 bits (72), Expect = 0.001
Identities = 43/176 (24%), Positives = 70/176 (40%), Gaps = 30/176 (17%)
Query 269 IKNP----KAYGV----SLPPIANRPHFREVTLNSAVDLNQISSVTGLSRTELYALNPGY 320
IK P KAY V +L IA R + V++ + N + + L + + AL G+
Sbjct 337 IKGPATTQKAYSVQTGDTLGEIAKRFN---VSVKALAAENNLRATASLKKGQKIALPDGF 393
Query 321 R--GDVIDPASPMRILIPADLSPSIDNKLKALKPSGNSGLWASSSAPVQPTPTVSISTTP 378
R G + + PA+ +D+ A++S P P P P
Sbjct 394 RDKGPIRTTTTTRPATPPANTYARVDSSA------------AAASTPSSPVPYTPSGAAP 441
Query 379 RNSN--SGQPLATTKTSPPVMTASASRPTVSSTVSSISSSIRKSATPKGADALAQF 432
R S + QP+ +S + +A+ PT + I+S K A P D ++ F
Sbjct 442 RPSAPVAAQPITPPPSSGRTIIETAAAPTEAEI---IASGKGKFAWPLRGDIISSF 494
Score = 28.1 bits (61), Expect = 0.019
Identities = 25/91 (27%), Positives = 38/91 (42%), Gaps = 22/91 (24%)
Query 582 PKGKRSTYTVVSGDTLAIIAMKNGVSWRDIANWNQIDPNRTLYAGTSLYLYD-------- 633
P + Y+V +GDTL IA + VS + +A N + +L G + L D
Sbjct 340 PATTQKAYSVQTGDTLGEIAKRFNVSVKALAAENNLRATASLKKGQKIALPDGFRDKGPI 399
Query 634 --------AKP------QIDSPAKSDTTPDS 650
A P ++DS A + +TP S
Sbjct 400 RTTTTTRPATPPANTYARVDSSAAAASTPSS 430
Score = 27.7 bits (60), Expect = 0.025
Identities = 34/146 (23%), Positives = 56/146 (38%), Gaps = 21/146 (14%)
Query 382 NSGQPLATTKTSPPVMTASASRPTVSSTVSSISSSIRKSATPKGADALAQFAASADIPSA 441
+ G TT T P A+ SS ++ + S TP GA A PSA
Sbjct 395 DKGPIRTTTTTRPATPPANTYARVDSSAAAASTPSSPVPYTPSGA---------APRPSA 445
Query 442 PRIPVAVTPATNVKQVAIEPPISKAERQDIVAVIRAEGE-----KESVKQALEPQPTQAE 496
P +TP + + IE + E + I + +G+ + + + + T
Sbjct 446 PVAAQPITPPPSSGRTIIETAAAPTEAEIIAS---GKGKFAWPLRGDIISSFGVKGTGQR 502
Query 497 KDQVLAELSAIVPKGTQIVDPLDGKI 522
D L+ P+GT ++ DG+I
Sbjct 503 ND----GLNIRAPQGTPVLSSADGEI 524
>P54421 Probable peptidoglycan endopeptidase LytE [Bacillus subtilis
(strain 168)]
Length=334
Score = 100 bits (248), Expect = 7e-26
Identities = 68/199 (34%), Positives = 106/199 (53%), Gaps = 15/199 (8%)
Query 786 SVKTENYKVQRGETLSSIATASKISLSELLELNNLKSATGLRAGQTIKIPAGSTIPDE-- 843
+ ++ KV++G+TL ++ ++S++ N+L+S + GQT+ I ST
Sbjct 22 AASAQSIKVKKGDTLWDLSRKYDTTISKIKSENHLRSDI-IYVGQTLSINGKSTSSKSSS 80
Query 844 -------YVVQSGDSLNAVASKFNLQLDVLADLNGLNRNAGLRVGQKLKLTGEPSAHSTA 896
Y V+SGDSL ++ K+ + ++ L LNGL + LRVGQ LKL G S+ S++
Sbjct 81 SSSSSSTYKVKSGDSLWKISKKYGMTINELKKLNGLKSDL-LRVGQVLKLKGSTSSSSSS 139
Query 897 KSKAKDNEIPDVYTVKSGDTLGNIANRYSLQVDDLMQINGLRHSTLQAGQKIKLTG---D 953
SK + Y VKSGD+L IA++Y V L +NGL+ + Q +K+ G
Sbjct 140 SSKVSSSST-STYKVKSGDSLSKIASKYGTTVSKLKSLNGLKSDVIYVNQVLKVKGTSTS 198
Query 954 IEKVAASKTDSKSKTVSKS 972
K A+S + S SKT S S
Sbjct 199 SSKPASSSSSSSSKTSSTS 217
Score = 89.0 bits (219), Expect = 4e-22
Identities = 60/190 (32%), Positives = 101/190 (53%), Gaps = 14/190 (7%)
Query 820 LKSATGLRAGQTIKIPAGSTIPDEYVVQSGDSLNAVASKFNLQLDVLADLNGLNRNAGLR 879
+ + T + G T+ AG+ V+ GD+L ++ K++ + + N L R+ +
Sbjct 6 ITATTAVVLGSTLF--AGAASAQSIKVKKGDTLWDLSRKYDTTISKIKSENHL-RSDIIY 62
Query 880 VGQKLKLTGEPSAHSTAKSKAKDNEIPDVYTVKSGDTLGNIANRYSLQVDDLMQINGLRH 939
VGQ L + G+ ST+ + + Y VKSGD+L I+ +Y + +++L ++NGL+
Sbjct 63 VGQTLSINGK----STSSKSSSSSSSSSTYKVKSGDSLWKISKKYGMTINELKKLNGLKS 118
Query 940 STLQAGQKIKLTGDIEKVAASKTDSKSKTVSKSSGKTEDYTVKAGESLHSISSRLGLSSK 999
L+ GQ +KL G + S + S S VS SS T Y VK+G+SL I+S+ G +
Sbjct 119 DLLRVGQVLKLKG-----STSSSSSSSSKVSSSS--TSTYKVKSGDSLSKIASKYGTTVS 171
Query 1000 ELADLNDLSA 1009
+L LN L +
Sbjct 172 KLKSLNGLKS 181
Score = 86.7 bits (213), Expect = 2e-21
Identities = 58/175 (33%), Positives = 90/175 (51%), Gaps = 27/175 (15%)
Query 911 VKSGDTLGNIANRYSLQVDDLMQINGLRHSTLQAGQKIKLTGDIEKVAASKTDSKSKTVS 970
VK GDTL +++ +Y + + N LR + GQ + + G T SKS S
Sbjct 30 VKKGDTLWDLSRKYDTTISKIKSENHLRSDIIYVGQTLSING-------KSTSSKS---S 79
Query 971 KSSGKTEDYTVKAGESLHSISSRLGLSSKELADLNDLSARASLQRGQTIQIP-------- 1022
SS + Y VK+G+SL IS + G++ EL LN L + L+ GQ +++
Sbjct 80 SSSSSSSTYKVKSGDSLWKISKKYGMTINELKKLNGLKSDL-LRVGQVLKLKGSTSSSSS 138
Query 1023 -------KTVTEYKIKRGDTLNGLASKYGMALAELADLNGLKPSTSLRIGDVIKV 1070
+ + YK+K GD+L+ +ASKYG +++L LNGLK S + + V+KV
Sbjct 139 SSSKVSSSSTSTYKVKSGDSLSKIASKYGTTVSKLKSLNGLK-SDVIYVNQVLKV 192
Score = 75.1 bits (183), Expect = 2e-17
Identities = 59/208 (28%), Positives = 106/208 (51%), Gaps = 19/208 (9%)
Query 650 SYTVKANDSLTGVAEQFGLTVKQLADLNDLNVTSGLFVGQKLTLKDKKTSSTTSARHTAE 709
S VK D+L ++ ++ T+ ++ N L + ++VGQ L++ K TSS +S+ ++
Sbjct 27 SIKVKKGDTLWDLSRKYDTTISKIKSENHLR-SDIIYVGQTLSINGKSTSSKSSSSSSSS 85
Query 710 SKTAKQVPTKLYTVRRGEYLKQIAERYGLSNQELADLTTGLNAGSNLYIGQKINVPLHEV 769
S Y V+ G+ L +I+++YG++ EL L GL + L +GQ + +
Sbjct 86 ST---------YKVKSGDSLWKISKKYGMTINELKKLN-GLKSDL-LRVGQVLKL----- 129
Query 770 GEDDSKLNAKSAKAVPSVKTENYKVQRGETLSSIATASKISLSELLELNNLKSATGLRAG 829
+ + ++ S+ V S T YKV+ G++LS IA+ ++S+L LN LKS +
Sbjct 130 -KGSTSSSSSSSSKVSSSSTSTYKVKSGDSLSKIASKYGTTVSKLKSLNGLKSDV-IYVN 187
Query 830 QTIKIPAGSTIPDEYVVQSGDSLNAVAS 857
Q +K+ ST + S S + +S
Sbjct 188 QVLKVKGTSTSSSKPASSSSSSSSKTSS 215
Score = 70.1 bits (170), Expect = 7e-16
Identities = 59/211 (28%), Positives = 105/211 (50%), Gaps = 15/211 (7%)
Query 591 VVSGDTLAIIAMKNGVSWRDIANWNQIDPNRTLYAGTSLYLYDAKPQIDSPAKSDTTPDS 650
V GDTL ++ K + I + N + + +Y G +L + + K + S ++ +
Sbjct 30 VKKGDTLWDLSRKYDTTISKIKSENHLRSD-IIYVGQTLSI-NGKSTSSKSSSSSSSSST 87
Query 651 YTVKANDSLTGVAEQFGLTVKQLADLNDLNVTSGLFVGQKLTLKDKKTSSTTSARHTAES 710
Y VK+ DSL +++++G+T+ +L LN L + L VGQ L LK +SS++S+ + S
Sbjct 88 YKVKSGDSLWKISKKYGMTINELKKLNGLK-SDLLRVGQVLKLKGSTSSSSSSSSKVSSS 146
Query 711 KTAKQVPTKLYTVRRGEYLKQIAERYGLSNQELADLTTGLNAGSNLYIGQKINVPLHEVG 770
T+ Y V+ G+ L +IA +YG + +L L GL + +Y+ Q + V G
Sbjct 147 STS------TYKVKSGDSLSKIASKYGTTVSKLKSL-NGLKS-DVIYVNQVLKVK----G 194
Query 771 EDDSKLNAKSAKAVPSVKTENYKVQRGETLS 801
S S+ + S KT + + + +S
Sbjct 195 TSTSSSKPASSSSSSSSKTSSTSLNVSKLVS 225
Score = 57.0 bits (136), Expect = 1e-11
Identities = 41/128 (32%), Positives = 68/128 (53%), Gaps = 4/128 (3%)
Query 587 STYTVVSGDTLAIIAMKNGVSWRDIANWNQIDPNRTLYAGTSLYLYDAKPQIDSPAK--S 644
STY V SGD+L I+ K G++ ++ N + + L G L L + S + S
Sbjct 86 STYKVKSGDSLWKISKKYGMTINELKKLNGLKSD-LLRVGQVLKLKGSTSSSSSSSSKVS 144
Query 645 DTTPDSYTVKANDSLTGVAEQFGLTVKQLADLNDLNVTSGLFVGQKLTLKDKKTSSTTSA 704
++ +Y VK+ DSL+ +A ++G TV +L LN L + ++V Q L +K TSS+ A
Sbjct 145 SSSTSTYKVKSGDSLSKIASKYGTTVSKLKSLNGLK-SDVIYVNQVLKVKGTSTSSSKPA 203
Query 705 RHTAESKT 712
++ S +
Sbjct 204 SSSSSSSS 211
Score = 30.4 bits (67), Expect = 0.003
Identities = 20/66 (30%), Positives = 31/66 (47%), Gaps = 1/66 (2%)
Query 587 STYTVVSGDTLAIIAMKNGVSWRDIANWNQIDPNRTLYAGTSLYLYDAKPQIDSPAKSDT 646
STY V SGD+L+ IA K G + + + N + + +Y L + PA S +
Sbjct 149 STYKVKSGDSLSKIASKYGTTVSKLKSLNGLKSD-VIYVNQVLKVKGTSTSSSKPASSSS 207
Query 647 TPDSYT 652
+ S T
Sbjct 208 SSSSKT 213
Score = 27.7 bits (60), Expect = 0.022
Identities = 13/42 (31%), Positives = 25/42 (60%), Gaps = 1/42 (2%)
Query 1029 KIKRGDTLNGLASKYGMALAELADLNGLKPSTSLRIGDVIKV 1070
K+K+GDTL L+ KY ++++ N L+ S + +G + +
Sbjct 29 KVKKGDTLWDLSRKYDTTISKIKSENHLR-SDIIYVGQTLSI 69
Score = 22.7 bits (47), Expect = 0.78
Identities = 12/39 (31%), Positives = 21/39 (54%), Gaps = 0/39 (0%)
Query 396 VMTASASRPTVSSTVSSISSSIRKSATPKGADALAQFAA 434
V+ S + SS+ S +SSS + K D+L++ A+
Sbjct 126 VLKLKGSTSSSSSSSSKVSSSSTSTYKVKSGDSLSKIAS 164
>Q8CMN2 N-acetylmuramoyl-L-alanine amidase sle1 [Staphylococcus
epidermidis (strain ATCC 12228 / FDA PCI 1200)]
Length=324
Score = 98.2 bits (243), Expect = 3e-25
Identities = 61/179 (34%), Positives = 101/179 (56%), Gaps = 16/179 (9%)
Query 844 YVVQSGDSLNAVASKFNLQLDVLADLNGLNRNAGLRVGQKLKLTGEPSAHSTAKSKAKDN 903
+ V+SG+S+ +++ K+ + + L LNGL N + Q LK++G + S+A
Sbjct 29 HTVKSGESVWSISHKYGISIAKLKSLNGLTSNL-IFPNQVLKVSG-------SSSRATST 80
Query 904 EIPDVYTVKSGDTLGNIANRYSLQVDDLMQINGLRHSTLQAGQKIKLTGDIEKVAASKTD 963
VYTVK+GD+L +IA +Y +MQ+NGL + + GQK+K++G T
Sbjct 81 NSGTVYTVKAGDSLSSIAAKYGTTYQKIMQLNGLNNYLIFPGQKLKVSG-------KATS 133
Query 964 SKSKTVSKSSGKTEDYTVKAGESLHSISSRLGLSSKELADLNDLSARASLQRGQTIQIP 1022
S S SSG+T YTVK G+SL +I+S+ G + +++ LN L+ + GQ +++P
Sbjct 134 SSRAKASGSSGRTATYTVKYGDSLSAIASKYGTTYQKIMQLNGLT-NFFIYPGQKLKVP 191
Score = 90.9 bits (224), Expect = 8e-23
Identities = 62/189 (33%), Positives = 102/189 (54%), Gaps = 16/189 (8%)
Query 792 YKVQRGETLSSIATASKISLSELLELNNLKSATGLRAGQTIKIPAGSTIPDE------YV 845
+ V+ GE++ SI+ IS+++L LN L S + Q +K+ S+ Y
Sbjct 29 HTVKSGESVWSISHKYGISIAKLKSLNGLTSNL-IFPNQVLKVSGSSSRATSTNSGTVYT 87
Query 846 VQSGDSLNAVASKFNLQLDVLADLNGLNRNAGLRVGQKLKLTGEPSAHSTAKSKAKDNEI 905
V++GDSL+++A+K+ + LNGLN N + GQKLK++G+ ++ S AK+
Sbjct 88 VKAGDSLSSIAAKYGTTYQKIMQLNGLN-NYLIFPGQKLKVSGKATSSSRAKASGSSGRT 146
Query 906 PDVYTVKSGDTLGNIANRYSLQVDDLMQINGLRHSTLQAGQKIKLTGDIEKVAASKTDSK 965
YTVK GD+L IA++Y +MQ+NGL + + GQK+K+ G + S
Sbjct 147 A-TYTVKYGDSLSAIASKYGTTYQKIMQLNGLTNFFIYPGQKLKVPG-------GSSSSS 198
Query 966 SKTVSKSSG 974
S ++S+G
Sbjct 199 SSNNTRSNG 207
Score = 80.5 bits (197), Expect = 2e-19
Identities = 62/186 (33%), Positives = 96/186 (52%), Gaps = 28/186 (15%)
Query 587 STYTVVSGDTLAIIAMKNGVSWRDIANWNQID-----PNRTLYAGTSLYLYDAKPQIDSP 641
+T+TV SG+++ I+ K G+S + + N + PN+ L S S
Sbjct 27 TTHTVKSGESVWSISHKYGISIAKLKSLNGLTSNLIFPNQVLKVSGS----------SSR 76
Query 642 AKSDTTPDSYTVKANDSLTGVAEQFGLTVKQLADLNDLNVTSGLFVGQKLTLKDKKTSST 701
A S + YTVKA DSL+ +A ++G T +++ LN LN +F GQKL + K TSS+
Sbjct 77 ATSTNSGTVYTVKAGDSLSSIAAKYGTTYQKIMQLNGLN-NYLIFPGQKLKVSGKATSSS 135
Query 702 TSARHTAESKTAKQVPTKLYTVRRGEYLKQIAERYGLSNQELADLTTGLNAGSNLYI--G 759
+ + +TA YTV+ G+ L IA +YG + Q++ LN +N +I G
Sbjct 136 RAKASGSSGRTA------TYTVKYGDSLSAIASKYGTTYQKIMQ----LNGLTNFFIYPG 185
Query 760 QKINVP 765
QK+ VP
Sbjct 186 QKLKVP 191
Score = 79.0 bits (193), Expect = 8e-19
Identities = 54/178 (30%), Positives = 94/178 (53%), Gaps = 30/178 (17%)
Query 909 YTVKSGDTLGNIANRYSLQVDDLMQINGLRHSTLQAGQKIKLTGDIEKVAASKTDSKSKT 968
+TVKSG+++ +I+++Y + + L +NGL + + Q +K++G S S+
Sbjct 29 HTVKSGESVWSISHKYGISIAKLKSLNGLTSNLIFPNQVLKVSG-----------SSSRA 77
Query 969 VSKSSGKTEDYTVKAGESLHSISSRLGLSSKELADLNDLSARASLQRGQTIQIPKTVTE- 1027
S +SG YTVKAG+SL SI+++ G + +++ LN L+ + GQ +++ T
Sbjct 78 TSTNSGTV--YTVKAGDSLSSIAAKYGTTYQKIMQLNGLN-NYLIFPGQKLKVSGKATSS 134
Query 1028 --------------YKIKRGDTLNGLASKYGMALAELADLNGLKPSTSLRIGDVIKVP 1071
Y +K GD+L+ +ASKYG ++ LNGL + + G +KVP
Sbjct 135 SRAKASGSSGRTATYTVKYGDSLSAIASKYGTTYQKIMQLNGL-TNFFIYPGQKLKVP 191
Score = 68.6 bits (166), Expect = 2e-15
Identities = 60/204 (29%), Positives = 100/204 (49%), Gaps = 29/204 (14%)
Query 707 TAESKTAKQVPTKLYTVRRGEYLKQIAERYGLSNQELADLTTGLNAGSNLYIGQKINVPL 766
+A + T Q T +TV+ GE + I+ +YG+S +L L GL SNL ++
Sbjct 16 SALASTHAQAATT-HTVKSGESVWSISHKYGISIAKLKSLN-GLT--SNLIFPNQV---- 67
Query 767 HEVGEDDSKLNAKSAKAVPSVKTENYKVQRGETLSSIATASKISLSELLELNNLKSATGL 826
K++ S++A + Y V+ G++LSSIA + ++++LN L + +
Sbjct 68 -------LKVSGSSSRATSTNSGTVYTVKAGDSLSSIAAKYGTTYQKIMQLNGLNNYL-I 119
Query 827 RAGQTIKIPAGSTIPDE------------YVVQSGDSLNAVASKFNLQLDVLADLNGLNR 874
GQ +K+ +T Y V+ GDSL+A+ASK+ + LNGL
Sbjct 120 FPGQKLKVSGKATSSSRAKASGSSGRTATYTVKYGDSLSAIASKYGTTYQKIMQLNGLT- 178
Query 875 NAGLRVGQKLKLTGEPSAHSTAKS 898
N + GQKLK+ G S+ S++ +
Sbjct 179 NFFIYPGQKLKVPGGSSSSSSSNN 202
Score = 52.4 bits (124), Expect = 4e-10
Identities = 33/104 (32%), Positives = 54/104 (52%), Gaps = 10/104 (10%)
Query 962 TDSKSKTVSKSSGKTEDYTVKAGESLHSISSRLGLSSKELADLNDLSARASLQRGQTIQI 1021
T + S S + +TVK+GES+ SIS + G+S +L LN L++ Q +++
Sbjct 12 TTALSALASTHAQAATTHTVKSGESVWSISHKYGISIAKLKSLNGLTSNLIFPN-QVLKV 70
Query 1022 P---------KTVTEYKIKRGDTLNGLASKYGMALAELADLNGL 1056
+ T Y +K GD+L+ +A+KYG ++ LNGL
Sbjct 71 SGSSSRATSTNSGTVYTVKAGDSLSSIAAKYGTTYQKIMQLNGL 114
Score = 33.5 bits (75), Expect = 3e-04
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 10/73 (14%)
Query 584 GKRSTYTVVSGDTLAIIAMKNGVSWRDIANWNQIDPNRTLYAGTSLYLYDAKPQIDSPAK 643
G+ +TYTV GD+L+ IA K G +++ I N + T+ ++Y + ++ P
Sbjct 144 GRTATYTVKYGDSLSAIASKYGTTYQKIMQLNGL---------TNFFIYPGQ-KLKVPGG 193
Query 644 SDTTPDSYTVKAN 656
S ++ S ++N
Sbjct 194 SSSSSSSNNTRSN 206
>Q5HRU2 N-acetylmuramoyl-L-alanine amidase sle1 [Staphylococcus
epidermidis (strain ATCC 35984 / RP62A)]
Length=324
Score = 98.2 bits (243), Expect = 3e-25
Identities = 61/179 (34%), Positives = 101/179 (56%), Gaps = 16/179 (9%)
Query 844 YVVQSGDSLNAVASKFNLQLDVLADLNGLNRNAGLRVGQKLKLTGEPSAHSTAKSKAKDN 903
+ V+SG+S+ +++ K+ + + L LNGL N + Q LK++G + S+A
Sbjct 29 HTVKSGESVWSISHKYGISIAKLKSLNGLTSNL-IFPNQVLKVSG-------SSSRATST 80
Query 904 EIPDVYTVKSGDTLGNIANRYSLQVDDLMQINGLRHSTLQAGQKIKLTGDIEKVAASKTD 963
VYTVK+GD+L +IA +Y +MQ+NGL + + GQK+K++G T
Sbjct 81 NSGTVYTVKAGDSLSSIAAKYGTTYQKIMQLNGLNNYLIFPGQKLKVSG-------KATS 133
Query 964 SKSKTVSKSSGKTEDYTVKAGESLHSISSRLGLSSKELADLNDLSARASLQRGQTIQIP 1022
S S SSG+T YTVK G+SL +I+S+ G + +++ LN L+ + GQ +++P
Sbjct 134 SSRAKASGSSGRTATYTVKYGDSLSAIASKYGTTYQKIMQLNGLT-NFFIYPGQKLKVP 191
Score = 90.9 bits (224), Expect = 8e-23
Identities = 62/189 (33%), Positives = 102/189 (54%), Gaps = 16/189 (8%)
Query 792 YKVQRGETLSSIATASKISLSELLELNNLKSATGLRAGQTIKIPAGSTIPDE------YV 845
+ V+ GE++ SI+ IS+++L LN L S + Q +K+ S+ Y
Sbjct 29 HTVKSGESVWSISHKYGISIAKLKSLNGLTSNL-IFPNQVLKVSGSSSRATSTNSGTVYT 87
Query 846 VQSGDSLNAVASKFNLQLDVLADLNGLNRNAGLRVGQKLKLTGEPSAHSTAKSKAKDNEI 905
V++GDSL+++A+K+ + LNGLN N + GQKLK++G+ ++ S AK+
Sbjct 88 VKAGDSLSSIAAKYGTTYQKIMQLNGLN-NYLIFPGQKLKVSGKATSSSRAKASGSSGRT 146
Query 906 PDVYTVKSGDTLGNIANRYSLQVDDLMQINGLRHSTLQAGQKIKLTGDIEKVAASKTDSK 965
YTVK GD+L IA++Y +MQ+NGL + + GQK+K+ G + S
Sbjct 147 A-TYTVKYGDSLSAIASKYGTTYQKIMQLNGLTNFFIYPGQKLKVPG-------GSSSSS 198
Query 966 SKTVSKSSG 974
S ++S+G
Sbjct 199 SSNNTRSNG 207
Score = 80.5 bits (197), Expect = 2e-19
Identities = 62/186 (33%), Positives = 96/186 (52%), Gaps = 28/186 (15%)
Query 587 STYTVVSGDTLAIIAMKNGVSWRDIANWNQID-----PNRTLYAGTSLYLYDAKPQIDSP 641
+T+TV SG+++ I+ K G+S + + N + PN+ L S S
Sbjct 27 TTHTVKSGESVWSISHKYGISIAKLKSLNGLTSNLIFPNQVLKVSGS----------SSR 76
Query 642 AKSDTTPDSYTVKANDSLTGVAEQFGLTVKQLADLNDLNVTSGLFVGQKLTLKDKKTSST 701
A S + YTVKA DSL+ +A ++G T +++ LN LN +F GQKL + K TSS+
Sbjct 77 ATSTNSGTVYTVKAGDSLSSIAAKYGTTYQKIMQLNGLN-NYLIFPGQKLKVSGKATSSS 135
Query 702 TSARHTAESKTAKQVPTKLYTVRRGEYLKQIAERYGLSNQELADLTTGLNAGSNLYI--G 759
+ + +TA YTV+ G+ L IA +YG + Q++ LN +N +I G
Sbjct 136 RAKASGSSGRTA------TYTVKYGDSLSAIASKYGTTYQKIMQ----LNGLTNFFIYPG 185
Query 760 QKINVP 765
QK+ VP
Sbjct 186 QKLKVP 191
Score = 79.0 bits (193), Expect = 8e-19
Identities = 54/178 (30%), Positives = 94/178 (53%), Gaps = 30/178 (17%)
Query 909 YTVKSGDTLGNIANRYSLQVDDLMQINGLRHSTLQAGQKIKLTGDIEKVAASKTDSKSKT 968
+TVKSG+++ +I+++Y + + L +NGL + + Q +K++G S S+
Sbjct 29 HTVKSGESVWSISHKYGISIAKLKSLNGLTSNLIFPNQVLKVSG-----------SSSRA 77
Query 969 VSKSSGKTEDYTVKAGESLHSISSRLGLSSKELADLNDLSARASLQRGQTIQIPKTVTE- 1027
S +SG YTVKAG+SL SI+++ G + +++ LN L+ + GQ +++ T
Sbjct 78 TSTNSGTV--YTVKAGDSLSSIAAKYGTTYQKIMQLNGLN-NYLIFPGQKLKVSGKATSS 134
Query 1028 --------------YKIKRGDTLNGLASKYGMALAELADLNGLKPSTSLRIGDVIKVP 1071
Y +K GD+L+ +ASKYG ++ LNGL + + G +KVP
Sbjct 135 SRAKASGSSGRTATYTVKYGDSLSAIASKYGTTYQKIMQLNGL-TNFFIYPGQKLKVP 191
Score = 68.6 bits (166), Expect = 2e-15
Identities = 60/204 (29%), Positives = 100/204 (49%), Gaps = 29/204 (14%)
Query 707 TAESKTAKQVPTKLYTVRRGEYLKQIAERYGLSNQELADLTTGLNAGSNLYIGQKINVPL 766
+A + T Q T +TV+ GE + I+ +YG+S +L L GL SNL ++
Sbjct 16 SALASTHAQAATT-HTVKSGESVWSISHKYGISIAKLKSLN-GLT--SNLIFPNQV---- 67
Query 767 HEVGEDDSKLNAKSAKAVPSVKTENYKVQRGETLSSIATASKISLSELLELNNLKSATGL 826
K++ S++A + Y V+ G++LSSIA + ++++LN L + +
Sbjct 68 -------LKVSGSSSRATSTNSGTVYTVKAGDSLSSIAAKYGTTYQKIMQLNGLNNYL-I 119
Query 827 RAGQTIKIPAGSTIPDE------------YVVQSGDSLNAVASKFNLQLDVLADLNGLNR 874
GQ +K+ +T Y V+ GDSL+A+ASK+ + LNGL
Sbjct 120 FPGQKLKVSGKATSSSRAKASGSSGRTATYTVKYGDSLSAIASKYGTTYQKIMQLNGLT- 178
Query 875 NAGLRVGQKLKLTGEPSAHSTAKS 898
N + GQKLK+ G S+ S++ +
Sbjct 179 NFFIYPGQKLKVPGGSSSSSSSNN 202
Score = 52.4 bits (124), Expect = 4e-10
Identities = 33/104 (32%), Positives = 54/104 (52%), Gaps = 10/104 (10%)
Query 962 TDSKSKTVSKSSGKTEDYTVKAGESLHSISSRLGLSSKELADLNDLSARASLQRGQTIQI 1021
T + S S + +TVK+GES+ SIS + G+S +L LN L++ Q +++
Sbjct 12 TTALSALASTHAQAATTHTVKSGESVWSISHKYGISIAKLKSLNGLTSNLIFPN-QVLKV 70
Query 1022 P---------KTVTEYKIKRGDTLNGLASKYGMALAELADLNGL 1056
+ T Y +K GD+L+ +A+KYG ++ LNGL
Sbjct 71 SGSSSRATSTNSGTVYTVKAGDSLSSIAAKYGTTYQKIMQLNGL 114
Score = 33.5 bits (75), Expect = 3e-04
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 10/73 (14%)
Query 584 GKRSTYTVVSGDTLAIIAMKNGVSWRDIANWNQIDPNRTLYAGTSLYLYDAKPQIDSPAK 643
G+ +TYTV GD+L+ IA K G +++ I N + T+ ++Y + ++ P
Sbjct 144 GRTATYTVKYGDSLSAIASKYGTTYQKIMQLNGL---------TNFFIYPGQ-KLKVPGG 193
Query 644 SDTTPDSYTVKAN 656
S ++ S ++N
Sbjct 194 SSSSSSSNNTRSN 206
>O31852 D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase
CwlS [Bacillus subtilis (strain 168)]
Length=414
Score = 99.0 bits (245), Expect = 5e-25
Identities = 75/246 (30%), Positives = 123/246 (50%), Gaps = 29/246 (12%)
Query 846 VQSGDSLNAVASKFNLQLDVLADLNGLNRNAGLRVGQKLKLTGEPSAHSTAKSKAKDNEI 905
V+SGDSL ++ +++ + L N L ++ L VGQ LK+ +T+ S +
Sbjct 31 VKSGDSLWKLSRQYDTTISALKSENKL-KSTVLYVGQSLKVPESSKKSTTSPSNSSKTS- 88
Query 906 PDVYTVKSGDTLGNIANRYSLQVDDLMQINGLRHSTLQAGQKIKLTGDIEKVAASKTDSK 965
YTV GD+L IA + + V +L +N L ++ GQK+K+ G ++ SK
Sbjct 89 --TYTVAYGDSLWMIAKNHKMSVSELKSLNSLSSDLIRPGQKLKIKG--TSSSSGSNGSK 144
Query 966 SKTVSKSSGKTED-YTVKAGESLHSISSRLGLSSKELADLNDLSARASLQRGQTIQI--- 1021
+ S SSG ++ YTVK G+SL I++ L ++ EL LN L++ +L Q ++I
Sbjct 145 KNSGSNSSGSSKSTYTVKLGDSLWKIANSLNMTVAELKTLNGLTS-DTLYPKQVLKIKGS 203
Query 1022 -----------------PKTVTEYKIKRGDTLNGLASKYGMALAELADLNGLKPSTSLRI 1064
P T YK+K GD+L +A++ G+ + + D N L S L+I
Sbjct 204 SSPKNGNSGSKKPSNSNPSKTTTYKVKAGDSLWKIANRLGVTVQSIRDKNNLS-SDVLQI 262
Query 1065 GDVIKV 1070
G V+ +
Sbjct 263 GQVLTI 268
Score = 92.0 bits (227), Expect = 1e-22
Identities = 88/298 (30%), Positives = 131/298 (44%), Gaps = 40/298 (13%)
Query 693 LKDKKTSSTTSARHTAESKTAKQVPTKLYTVRRGEYLKQIAERYGLSNQELADLTTGLNA 752
+K K + + S A K V+ G+ L +++ +Y + L +
Sbjct 1 MKKKIVAGLAVSAVVGSSMAAAPAEAKTIKVKSGDSLWKLSRQYDTTISALK--SENKLK 58
Query 753 GSNLYIGQKINVPLHEVGEDDSKLNAKSAKAVPSVKTENYKVQRGETLSSIATASKISLS 812
+ LY+GQ + VP + SK + S S KT Y V G++L IA K+S+S
Sbjct 59 STVLYVGQSLKVP------ESSKKSTTSPSN--SSKTSTYTVAYGDSLWMIAKNHKMSVS 110
Query 813 ELLELNNLKSATGLRAGQTIKIPAGSTIPDE------------------YVVQSGDSLNA 854
EL LN+L S +R GQ +KI S+ Y V+ GDSL
Sbjct 111 ELKSLNSLSSDL-IRPGQKLKIKGTSSSSGSNGSKKNSGSNSSGSSKSTYTVKLGDSLWK 169
Query 855 VASKFNLQLDVLADLNGLNRNAGLRVGQKLKLTGEPSA-HSTAKSKAKDNEIPD---VYT 910
+A+ N+ + L LNGL + L Q LK+ G S + + SK N P Y
Sbjct 170 IANSLNMTVAELKTLNGLTSDT-LYPKQVLKIKGSSSPKNGNSGSKKPSNSNPSKTTTYK 228
Query 911 VKSGDTLGNIANRYSLQVDDLMQINGLRHSTLQAGQKIKLTGDIEKVAASKTDSKSKT 968
VK+GD+L IANR + V + N L LQ GQ + ++G ASK++ + T
Sbjct 229 VKAGDSLWKIANRLGVTVQSIRDKNNLSSDVLQIGQVLTISG------ASKSNPSNPT 280
Score = 79.3 bits (194), Expect = 1e-18
Identities = 78/281 (28%), Positives = 136/281 (48%), Gaps = 16/281 (6%)
Query 588 TYTVVSGDTLAIIAMKNGVSWRDIANWNQIDPNRTLYAGTSLYLYDA-KPQIDSPAKSDT 646
T V SGD+L ++ + + + + N++ + LY G SL + ++ K SP+ S
Sbjct 28 TIKVKSGDSLWKLSRQYDTTISALKSENKLK-STVLYVGQSLKVPESSKKSTTSPSNSSK 86
Query 647 TPDSYTVKANDSLTGVAEQFGLTVKQLADLNDLNVTSGLFVGQKLTLKDKKTSSTTSARH 706
T +YTV DSL +A+ ++V +L LN L+ + + GQKL +K +SS ++
Sbjct 87 T-STYTVAYGDSLWMIAKNHKMSVSELKSLNSLS-SDLIRPGQKLKIKGTSSSSGSNGSK 144
Query 707 TAESKTAKQVPTKLYTVRRGEYLKQIAERYGLSNQELADLTTGLNAGSNLYIGQKINVPL 766
+ YTV+ G+ L +IA ++ EL L GL + LY Q + +
Sbjct 145 KNSGSNSSGSSKSTYTVKLGDSLWKIANSLNMTVAELKTL-NGLTS-DTLYPKQVLKIKG 202
Query 767 HEVGEDDSKLNAKSAKAVPSVKTENYKVQRGETLSSIATASKISLSELLELNNLKSATGL 826
++ + + K + + PS KT YKV+ G++L IA +++ + + NNL S L
Sbjct 203 SSSPKNGNSGSKKPSNSNPS-KTTTYKVKAGDSLWKIANRLGVTVQSIRDKNNLSSDV-L 260
Query 827 RAGQTIKI-------PAGSTIPDEYVVQSGDSLNAVASKFN 860
+ GQ + I P+ T P + SG ++ + SK +
Sbjct 261 QIGQVLTISGASKSNPSNPTKPTKPKDNSGSNIQ-IGSKID 300
Score = 61.2 bits (147), Expect = 8e-13
Identities = 60/190 (32%), Positives = 94/190 (49%), Gaps = 17/190 (9%)
Query 585 KRSTYTVVSGDTLAIIAMKNGVSWRDIANWNQ-----IDPNRTL-YAGTSLYLYDAKPQI 638
K STYTV GD+L +IA + +S ++ + N I P + L GTS +
Sbjct 86 KTSTYTVAYGDSLWMIAKNHKMSVSELKSLNSLSSDLIRPGQKLKIKGTSSSSGSNGSKK 145
Query 639 DSPAKSD-TTPDSYTVKANDSLTGVAEQFGLTVKQLADLNDLNVTSGLFVGQKLTLKDKK 697
+S + S ++ +YTVK DSL +A +TV +L LN L + L+ Q L +K
Sbjct 146 NSGSNSSGSSKSTYTVKLGDSLWKIANSLNMTVAELKTLNGL-TSDTLYPKQVLKIKG-- 202
Query 698 TSSTTSARHTAESKTAKQVPTK--LYTVRRGEYLKQIAERYGLSNQELADLTTGLNAGSN 755
SS+ ++ K + P+K Y V+ G+ L +IA R G++ Q + D N S+
Sbjct 203 -SSSPKNGNSGSKKPSNSNPSKTTTYKVKAGDSLWKIANRLGVTVQSIRDKN---NLSSD 258
Query 756 -LYIGQKINV 764
L IGQ + +
Sbjct 259 VLQIGQVLTI 268
Score = 32.3 bits (72), Expect = 9e-04
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query 1022 PKTVTEYKIKRGDTLNGLASKYGMALAELADLNGLKPSTSLRIGDVIKVP 1071
P K+K GD+L L+ +Y ++ L N LK ST L +G +KVP
Sbjct 23 PAEAKTIKVKSGDSLWKLSRQYDTTISALKSENKLK-STVLYVGQSLKVP 71
Score = 21.6 bits (44), Expect = 1.9
Identities = 26/82 (32%), Positives = 32/82 (39%), Gaps = 23/82 (28%)
Query 276 GVSLPPIANRPHFREVTLNSAVDLNQISSVTGLSRTELYALNPGYRGDVIDPASPMRILI 335
G SL IANR VT+ S D N +SS DV+ + I
Sbjct 232 GDSLWKIANR---LGVTVQSIRDKNNLSS------------------DVLQIGQVLTISG 270
Query 336 PADLSPSIDNKLKALKPSGNSG 357
+ +PS N K KP NSG
Sbjct 271 ASKSNPS--NPTKPTKPKDNSG 290
Score = 21.2 bits (43), Expect = 2.4
Identities = 50/222 (23%), Positives = 80/222 (36%), Gaps = 40/222 (18%)
Query 263 LAVAQIIKNPKAYGVSLPPIANRPHFREVTLNSAVDLNQISSVTGLSRTELYALNPGYRG 322
L V Q +K P++ S +N T+ L I+ +S +EL +LN
Sbjct 62 LYVGQSLKVPESSKKSTTSPSNSSKTSTYTVAYGDSLWMIAKNHKMSVSELKSLN-SLSS 120
Query 323 DVIDPASPMRILIPADLSPSIDNKLKALKPSGNSG-----------LW------------ 359
D+I P ++I + S S +K + S S LW
Sbjct 121 DLIRPGQKLKIKGTSSSSGSNGSKKNSGSNSSGSSKSTYTVKLGDSLWKIANSLNMTVAE 180
Query 360 -----ASSSAPVQPTPTVSI--STTPRNSNSGQPLAT----TKTSPPVMTASASRPTVSS 408
+S + P + I S++P+N NSG + +KT+ + A S +++
Sbjct 181 LKTLNGLTSDTLYPKQVLKIKGSSSPKNGNSGSKKPSNSNPSKTTTYKVKAGDSLWKIAN 240
Query 409 TVSSISSSIR-----KSATPKGADALAQFAASADIPSAPRIP 445
+ SIR S + L AS PS P P
Sbjct 241 RLGVTVQSIRDKNNLSSDVLQIGQVLTISGASKSNPSNPTKP 282
>P0C1U7 N-acetylmuramoyl-L-alanine amidase sle1 [Staphylococcus
aureus]
Length=334
Score = 89.7 bits (221), Expect = 2e-22
Identities = 64/205 (31%), Positives = 107/205 (52%), Gaps = 20/205 (10%)
Query 774 SKLNAKSAKAVPSVKTENYKVQRGETLSSIATASKISLSELLELNNLKSATGLRAGQTIK 833
S ++A +A + T + V+ GE++ +I+ IS+++L LNNL S + Q +K
Sbjct 13 SAISAVAATQANAATT--HTVKPGESVWAISNKYGISIAKLKSLNNLTSNL-IFPNQVLK 69
Query 834 IPAGSTIPDE-------------YVVQSGDSLNAVASKFNLQLDVLADLNGLNRNAGLRV 880
+ S Y VQ+GDSL+ +ASK+ + LNGLN N +
Sbjct 70 VSGSSNSTSNSSRPSTNSGGGSYYTVQAGDSLSLIASKYGTTYQNIMRLNGLN-NFFIYP 128
Query 881 GQKLKLTGEPSAHSTAKSKAKDNEIP---DVYTVKSGDTLGNIANRYSLQVDDLMQINGL 937
GQKLK++G S+ + A + ++ + YTV++GD+L IA++Y +M +NGL
Sbjct 129 GQKLKVSGTASSSNAASNSSRPSTNSGGGSYYTVQAGDSLSLIASKYGTTYQKIMSLNGL 188
Query 938 RHSTLQAGQKIKLTGDIEKVAASKT 962
+ + GQK+K+TG+ + S T
Sbjct 189 NNFFIYPGQKLKVTGNASTNSGSAT 213
Score = 89.7 bits (221), Expect = 2e-22
Identities = 52/165 (32%), Positives = 97/165 (59%), Gaps = 4/165 (2%)
Query 844 YVVQSGDSLNAVASKFNLQLDVLADLNGLNRNAGLRVGQKLKLTGEPSAHSTAKSKAKDN 903
+ V+ G+S+ A+++K+ + + L LN L N + Q LK++G ++ S + + ++
Sbjct 29 HTVKPGESVWAISNKYGISIAKLKSLNNLTSNL-IFPNQVLKVSGSSNSTSNSSRPSTNS 87
Query 904 EIPDVYTVKSGDTLGNIANRYSLQVDDLMQINGLRHSTLQAGQKIKLTGDIEKVAASKTD 963
YTV++GD+L IA++Y ++M++NGL + + GQK+K++G ++S
Sbjct 88 GGGSYYTVQAGDSLSLIASKYGTTYQNIMRLNGLNNFFIYPGQKLKVSG---TASSSNAA 144
Query 964 SKSKTVSKSSGKTEDYTVKAGESLHSISSRLGLSSKELADLNDLS 1008
S S S +SG YTV+AG+SL I+S+ G + +++ LN L+
Sbjct 145 SNSSRPSTNSGGGSYYTVQAGDSLSLIASKYGTTYQKIMSLNGLN 189
Score = 72.4 bits (176), Expect = 1e-16
Identities = 48/167 (29%), Positives = 85/167 (51%), Gaps = 26/167 (16%)
Query 909 YTVKSGDTLGNIANRYSLQVDDLMQINGLRHSTLQAGQKIKLTGDIEKVAASKTDSKSKT 968
+TVK G+++ I+N+Y + + L +N L + + Q +K++G +S + S S
Sbjct 29 HTVKPGESVWAISNKYGISIAKLKSLNNLTSNLIFPNQVLKVSG------SSNSTSNSSR 82
Query 969 VSKSSGKTEDYTVKAGESLHSISSRLGLSSKELADLNDLSARASLQRGQTIQIPKTVTE- 1027
S +SG YTV+AG+SL I+S+ G + + + LN L+ + GQ +++ T +
Sbjct 83 PSTNSGGGSYYTVQAGDSLSLIASKYGTTYQNIMRLNGLN-NFFIYPGQKLKVSGTASSS 141
Query 1028 ------------------YKIKRGDTLNGLASKYGMALAELADLNGL 1056
Y ++ GD+L+ +ASKYG ++ LNGL
Sbjct 142 NAASNSSRPSTNSGGGSYYTVQAGDSLSLIASKYGTTYQKIMSLNGL 188
Score = 68.6 bits (166), Expect = 2e-15
Identities = 55/183 (30%), Positives = 93/183 (51%), Gaps = 13/183 (7%)
Query 587 STYTVVSGDTLAIIAMKNGVSWRDIANWNQID-----PNRTLYAGTSLYLYDAKPQIDSP 641
+T+TV G+++ I+ K G+S + + N + PN+ L S ++ P
Sbjct 27 TTHTVKPGESVWAISNKYGISIAKLKSLNNLTSNLIFPNQVLKVSGSS---NSTSNSSRP 83
Query 642 AKSDTTPDSYTVKANDSLTGVAEQFGLTVKQLADLNDLNVTSGLFVGQKLTLKDKKTSST 701
+ + YTV+A DSL+ +A ++G T + + LN LN ++ GQKL K T+S+
Sbjct 84 STNSGGGSYYTVQAGDSLSLIASKYGTTYQNIMRLNGLN-NFFIYPGQKL--KVSGTASS 140
Query 702 TSARHTAESKTAKQVPTKLYTVRRGEYLKQIAERYGLSNQELADLTTGLNAGSNLYIGQK 761
++A + + YTV+ G+ L IA +YG + Q++ L GLN +Y GQK
Sbjct 141 SNAASNSSRPSTNSGGGSYYTVQAGDSLSLIASKYGTTYQKIMSL-NGLN-NFFIYPGQK 198
Query 762 INV 764
+ V
Sbjct 199 LKV 201
Score = 60.8 bits (146), Expect = 7e-13
Identities = 75/281 (27%), Positives = 114/281 (41%), Gaps = 72/281 (26%)
Query 702 TSARHTAESKTAKQVPTKLYTVRRGEYLKQIAERYGLSNQELADLTTGLNAGSNLYIGQK 761
TSA + A T +TV+ GE + I+ +YG+S +L L N SNL +
Sbjct 12 TSAISAVAATQANAATT--HTVKPGESVWAISNKYGISIAKLKSLN---NLTSNLIFPNQ 66
Query 762 INVPLHEVGEDDSKLNAKSAKAVPSVKTENYKVQRGETLSSIATASKISLSELLELNNLK 821
+ L G +S N+ S + S Y VQ G++LS IA+ + ++ LN L
Sbjct 67 V---LKVSGSSNSTSNS-SRPSTNSGGGSYYTVQAGDSLSLIASKYGTTYQNIMRLNGLN 122
Query 822 SATGLRAGQTIKIP---------AGSTIPDE-------YVVQSGDSLNAVASKFNLQLDV 865
+ + GQ +K+ + S+ P Y VQ+GDSL+ +ASK+
Sbjct 123 NFF-IYPGQKLKVSGTASSSNAASNSSRPSTNSGGGSYYTVQAGDSLSLIASKYGTTYQK 181
Query 866 LADLNGLNRNAGLRVGQKLKLTGEPSAHSTAKSKAK------------------------ 901
+ LNGLN N + GQKLK+TG S +S + +
Sbjct 182 IMSLNGLN-NFFIYPGQKLKVTGNASTNSGSATTTNRGYNTPVFSHQNLYTWGQCTYHVF 240
Query 902 --------------------DNEIP-DVYTVKSGDTLGNIA 921
DN D YT+ + T+G+IA
Sbjct 241 NRRAEIGKGISTYWWNANNWDNAAAADGYTIDNRPTVGSIA 281
Score = 59.7 bits (143), Expect = 2e-12
Identities = 41/130 (32%), Positives = 71/130 (55%), Gaps = 8/130 (6%)
Query 584 GKRSTYTVVSGDTLAIIAMKNGVSWRDIANWNQIDPNRTLYAGTSLYLY------DAKPQ 637
G S YTV +GD+L++IA K G ++++I N ++ N +Y G L + +A
Sbjct 88 GGGSYYTVQAGDSLSLIASKYGTTYQNIMRLNGLN-NFFIYPGQKLKVSGTASSSNAASN 146
Query 638 IDSPAKSDTTPDSYTVKANDSLTGVAEQFGLTVKQLADLNDLNVTSGLFVGQKLTLKDKK 697
P+ + YTV+A DSL+ +A ++G T +++ LN LN ++ GQKL +
Sbjct 147 SSRPSTNSGGGSYYTVQAGDSLSLIASKYGTTYQKIMSLNGLN-NFFIYPGQKLKVTGNA 205
Query 698 TSSTTSARHT 707
++++ SA T
Sbjct 206 STNSGSATTT 215
Score = 46.6 bits (109), Expect = 3e-08
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 15/110 (14%)
Query 962 TDSKSKTVSKSSGKTEDYTVKAGESLHSISSRLGLSSKELADLNDLSA---------RAS 1012
T + S + + +TVK GES+ +IS++ G+S +L LN+L++ + S
Sbjct 12 TSAISAVAATQANAATTHTVKPGESVWAISNKYGISIAKLKSLNNLTSNLIFPNQVLKVS 71
Query 1013 LQRGQTIQIPKTVTE------YKIKRGDTLNGLASKYGMALAELADLNGL 1056
T + T Y ++ GD+L+ +ASKYG + LNGL
Sbjct 72 GSSNSTSNSSRPSTNSGGGSYYTVQAGDSLSLIASKYGTTYQNIMRLNGL 121
Score = 19.6 bits (39), Expect = 7.1
Identities = 36/143 (25%), Positives = 61/143 (43%), Gaps = 19/143 (13%)
Query 302 ISSVTGLSRTELYALNPGYRGDVIDPASPMRILIPADLSPSIDNKLKALKPSGNSGLWAS 361
IS+ G+S +L +LN ++I P +++ S S ++ + +PS NSG
Sbjct 40 ISNKYGISIAKLKSLN-NLTSNLIFPNQVLKV------SGSSNSTSNSSRPSTNSG--GG 90
Query 362 SSAPVQPTPTVSI-----STTPRNSNSGQPLATTKTSPPVM-----TASASRPTVSSTVS 411
S VQ ++S+ TT +N L P TAS+S +S+
Sbjct 91 SYYTVQAGDSLSLIASKYGTTYQNIMRLNGLNNFFIYPGQKLKVSGTASSSNAASNSSRP 150
Query 412 SISSSIRKSATPKGADALAQFAA 434
S +S T + D+L+ A+
Sbjct 151 STNSGGGSYYTVQAGDSLSLIAS 173
>Q2G0U9 N-acetylmuramoyl-L-alanine amidase sle1 [Staphylococcus
aureus (strain NCTC 8325 / PS 47)]
Length=334
Score = 89.7 bits (221), Expect = 2e-22
Identities = 64/205 (31%), Positives = 107/205 (52%), Gaps = 20/205 (10%)
Query 774 SKLNAKSAKAVPSVKTENYKVQRGETLSSIATASKISLSELLELNNLKSATGLRAGQTIK 833
S ++A +A + T + V+ GE++ +I+ IS+++L LNNL S + Q +K
Sbjct 13 SAISAVAATQANAATT--HTVKPGESVWAISNKYGISIAKLKSLNNLTSNL-IFPNQVLK 69
Query 834 IPAGSTIPDE-------------YVVQSGDSLNAVASKFNLQLDVLADLNGLNRNAGLRV 880
+ S Y VQ+GDSL+ +ASK+ + LNGLN N +
Sbjct 70 VSGSSNSTSNSSRPSTNSGGGSYYTVQAGDSLSLIASKYGTTYQNIMRLNGLN-NFFIYP 128
Query 881 GQKLKLTGEPSAHSTAKSKAKDNEIP---DVYTVKSGDTLGNIANRYSLQVDDLMQINGL 937
GQKLK++G S+ + A + ++ + YTV++GD+L IA++Y +M +NGL
Sbjct 129 GQKLKVSGTASSSNAASNSSRPSTNSGGGSYYTVQAGDSLSLIASKYGTTYQKIMSLNGL 188
Query 938 RHSTLQAGQKIKLTGDIEKVAASKT 962
+ + GQK+K+TG+ + S T
Sbjct 189 NNFFIYPGQKLKVTGNASTNSGSAT 213
Score = 89.7 bits (221), Expect = 2e-22
Identities = 52/165 (32%), Positives = 97/165 (59%), Gaps = 4/165 (2%)
Query 844 YVVQSGDSLNAVASKFNLQLDVLADLNGLNRNAGLRVGQKLKLTGEPSAHSTAKSKAKDN 903
+ V+ G+S+ A+++K+ + + L LN L N + Q LK++G ++ S + + ++
Sbjct 29 HTVKPGESVWAISNKYGISIAKLKSLNNLTSNL-IFPNQVLKVSGSSNSTSNSSRPSTNS 87
Query 904 EIPDVYTVKSGDTLGNIANRYSLQVDDLMQINGLRHSTLQAGQKIKLTGDIEKVAASKTD 963
YTV++GD+L IA++Y ++M++NGL + + GQK+K++G ++S
Sbjct 88 GGGSYYTVQAGDSLSLIASKYGTTYQNIMRLNGLNNFFIYPGQKLKVSG---TASSSNAA 144
Query 964 SKSKTVSKSSGKTEDYTVKAGESLHSISSRLGLSSKELADLNDLS 1008
S S S +SG YTV+AG+SL I+S+ G + +++ LN L+
Sbjct 145 SNSSRPSTNSGGGSYYTVQAGDSLSLIASKYGTTYQKIMSLNGLN 189
Score = 72.4 bits (176), Expect = 1e-16
Identities = 48/167 (29%), Positives = 85/167 (51%), Gaps = 26/167 (16%)
Query 909 YTVKSGDTLGNIANRYSLQVDDLMQINGLRHSTLQAGQKIKLTGDIEKVAASKTDSKSKT 968
+TVK G+++ I+N+Y + + L +N L + + Q +K++G +S + S S
Sbjct 29 HTVKPGESVWAISNKYGISIAKLKSLNNLTSNLIFPNQVLKVSG------SSNSTSNSSR 82
Query 969 VSKSSGKTEDYTVKAGESLHSISSRLGLSSKELADLNDLSARASLQRGQTIQIPKTVTE- 1027
S +SG YTV+AG+SL I+S+ G + + + LN L+ + GQ +++ T +
Sbjct 83 PSTNSGGGSYYTVQAGDSLSLIASKYGTTYQNIMRLNGLN-NFFIYPGQKLKVSGTASSS 141
Query 1028 ------------------YKIKRGDTLNGLASKYGMALAELADLNGL 1056
Y ++ GD+L+ +ASKYG ++ LNGL
Sbjct 142 NAASNSSRPSTNSGGGSYYTVQAGDSLSLIASKYGTTYQKIMSLNGL 188
Score = 68.6 bits (166), Expect = 2e-15
Identities = 55/183 (30%), Positives = 93/183 (51%), Gaps = 13/183 (7%)
Query 587 STYTVVSGDTLAIIAMKNGVSWRDIANWNQID-----PNRTLYAGTSLYLYDAKPQIDSP 641
+T+TV G+++ I+ K G+S + + N + PN+ L S ++ P
Sbjct 27 TTHTVKPGESVWAISNKYGISIAKLKSLNNLTSNLIFPNQVLKVSGSS---NSTSNSSRP 83
Query 642 AKSDTTPDSYTVKANDSLTGVAEQFGLTVKQLADLNDLNVTSGLFVGQKLTLKDKKTSST 701
+ + YTV+A DSL+ +A ++G T + + LN LN ++ GQKL K T+S+
Sbjct 84 STNSGGGSYYTVQAGDSLSLIASKYGTTYQNIMRLNGLN-NFFIYPGQKL--KVSGTASS 140
Query 702 TSARHTAESKTAKQVPTKLYTVRRGEYLKQIAERYGLSNQELADLTTGLNAGSNLYIGQK 761
++A + + YTV+ G+ L IA +YG + Q++ L GLN +Y GQK
Sbjct 141 SNAASNSSRPSTNSGGGSYYTVQAGDSLSLIASKYGTTYQKIMSL-NGLN-NFFIYPGQK 198
Query 762 INV 764
+ V
Sbjct 199 LKV 201
Score = 60.8 bits (146), Expect = 7e-13
Identities = 75/281 (27%), Positives = 114/281 (41%), Gaps = 72/281 (26%)
Query 702 TSARHTAESKTAKQVPTKLYTVRRGEYLKQIAERYGLSNQELADLTTGLNAGSNLYIGQK 761
TSA + A T +TV+ GE + I+ +YG+S +L L N SNL +
Sbjct 12 TSAISAVAATQANAATT--HTVKPGESVWAISNKYGISIAKLKSLN---NLTSNLIFPNQ 66
Query 762 INVPLHEVGEDDSKLNAKSAKAVPSVKTENYKVQRGETLSSIATASKISLSELLELNNLK 821
+ L G +S N+ S + S Y VQ G++LS IA+ + ++ LN L
Sbjct 67 V---LKVSGSSNSTSNS-SRPSTNSGGGSYYTVQAGDSLSLIASKYGTTYQNIMRLNGLN 122
Query 822 SATGLRAGQTIKIP---------AGSTIPDE-------YVVQSGDSLNAVASKFNLQLDV 865
+ + GQ +K+ + S+ P Y VQ+GDSL+ +ASK+
Sbjct 123 NFF-IYPGQKLKVSGTASSSNAASNSSRPSTNSGGGSYYTVQAGDSLSLIASKYGTTYQK 181
Query 866 LADLNGLNRNAGLRVGQKLKLTGEPSAHSTAKSKAK------------------------ 901
+ LNGLN N + GQKLK+TG S +S + +
Sbjct 182 IMSLNGLN-NFFIYPGQKLKVTGNASTNSGSATTTNRGYNTPVFSHQNLYTWGQCTYHVF 240
Query 902 --------------------DNEIP-DVYTVKSGDTLGNIA 921
DN D YT+ + T+G+IA
Sbjct 241 NRRAEIGKGISTYWWNANNWDNAAAADGYTIDNRPTVGSIA 281
Score = 59.7 bits (143), Expect = 2e-12
Identities = 41/130 (32%), Positives = 71/130 (55%), Gaps = 8/130 (6%)
Query 584 GKRSTYTVVSGDTLAIIAMKNGVSWRDIANWNQIDPNRTLYAGTSLYLY------DAKPQ 637
G S YTV +GD+L++IA K G ++++I N ++ N +Y G L + +A
Sbjct 88 GGGSYYTVQAGDSLSLIASKYGTTYQNIMRLNGLN-NFFIYPGQKLKVSGTASSSNAASN 146
Query 638 IDSPAKSDTTPDSYTVKANDSLTGVAEQFGLTVKQLADLNDLNVTSGLFVGQKLTLKDKK 697
P+ + YTV+A DSL+ +A ++G T +++ LN LN ++ GQKL +
Sbjct 147 SSRPSTNSGGGSYYTVQAGDSLSLIASKYGTTYQKIMSLNGLN-NFFIYPGQKLKVTGNA 205
Query 698 TSSTTSARHT 707
++++ SA T
Sbjct 206 STNSGSATTT 215
Score = 46.6 bits (109), Expect = 3e-08
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 15/110 (14%)
Query 962 TDSKSKTVSKSSGKTEDYTVKAGESLHSISSRLGLSSKELADLNDLSA---------RAS 1012
T + S + + +TVK GES+ +IS++ G+S +L LN+L++ + S
Sbjct 12 TSAISAVAATQANAATTHTVKPGESVWAISNKYGISIAKLKSLNNLTSNLIFPNQVLKVS 71
Query 1013 LQRGQTIQIPKTVTE------YKIKRGDTLNGLASKYGMALAELADLNGL 1056
T + T Y ++ GD+L+ +ASKYG + LNGL
Sbjct 72 GSSNSTSNSSRPSTNSGGGSYYTVQAGDSLSLIASKYGTTYQNIMRLNGL 121
Score = 19.6 bits (39), Expect = 7.1
Identities = 36/143 (25%), Positives = 61/143 (43%), Gaps = 19/143 (13%)
Query 302 ISSVTGLSRTELYALNPGYRGDVIDPASPMRILIPADLSPSIDNKLKALKPSGNSGLWAS 361
IS+ G+S +L +LN ++I P +++ S S ++ + +PS NSG
Sbjct 40 ISNKYGISIAKLKSLN-NLTSNLIFPNQVLKV------SGSSNSTSNSSRPSTNSG--GG 90
Query 362 SSAPVQPTPTVSI-----STTPRNSNSGQPLATTKTSPPVM-----TASASRPTVSSTVS 411
S VQ ++S+ TT +N L P TAS+S +S+
Sbjct 91 SYYTVQAGDSLSLIASKYGTTYQNIMRLNGLNNFFIYPGQKLKVSGTASSSNAASNSSRP 150
Query 412 SISSSIRKSATPKGADALAQFAA 434
S +S T + D+L+ A+
Sbjct 151 STNSGGGSYYTVQAGDSLSLIAS 173
>Q01837 Probable endopeptidase p60 [Listeria ivanovii]
Length=524
Score = 78.6 bits (192), Expect = 4e-18
Identities = 95/430 (22%), Positives = 163/430 (38%), Gaps = 82/430 (19%)
Query 642 AKSDTTPDSYTVKANDSLTGVAEQFGLTVKQLADLNDLNVTSGLFV-GQKLTLKDKKTSS 700
A + + + V+A D+L G+A+ G TV L N N+TS V GQKL + +
Sbjct 21 APTIASASTVVVEAGDTLWGIAQDKGTTVDALKKAN--NLTSDKIVPGQKLQITE----- 73
Query 701 TTSARHTAESKTAKQVPTKLYTVRRGEYLKQIAERYGLSNQELADLTTGLNAGSNLYIGQ 760
A KT K V VR G G+ N + T L G+ + +
Sbjct 74 ------VASEKTEKSVTATWLNVRSGA---------GVDNS----IVTSLKGGTKVTVES 114
Query 761 KINVPLHEVGEDDSKLNAKSAKAVPSVKTENYKVQRGETLSSIATASKISLSELLELNNL 820
+++ + K + K + + T + E ++ A A+ + ++ E+
Sbjct 115 TEANGWYKISYGEGKTGYVNGKYLGTTVTSAPAPEVKEETTTQAQAAPAAETKP-EVKQS 173
Query 821 KSATGLRAGQT-IKIPAGSTIPDEYVVQSGDSLNAVASKFNLQLDVLADLNGLNRNAGLR 879
AT L +T + PA T Y V+SGD++ A++SK+ + + N L+ ++ +
Sbjct 174 TPATVLPKAETKTETPAVDTTASTYTVKSGDTIWALSSKYGTSVQNIMSWNNLS-SSSIY 232
Query 880 VGQKLKL------TGEPSAHSTAKSKAKDNEI---------------------------- 905
VGQ L + T P A ++ + ++
Sbjct 233 VGQVLAVKQEAAKTASPKAEVKTEAPTAEKQVSAPVVKENTQTTTAKKEVTPQKQTNTQA 292
Query 906 ------------PDV------YTVKSGDTLGNIANRYSLQVDDLMQINGLRHSTLQAGQK 947
P V YTVKSGDTL IA + V + +NGL LQ GQ
Sbjct 293 PAQAAKPAPAPAPTVNTNASSYTVKSGDTLSKIATTFGTTVSKIKALNGLNSDNLQVGQV 352
Query 948 IKLTGDIEKVAASKTDSKSKTVSKSSGKTEDYTVKAGESLHSISSRLGLSSKELADLNDL 1007
+K+ G + + + + + ++ T + + + +S S A + L
Sbjct 353 LKVKGTVPTANTNSNSNATAPTTNTNNNTSNTSTSTPSKNTNTNSNASQGSSSTASASSL 412
Query 1008 SARASLQRGQ 1017
A A G+
Sbjct 413 IAEAQKHLGK 422
Score = 73.9 bits (180), Expect = 1e-16
Identities = 53/196 (27%), Positives = 96/196 (49%), Gaps = 15/196 (8%)
Query 880 VGQKLKLTGEPSAHSTAKSKAKDNEIPDVYTVKSGDTLGNIANRYSLQVDDLMQINGLRH 939
V Q T P A + ++ A D YTVKSGDT+ ++++Y V ++M N L
Sbjct 170 VKQSTPATVLPKAETKTETPAVDTTA-STYTVKSGDTIWALSSKYGTSVQNIMSWNNLSS 228
Query 940 STLQAGQKIKLTGDIEKVAASKTDSKSKTVSKSSGKTEDYTVKAGESLHSISSRLGLSSK 999
S++ GQ + + + K A+ K + K++ T + V A + +++ + K
Sbjct 229 SSIYVGQVLAVKQEAAKTASPKAEVKTEA------PTAEKQVSA--PVVKENTQTTTAKK 280
Query 1000 ELADLNDLSARASLQRGQTIQIPK-----TVTEYKIKRGDTLNGLASKYGMALAELADLN 1054
E+ + +A Q + P + Y +K GDTL+ +A+ +G ++++ LN
Sbjct 281 EVTPQKQTNTQAPAQAAKPAPAPAPTVNTNASSYTVKSGDTLSKIATTFGTTVSKIKALN 340
Query 1055 GLKPSTSLRIGDVIKV 1070
GL S +L++G V+KV
Sbjct 341 GLN-SDNLQVGQVLKV 355
Score = 59.3 bits (142), Expect = 4e-12
Identities = 57/211 (27%), Positives = 88/211 (42%), Gaps = 69/211 (33%)
Query 568 KPYIKTDTDIVVVQPKGKR-----------STYTVVSGDTLAIIAMKNGVSWRDIANWNQ 616
KP +K T V+ PK + STYTV SGDT+ ++ K G S ++I +WN
Sbjct 167 KPEVKQSTPATVL-PKAETKTETPAVDTTASTYTVKSGDTIWALSSKYGTSVQNIMSWNN 225
Query 617 IDPNRTLYAGTSLYLYD------------------AKPQIDSP----------AKSDTTP 648
+ + ++Y G L + A+ Q+ +P AK + TP
Sbjct 226 LS-SSSIYVGQVLAVKQEAAKTASPKAEVKTEAPTAEKQVSAPVVKENTQTTTAKKEVTP 284
Query 649 ---------------------------DSYTVKANDSLTGVAEQFGLTVKQLADLNDLNV 681
SYTVK+ D+L+ +A FG TV ++ LN LN
Sbjct 285 QKQTNTQAPAQAAKPAPAPAPTVNTNASSYTVKSGDTLSKIATTFGTTVSKIKALNGLN- 343
Query 682 TSGLFVGQKLTLKDKKTSSTTSARHTAESKT 712
+ L VGQ L +K ++ T++ A + T
Sbjct 344 SDNLQVGQVLKVKGTVPTANTNSNSNATAPT 374
Score = 30.4 bits (67), Expect = 0.004
Identities = 26/129 (20%), Positives = 56/129 (43%), Gaps = 20/129 (16%)
Query 292 TLNSAVDLNQISSVTGLSRTELYALNPGYRGDVIDPASPMRILIPADLSPSIDNKLKALK 351
T+ S L++I++ G + +++ ALN G D + + K+K
Sbjct 315 TVKSGDTLSKIATTFGTTVSKIKALN-GLNSDNLQVGQVL--------------KVKGTV 359
Query 352 PSGNSGLWASSSAPVQPTPTVSISTTPRNSNSGQPLATTKTSPPVMTASASRPTVSSTVS 411
P+ N+ ++++A PT + + N+++ P T T+ S+S + SS ++
Sbjct 360 PTANTNSNSNATA-----PTTNTNNNTSNTSTSTPSKNTNTNSNASQGSSSTASASSLIA 414
Query 412 SISSSIRKS 420
+ K+
Sbjct 415 EAQKHLGKA 423
Score = 28.1 bits (61), Expect = 0.019
Identities = 47/198 (24%), Positives = 78/198 (39%), Gaps = 11/198 (6%)
Query 361 SSSAPVQPTPTVSISTTPRNSNSGQPLATTKTSPPVMTASASRPTVSS--TVSSISSSIR 418
+ +AP T +TP P A TKT P + +AS TV S T+ ++SS
Sbjct 158 AQAAPAAETKPEVKQSTPATV---LPKAETKTETPAVDTTASTYTVKSGDTIWALSSKYG 214
Query 419 KSATP-KGADALAQFAASADIPSAPRIPVAVTPATNVKQVAIEPPISKAERQDIVAVIRA 477
S + L+ + A + A T A+ +V E P AE+Q V++
Sbjct 215 TSVQNIMSWNNLSSSSIYVGQVLAVKQEAAKT-ASPKAEVKTEAPT--AEKQVSAPVVKE 271
Query 478 EGEKESVKQALEPQPTQAEKDQVLAELSAIVPKGTQIVDPLDGKIKLTAIQTSQSVADQQ 537
+ + K+ + PQ + Q A+ + P V+ + + T +A
Sbjct 272 NTQTTTAKKEVTPQ--KQTNTQAPAQAAKPAPAPAPTVNTNASSYTVKSGDTLSKIATTF 329
Query 538 GKEVTKEFAYPKALADNV 555
G V+K A +DN+
Sbjct 330 GTTVSKIKALNGLNSDNL 347
Score = 25.0 bits (53), Expect = 0.16
Identities = 33/137 (24%), Positives = 53/137 (39%), Gaps = 23/137 (17%)
Query 325 IDPASPMRILIPADL---SPSIDNKLKALKPSGNSGLWASSSAPVQPTPTVSISTTPRNS 381
+ ++P +L A+ +P++D +WA SS T +I + S
Sbjct 170 VKQSTPATVLPKAETKTETPAVDTTASTYTVKSGDTIWALSSK--YGTSVQNIMSWNNLS 227
Query 382 NS----GQPLA----TTKTSPPVMTASASRPTVSSTVS-------SISSSIRKSATPK-- 424
+S GQ LA KT+ P PT VS + +++ +K TP+
Sbjct 228 SSSIYVGQVLAVKQEAAKTASPKAEVKTEAPTAEKQVSAPVVKENTQTTTAKKEVTPQKQ 287
Query 425 -GADALAQFAASADIPS 440
A AQ A A P+
Sbjct 288 TNTQAPAQAAKPAPAPA 304
Score = 21.9 bits (45), Expect = 1.5
Identities = 14/43 (33%), Positives = 20/43 (47%), Gaps = 5/43 (12%)
Query 1030 IKRGDTLNGLASKYGMALAELADLNGLK-----PSTSLRIGDV 1067
++ GDTL G+A G + L N L P L+I +V
Sbjct 32 VEAGDTLWGIAQDKGTTVDALKKANNLTSDKIVPGQKLQITEV 74
Lambda K H a alpha
0.311 0.127 0.351 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 5746496
Database: 35f77bfde98fe49acbdc3793288d6de8.SwissProt.fasta
Posted date: May 20, 2024 2:32 PM
Number of letters in database: 6,526
Number of sequences in database: 15
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
