BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: a6481b7256e7bf415f8b770a7bc8ab18.SwissProt.fasta
16 sequences; 7,587 total letters
Query= ACIAD1160
Length=490
Score E
Sequences producing significant alignments: (Bits) Value
O31101 Solvent efflux pump outer membrane protein SrpC [Pseudomon... 172 2e-51
Q93PU3 Toluene efflux pump outer membrane protein TtgI [Pseudomon... 172 2e-51
Q8CWA4 Cation efflux system protein CusC [Escherichia coli O6:H1 ... 171 3e-51
Q8XBY3 Cation efflux system protein CusC [Escherichia coli O157:H7] 167 9e-50
P77211 Cation efflux system protein CusC [Escherichia coli (strai... 164 2e-48
Q51487 Outer membrane protein OprM [Pseudomonas aeruginosa (strai... 162 1e-47
Q9ZHD2 Probable outer membrane lipoprotein SilC [Salmonella typhi... 158 2e-46
P0C071 Multidrug/solvent efflux pump outer membrane protein MepC ... 147 4e-42
Q88N32 Probable efflux pump outer membrane protein TtgC [Pseudomo... 147 4e-42
Q9KJC1 Antibiotic efflux pump outer membrane protein ArpC [Pseudo... 147 4e-42
Q9WWZ8 Toluene efflux pump outer membrane protein TtgC [Pseudomon... 147 5e-42
Q51397 Outer membrane protein OprJ [Pseudomonas aeruginosa (strai... 139 2e-39
Q9KWV3 Toluene efflux pump outer membrane protein TtgF [Pseudomon... 138 5e-39
Q849R1 Probable efflux pump outer membrane protein SepC [Pseudomo... 138 5e-39
P24145 Nodulation protein T [Rhizobium leguminosarum bv. trifolii] 125 1e-34
P15727 Nodulation protein T [Rhizobium leguminosarum bv. viciae] 117 1e-31
>O31101 Solvent efflux pump outer membrane protein SrpC [Pseudomonas
putida]
Length=470
Score = 172 bits (437), Expect = 2e-51
Identities = 125/446 (28%), Positives = 215/446 (48%), Gaps = 5/446 (1%)
Query 31 PIYQQPIIKADPQYKYASSFKWVQTQ-SLISQSSQWWELYQDDKLNFLIQQLNAENLTLK 89
P YQQP Q+ ++ Q S+ + + E ++D L L+ N L+
Sbjct 21 PDYQQPAAPMQAQWPTGQAYGGQGDQRSIATALPKAKEFFKDPALVRLLDAALENNRDLR 80
Query 90 QAEARYRHASALFNVQRTARLPTLGVEAAANRNGRKNNES---NHQSSAQFSTGLQASWI 146
A AL+ +QR R PTL +A+ NR ++ S + + +Q+ GL ++
Sbjct 81 IAAKNVESYRALYRIQRAERFPTLDGQASGNRTRLPDDLSPTGDSRIDSQYQVGLVTAYE 140
Query 147 PDLWGRVTKAIQGQQASVDASQADLAAIKLNQQLMAAQSYWNIRLLDLQLNVLKQTKQSY 206
DL+GR+ A++ ++++ A +Y+ R L + + T SY
Sbjct 141 LDLFGRIRSLSNQALEKYLATEEAQRSVQIALIGDVATTYFLWRTDQALLELTEATLTSY 200
Query 207 VRSLQILKNQYQAGMIARADVIQAETQLKQVEIQHIEQQRERNLQENILAVLLGQTV-TQ 265
V SL ++++ AG + DV QA T + Q + Q R N L +LLG + T
Sbjct 201 VESLAMIESSAWAGTSSELDVRQARTLVNQAQAQQALYTRRIAQDVNALELLLGSKIPTD 260
Query 266 FQLSKQTAQFHLPEIPVQLPSHLLIQRPDVIRAERELAATHAQLGLAQTAWLPDVSIGVN 325
+ A L ++P LP+ LL+ RPD+ AE +L A +A +G A+ A+ P +S+ +
Sbjct 261 LPKNSPLAMSALGKVPAGLPADLLLNRPDIRSAEHQLMAANANIGAARAAFFPRISLTAS 320
Query 326 GSLNNNIFLELFQSPNYLWSIGLGTVATVFDGGKRKAEINQAQANYEEKLATYKQAILTG 385
++ LF S + WS +F+ GK +A ++ A+ + +ATY+++I T
Sbjct 321 AGSASSDLDGLFNSGSDSWSFAPQISVPIFNAGKLRANLDYAELQKDVGVATYEKSIQTA 380
Query 386 WKEVEDGLMQSTSLKQQATEQAQLLNLANENERVVTQRYNAGLISYLEVVTAQNLRLQAE 445
++EV DGL + +Q + Q++L++ + QRY+ G+ SYL V+ AQ ++
Sbjct 381 FREVADGLAARGTYGKQLSAQSELVDNYKAYFSLAQQRYDQGVDSYLTVLDAQRELFSSQ 440
Query 446 QDRLKLQQRQMINSMQLIAALGTGWN 471
Q L Q Q+ + +QL ALG GW+
Sbjct 441 QKLLNDQLDQINSEVQLYKALGGGWS 466
>Q93PU3 Toluene efflux pump outer membrane protein TtgI [Pseudomonas
putida (strain DOT-T1E)]
Length=470
Score = 172 bits (437), Expect = 2e-51
Identities = 125/446 (28%), Positives = 215/446 (48%), Gaps = 5/446 (1%)
Query 31 PIYQQPIIKADPQYKYASSFKWVQTQ-SLISQSSQWWELYQDDKLNFLIQQLNAENLTLK 89
P YQQP Q+ ++ Q S+ + + E ++D L L+ N L+
Sbjct 21 PDYQQPAAPMQAQWPTGQAYGGQGDQRSIATALPKAKEFFKDPALVRLLDAALENNRDLR 80
Query 90 QAEARYRHASALFNVQRTARLPTLGVEAAANRNGRKNNES---NHQSSAQFSTGLQASWI 146
A AL+ +QR R PTL +A+ NR ++ S + + +Q+ GL ++
Sbjct 81 IAAKNVESYRALYRIQRAERFPTLDGQASGNRTRLPDDLSPTGDSRIDSQYQVGLVTAYE 140
Query 147 PDLWGRVTKAIQGQQASVDASQADLAAIKLNQQLMAAQSYWNIRLLDLQLNVLKQTKQSY 206
DL+GR+ A++ ++++ A +Y+ R L + + T SY
Sbjct 141 LDLFGRIRSLSNQALEKYLATEEAQRSVQIALIGDVATTYFLWRTDQALLELTEATLTSY 200
Query 207 VRSLQILKNQYQAGMIARADVIQAETQLKQVEIQHIEQQRERNLQENILAVLLGQTV-TQ 265
V SL ++++ AG + DV QA T + Q + Q R N L +LLG + T
Sbjct 201 VESLAMIESSAWAGTSSELDVRQARTLVNQAQAQQALYTRRIAQDVNALELLLGSKIPTD 260
Query 266 FQLSKQTAQFHLPEIPVQLPSHLLIQRPDVIRAERELAATHAQLGLAQTAWLPDVSIGVN 325
+ A L ++P LP+ LL+ RPD+ AE +L A +A +G A+ A+ P +S+ +
Sbjct 261 LPKNSPLAMSALGKVPAGLPADLLLNRPDIRSAEHQLMAANANIGAARAAFFPRISLTAS 320
Query 326 GSLNNNIFLELFQSPNYLWSIGLGTVATVFDGGKRKAEINQAQANYEEKLATYKQAILTG 385
++ LF S + WS +F+ GK +A ++ A+ + +ATY+++I T
Sbjct 321 AGSASSDLDGLFNSGSDSWSFAPQISVPIFNAGKLRANLDYAELQKDVGVATYEKSIQTA 380
Query 386 WKEVEDGLMQSTSLKQQATEQAQLLNLANENERVVTQRYNAGLISYLEVVTAQNLRLQAE 445
++EV DGL + +Q + Q++L++ + QRY+ G+ SYL V+ AQ ++
Sbjct 381 FREVADGLAARGTYGKQLSAQSELVDNYKAYFSLAQQRYDQGVDSYLTVLDAQRELFSSQ 440
Query 446 QDRLKLQQRQMINSMQLIAALGTGWN 471
Q L Q Q+ + +QL ALG GW+
Sbjct 441 QKLLNDQLDQINSEVQLYKALGGGWS 466
>Q8CWA4 Cation efflux system protein CusC [Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC)]
Length=460
Score = 171 bits (434), Expect = 3e-51
Identities = 122/461 (26%), Positives = 217/461 (47%), Gaps = 13/461 (3%)
Query 15 CVVL-FTGCNSNMLMYPPIYQQPIIKADPQYKYASSFKWVQTQSLISQSSQWWELYQDDK 73
CV L TGC+ P YQ+P + Q+ + + + Q++ W + D++
Sbjct 10 CVALALTGCS-----LAPDYQRPAMPVPQQFSLSQNGLVNAADNY--QNAGWRTFFVDNQ 62
Query 74 LNFLIQQLNAENLTLKQAEARYRHASALFNVQRTARLPTLGVEAAANRNGRKNNESNHQS 133
+ LI + N L+ A + + A A + + R P L E + + +G +S +
Sbjct 63 VKTLISEALVNNRDLRMAALKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGDS--AT 120
Query 134 SAQFSTGLQASWIPDLWGRVTKAIQGQQASVDASQADLAAIKLNQQLMAAQSYWNIRLLD 193
+ +FSTGL AS+ D +GR+ + ++ + A++ A+ + AQSY+N +L
Sbjct 121 TREFSTGLNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHILLVSNVAQSYFNQQLAY 180
Query 194 LQLNVLKQTKQSYVRSLQILKNQYQAGMIARADVIQAETQLKQVEIQHIEQQRERNLQEN 253
QL + ++T ++Y +S ++ Q G + QA ++ ++Q E N
Sbjct 181 AQLQIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANN 240
Query 254 ILAVLLGQ--TVTQFQLSKQTAQFHLPEIPVQLPSHLLIQRPDVIRAERELAATHAQLGL 311
L +LLG + Q Q + + ++P LPS +L+QRPD++ AE L A +A +G
Sbjct 241 ALQLLLGSYGKLPQAQ-TVNSDSLQSVKLPAGLPSQILLQRPDIMEAEHALMAANANIGA 299
Query 312 AQTAWLPDVSIGVNGSLNNNIFLELFQSPNYLWSIGLGTVATVFDGGKRKAEINQAQANY 371
A+ A+ P +S+ S ++ LF + + +W+ +F+ G+ +A ++ A+
Sbjct 300 ARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQ 359
Query 372 EEKLATYKQAILTGWKEVEDGLMQSTSLKQQATEQAQLLNLANENERVVTQRYNAGLISY 431
++ + Y+Q I +KEV D L SL Q + Q + L + Y G +SY
Sbjct 360 QQSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARTLYQHGAVSY 419
Query 432 LEVVTAQNLRLQAEQDRLKLQQRQMINSMQLIAALGTGWNQ 472
LEV+ A+ Q L L + +N + L ALG GW Q
Sbjct 420 LEVLDAERSLFATRQTLLDLNYARQVNEISLYTALGGGWQQ 460
>Q8XBY3 Cation efflux system protein CusC [Escherichia coli O157:H7]
Length=460
Score = 167 bits (424), Expect = 9e-50
Identities = 121/461 (26%), Positives = 216/461 (47%), Gaps = 13/461 (3%)
Query 15 CVVL-FTGCNSNMLMYPPIYQQPIIKADPQYKYASSFKWVQTQSLISQSSQWWELYQDDK 73
CV L TGC+ P YQ+P + Q+ + + + Q++ W + D++
Sbjct 10 CVALALTGCS-----LAPDYQRPAMPVPQQFSLSQNGLVNAADNY--QNAGWRTFFVDNQ 62
Query 74 LNFLIQQLNAENLTLKQAEARYRHASALFNVQRTARLPTLGVEAAANRNGRKNNESNHQS 133
+ LI + N L+ A + + A A + + R P L E + + +G +S +
Sbjct 63 VKTLISEALENNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGDS--AT 120
Query 134 SAQFSTGLQASWIPDLWGRVTKAIQGQQASVDASQADLAAIKLNQQLMAAQSYWNIRLLD 193
+ +FSTGL AS+ D +GR+ + ++ + A++ A+ + AQSY+N +L
Sbjct 121 TREFSTGLNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHILLVSNVAQSYFNQQLAY 180
Query 194 LQLNVLKQTKQSYVRSLQILKNQYQAGMIARADVIQAETQLKQVEIQHIEQQRERNLQEN 253
QL + ++T ++Y +S ++ Q G + QA ++ ++Q E N
Sbjct 181 AQLQIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANN 240
Query 254 ILAVLLGQ--TVTQFQLSKQTAQFHLPEIPVQLPSHLLIQRPDVIRAERELAATHAQLGL 311
L +LLG + Q Q + + ++P L S +L+QRPD++ AE L A +A +G
Sbjct 241 ALQLLLGSYGKLPQAQ-TVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGA 299
Query 312 AQTAWLPDVSIGVNGSLNNNIFLELFQSPNYLWSIGLGTVATVFDGGKRKAEINQAQANY 371
A+ A+ P +S+ S ++ LF + + +W+ +F+ G+ +A ++ A+
Sbjct 300 ARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQ 359
Query 372 EEKLATYKQAILTGWKEVEDGLMQSTSLKQQATEQAQLLNLANENERVVTQRYNAGLISY 431
++ + Y+Q I +KEV D L SL Q + Q + L + Y G +SY
Sbjct 360 QQSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSY 419
Query 432 LEVVTAQNLRLQAEQDRLKLQQRQMINSMQLIAALGTGWNQ 472
LEV+ A+ Q L L + +N + L ALG GW Q
Sbjct 420 LEVLDAERSLFATRQTVLDLNYARQVNEISLYTALGGGWQQ 460
>P77211 Cation efflux system protein CusC [Escherichia coli (strain
K12)]
Length=457
Score = 164 bits (414), Expect = 2e-48
Identities = 120/458 (26%), Positives = 215/458 (47%), Gaps = 13/458 (3%)
Query 15 CVVL-FTGCNSNMLMYPPIYQQPIIKADPQYKYASSFKWVQTQSLISQSSQWWELYQDDK 73
CV L TGC+ P YQ+P + Q+ + + + Q++ W + D++
Sbjct 10 CVALALTGCS-----LAPDYQRPAMPVPQQFSLSQNGLVNAADNY--QNAGWRTFFVDNQ 62
Query 74 LNFLIQQLNAENLTLKQAEARYRHASALFNVQRTARLPTLGVEAAANRNGRKNNESNHQS 133
+ LI + N L+ A + + A A + + R P L E + + +G N + N +
Sbjct 63 VKTLISEALVNNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSG--NLKGNTAT 120
Query 134 SAQFSTGLQASWIPDLWGRVTKAIQGQQASVDASQADLAAIKLNQQLMAAQSYWNIRLLD 193
+ +FSTGL AS+ D +GR+ + ++ + A++ A+ + AQSY+N +L
Sbjct 121 TREFSTGLNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHILLVSNVAQSYFNQQLAY 180
Query 194 LQLNVLKQTKQSYVRSLQILKNQYQAGMIARADVIQAETQLKQVEIQHIEQQRERNLQEN 253
QL + ++T ++Y +S ++ Q G + QA ++ ++Q E N
Sbjct 181 AQLQIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANN 240
Query 254 ILAVLLGQ--TVTQFQLSKQTAQFHLPEIPVQLPSHLLIQRPDVIRAERELAATHAQLGL 311
L +LLG + Q Q + + ++P L S +L+QRPD++ AE L A +A +G
Sbjct 241 ALQLLLGSYGKLPQAQ-TVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGA 299
Query 312 AQTAWLPDVSIGVNGSLNNNIFLELFQSPNYLWSIGLGTVATVFDGGKRKAEINQAQANY 371
A+ A+ P +S+ S ++ LF + + +W+ +F+ G+ +A ++ A+
Sbjct 300 ARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQ 359
Query 372 EEKLATYKQAILTGWKEVEDGLMQSTSLKQQATEQAQLLNLANENERVVTQRYNAGLISY 431
++ + Y+Q I +KEV D L SL Q + Q + L + Y G +SY
Sbjct 360 QQSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSY 419
Query 432 LEVVTAQNLRLQAEQDRLKLQQRQMINSMQLIAALGTG 469
LEV+ A+ Q L L + +N + L ALG G
Sbjct 420 LEVLDAERSLFATRQTLLDLNYARQVNEISLYTALGGG 457
>Q51487 Outer membrane protein OprM [Pseudomonas aeruginosa (strain
ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG
12228 / 1C / PRS 101 / PAO1)]
Length=485
Score = 162 bits (410), Expect = 1e-47
Identities = 117/470 (25%), Positives = 210/470 (45%), Gaps = 11/470 (2%)
Query 9 YLAVWGCVVLFTGCNSNMLMYPPIYQQPIIKADPQYKYASSFKWVQTQSLISQSSQWW-E 67
+L++ V+ +GC+ P YQ+P Y ++ + + + W E
Sbjct 5 FLSLAVAAVVLSGCS-----LIPDYQRPEAPVAAAYPQGQAYGQNTGAAAVPAADIGWRE 59
Query 68 LYQDDKLNFLIQQLNAENLTLKQAEARYRHASALFNVQRTARLPTLGVEAAANRN---GR 124
++D +L LI N L+ A A + +QR P +GV+ + R G
Sbjct 60 FFRDPQLQQLIGVALENNRDLRVAALNVEAFRAQYRIQRADLFPRIGVDGSGTRQRLPGD 119
Query 125 KNNESNHQSSAQFSTGL-QASWIPDLWGRVTKAIQGQQASVDASQADLAAIKLNQQLMAA 183
+ + S+Q+ L +W DL+GR+ A++ + + A
Sbjct 120 LSTTGSPAISSQYGVTLGTTAWELDLFGRLRSLRDQALEQYLATEQAQRSAQTTLVASVA 179
Query 184 QSYWNIRLLDLQLNVLKQTKQSYVRSLQILKNQYQAGMIARADVIQAETQLKQVEIQHIE 243
+Y ++ QL + K T +Y +S + + Y G+ + D+ QA+T ++ +
Sbjct 180 TAYLTLKADQAQLQLTKDTLGTYQKSFDLTQRSYDVGVASALDLRQAQTAVEGARATLAQ 239
Query 244 QQRERNLQENILAVLLGQTV-TQFQLSKQTAQFHLPEIPVQLPSHLLIQRPDVIRAEREL 302
R +N L +LLG + Q L E+P LPS LL +RPD++ AE +L
Sbjct 240 YTRLVAQDQNALVLLLGSGIPANLPQGLGLDQTLLTEVPAGLPSDLLQRRPDILEAEHQL 299
Query 303 AATHAQLGLAQTAWLPDVSIGVNGSLNNNIFLELFQSPNYLWSIGLGTVATVFDGGKRKA 362
A +A +G A+ A+ P +S+ N + LF + + W +F G +A
Sbjct 300 MAANASIGAARAAFFPSISLTANAGTMSRQLSGLFDAGSGSWLFQPSINLPIFTAGSLRA 359
Query 363 EINQAQANYEEKLATYKQAILTGWKEVEDGLMQSTSLKQQATEQAQLLNLANENERVVTQ 422
++ A+ + +A Y++AI T ++EV DGL + +Q Q L+ ++E ++ +
Sbjct 360 SLDYAKIQKDINVAQYEKAIQTAFQEVADGLAARGTFTEQLQAQRDLVKASDEYYQLADK 419
Query 423 RYNAGLISYLEVVTAQNLRLQAEQDRLKLQQRQMINSMQLIAALGTGWNQ 472
RY G+ +YL ++ AQ A+Q + + Q+ + + L ALG GWNQ
Sbjct 420 RYRTGVDNYLTLLDAQRSLFTAQQQLITDRLNQLTSEVNLYKALGGGWNQ 469
>Q9ZHD2 Probable outer membrane lipoprotein SilC [Salmonella typhimurium]
Length=461
Score = 158 bits (400), Expect = 2e-46
Identities = 110/456 (24%), Positives = 208/456 (46%), Gaps = 9/456 (2%)
Query 16 VVLFTGCNSNMLMYPPIYQQPIIKADPQYKYASSFKWVQTQSLISQSSQWWELYQDDKLN 75
+ + GC S P YQ+P Q+ + + S Q + W + D +++
Sbjct 12 IFILAGCVS----LAPEYQRPPAPVPQQFSLSKNSLTPAVNSY--QDTGWRNFFVDPQVS 65
Query 76 FLIQQLNAENLTLKQAEARYRHASALFNVQRTARLPTLGVEAAANRNGRKNNESNHQSSA 135
LI + N L+ A + A A FNV R P L + NG + ++
Sbjct 66 RLIGEALNNNRDLRMAALKVEEARAQFNVTDADRYPQLNASSGITYNGGLKGDK--PTTQ 123
Query 136 QFSTGLQASWIPDLWGRVTKAIQGQQASVDASQADLAAIKLNQQLMAAQSYWNIRLLDLQ 195
++ GL+ S+ D +G++ + + + AS+ A+ + +QSY++ +L Q
Sbjct 124 EYDAGLELSYELDFFGKLKNMSEADRQNYFASEEARRAVHILLVSNVSQSYFSQQLAYEQ 183
Query 196 LNVLKQTKQSYVRSLQILKNQYQAGMIARADVIQAETQLKQVEIQHIEQQRERNLQENIL 255
L + ++T ++Y +S ++ Q G + QA Q++ + +++ + N L
Sbjct 184 LRIARETLKNYEQSYAFVEQQLVTGSTNVLALEQARGQIESTRAEIAKREGDLAQANNAL 243
Query 256 AVLLGQ-TVTQFQLSKQTAQFHLPEIPVQLPSHLLIQRPDVIRAERELAATHAQLGLAQT 314
++LG + + + ++P L S +L+QRPD++ AE +L A A +G A+
Sbjct 244 QLVLGTYRAVPSEKGIKGGEIAPVKLPPNLSSQILLQRPDIMEAEYQLKAADANIGAARA 303
Query 315 AWLPDVSIGVNGSLNNNIFLELFQSPNYLWSIGLGTVATVFDGGKRKAEINQAQANYEEK 374
A+ P +++ S ++ LF S + +W+ +F+ G+ KA + A+ ++
Sbjct 304 AFFPSITLTSGLSSSSTELSSLFTSGSGMWNFIPKIEIPIFNAGRNKANLKLAEIRQQQS 363
Query 375 LATYKQAILTGWKEVEDGLMQSTSLKQQATEQAQLLNLANENERVVTQRYNAGLISYLEV 434
+ Y+Q I + +K+V D L SL QQ Q + L+ + Y +G +SY+EV
Sbjct 364 VVNYEQKIQSAFKDVSDTLALRDSLSQQLESQQRYLDSLQITLQRARGLYASGAVSYIEV 423
Query 435 VTAQNLRLQAEQDRLKLQQRQMINSMQLIAALGTGW 470
+ A+ +Q L L + +N + L ALG GW
Sbjct 424 LDAERSLFATQQTILDLTYSRQVNEINLFTALGGGW 459
>P0C071 Multidrug/solvent efflux pump outer membrane protein MepC
[Pseudomonas putida]
Length=484
Score = 147 bits (371), Expect = 4e-42
Identities = 113/448 (25%), Positives = 201/448 (45%), Gaps = 11/448 (2%)
Query 31 PIYQQPIIKADPQYKYASSFKWVQTQSLISQSSQWWELYQDDKLNFLIQQLNAENLTLKQ 90
P YQ P Q+ ++ Q+ + + W + + D L LIQ N L+
Sbjct 22 PDYQTPEAPVAAQWPQGPAYSPTQSADVAAAEQGWRQFFHDPALQQLIQTSLVNNRDLRV 81
Query 91 AEARYRHASALFNVQRTARLPTLGVEAAANR-----NGRKNNESNHQSSAQFSTGLQASW 145
A A + +QR P + + +R N + ES S + G+ A
Sbjct 82 AALNLDAYRAQYRIQRADLFPAVSATGSGSRQRVPANMSQTGESGITSQYSATLGVSAYE 141
Query 146 IPDLWGRVTKAIQGQQASVDASQADLAAIKLNQQLMAAQSYWNIRLLDLQLNVLKQTKQS 205
+ DL+GRV + + +S+ + ++ A +Y+ + + ++T ++
Sbjct 142 L-DLFGRVRSLTEQALETYLSSEQARRSTQIALVASVANAYYTWQADQALFKLTEETLKT 200
Query 206 YVRSLQILKNQYQAGMIARADVIQAETQLKQVEIQHIEQQRERNLQENILAVLLGQTVTQ 265
Y S + + + G+ + DV QA T ++ +++ + QR N L VLLG +
Sbjct 201 YEESYNLTRRSNEVGVASALDVSQARTAVEGARVKYSQYQRLVAQDVNSLTVLLGTGIPA 260
Query 266 FQLSK--QTAQFHLPEIPVQLPSHLLIQRPDVIRAERELAATHAQLGLAQTAWLPDVSIG 323
L+K + L E+P LPS +L +RPD+ AE L A +A +G A+ A+ P +S+
Sbjct 261 -DLAKPLELDADQLAEVPAGLPSDILQRRPDIQEAEHLLKAANANIGAARAAFFPSISLT 319
Query 324 VN-GSLNNNIFLELFQSPNYLWSIGLGTVATVFDGGKRKAEINQAQANYEEKLATYKQAI 382
N GSL+ ++ LF W +F+ G KA ++ ++ + +A Y++ I
Sbjct 320 ANAGSLSPDMG-HLFSGGQGTWLFQPQINLPIFNAGSLKASLDYSKIQKDINVAKYEKTI 378
Query 383 LTGWKEVEDGLMQSTSLKQQATEQAQLLNLANENERVVTQRYNAGLISYLEVVTAQNLRL 442
T ++EV DGL + ++Q Q L+ + R+ +RY G+ S L + AQ
Sbjct 379 QTAFQEVSDGLAARKTFEEQLQAQRDLVQANQDYYRLAERRYRIGIDSNLTFLDAQRNLF 438
Query 443 QAEQDRLKLQQRQMINSMQLIAALGTGW 470
A+Q + + Q+ + + L ALG GW
Sbjct 439 SAQQALIGDRLSQLTSEVNLYKALGGGW 466
>Q88N32 Probable efflux pump outer membrane protein TtgC [Pseudomonas
putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB
11950 / KT2440)]
Length=484
Score = 147 bits (371), Expect = 4e-42
Identities = 113/448 (25%), Positives = 201/448 (45%), Gaps = 11/448 (2%)
Query 31 PIYQQPIIKADPQYKYASSFKWVQTQSLISQSSQWWELYQDDKLNFLIQQLNAENLTLKQ 90
P YQ P Q+ ++ Q+ + + W + + D L LIQ N L+
Sbjct 22 PDYQTPEAPVAAQWPQGPAYSPTQSADVAAAEQGWRQFFHDPALQQLIQTSLVNNRDLRV 81
Query 91 AEARYRHASALFNVQRTARLPTLGVEAAANR-----NGRKNNESNHQSSAQFSTGLQASW 145
A A + +QR P + + +R N + ES S + G+ A
Sbjct 82 AALNLDAYRAQYRIQRADLFPAVSATGSGSRQRVPANMSQTGESGITSQYSATLGVSAYE 141
Query 146 IPDLWGRVTKAIQGQQASVDASQADLAAIKLNQQLMAAQSYWNIRLLDLQLNVLKQTKQS 205
+ DL+GRV + + +S+ + ++ A +Y+ + + ++T ++
Sbjct 142 L-DLFGRVRSLTEQALETYLSSEQARRSTQIALVASVANAYYTWQADQALFKLTEETLKT 200
Query 206 YVRSLQILKNQYQAGMIARADVIQAETQLKQVEIQHIEQQRERNLQENILAVLLGQTVTQ 265
Y S + + + G+ + DV QA T ++ +++ + QR N L VLLG +
Sbjct 201 YEESYNLTRRSNEVGVASALDVSQARTAVEGARVKYSQYQRLVAQDVNSLTVLLGTGIPA 260
Query 266 FQLSK--QTAQFHLPEIPVQLPSHLLIQRPDVIRAERELAATHAQLGLAQTAWLPDVSIG 323
L+K + L E+P LPS +L +RPD+ AE L A +A +G A+ A+ P +S+
Sbjct 261 -DLAKPLELDADQLAEVPAGLPSDILQRRPDIQEAEHLLKAANANIGAARAAFFPSISLT 319
Query 324 VN-GSLNNNIFLELFQSPNYLWSIGLGTVATVFDGGKRKAEINQAQANYEEKLATYKQAI 382
N GSL+ ++ LF W +F+ G KA ++ ++ + +A Y++ I
Sbjct 320 ANAGSLSPDMG-HLFSGGQGTWLFQPQINLPIFNAGSLKASLDYSKIQKDINVAKYEKTI 378
Query 383 LTGWKEVEDGLMQSTSLKQQATEQAQLLNLANENERVVTQRYNAGLISYLEVVTAQNLRL 442
T ++EV DGL + ++Q Q L+ + R+ +RY G+ S L + AQ
Sbjct 379 QTAFQEVSDGLAARKTFEEQLQAQRDLVQANQDYYRLAERRYRIGIDSNLTFLDAQRNLF 438
Query 443 QAEQDRLKLQQRQMINSMQLIAALGTGW 470
A+Q + + Q+ + + L ALG GW
Sbjct 439 SAQQALIGDRLSQLTSEVNLYKALGGGW 466
>Q9KJC1 Antibiotic efflux pump outer membrane protein ArpC [Pseudomonas
putida]
Length=484
Score = 147 bits (371), Expect = 4e-42
Identities = 113/448 (25%), Positives = 201/448 (45%), Gaps = 11/448 (2%)
Query 31 PIYQQPIIKADPQYKYASSFKWVQTQSLISQSSQWWELYQDDKLNFLIQQLNAENLTLKQ 90
P YQ P Q+ ++ Q+ + + W + + D L LIQ N L+
Sbjct 22 PDYQAPEAPVAAQWPQGPAYSPTQSADVAAAEQGWRQFFHDPALQQLIQTSLVNNRDLRV 81
Query 91 AEARYRHASALFNVQRTARLPTLGVEAAANR-----NGRKNNESNHQSSAQFSTGLQASW 145
A A + +QR P + + +R N + ES S + G+ A
Sbjct 82 AALNLDAYRAQYRIQRADLFPAVSATGSGSRQRVPANMSQTGESGITSQYSATLGVSAYE 141
Query 146 IPDLWGRVTKAIQGQQASVDASQADLAAIKLNQQLMAAQSYWNIRLLDLQLNVLKQTKQS 205
+ DL+GRV + + +S+ + ++ A +Y+ + + ++T ++
Sbjct 142 L-DLFGRVRSLTEQALETYLSSEQARRSTQIALVASVANAYYTWQADQALFKLTEETLKT 200
Query 206 YVRSLQILKNQYQAGMIARADVIQAETQLKQVEIQHIEQQRERNLQENILAVLLGQTVTQ 265
Y S + + + G+ + DV QA T ++ +++ + QR N L VLLG +
Sbjct 201 YEESYNLTRRSNEVGVASALDVSQARTAVEGARVKYSQYQRLVAQDVNSLTVLLGTGIPA 260
Query 266 FQLSK--QTAQFHLPEIPVQLPSHLLIQRPDVIRAERELAATHAQLGLAQTAWLPDVSIG 323
L+K + L E+P LPS +L +RPD+ AE L A +A +G A+ A+ P +S+
Sbjct 261 -DLAKPLELDADQLAEVPAGLPSDILQRRPDIQEAEHLLKAANANIGAARAAFFPSISLT 319
Query 324 VN-GSLNNNIFLELFQSPNYLWSIGLGTVATVFDGGKRKAEINQAQANYEEKLATYKQAI 382
N GSL+ ++ LF W +F+ G KA ++ ++ + +A Y++ I
Sbjct 320 ANAGSLSPDMG-HLFSGGQGTWLFQPQINLPIFNAGSLKASLDYSKIQKDINVAKYEKTI 378
Query 383 LTGWKEVEDGLMQSTSLKQQATEQAQLLNLANENERVVTQRYNAGLISYLEVVTAQNLRL 442
T ++EV DGL + ++Q Q L+ + R+ +RY G+ S L + AQ
Sbjct 379 QTAFQEVSDGLAARKTFEEQLQAQRDLVQANQDYYRLAERRYRIGIDSNLTFLDAQRNLF 438
Query 443 QAEQDRLKLQQRQMINSMQLIAALGTGW 470
A+Q + + Q+ + + L ALG GW
Sbjct 439 SAQQALIGDRLSQLTSEVNLYKALGGGW 466
>Q9WWZ8 Toluene efflux pump outer membrane protein TtgC [Pseudomonas
putida (strain DOT-T1E)]
Length=484
Score = 147 bits (370), Expect = 5e-42
Identities = 113/448 (25%), Positives = 201/448 (45%), Gaps = 11/448 (2%)
Query 31 PIYQQPIIKADPQYKYASSFKWVQTQSLISQSSQWWELYQDDKLNFLIQQLNAENLTLKQ 90
P YQ P Q+ ++ Q+ + + W + + D L LIQ N L+
Sbjct 22 PDYQTPEAPVAAQWPQGPAYSPTQSADVAAAEQGWRQFFHDPALQQLIQTSLVNNRDLRV 81
Query 91 AEARYRHASALFNVQRTARLPTLGVEAAANR-----NGRKNNESNHQSSAQFSTGLQASW 145
A A + +QR P + + +R N + ES S + G+ A
Sbjct 82 AALNLDAYRAQYRIQRADLFPAVSATGSGSRQRVPANMSQTGESGITSQYSATLGVSAYE 141
Query 146 IPDLWGRVTKAIQGQQASVDASQADLAAIKLNQQLMAAQSYWNIRLLDLQLNVLKQTKQS 205
+ DL+GRV + + +S+ + ++ A +Y+ + + ++T ++
Sbjct 142 L-DLFGRVRSLTEQALETYLSSEQARRSTQIALVASVANAYYTWQADQALFKLTEETLKT 200
Query 206 YVRSLQILKNQYQAGMIARADVIQAETQLKQVEIQHIEQQRERNLQENILAVLLGQTVTQ 265
Y S + + + G+ + DV QA T ++ +++ + QR N L VLLG +
Sbjct 201 YEESYNLTRRSNEVGVASALDVSQARTAVEGARVKYSQYQRLVAQDVNSLTVLLGTGIPA 260
Query 266 FQLSK--QTAQFHLPEIPVQLPSHLLIQRPDVIRAERELAATHAQLGLAQTAWLPDVSIG 323
L+K + L E+P LPS +L +RPD+ AE L A +A +G A+ A+ P +S+
Sbjct 261 -DLAKPLELDADQLAEVPAGLPSDILQRRPDIQEAEHLLKAANANIGAARAAFFPSISLT 319
Query 324 VN-GSLNNNIFLELFQSPNYLWSIGLGTVATVFDGGKRKAEINQAQANYEEKLATYKQAI 382
N GSL+ ++ LF W +F+ G KA ++ ++ + +A Y++ I
Sbjct 320 ANAGSLSPDMG-HLFAGGQGTWLFQPQINLPIFNAGSLKASLDYSKIQKDINVAKYEKTI 378
Query 383 LTGWKEVEDGLMQSTSLKQQATEQAQLLNLANENERVVTQRYNAGLISYLEVVTAQNLRL 442
T ++EV DGL + ++Q Q L+ + R+ +RY G+ S L + AQ
Sbjct 379 QTAFQEVSDGLAARKTFEEQLQAQRDLVQANQDYYRLAERRYRIGIDSNLTFLDAQRNLF 438
Query 443 QAEQDRLKLQQRQMINSMQLIAALGTGW 470
A+Q + + Q+ + + L ALG GW
Sbjct 439 SAQQALIGDRLSQLTSEVNLYKALGGGW 466
>Q51397 Outer membrane protein OprJ [Pseudomonas aeruginosa (strain
ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG
12228 / 1C / PRS 101 / PAO1)]
Length=479
Score = 139 bits (351), Expect = 2e-39
Identities = 113/449 (25%), Positives = 194/449 (43%), Gaps = 12/449 (3%)
Query 31 PIYQQPIIKADPQYKYASSFKWVQTQSLISQSSQWWELYQDDKLNFLIQQLNAENLTLKQ 90
P Y++P + A++ Q Q + W D +L L+ N +L+Q
Sbjct 24 PTYERPAAPVADSWSGAAA----QRQGAAIDTLDWKSFIVDAELRRLVDMALDNNRSLRQ 79
Query 91 AEARYRHASALFNVQRTARLPTLGVEAAANRNGRK-----NNESNHQSSAQFSTGLQASW 145
A A + +QR R+P L A NR + N S SS Q L
Sbjct 80 TLLDIEAARAQYRIQRADRVPGLNAAATGNRQRQPADLSAGNRSEVASSYQVGLALPEYE 139
Query 146 IPDLWGRVTKAIQGQQASVDASQADLAAIKLNQQLMAAQSYWNIRLLDLQLNVLKQTKQS 205
+ DL+GRV AS+ A ++ +Q+Y + +L + +QT S
Sbjct 140 L-DLFGRVKSLTDAALQQYLASEEAARAARIALVAEVSQAYLSYDGALRRLALTRQTLVS 198
Query 206 YVRSLQILKNQYQAGMIARADVIQAETQLKQVEIQHIEQQRERNLQENILAVLLGQTVTQ 265
S ++ + AG D +A ++Q + R++ N L +LLG
Sbjct 199 REYSFALIDQRRAAGAATALDYQEALGLVEQARAEQERNLRQKQQAFNALVLLLGSDDAA 258
Query 266 FQLSKQTAQFH--LPEIPVQLPSHLLIQRPDVIRAERELAATHAQLGLAQTAWLPDVSIG 323
+ + Q L +I PS L+ +RPD++ AE L A +A +G A+ A+ P +S+
Sbjct 259 QAIPRSPGQRPKLLQDIAPGTPSELIERRPDILAAEHRLRARNADIGAARAAFFPRISLT 318
Query 324 VNGSLNNNIFLELFQSPNYLWSIGLGTVATVFDGGKRKAEINQAQANYEEKLATYKQAIL 383
+ ++ LF + WS +FDGG+ +A ++ A+A + +A Y+ I
Sbjct 319 GSFGTSSAEMSGLFDGGSRSWSFLPTLTLPIFDGGRNRANLSLAEARKDSAVAAYEGTIQ 378
Query 384 TGWKEVEDGLMQSTSLKQQATEQAQLLNLANENERVVTQRYNAGLISYLEVVTAQNLRLQ 443
T ++EV D L S +L+++ L N +NE ++ RY +G+ ++L + AQ
Sbjct 379 TAFREVADALAASDTLRREEKALRALANSSNEALKLAKARYESGVDNHLRYLDAQRSSFL 438
Query 444 AEQDRLKLQQRQMINSMQLIAALGTGWNQ 472
E + ++ I + L ALG GW++
Sbjct 439 NEIAFIDGSTQRQIALVDLFRALGGGWDE 467
>Q9KWV3 Toluene efflux pump outer membrane protein TtgF [Pseudomonas
putida (strain DOT-T1E)]
Length=480
Score = 138 bits (348), Expect = 5e-39
Identities = 106/416 (25%), Positives = 188/416 (45%), Gaps = 15/416 (4%)
Query 65 WWELYQDDKLNFLIQQLNAENLTLKQAEARYRHASALFNVQRTARLPTLGVEAAANRNG- 123
W ++D + LI N L+Q AL ++R+A LP A R
Sbjct 60 WQVFFRDPVMRELIATALNNNRDLRQTALNVEAYRALHRIERSALLPRANTGVGATRQRL 119
Query 124 ----RKNNESNHQSSAQFSTGLQASWIPDLWGRVTK----AIQGQQASVDASQADLAAIK 175
E+ QS Q+ T L S+ D++GR+ A+Q A+ + ++ A+
Sbjct 120 PADLSPTGEAGIQS--QYDTTLSMSYELDMFGRLRSLERAALQEYLAAAETQRSMQIALI 177
Query 176 LNQQLMAAQSYWNIRLLDLQLNVLKQTKQSYVRSLQILKNQYQAGMIARADVIQAETQLK 235
+ A +Y + R QL++ + T SY SL ++K+ + G + DV QA + ++
Sbjct 178 AD----VAIAYLSWRSDQAQLDLARSTLASYENSLNLIKSSREVGTASALDVRQARSLVE 233
Query 236 QVEIQHIEQQRERNLQENILAVLLGQTVTQFQLSKQTAQFHLPEIPVQLPSHLLIQRPDV 295
+Q R+ N L +LLG + L + LP+ LL+ RPD+
Sbjct 234 TARVQQTLYTRQVAQDMNALQLLLGTKLPADLPISDVLDQPLAALSTGLPADLLLHRPDI 293
Query 296 IRAERELAATHAQLGLAQTAWLPDVSIGVNGSLNNNIFLELFQSPNYLWSIGLGTVATVF 355
AE L A +A +G A+ A+ P +++ ++ LF+ + LW+ +F
Sbjct 294 RAAEHRLLAANANIGAARAAFFPSITLTAAAGTASHELDGLFEGGSGLWAFMPRINLPIF 353
Query 356 DGGKRKAEINQAQANYEEKLATYKQAILTGWKEVEDGLMQSTSLKQQATEQAQLLNLANE 415
G+ + ++ + +A Y+++I T ++EV DGL + +Q Q L++
Sbjct 354 TAGRLRGNLDYRNVIKDINVAEYEKSIQTAFREVADGLAARGTFGEQLQAQRDLVDNNQA 413
Query 416 NERVVTQRYNAGLISYLEVVTAQNLRLQAEQDRLKLQQRQMINSMQLIAALGTGWN 471
++ QRY+ G+ +YL V+ AQ A+Q L + Q+ + ++L ALG GW+
Sbjct 414 YYKLAYQRYDEGVDNYLAVLDAQRELFAAQQQFLSDRLNQLSSEVRLFKALGGGWD 469
Score = 18.9 bits (37), Expect = 6.5
Identities = 25/101 (25%), Positives = 39/101 (39%), Gaps = 17/101 (17%)
Query 403 ATEQAQLLNLANENERVVTQRYNAGLISYLEVVTAQNLRL---QAEQDRLKLQQRQMINS 459
AT Q +L+ E + +Y+ L E+ LR A Q+ L + Q
Sbjct 114 ATRQRLPADLSPTGEAGIQSQYDTTLSMSYELDMFGRLRSLERAALQEYLAAAETQRSMQ 173
Query 460 MQLIAALGTG---WNQDEY-----------WENNLNKIDNS 486
+ LIA + W D+ +EN+LN I +S
Sbjct 174 IALIADVAIAYLSWRSDQAQLDLARSTLASYENSLNLIKSS 214
>Q849R1 Probable efflux pump outer membrane protein SepC [Pseudomonas
putida (strain ATCC 700007 / DSM 6899 / BCRC 17059 /
F1)]
Length=480
Score = 138 bits (348), Expect = 5e-39
Identities = 106/416 (25%), Positives = 188/416 (45%), Gaps = 15/416 (4%)
Query 65 WWELYQDDKLNFLIQQLNAENLTLKQAEARYRHASALFNVQRTARLPTLGVEAAANRNG- 123
W ++D + LI N L+Q AL ++R+A LP A R
Sbjct 60 WQVFFRDPVMRELIATALNNNRDLRQTALNVEAYRALHRIERSALLPRANTGVGATRQRL 119
Query 124 ----RKNNESNHQSSAQFSTGLQASWIPDLWGRVTK----AIQGQQASVDASQADLAAIK 175
E+ QS Q+ T L S+ D++GR+ A+Q A+ + ++ A+
Sbjct 120 PADLSPTGEAGIQS--QYDTTLSMSYELDMFGRLRSLERAALQEYLAAAETQRSMQIALI 177
Query 176 LNQQLMAAQSYWNIRLLDLQLNVLKQTKQSYVRSLQILKNQYQAGMIARADVIQAETQLK 235
+ A +Y + R QL++ + T SY SL ++K+ + G + DV QA + ++
Sbjct 178 AD----VAIAYLSWRSDQAQLDLARSTLASYENSLNLIKSSREVGTASALDVRQARSLVE 233
Query 236 QVEIQHIEQQRERNLQENILAVLLGQTVTQFQLSKQTAQFHLPEIPVQLPSHLLIQRPDV 295
+Q R+ N L +LLG + L + LP+ LL+ RPD+
Sbjct 234 TARVQQTLYTRQVAQDMNALQLLLGTKLPADLPISDVLDQPLAALSTGLPADLLLHRPDI 293
Query 296 IRAERELAATHAQLGLAQTAWLPDVSIGVNGSLNNNIFLELFQSPNYLWSIGLGTVATVF 355
AE L A +A +G A+ A+ P +++ ++ LF+ + LW+ +F
Sbjct 294 RAAEHRLLAANANIGAARAAFFPSITLTAAAGTASHELDGLFEGGSGLWAFMPRINLPIF 353
Query 356 DGGKRKAEINQAQANYEEKLATYKQAILTGWKEVEDGLMQSTSLKQQATEQAQLLNLANE 415
G+ + ++ + +A Y+++I T ++EV DGL + +Q Q L++
Sbjct 354 TAGRLRGNLDYRNVIKDINVAEYEKSIQTAFREVADGLAARGTFGEQLQAQRDLVDNNQA 413
Query 416 NERVVTQRYNAGLISYLEVVTAQNLRLQAEQDRLKLQQRQMINSMQLIAALGTGWN 471
++ QRY+ G+ +YL V+ AQ A+Q L + Q+ + ++L ALG GW+
Sbjct 414 YYKLAYQRYDEGVDNYLAVLDAQRELFAAQQQFLSDRLNQLSSEVRLFKALGGGWD 469
Score = 18.9 bits (37), Expect = 6.5
Identities = 25/101 (25%), Positives = 39/101 (39%), Gaps = 17/101 (17%)
Query 403 ATEQAQLLNLANENERVVTQRYNAGLISYLEVVTAQNLRL---QAEQDRLKLQQRQMINS 459
AT Q +L+ E + +Y+ L E+ LR A Q+ L + Q
Sbjct 114 ATRQRLPADLSPTGEAGIQSQYDTTLSMSYELDMFGRLRSLERAALQEYLAAAETQRSMQ 173
Query 460 MQLIAALGTG---WNQDEY-----------WENNLNKIDNS 486
+ LIA + W D+ +EN+LN I +S
Sbjct 174 IALIADVAIAYLSWRSDQAQLDLARSTLASYENSLNLIKSS 214
>P24145 Nodulation protein T [Rhizobium leguminosarum bv. trifolii]
Length=467
Score = 125 bits (315), Expect = 1e-34
Identities = 97/411 (24%), Positives = 191/411 (46%), Gaps = 5/411 (1%)
Query 65 WWELYQDDKLNFLIQQLNAENLTLKQAEARYRHASALFNVQRTARLPTLGVEAAANRNGR 124
WW + D L ++Q ++NL ++QA R A+A + + LP L + + +G+
Sbjct 51 WWTAFNDPMLTSYVEQGISQNLDVQQAIERIDLAAANVTIAEASALPDLTLSGSHTVSGQ 110
Query 125 KNNESNHQSSAQFSTG-LQASWIPDLWGRVTKAIQGQQASVDASQADLAAIKLNQQLMAA 183
K ++ STG L SW+ D +G + + +A++DA+ A + KL
Sbjct 111 KGKLRKQTYTSNTSTGELSLSWLLD-FGVYKRNTESAEAALDAAYASVDMAKLAFINDII 169
Query 184 QSYWNIRLLDLQLNVLKQTKQSYVRSLQILKNQYQAGMIARADVIQAETQLKQVEIQHIE 243
SY + R +L + + +S + ++ K+++ AG +AR DV++AE ++ +
Sbjct 170 SSYVDARYYQRRLALSQANLKSRRETFELTKSKFAAGAVARMDVVRAEGLVQSTLAEIPS 229
Query 244 QQRERNLQENILAVLLGQTVTQF--QLSKQTAQ-FHLPEIPVQLPSHLLIQRPDVIRAER 300
+ + +A LLG+ +++K + Q ++ V +P+ ++ RPD+ +AER
Sbjct 230 LDANFRISAHRIATLLGKPAGSMVEEIAKGSNQPAFRADVNVGIPADIIRNRPDIRKAER 289
Query 301 ELAATHAQLGLAQTAWLPDVSIGVNGSLNNNIFLELFQSPNYLWSIGLGTVATVFDGGKR 360
+LA + AQ+G+A+ P +++ + S + I WS G + DGG
Sbjct 290 DLADSTAQIGVAEAKLFPSITLSGSISPSGGINERGVYGNLTPWSFGPKLKLPILDGGGL 349
Query 361 KAEINQAQANYEEKLATYKQAILTGWKEVEDGLMQSTSLKQQATEQAQLLNLANENERVV 420
+A+++ A++ +K +L ++VE+ L+ + + + +A E R+
Sbjct 350 RADVDSAKSKATVSYLKWKSRVLNAIEQVENALVAMQREGRTVRALKREVEIAQETLRLS 409
Query 421 TQRYNAGLISYLEVVTAQNLRLQAEQDRLKLQQRQMINSMQLIAALGTGWN 471
T Y G S L+++ AQ + + Q L A+G+G+N
Sbjct 410 TSSYKDGASSLLDLLEAQRSLSVTQASLARAVQEWAKLYAVLNIAIGSGYN 460
>P15727 Nodulation protein T [Rhizobium leguminosarum bv. viciae]
Length=482
Score = 117 bits (293), Expect = 1e-31
Identities = 101/413 (24%), Positives = 192/413 (46%), Gaps = 11/413 (3%)
Query 63 SQWWELYQDDKLNFLIQQLNAENLTLKQAEARYRHASALFNVQRTARLPTLGVEAAANRN 122
S WW+ + D LN + ENL+++QA R A+A + LP +
Sbjct 49 SAWWDSFSDRTLNQYVASGLDENLSVQQALERVNAAAADVTIAGAGGLPKAS-HTTSGEI 107
Query 123 GRKNNESNHQSSAQFSTGLQASWIPDLWGRVTKAIQGQQASVDASQADLAAIKLNQQLMA 182
G+ + ++ Q+ + S L +W+ D++G+ ++ + AS+D++ A + A KL
Sbjct 108 GKGGDITSTQNIS--SVQLSLTWLLDVFGQYRRSTESALASLDSAHAAVDAAKLALIKDL 165
Query 183 AQSYWNIRLLDLQLNVLKQTKQSYVRSLQILKNQYQAGMIARADVIQAETQLKQVEIQHI 242
SY + R ++++ + +S + Q +AG +R DV+QAE ++ +
Sbjct 166 VSSYIDARYYQQRVSISRANLKSRQETYDFTNLQVEAGAASRQDVLQAEGLVRSTIAEIP 225
Query 243 EQQRERNLQENILAVLL---GQTVTQFQLSKQTAQ-FHLPEIPVQLPSHLLIQRPDVIRA 298
+ + + +A LL +TV + QL K Q + +I +P+ L+ R D+ +A
Sbjct 226 RLELNFRVSAHHIAALLALPSETVIK-QLQKSEGQPVYRGKINAGIPADLIRNRFDIRQA 284
Query 299 ERELAATHAQLGLAQTAWLPDVSIGVNGSLNNNIFLELFQSPNYL-WSIGLGTVATVFDG 357
ER+LAA AQ+G+A+ P +I ++GS+ + + + L WS G + DG
Sbjct 285 ERDLAAATAQIGVAEAQLYP--AITLSGSITPSYIKQRGRHGGILKWSFGPSLDLPILDG 342
Query 358 GKRKAEINQAQANYEEKLATYKQAILTGWKEVEDGLMQSTSLKQQATEQAQLLNLANENE 417
G+ +A + ++++ ++K +LT +EVED L + + + E
Sbjct 343 GRLRANVETSKSDAAAAYISWKLTVLTAVQEVEDALTAVRRDVHTENSRRRQVETIEEAL 402
Query 418 RVVTQRYNAGLISYLEVVTAQNLRLQAEQDRLKLQQRQMINSMQLIAALGTGW 470
++ T Y G S L+V+ AQ A+ Q+ + ++L A+ G+
Sbjct 403 KLSTASYTDGASSLLDVLEAQRQVSSAQASLAAAIQQLAKDHVRLNVAIRGGF 455
Lambda K H a alpha
0.317 0.129 0.371 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 2944943
Database: a6481b7256e7bf415f8b770a7bc8ab18.SwissProt.fasta
Posted date: May 20, 2024 4:59 AM
Number of letters in database: 7,587
Number of sequences in database: 16
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
