BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 648235413d96ff228f557ce2e7cae2b1.SwissProt.fasta
15 sequences; 4,800 total letters
Query= ACIAD1169
Length=41
Score E
Sequences producing significant alignments: (Bits) Value
Q0KFM5 Formimidoylglutamase [Cupriavidus necator (strain ATCC 176... 41.2 9e-10
Q6LQ58 Formimidoylglutamase [Photobacterium profundum (strain SS9)] 41.2 9e-10
Q7WJ55 Formimidoylglutamase [Bordetella bronchiseptica (strain AT... 40.0 2e-09
A0KF85 Formimidoylglutamase [Aeromonas hydrophila subsp. hydrophi... 39.7 3e-09
C3LLQ0 Formimidoylglutamase [Vibrio cholerae serotype O1 (strain ... 39.3 4e-09
Q9KSQ2 Formimidoylglutamase [Vibrio cholerae serotype O1 (strain ... 39.3 4e-09
A5F1X7 Formimidoylglutamase [Vibrio cholerae serotype O1 (strain ... 39.3 4e-09
Q13PQ0 Formimidoylglutamase [Paraburkholderia xenovorans (strain ... 38.9 6e-09
P60111 Formimidoylglutamase [Vibrio vulnificus (strain YJ016)] 38.9 6e-09
Q8DA19 Formimidoylglutamase [Vibrio vulnificus (strain CMCP6)] 38.9 6e-09
A4SSN4 Formimidoylglutamase [Aeromonas salmonicida (strain A449)] 38.5 8e-09
C1BBD1 Formimidoylglutamase [Rhodococcus opacus (strain B4)] 38.5 8e-09
Q0S7R0 Formimidoylglutamase [Rhodococcus jostii (strain RHA1)] 38.5 8e-09
Q9HZ59 Formimidoylglutamase [Pseudomonas aeruginosa (strain ATCC ... 36.2 5e-08
P19452 Formimidoylglutamase [Klebsiella aerogenes] 34.7 2e-07
>Q0KFM5 Formimidoylglutamase [Cupriavidus necator (strain ATCC
17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier
337)]
Length=316
Score = 41.2 bits (95), Expect = 9e-10
Identities = 16/36 (44%), Positives = 29/36 (81%), Gaps = 0/36 (0%)
Query 1 MIKHSWKIQVFDLAKYNPRFDIDHRTAKLAAYIIYQ 36
+ +HS K++V DLA+YNP++D DH+ A++AA + ++
Sbjct 278 LARHSGKLRVADLAEYNPQYDRDHQGARVAARLAWR 313
>Q6LQ58 Formimidoylglutamase [Photobacterium profundum (strain
SS9)]
Length=364
Score = 41.2 bits (95), Expect = 9e-10
Identities = 18/29 (62%), Positives = 25/29 (86%), Gaps = 0/29 (0%)
Query 7 KIQVFDLAKYNPRFDIDHRTAKLAAYIIY 35
K+ V DLA+YNPRFDID++TA+LAA + +
Sbjct 329 KLLVADLAEYNPRFDIDNQTARLAARLTW 357
>Q7WJ55 Formimidoylglutamase [Bordetella bronchiseptica (strain
ATCC BAA-588 / NCTC 13252 / RB50)]
Length=317
Score = 40.0 bits (92), Expect = 2e-09
Identities = 16/37 (43%), Positives = 29/37 (78%), Gaps = 0/37 (0%)
Query 2 IKHSWKIQVFDLAKYNPRFDIDHRTAKLAAYIIYQYI 38
++ S K+++ DLA+ NP +DIDHRTA++AA + ++ +
Sbjct 276 VRASGKLRLADLAECNPAYDIDHRTARVAARLAWRLL 312
>A0KF85 Formimidoylglutamase [Aeromonas hydrophila subsp. hydrophila
(strain ATCC 7966 / DSM 30187 / BCRC 13018 / CCUG 14551
/ JCM 1027 / KCTC 2358 / NCIMB 9240 / NCTC 8049)]
Length=314
Score = 39.7 bits (91), Expect = 3e-09
Identities = 17/37 (46%), Positives = 29/37 (78%), Gaps = 0/37 (0%)
Query 2 IKHSWKIQVFDLAKYNPRFDIDHRTAKLAAYIIYQYI 38
I+ S K+++ DLA+YNP D D+R+A++AA +++Q I
Sbjct 277 IRASGKLRLADLAEYNPSLDQDNRSARVAARLVHQLI 313
>C3LLQ0 Formimidoylglutamase [Vibrio cholerae serotype O1 (strain
M66-2)]
Length=336
Score = 39.3 bits (90), Expect = 4e-09
Identities = 16/33 (48%), Positives = 23/33 (70%), Gaps = 0/33 (0%)
Query 7 KIQVFDLAKYNPRFDIDHRTAKLAAYIIYQYIN 39
K+ + D+A+YNP FDID TA+LAA + + N
Sbjct 292 KLMIADIAEYNPSFDIDQHTARLAARLCWDIAN 324
>Q9KSQ2 Formimidoylglutamase [Vibrio cholerae serotype O1 (strain
ATCC 39315 / El Tor Inaba N16961)]
Length=336
Score = 39.3 bits (90), Expect = 4e-09
Identities = 16/33 (48%), Positives = 23/33 (70%), Gaps = 0/33 (0%)
Query 7 KIQVFDLAKYNPRFDIDHRTAKLAAYIIYQYIN 39
K+ + D+A+YNP FDID TA+LAA + + N
Sbjct 292 KLMIADIAEYNPSFDIDQHTARLAARLCWDIAN 324
>A5F1X7 Formimidoylglutamase [Vibrio cholerae serotype O1 (strain
ATCC 39541 / Classical Ogawa 395 / O395)]
Length=336
Score = 39.3 bits (90), Expect = 4e-09
Identities = 16/33 (48%), Positives = 23/33 (70%), Gaps = 0/33 (0%)
Query 7 KIQVFDLAKYNPRFDIDHRTAKLAAYIIYQYIN 39
K+ + D+A+YNP FDID TA+LAA + + N
Sbjct 292 KLMIADIAEYNPSFDIDQHTARLAARLCWDIAN 324
>Q13PQ0 Formimidoylglutamase [Paraburkholderia xenovorans (strain
LB400)]
Length=322
Score = 38.9 bits (89), Expect = 6e-09
Identities = 16/37 (43%), Positives = 27/37 (73%), Gaps = 0/37 (0%)
Query 2 IKHSWKIQVFDLAKYNPRFDIDHRTAKLAAYIIYQYI 38
++ S K++V D+A+YNP D D RTA++AA + Y+ +
Sbjct 286 VRASGKLRVADIAEYNPTLDQDRRTARVAARLAYRLL 322
>P60111 Formimidoylglutamase [Vibrio vulnificus (strain YJ016)]
Length=336
Score = 38.9 bits (89), Expect = 6e-09
Identities = 15/39 (38%), Positives = 27/39 (69%), Gaps = 0/39 (0%)
Query 1 MIKHSWKIQVFDLAKYNPRFDIDHRTAKLAAYIIYQYIN 39
++ H K+ + D+A+YNP +D+D +TA+LAA + + N
Sbjct 289 ILAHRDKLMLADIAEYNPTYDVDSQTARLAARLCWDIAN 327
>Q8DA19 Formimidoylglutamase [Vibrio vulnificus (strain CMCP6)]
Length=336
Score = 38.9 bits (89), Expect = 6e-09
Identities = 15/39 (38%), Positives = 27/39 (69%), Gaps = 0/39 (0%)
Query 1 MIKHSWKIQVFDLAKYNPRFDIDHRTAKLAAYIIYQYIN 39
++ H K+ + D+A+YNP +D+D +TA+LAA + + N
Sbjct 289 ILAHRDKLMLADIAEYNPTYDVDSQTARLAARLCWDIAN 327
>A4SSN4 Formimidoylglutamase [Aeromonas salmonicida (strain A449)]
Length=314
Score = 38.5 bits (88), Expect = 8e-09
Identities = 16/35 (46%), Positives = 28/35 (80%), Gaps = 0/35 (0%)
Query 2 IKHSWKIQVFDLAKYNPRFDIDHRTAKLAAYIIYQ 36
I+ S K+++ DLA+YNP D D+R+A++AA +++Q
Sbjct 277 IQASGKLRLADLAEYNPNLDQDNRSARVAARLVHQ 311
>C1BBD1 Formimidoylglutamase [Rhodococcus opacus (strain B4)]
Length=320
Score = 38.5 bits (88), Expect = 8e-09
Identities = 18/37 (49%), Positives = 26/37 (70%), Gaps = 0/37 (0%)
Query 2 IKHSWKIQVFDLAKYNPRFDIDHRTAKLAAYIIYQYI 38
I S K+ V D+A+ NP FDID+RTA+ AA I++ +
Sbjct 276 IAASGKLAVVDVAELNPSFDIDNRTARTAARFIHRIV 312
>Q0S7R0 Formimidoylglutamase [Rhodococcus jostii (strain RHA1)]
Length=320
Score = 38.5 bits (88), Expect = 8e-09
Identities = 17/34 (50%), Positives = 26/34 (76%), Gaps = 0/34 (0%)
Query 5 SWKIQVFDLAKYNPRFDIDHRTAKLAAYIIYQYI 38
S K+ V D+A+ NP FDID+RTA+ AA +I++ +
Sbjct 279 SGKLAVCDVAELNPSFDIDNRTARTAARLIHRIV 312
>Q9HZ59 Formimidoylglutamase [Pseudomonas aeruginosa (strain ATCC
15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 /
1C / PRS 101 / PAO1)]
Length=311
Score = 36.2 bits (82), Expect = 5e-08
Identities = 15/37 (41%), Positives = 26/37 (70%), Gaps = 0/37 (0%)
Query 3 KHSWKIQVFDLAKYNPRFDIDHRTAKLAAYIIYQYIN 39
K S K+++ D+A+ NP+ D D RTA++AA ++ +N
Sbjct 275 KASGKLRLADIAELNPQLDSDQRTARIAARLVDSLVN 311
>P19452 Formimidoylglutamase [Klebsiella aerogenes]
Length=222
Score = 34.7 bits (78), Expect = 2e-07
Identities = 15/36 (42%), Positives = 24/36 (67%), Gaps = 0/36 (0%)
Query 5 SWKIQVFDLAKYNPRFDIDHRTAKLAAYIIYQYINY 40
S K+Q DL ++NP FDID + A+ AA + +Q ++
Sbjct 185 SGKLQAVDLVEFNPLFDIDGQGARAAARVAWQIAHW 220
Lambda K H a alpha
0.343 0.150 0.508 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 118950
Database: 648235413d96ff228f557ce2e7cae2b1.SwissProt.fasta
Posted date: Jun 3, 2024 5:15 PM
Number of letters in database: 4,800
Number of sequences in database: 15
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
