BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 8baff85f9c3e4cd8ca8866299440eae3.SwissProt.fasta
3 sequences; 2,273 total letters
Query= ACIAD1174
Length=416
Score E
Sequences producing significant alignments: (Bits) Value
O94556 Anaphase-promoting complex subunit 8 [Schizosaccharomyces ... 42.4 8e-08
Q8BRH0 Protein O-mannosyl-transferase TMTC3 [Mus musculus] 40.8 3e-07
Q9N593 Cell division cycle protein 27 homolog [Caenorhabditis ele... 39.7 6e-07
>O94556 Anaphase-promoting complex subunit 8 [Schizosaccharomyces
pombe (strain 972 / ATCC 24843)]
Length=565
Score = 42.4 bits (98), Expect = 8e-08
Identities = 20/81 (25%), Positives = 47/81 (58%), Gaps = 0/81 (0%)
Query 75 LTPQDPKVWKSLTYLQIRINKPKAALTSVTKAVELEPTNDALKLQQAYLYNQLKQDHQAL 134
L P D ++W++L +I++P+ A+ S +A+ TN ++ ++ LY +L+ + A
Sbjct 435 LRPYDQRMWQALGNCYEKIDRPQEAIKSYKRALLGSQTNSSILVRLGNLYEELQDLNSAA 494
Query 135 KIFKQLTLSSDADIATKSKQA 155
++KQ + + +I+ ++ +A
Sbjct 495 SMYKQCIKTEETEISPETIKA 515
Score = 23.5 bits (49), Expect = 0.060
Identities = 16/84 (19%), Positives = 38/84 (45%), Gaps = 3/84 (4%)
Query 64 QAEKLLLDLSKLTPQDPKVWKSLTYLQIRINKPKAALTSVTKAVELEPTNDALKLQQAYL 123
++ +L +D+++ +D + W L ++ AL +A L P + +
Sbjct 393 ESYRLAVDVNR---KDYRAWYGLGQTYEVLDMHFYALYYFQRATALRPYDQRMWQALGNC 449
Query 124 YNQLKQDHQALKIFKQLTLSSDAD 147
Y ++ + +A+K +K+ L S +
Sbjct 450 YEKIDRPQEAIKSYKRALLGSQTN 473
Score = 18.9 bits (37), Expect = 1.6
Identities = 9/46 (20%), Positives = 24/46 (52%), Gaps = 0/46 (0%)
Query 93 INKPKAALTSVTKAVELEPTNDALKLQQAYLYNQLKQDHQALKIFK 138
+++ + A+T +A++L + + Y +LK H A++ ++
Sbjct 351 LSEHEKAVTYFKRALQLNRNYLSAWTLMGHEYVELKNTHAAIESYR 396
>Q8BRH0 Protein O-mannosyl-transferase TMTC3 [Mus musculus]
Length=920
Score = 40.8 bits (94), Expect = 3e-07
Identities = 24/93 (26%), Positives = 47/93 (51%), Gaps = 0/93 (0%)
Query 47 IYDKWDQFYKIEKTNPQQAEKLLLDLSKLTPQDPKVWKSLTYLQIRINKPKAALTSVTKA 106
+Y + ++ ++A++L + P + + S L +++NKP A + KA
Sbjct 535 VYINLANLIRANESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKA 594
Query 107 VELEPTNDALKLQQAYLYNQLKQDHQALKIFKQ 139
+EL+ N L A +Y +LK+ ++ALK F +
Sbjct 595 LELDRNNADLWYNLAIVYIELKEPNEALKNFNR 627
Score = 35.4 bits (80), Expect = 1e-05
Identities = 23/77 (30%), Positives = 40/77 (52%), Gaps = 0/77 (0%)
Query 64 QAEKLLLDLSKLTPQDPKVWKSLTYLQIRINKPKAALTSVTKAVELEPTNDALKLQQAYL 123
+A K LL+ PQD + +L L + K A + + KA++L+P + A L
Sbjct 657 EARKRLLNYVNEEPQDANGYFNLGMLAMDDKKDSEAESWMKKAIKLQPDFRSALFNLALL 716
Query 124 YNQLKQDHQALKIFKQL 140
Y+Q ++ +AL I ++L
Sbjct 717 YSQTAKELKALPILEEL 733
Score = 33.9 bits (76), Expect = 4e-05
Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 10/108 (9%)
Query 29 NLIHA--AAIEQSD--YRPGNPIYDKWDQFY------KIEKTNPQQAEKLLLDLSKLTPQ 78
NLI A + +E++D YR + + Q Y ++ P +A++ L +L
Sbjct 541 NLIRANESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRN 600
Query 79 DPKVWKSLTYLQIRINKPKAALTSVTKAVELEPTNDALKLQQAYLYNQ 126
+ +W +L + I + +P AL + +A+EL P + A L +
Sbjct 601 NADLWYNLAIVYIELKEPNEALKNFNRALELNPKHKLALFNSAILMQE 648
Score = 22.3 bits (46), Expect = 0.14
Identities = 22/106 (21%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query 64 QAEKLLLDLSKLTPQDPKVWKSLTYLQIRINK--------PKAALTSVTKAVELEPTNDA 115
+AE+ L++ L P + + + L+ ++ RI+ A T T+ E P+ D
Sbjct 794 KAERCLVETLALAPHEEYIQRHLSIVRDRISSSGIVEQPLAPADKTPGTEEREEIPSEDV 853
Query 116 LKLQQAYLYNQL--KQDHQALKIFKQLTLSSDADIATKSKQAVENL 159
++ Q+ +++ K KQ T ++D D K+ + ++ +
Sbjct 854 KEISSESRPPQILKTNNNRNSKSNKQSTENADQDAPHKTTKDIKEI 899
Score = 16.5 bits (31), Expect = 8.8
Identities = 6/15 (40%), Positives = 10/15 (67%), Gaps = 0/15 (0%)
Query 210 NRDTQSTGISNQNTD 224
NR+++S S +N D
Sbjct 871 NRNSKSNKQSTENAD 885
>Q9N593 Cell division cycle protein 27 homolog [Caenorhabditis
elegans]
Length=788
Score = 39.7 bits (91), Expect = 6e-07
Identities = 21/77 (27%), Positives = 39/77 (51%), Gaps = 0/77 (0%)
Query 75 LTPQDPKVWKSLTYLQIRINKPKAALTSVTKAVELEPTNDALKLQQAYLYNQLKQDHQAL 134
L+P+D + W L + ++ + ALT++ KAV + PTN A+ + + Q Q AL
Sbjct 624 LSPRDYRAWYGLGLVHLKKEQNLTALTNIQKAVNINPTNRAMLCTLSQIEQQRGQIDTAL 683
Query 135 KIFKQLTLSSDADIATK 151
+ + + D+A +
Sbjct 684 VLIDRALTLNPLDVACR 700
Score = 19.6 bits (39), Expect = 0.97
Identities = 8/20 (40%), Positives = 13/20 (65%), Gaps = 0/20 (0%)
Query 208 SLNRDTQSTGISNQNTDTKI 227
+LN DT+++ SN T + I
Sbjct 324 ALNSDTENSNASNTRTRSGI 343
Score = 19.6 bits (39), Expect = 0.97
Identities = 8/20 (40%), Positives = 11/20 (55%), Gaps = 0/20 (0%)
Query 261 LIDRPKKNNPTEIRSKFRES 280
LIDR NP ++ +F S
Sbjct 685 LIDRALTLNPLDVACRFNRS 704
Score = 18.1 bits (35), Expect = 2.9
Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 0/16 (0%)
Query 34 AAIEQSDYRPGNPIYD 49
A EQS+YR I D
Sbjct 502 ACFEQSEYRECRNILD 517
Score = 16.9 bits (32), Expect = 6.6
Identities = 5/16 (31%), Positives = 8/16 (50%), Gaps = 0/16 (0%)
Query 277 FRESVTAGVTGYQEWY 292
FR ++ Y+ WY
Sbjct 618 FRSALLLSPRDYRAWY 633
Lambda K H a alpha
0.320 0.137 0.408 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 799712
Database: 8baff85f9c3e4cd8ca8866299440eae3.SwissProt.fasta
Posted date: Jun 3, 2024 11:17 AM
Number of letters in database: 2,273
Number of sequences in database: 3
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
