Comparative Genomics

ACIAD1251 / SwissProt Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 4195fdc7564cdddc913f8d54586e686b.SwissProt.fasta
           33 sequences; 2,305 total letters



Query= ACIAD1251

Length=71
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q6FCT4 Translational regulator CsrA [Acinetobacter baylyi (strain...  136     6e-48
A3M3S7 Translational regulator CsrA [Acinetobacter baumannii (str...  115     1e-39
B0VL27 Translational regulator CsrA [Acinetobacter baumannii (str...  115     1e-39
B2HWK5 Translational regulator CsrA [Acinetobacter baumannii (str...  115     1e-39
B7I9N8 Translational regulator CsrA [Acinetobacter baumannii (str...  115     1e-39
B7GWX6 Translational regulator CsrA [Acinetobacter baumannii (str...  115     1e-39
A5WFW3 Translational regulator CsrA [Psychrobacter sp. (strain PR...  108     7e-37
Q0VNK4 Translational regulator CsrA [Alcanivorax borkumensis (str...  104     1e-35
B1KPS4 Translational regulator CsrA [Shewanella woodyi (strain AT...  103     3e-35
A8FSV7 Translational regulator CsrA [Shewanella sediminis (strain...  103     3e-35
Q12PX6 Translational regulator CsrA [Shewanella denitrificans (st...  103     5e-35
Q1QA86 Translational regulator CsrA [Psychrobacter cryohalolentis...  103     5e-35
Q4FRP8 Translational regulator CsrA [Psychrobacter arcticus (stra...  103     5e-35
Q085Z8 Translational regulator CsrA [Shewanella frigidimarina (st...  102     9e-35
A9KYF6 Translational regulator CsrA [Shewanella baltica (strain O...  102     9e-35
A6WR14 Translational regulator CsrA [Shewanella baltica (strain O...  102     9e-35
A3D781 Translational regulator CsrA [Shewanella baltica (strain O...  102     9e-35
B8E8U6 Translational regulator CsrA [Shewanella baltica (strain O...  102     9e-35
O85735 Translational regulator CsrA [Serratia marcescens]             102     1e-34
C6DCQ8 Translational regulator CsrA [Pectobacterium carotovorum s...  102     1e-34
Q6D1T1 Translational regulator CsrA [Pectobacterium atrosepticum ...  102     1e-34
P69913 Carbon storage regulator [Escherichia coli (strain K12)]       102     1e-34
A1JK11 Translational regulator CsrA [Yersinia enterocolitica sero...  102     1e-34
P69917 Translational regulator CsrA [Salmonella typhimurium (stra...  102     1e-34
Q93MI1 Translational regulator CsrA [Proteus mirabilis]               101     3e-34
P0DKY7 Translational regulator CsrA [Pectobacterium carotovorum s...  100     5e-34
O69078 Translational regulator CsrA [Pseudomonas aeruginosa (stra...  100     1e-33
P0DPC3 Translational regulator CsrA1 [Pseudomonas protegens (stra...  85.1    9e-28
P69920 Translational regulator CsrA2 [Pseudomonas protegens (stra...  84.7    1e-27
A4ISU9 Translational regulator CsrA [Geobacillus thermodenitrific...  70.1    1e-21
P33911 Translational regulator CsrA [Bacillus subtilis (strain 168)]  63.2    6e-19
Q0P9F1 Translational regulator CsrA [Campylobacter jejuni subsp. ...  45.1    8e-12
P0DPD4 Translational regulator CsrA [Campylobacter jejuni subsp. ...  45.1    8e-12


>Q6FCT4 Translational regulator CsrA [Acinetobacter baylyi (strain 
ATCC 33305 / BD413 / ADP1)]
Length=70

 Score = 136 bits (342),  Expect = 6e-48
 Identities = 70/70 (100%), Positives = 70/70 (100%), Gaps = 0/70 (0%)

Query  1   MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHERAMHVI  60
           MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHERAMHVI
Sbjct  1   MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHERAMHVI  60

Query  61  LAKIMDSTSL  70
           LAKIMDSTSL
Sbjct  61  LAKIMDSTSL  70


>A3M3S7 Translational regulator CsrA [Acinetobacter baumannii 
(strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377)]
Length=84

 Score = 115 bits (289),  Expect = 1e-39
 Identities = 58/58 (100%), Positives = 58/58 (100%), Gaps = 0/58 (0%)

Query  1   MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHERAMH  58
           MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHERAMH
Sbjct  1   MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHERAMH  58


>B0VL27 Translational regulator CsrA [Acinetobacter baumannii 
(strain SDF)]
Length=84

 Score = 115 bits (289),  Expect = 1e-39
 Identities = 58/58 (100%), Positives = 58/58 (100%), Gaps = 0/58 (0%)

Query  1   MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHERAMH  58
           MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHERAMH
Sbjct  1   MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHERAMH  58


>B2HWK5 Translational regulator CsrA [Acinetobacter baumannii 
(strain ACICU)]
Length=84

 Score = 115 bits (289),  Expect = 1e-39
 Identities = 58/58 (100%), Positives = 58/58 (100%), Gaps = 0/58 (0%)

Query  1   MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHERAMH  58
           MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHERAMH
Sbjct  1   MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHERAMH  58


>B7I9N8 Translational regulator CsrA [Acinetobacter baumannii 
(strain AB0057)]
Length=84

 Score = 115 bits (289),  Expect = 1e-39
 Identities = 58/58 (100%), Positives = 58/58 (100%), Gaps = 0/58 (0%)

Query  1   MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHERAMH  58
           MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHERAMH
Sbjct  1   MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHERAMH  58


>B7GWX6 Translational regulator CsrA [Acinetobacter baumannii 
(strain AB307-0294)]
Length=84

 Score = 115 bits (289),  Expect = 1e-39
 Identities = 58/58 (100%), Positives = 58/58 (100%), Gaps = 0/58 (0%)

Query  1   MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHERAMH  58
           MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHERAMH
Sbjct  1   MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHERAMH  58


>A5WFW3 Translational regulator CsrA [Psychrobacter sp. (strain 
PRwf-1)]
Length=81

 Score = 108 bits (270),  Expect = 7e-37
 Identities = 52/57 (91%), Positives = 57/57 (100%), Gaps = 0/57 (0%)

Query  1   MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHERAM  57
           MLILTRRVGETLM+GD+VSVTVLGVKGNQVRIGVNAPK+++VHREEIYQRIQHERAM
Sbjct  1   MLILTRRVGETLMVGDEVSVTVLGVKGNQVRIGVNAPKDIAVHREEIYQRIQHERAM  57


>Q0VNK4 Translational regulator CsrA [Alcanivorax borkumensis 
(strain ATCC 700651 / DSM 11573 / NCIMB 13689 / SK2)]
Length=62

 Score = 104 bits (260),  Expect = 1e-35
 Identities = 50/56 (89%), Positives = 56/56 (100%), Gaps = 0/56 (0%)

Query  1   MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHERA  56
           MLILTRRVGETLM+GD+V+VTVLGVKGNQVRIGVNAPKEV+VHREEIYQRIQHE++
Sbjct  1   MLILTRRVGETLMVGDEVTVTVLGVKGNQVRIGVNAPKEVAVHREEIYQRIQHEKS  56


>B1KPS4 Translational regulator CsrA [Shewanella woodyi (strain 
ATCC 51908 / MS32)]
Length=65

 Score = 103 bits (258),  Expect = 3e-35
 Identities = 52/56 (93%), Positives = 55/56 (98%), Gaps = 0/56 (0%)

Query  1   MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHERA  56
           MLILTRRVGETLMIGD+V+VTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQ E+A
Sbjct  1   MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQSEKA  56


>A8FSV7 Translational regulator CsrA [Shewanella sediminis (strain 
HAW-EB3)]
Length=65

 Score = 103 bits (258),  Expect = 3e-35
 Identities = 52/56 (93%), Positives = 55/56 (98%), Gaps = 0/56 (0%)

Query  1   MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHERA  56
           MLILTRRVGETLMIGD+V+VTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQ E+A
Sbjct  1   MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQSEKA  56


>Q12PX6 Translational regulator CsrA [Shewanella denitrificans 
(strain OS217 / ATCC BAA-1090 / DSM 15013)]
Length=65

 Score = 103 bits (257),  Expect = 5e-35
 Identities = 51/56 (91%), Positives = 56/56 (100%), Gaps = 0/56 (0%)

Query  1   MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHERA  56
           MLILTRRVGETLMIGD+V+VTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQ+E++
Sbjct  1   MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQNEKS  56


>Q1QA86 Translational regulator CsrA [Psychrobacter cryohalolentis 
(strain ATCC BAA-1226 / DSM 17306 / VKM B-2378 / K5)]
Length=81

 Score = 103 bits (258),  Expect = 5e-35
 Identities = 50/57 (88%), Positives = 56/57 (98%), Gaps = 0/57 (0%)

Query  1   MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHERAM  57
           MLILTRRVGETLMIGD+VSVTVLGVKGNQVRIGV+APK+++VHREEIYQRIQHER +
Sbjct  1   MLILTRRVGETLMIGDEVSVTVLGVKGNQVRIGVDAPKDIAVHREEIYQRIQHERTV  57


>Q4FRP8 Translational regulator CsrA [Psychrobacter arcticus (strain 
DSM 17307 / VKM B-2377 / 273-4)]
Length=81

 Score = 103 bits (258),  Expect = 5e-35
 Identities = 50/57 (88%), Positives = 56/57 (98%), Gaps = 0/57 (0%)

Query  1   MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHERAM  57
           MLILTRRVGETLMIGD+VSVTVLGVKGNQVRIGV+APK+++VHREEIYQRIQHER +
Sbjct  1   MLILTRRVGETLMIGDEVSVTVLGVKGNQVRIGVDAPKDIAVHREEIYQRIQHERTI  57


>Q085Z8 Translational regulator CsrA [Shewanella frigidimarina 
(strain NCIMB 400)]
Length=65

 Score = 102 bits (255),  Expect = 9e-35
 Identities = 51/56 (91%), Positives = 55/56 (98%), Gaps = 0/56 (0%)

Query  1   MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHERA  56
           MLILTRRVGETLMIGD+V+VTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQ E++
Sbjct  1   MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQSEKS  56


>A9KYF6 Translational regulator CsrA [Shewanella baltica (strain 
OS195)]
Length=65

 Score = 102 bits (255),  Expect = 9e-35
 Identities = 51/56 (91%), Positives = 55/56 (98%), Gaps = 0/56 (0%)

Query  1   MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHERA  56
           MLILTRRVGETLMIGD+V+VTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQ E++
Sbjct  1   MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQSEKS  56


>A6WR14 Translational regulator CsrA [Shewanella baltica (strain 
OS185)]
Length=65

 Score = 102 bits (255),  Expect = 9e-35
 Identities = 51/56 (91%), Positives = 55/56 (98%), Gaps = 0/56 (0%)

Query  1   MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHERA  56
           MLILTRRVGETLMIGD+V+VTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQ E++
Sbjct  1   MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQSEKS  56


>A3D781 Translational regulator CsrA [Shewanella baltica (strain 
OS155 / ATCC BAA-1091)]
Length=65

 Score = 102 bits (255),  Expect = 9e-35
 Identities = 51/56 (91%), Positives = 55/56 (98%), Gaps = 0/56 (0%)

Query  1   MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHERA  56
           MLILTRRVGETLMIGD+V+VTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQ E++
Sbjct  1   MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQSEKS  56


>B8E8U6 Translational regulator CsrA [Shewanella baltica (strain 
OS223)]
Length=65

 Score = 102 bits (255),  Expect = 9e-35
 Identities = 51/56 (91%), Positives = 55/56 (98%), Gaps = 0/56 (0%)

Query  1   MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHERA  56
           MLILTRRVGETLMIGD+V+VTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQ E++
Sbjct  1   MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQSEKS  56


>O85735 Translational regulator CsrA [Serratia marcescens]
Length=69

 Score = 102 bits (255),  Expect = 1e-34
 Identities = 52/61 (85%), Positives = 57/61 (93%), Gaps = 0/61 (0%)

Query  1   MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHERAMHVI  60
           MLILTRRVGETLMIGD+V+VTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQ E++   +
Sbjct  1   MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQAEKSADDL  60

Query  61  L  61
           L
Sbjct  61  L  61


>C6DCQ8 Translational regulator CsrA [Pectobacterium carotovorum 
subsp. carotovorum (strain PC1)]
Length=61

 Score = 102 bits (254),  Expect = 1e-34
 Identities = 51/56 (91%), Positives = 55/56 (98%), Gaps = 0/56 (0%)

Query  1   MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHERA  56
           MLILTRRVGETLMIGD+V+VTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQ E++
Sbjct  1   MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQAEKS  56


>Q6D1T1 Translational regulator CsrA [Pectobacterium atrosepticum 
(strain SCRI 1043 / ATCC BAA-672)]
Length=61

 Score = 102 bits (254),  Expect = 1e-34
 Identities = 51/56 (91%), Positives = 55/56 (98%), Gaps = 0/56 (0%)

Query  1   MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHERA  56
           MLILTRRVGETLMIGD+V+VTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQ E++
Sbjct  1   MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQAEKS  56


>P69913 Carbon storage regulator [Escherichia coli (strain K12)]
Length=61

 Score = 102 bits (254),  Expect = 1e-34
 Identities = 51/56 (91%), Positives = 55/56 (98%), Gaps = 0/56 (0%)

Query  1   MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHERA  56
           MLILTRRVGETLMIGD+V+VTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQ E++
Sbjct  1   MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQAEKS  56


>A1JK11 Translational regulator CsrA [Yersinia enterocolitica 
serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)]
Length=61

 Score = 102 bits (254),  Expect = 1e-34
 Identities = 51/56 (91%), Positives = 55/56 (98%), Gaps = 0/56 (0%)

Query  1   MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHERA  56
           MLILTRRVGETLMIGD+V+VTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQ E++
Sbjct  1   MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQAEKS  56


>P69917 Translational regulator CsrA [Salmonella typhimurium (strain 
LT2 / SGSC1412 / ATCC 700720)]
Length=61

 Score = 102 bits (254),  Expect = 1e-34
 Identities = 51/56 (91%), Positives = 55/56 (98%), Gaps = 0/56 (0%)

Query  1   MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHERA  56
           MLILTRRVGETLMIGD+V+VTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQ E++
Sbjct  1   MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQAEKS  56


>Q93MI1 Translational regulator CsrA [Proteus mirabilis]
Length=62

 Score = 101 bits (251),  Expect = 3e-34
 Identities = 51/55 (93%), Positives = 53/55 (96%), Gaps = 0/55 (0%)

Query  1   MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHER  55
           MLILTRRVGETLMIGD V+VTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQ E+
Sbjct  1   MLILTRRVGETLMIGDDVTVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQAEK  55


>P0DKY7 Translational regulator CsrA [Pectobacterium carotovorum 
subsp. carotovorum]
Length=61

 Score = 100 bits (250),  Expect = 5e-34
 Identities = 50/56 (89%), Positives = 55/56 (98%), Gaps = 0/56 (0%)

Query  1   MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHERA  56
           MLILTRRVGETL+IGD+V+VTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQ E++
Sbjct  1   MLILTRRVGETLIIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQAEKS  56


>O69078 Translational regulator CsrA [Pseudomonas aeruginosa (strain 
ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 
12228 / 1C / PRS 101 / PAO1)]
Length=61

 Score = 100 bits (248),  Expect = 1e-33
 Identities = 49/55 (89%), Positives = 53/55 (96%), Gaps = 0/55 (0%)

Query  1   MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHER  55
           MLILTRRVGETLM+GD V+VTVLGVKGNQVRIGVNAPKEV+VHREEIYQRIQ E+
Sbjct  1   MLILTRRVGETLMVGDDVTVTVLGVKGNQVRIGVNAPKEVAVHREEIYQRIQKEK  55


>P0DPC3 Translational regulator CsrA1 [Pseudomonas protegens (strain 
DSM 19095 / LMG 27888 / CFBP 6595 / CHA0)]
Length=64

 Score = 85.1 bits (209),  Expect = 9e-28
 Identities = 38/52 (73%), Positives = 48/52 (92%), Gaps = 0/52 (0%)

Query  1   MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQ  52
           MLILTR+VGE++ IGD +++T+LGV G QVRIG+NAPK+V+VHREEIYQRIQ
Sbjct  1   MLILTRKVGESINIGDDITITILGVSGQQVRIGINAPKDVAVHREEIYQRIQ  52


>P69920 Translational regulator CsrA2 [Pseudomonas protegens (strain 
DSM 19095 / LMG 27888 / CFBP 6595 / CHA0)]
Length=62

 Score = 84.7 bits (208),  Expect = 1e-27
 Identities = 43/56 (77%), Positives = 51/56 (91%), Gaps = 1/56 (2%)

Query  1   MLILTRRVGETLMIGD-QVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHER  55
           MLILTRR  E+L+IGD +++VTVLGVKGNQVRIGVNAPKEV+VHREEIY RI+ E+
Sbjct  1   MLILTRRCAESLIIGDGEITVTVLGVKGNQVRIGVNAPKEVAVHREEIYLRIKKEK  56


>A4ISU9 Translational regulator CsrA [Geobacillus thermodenitrificans 
(strain NG80-2)]
Length=82

 Score = 70.1 bits (170),  Expect = 1e-21
 Identities = 29/54 (54%), Positives = 43/54 (80%), Gaps = 0/54 (0%)

Query  1   MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHE  54
           ML+LTR++ E + IGD + +TVL ++G+QV++G+NAPK V +HR+EIY  IQ E
Sbjct  1   MLVLTRKLKEAIQIGDDIEITVLAIQGDQVKLGINAPKHVEIHRKEIYLAIQAE  54


>P33911 Translational regulator CsrA [Bacillus subtilis (strain 
168)]
Length=74

 Score = 63.2 bits (152),  Expect = 6e-19
 Identities = 25/54 (46%), Positives = 41/54 (76%), Gaps = 0/54 (0%)

Query  1   MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHE  54
           ML+L+R++ E + IG  + V V+ V+G+QV++G++APK + +HR+EIY  IQ E
Sbjct  1   MLVLSRKINEAIQIGADIEVKVIAVEGDQVKLGIDAPKHIDIHRKEIYLTIQEE  54


>Q0P9F1 Translational regulator CsrA [Campylobacter jejuni subsp. 
jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)]
Length=75

 Score = 45.1 bits (105),  Expect = 8e-12
 Identities = 19/60 (32%), Positives = 38/60 (63%), Gaps = 0/60 (0%)

Query  1   MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHERAMHVI  60
           MLIL+R+  E+++IG+ + + V+       +IG+ APK + + R+E+ Q+++ E    V+
Sbjct  1   MLILSRKENESIIIGEGIEIKVVQTGKGYAKIGIEAPKSLMILRKELVQQVKDENLHSVV  60


>P0DPD4 Translational regulator CsrA [Campylobacter jejuni subsp. 
jejuni serotype O:6 (strain 81116 / NCTC 11828)]
Length=75

 Score = 45.1 bits (105),  Expect = 8e-12
 Identities = 19/60 (32%), Positives = 38/60 (63%), Gaps = 0/60 (0%)

Query  1   MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHERAMHVI  60
           MLIL+R+  E+++IG+ + + V+       +IG+ APK + + R+E+ Q+++ E    V+
Sbjct  1   MLILSRKENESIIIGEGIEIKVVQTGKGYAKIGIEAPKSLMILRKELVQQVKDENLHSVV  60



Lambda      K        H        a         alpha
   0.331    0.142    0.390    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 65115


  Database: 4195fdc7564cdddc913f8d54586e686b.SwissProt.fasta
    Posted date:  Jun 3, 2024  7:51 PM
  Number of letters in database: 2,305
  Number of sequences in database:  33



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40