BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: e6024105dc30258e1468588ea299031c.SwissProt.fasta
           2 sequences; 2,558 total letters



Query= ACIAD1267

Length=147
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q28034 Glucosidase 2 subunit beta [Bos taurus]                        35.0    2e-06
P53804 E3 ubiquitin-protein ligase TTC3 [Homo sapiens]                34.7    3e-06


>Q28034 Glucosidase 2 subunit beta [Bos taurus]
Length=533

 Score = 35.0 bits (79),  Expect = 2e-06
 Identities = 17/58 (29%), Positives = 33/58 (57%), Gaps = 0/58 (0%)

Query  37   EQSSQSMTVTAEMVDAVKKDVQLPVEVQKRQNQKLAEEYSQERKQQNIRSVALSAYEE  94
            +   +S+    E++  +K++ + P E  K Q+++L EE     K+Q  R +A SA++E
Sbjct  162  QAGKKSLEDQVEVLRTLKEEAEKPEEAAKDQHRRLWEEQQAISKEQRERELAASAFQE  219


 Score = 20.0 bits (40),  Expect = 0.22
 Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 11/67 (16%)

Query  64   QKRQNQKLAEEYSQERKQQNIRSVALSAYEEQKKTADVSQTGKFVYHPVPVVRGTSTDTS  123
            Q+ +N+    E S +  +++IR++      EQ+ + D    G+F Y     +     + +
Sbjct  376  QEARNKFEEAERSLKDMEESIRNL------EQEISFDFGPNGEFAY-----LYSQCYELT  424

Query  124  FNEFLFR  130
             NE+++R
Sbjct  425  TNEYVYR  431


>P53804 E3 ubiquitin-protein ligase TTC3 [Homo sapiens]
Length=2025

 Score = 34.7 bits (78),  Expect = 3e-06
 Identities = 20/56 (36%), Positives = 35/56 (63%), Gaps = 4/56 (7%)

Query  53   VKKDVQLPVEVQKRQNQKLAEEYSQERKQQNIRSVALSAYEEQKKTADVSQTGKFV  108
            +K+D +L  ++QK++ +KLA    QER ++++R       EEQK+T D  Q  +F+
Sbjct  765  LKEDKKLKRKIQKKEAKKLA----QERMEEDLRESNPPKNEEQKETVDNVQRCQFL  816


 Score = 21.6 bits (44),  Expect = 0.073
 Identities = 10/40 (25%), Positives = 23/40 (58%), Gaps = 10/40 (25%)

Query  69    QKLAEEYSQERKQQNIRSVALSAYEEQKKTADVSQTGKFV  108
             +K+A    ++RK++NI++          K  ++S+ G++V
Sbjct  1172  KKVASRLKKKRKKKNIKT----------KVEEISKAGEYV  1201


 Score = 20.4 bits (41),  Expect = 0.17
 Identities = 11/30 (37%), Positives = 15/30 (50%), Gaps = 0/30 (0%)

Query  111   PVPVVRGTSTDTSFNEFLFRGIDASGARGD  140
             P+ V  GT++ TS NE +    D S    D
Sbjct  1033  PMLVGSGTTSVTSNNEIITSSEDHSNRNSD  1062


 Score = 16.9 bits (32),  Expect = 2.3
 Identities = 12/43 (28%), Positives = 16/43 (37%), Gaps = 3/43 (7%)

Query  84    IRSVALSAYEEQKKTADVSQTGKFVYHP---VPVVRGTSTDTS  123
             ++ V     +EQKK        K  Y P    PV R +    S
Sbjct  1887  VQRVTEHILDEQKKKKPNPGKDKRTYEPSSATPVTRSSQGSPS  1929


 Score = 16.2 bits (30),  Expect = 4.0
 Identities = 7/19 (37%), Positives = 11/19 (58%), Gaps = 0/19 (0%)

Query  61   VEVQKRQNQKLAEEYSQER  79
            +E  +    K  EE+S+ER
Sbjct  228  IEEGELMKMKGNEEFSKER  246



Lambda      K        H        a         alpha
   0.316    0.129    0.345    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 275946


  Database: e6024105dc30258e1468588ea299031c.SwissProt.fasta
    Posted date:  May 20, 2024  8:22 PM
  Number of letters in database: 2,558
  Number of sequences in database:  2



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40