BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 4870778db0f298d0a9356b772207d924.SwissProt.fasta
17 sequences; 14,505 total letters
Query= ACIAD1363
Length=759
Score E
Sequences producing significant alignments: (Bits) Value
P0ABI0 ATP-dependent Clp protease ATP-binding subunit ClpA [Esche... 887 0.0
P0ABI1 ATP-dependent Clp protease ATP-binding subunit ClpA [Esche... 887 0.0
P0ABH9 ATP-dependent Clp protease ATP-binding subunit ClpA [Esche... 887 0.0
P05444 ClpA homolog protein [Fuscovulum blasticum] 825 0.0
Q8EU05 Chaperone protein ClpB [Oceanobacillus iheyensis (strain D... 541 0.0
P37571 Negative regulator of genetic competence ClpC/MecB [Bacill... 540 0.0
A0R574 ATP-dependent Clp protease ATP-binding subunit ClpC1 [Myco... 529 3e-180
Q9TM05 ATP-dependent Clp protease ATP-binding subunit ClpA homolo... 526 6e-179
P31541 ATP-dependent Clp protease ATP-binding subunit ClpA homolo... 526 3e-178
P31542 ATP-dependent Clp protease ATP-binding subunit ClpA homolo... 523 6e-177
Q9FI56 Chaperone protein ClpC1, chloroplastic [Arabidopsis thaliana] 517 2e-174
Q7F9I1 Chaperone protein ClpC1, chloroplastic [Oryza sativa subsp... 516 2e-174
P35100 Chaperone protein ClpC, chloroplastic [Pisum sativum] 512 9e-173
Q8YM56 Chaperone protein ClpB 2 [Nostoc sp. (strain PCC 7120 / SA... 308 1e-95
Q89UL2 Chaperone protein ClpB [Bradyrhizobium diazoefficiens (str... 302 2e-93
Q8YJ91 Chaperone protein ClpB [Brucella melitensis biotype 1 (str... 298 7e-92
Q7CEG6 Chaperone protein ClpB [Brucella suis biovar 1 (strain 1330)] 298 1e-91
>P0ABI0 ATP-dependent Clp protease ATP-binding subunit ClpA [Escherichia
coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)]
Length=758
Score = 887 bits (2292), Expect = 0.0
Identities = 454/740 (61%), Positives = 564/740 (76%), Gaps = 4/740 (1%)
Query 1 MLSRQLEVSLRLAVSMARQKRHEFLTVEHLLLALLDNDSAVNALKACGADIVSLRKELEE 60
ML+++LE+SL +A + AR+ RHEF+TVEHLLLALL N SA AL+AC D+V+LR+ELE
Sbjct 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60
Query 61 YVEQHTPKLGENSEQAP-HPTESFDRILQRAIFHVQSSGGDRTVEGADVLVAMYSERDSF 119
++EQ TP L + E+ PT SF R+LQRA+FHVQSSG + V GA+VLVA++SE++S
Sbjct 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNE-VTGANVLVAIFSEQESQ 119
Query 120 AVYLLKRHQINRLTLTQYLSHGTRKEDVQSEEEVEDIEGESSSSSNAGPLEQFTLNLNNE 179
A YLL++H+++RL + ++SHGTRK++ + + +E FT NLN
Sbjct 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179
Query 180 ALKGKTDPLIGREKEIERTAQILCRRRKNNPLLVGDPGVGKTSIAEGLAWLIVNGKAPKP 239
A G DPLIGREKE+ER Q+LCRRRKNNPLLVG+ GVGKT+IAEGLAW IV G P+
Sbjct 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239
Query 240 LAHAEVYSLDIGALVAGTKYRGDFEKRLKQLLNALKKNPNAILFIDEIHMIIGAGSSMGS 299
+A +YSLDIG+L+AGTKYRGDFEKR K LL L+++ N+ILFIDEIH IIGAG++ G
Sbjct 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299
Query 300 TMDASNLIKPALANGTLRCIGSTTFQEYRQVFEKDHALSRRFQKIDVNEPSITETIEILR 359
+DA+NLIKP L++G +R IGSTT+QE+ +FEKD AL+RRFQKID+ EPSI ET++I+
Sbjct 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359
Query 360 GLKTKFEDFHHVEYDDKALVAAVELSSKFINDRFLPDKAIDVIDEAGAQRRLK-AEKDGS 418
GLK K+E H V Y KA+ AAVEL+ K+INDR LPDKAIDVIDEAGA+ RL K
Sbjct 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419
Query 419 LITTENIEDIVSKIARIPPKTVSKDDKAVLEYLERDLKRVVFGQDEAITALASAIKLSRA 478
+ +IE +V++IARIP K+VS+ D+ L+ L LK +VFGQD+AI AL AIK++RA
Sbjct 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARA 479
Query 479 GLKAPDKPVGNFVFAGPTGVGKTEVTKQLAKLLGVELVRFDMSEYMERHAVSRLIGAPPG 538
GL KPVG+F+FAGPTGVGKTEVT QL+K LG+EL+RFDMSEYMERH VSRLIGAPPG
Sbjct 480 GLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPG 539
Query 539 YVGYDQGGLLTDAIHKNPHCVLLLDEIEKAHPDVFNLLLQVMDHGALTDNNGRKSDFRNV 598
YVG+DQGGLLTDA+ K+PH VLLLDEIEKAHPDVFN+LLQVMD+G LTDNNGRK+DFRNV
Sbjct 540 YVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNV 599
Query 599 IIVLTTNIGAESISRTSIGFTEQDNSNDNQEAMKRAFSPEFRNRLDGVIQFKSLPNAVIE 658
++V+TTN G R SIG QDNS D E +K+ F+PEFRNRLD +I F L VI
Sbjct 600 VLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIH 659
Query 659 SVVDKFLTELQAQLDDKKVVLEVDQSARDWLSANGYDRLMGARPMQRLIQEHLKKPLAEM 718
VVDKF+ ELQ QLD K V LEV Q AR+WL+ GYDR MGARPM R+IQ++LKKPLA
Sbjct 660 QVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANE 719
Query 719 ILFGELADHGGNVAVSVKKE 738
+LFG L D GG V V++ KE
Sbjct 720 LLFGSLVD-GGQVTVALDKE 738
>P0ABI1 ATP-dependent Clp protease ATP-binding subunit ClpA [Escherichia
coli O157:H7]
Length=758
Score = 887 bits (2292), Expect = 0.0
Identities = 454/740 (61%), Positives = 564/740 (76%), Gaps = 4/740 (1%)
Query 1 MLSRQLEVSLRLAVSMARQKRHEFLTVEHLLLALLDNDSAVNALKACGADIVSLRKELEE 60
ML+++LE+SL +A + AR+ RHEF+TVEHLLLALL N SA AL+AC D+V+LR+ELE
Sbjct 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60
Query 61 YVEQHTPKLGENSEQAP-HPTESFDRILQRAIFHVQSSGGDRTVEGADVLVAMYSERDSF 119
++EQ TP L + E+ PT SF R+LQRA+FHVQSSG + V GA+VLVA++SE++S
Sbjct 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNE-VTGANVLVAIFSEQESQ 119
Query 120 AVYLLKRHQINRLTLTQYLSHGTRKEDVQSEEEVEDIEGESSSSSNAGPLEQFTLNLNNE 179
A YLL++H+++RL + ++SHGTRK++ + + +E FT NLN
Sbjct 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179
Query 180 ALKGKTDPLIGREKEIERTAQILCRRRKNNPLLVGDPGVGKTSIAEGLAWLIVNGKAPKP 239
A G DPLIGREKE+ER Q+LCRRRKNNPLLVG+ GVGKT+IAEGLAW IV G P+
Sbjct 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239
Query 240 LAHAEVYSLDIGALVAGTKYRGDFEKRLKQLLNALKKNPNAILFIDEIHMIIGAGSSMGS 299
+A +YSLDIG+L+AGTKYRGDFEKR K LL L+++ N+ILFIDEIH IIGAG++ G
Sbjct 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299
Query 300 TMDASNLIKPALANGTLRCIGSTTFQEYRQVFEKDHALSRRFQKIDVNEPSITETIEILR 359
+DA+NLIKP L++G +R IGSTT+QE+ +FEKD AL+RRFQKID+ EPSI ET++I+
Sbjct 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359
Query 360 GLKTKFEDFHHVEYDDKALVAAVELSSKFINDRFLPDKAIDVIDEAGAQRRLK-AEKDGS 418
GLK K+E H V Y KA+ AAVEL+ K+INDR LPDKAIDVIDEAGA+ RL K
Sbjct 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419
Query 419 LITTENIEDIVSKIARIPPKTVSKDDKAVLEYLERDLKRVVFGQDEAITALASAIKLSRA 478
+ +IE +V++IARIP K+VS+ D+ L+ L LK +VFGQD+AI AL AIK++RA
Sbjct 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARA 479
Query 479 GLKAPDKPVGNFVFAGPTGVGKTEVTKQLAKLLGVELVRFDMSEYMERHAVSRLIGAPPG 538
GL KPVG+F+FAGPTGVGKTEVT QL+K LG+EL+RFDMSEYMERH VSRLIGAPPG
Sbjct 480 GLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPG 539
Query 539 YVGYDQGGLLTDAIHKNPHCVLLLDEIEKAHPDVFNLLLQVMDHGALTDNNGRKSDFRNV 598
YVG+DQGGLLTDA+ K+PH VLLLDEIEKAHPDVFN+LLQVMD+G LTDNNGRK+DFRNV
Sbjct 540 YVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNV 599
Query 599 IIVLTTNIGAESISRTSIGFTEQDNSNDNQEAMKRAFSPEFRNRLDGVIQFKSLPNAVIE 658
++V+TTN G R SIG QDNS D E +K+ F+PEFRNRLD +I F L VI
Sbjct 600 VLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIH 659
Query 659 SVVDKFLTELQAQLDDKKVVLEVDQSARDWLSANGYDRLMGARPMQRLIQEHLKKPLAEM 718
VVDKF+ ELQ QLD K V LEV Q AR+WL+ GYDR MGARPM R+IQ++LKKPLA
Sbjct 660 QVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANE 719
Query 719 ILFGELADHGGNVAVSVKKE 738
+LFG L D GG V V++ KE
Sbjct 720 LLFGSLVD-GGQVTVALDKE 738
>P0ABH9 ATP-dependent Clp protease ATP-binding subunit ClpA [Escherichia
coli (strain K12)]
Length=758
Score = 887 bits (2292), Expect = 0.0
Identities = 454/740 (61%), Positives = 564/740 (76%), Gaps = 4/740 (1%)
Query 1 MLSRQLEVSLRLAVSMARQKRHEFLTVEHLLLALLDNDSAVNALKACGADIVSLRKELEE 60
ML+++LE+SL +A + AR+ RHEF+TVEHLLLALL N SA AL+AC D+V+LR+ELE
Sbjct 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60
Query 61 YVEQHTPKLGENSEQAP-HPTESFDRILQRAIFHVQSSGGDRTVEGADVLVAMYSERDSF 119
++EQ TP L + E+ PT SF R+LQRA+FHVQSSG + V GA+VLVA++SE++S
Sbjct 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNE-VTGANVLVAIFSEQESQ 119
Query 120 AVYLLKRHQINRLTLTQYLSHGTRKEDVQSEEEVEDIEGESSSSSNAGPLEQFTLNLNNE 179
A YLL++H+++RL + ++SHGTRK++ + + +E FT NLN
Sbjct 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179
Query 180 ALKGKTDPLIGREKEIERTAQILCRRRKNNPLLVGDPGVGKTSIAEGLAWLIVNGKAPKP 239
A G DPLIGREKE+ER Q+LCRRRKNNPLLVG+ GVGKT+IAEGLAW IV G P+
Sbjct 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239
Query 240 LAHAEVYSLDIGALVAGTKYRGDFEKRLKQLLNALKKNPNAILFIDEIHMIIGAGSSMGS 299
+A +YSLDIG+L+AGTKYRGDFEKR K LL L+++ N+ILFIDEIH IIGAG++ G
Sbjct 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299
Query 300 TMDASNLIKPALANGTLRCIGSTTFQEYRQVFEKDHALSRRFQKIDVNEPSITETIEILR 359
+DA+NLIKP L++G +R IGSTT+QE+ +FEKD AL+RRFQKID+ EPSI ET++I+
Sbjct 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359
Query 360 GLKTKFEDFHHVEYDDKALVAAVELSSKFINDRFLPDKAIDVIDEAGAQRRLK-AEKDGS 418
GLK K+E H V Y KA+ AAVEL+ K+INDR LPDKAIDVIDEAGA+ RL K
Sbjct 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419
Query 419 LITTENIEDIVSKIARIPPKTVSKDDKAVLEYLERDLKRVVFGQDEAITALASAIKLSRA 478
+ +IE +V++IARIP K+VS+ D+ L+ L LK +VFGQD+AI AL AIK++RA
Sbjct 420 TVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARA 479
Query 479 GLKAPDKPVGNFVFAGPTGVGKTEVTKQLAKLLGVELVRFDMSEYMERHAVSRLIGAPPG 538
GL KPVG+F+FAGPTGVGKTEVT QL+K LG+EL+RFDMSEYMERH VSRLIGAPPG
Sbjct 480 GLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPG 539
Query 539 YVGYDQGGLLTDAIHKNPHCVLLLDEIEKAHPDVFNLLLQVMDHGALTDNNGRKSDFRNV 598
YVG+DQGGLLTDA+ K+PH VLLLDEIEKAHPDVFN+LLQVMD+G LTDNNGRK+DFRNV
Sbjct 540 YVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNV 599
Query 599 IIVLTTNIGAESISRTSIGFTEQDNSNDNQEAMKRAFSPEFRNRLDGVIQFKSLPNAVIE 658
++V+TTN G R SIG QDNS D E +K+ F+PEFRNRLD +I F L VI
Sbjct 600 VLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIH 659
Query 659 SVVDKFLTELQAQLDDKKVVLEVDQSARDWLSANGYDRLMGARPMQRLIQEHLKKPLAEM 718
VVDKF+ ELQ QLD K V LEV Q AR+WL+ GYDR MGARPM R+IQ++LKKPLA
Sbjct 660 QVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANE 719
Query 719 ILFGELADHGGNVAVSVKKE 738
+LFG L D GG V V++ KE
Sbjct 720 LLFGSLVD-GGQVTVALDKE 738
>P05444 ClpA homolog protein [Fuscovulum blasticum]
Length=793
Score = 825 bits (2131), Expect = 0.0
Identities = 416/745 (56%), Positives = 553/745 (74%), Gaps = 11/745 (1%)
Query 3 SRQLEVSLRLAVSMARQKRHEFLTVEHLLLALLDNDSAVNALKACGADIVSLRKELEEYV 62
S LE ++ A+++A +RHE T+EHLLLAL+D A +KAC D+ L+K L +++
Sbjct 26 SSTLEQAIHAALALANARRHELATLEHLLLALIDEPDAARVMKACSVDLEDLKKTLTDFI 85
Query 63 EQHTPKLGENSEQAPH-PTESFDRILQRAIFHVQSSGGDRTVEGADVLVAMYSERDSFAV 121
+ L + E + PT +F R++QRA HVQSSG V GA+VLVA+++ER+S A
Sbjct 86 DDDLSTLVTSVEGSEAVPTAAFQRVIQRAAIHVQSSGRTE-VTGANVLVAIFAERESNAA 144
Query 122 YLLKRHQINRLTLTQYLSHGTRKED-------VQSEEEVEDIEGESSSSSNAGPLEQFTL 174
Y L+ + R +++HG K+ VQ +E ++ + + L ++ +
Sbjct 145 YFLQEQDMTRYDAVNFIAHGVAKDPSYGESRPVQGADEPQETPKAEAGEAKESALSKYCV 204
Query 175 NLNNEALKGKTDPLIGREKEIERTAQILCRRRKNNPLLVGDPGVGKTSIAEGLAWLIVNG 234
+LN +A KG DPLIGRE E+ER Q+LCRRRKNNPLLVGDPGVGKT+IAEGLAW I+
Sbjct 205 DLNIKARKGDVDPLIGREAEVERAIQVLCRRRKNNPLLVGDPGVGKTAIAEGLAWKIIKK 264
Query 235 KAPKPLAHAEVYSLDIGALVAGTKYRGDFEKRLKQLLNALKKNPNAILFIDEIHMIIGAG 294
+ P+ L+ A ++SLD+GAL+AGT+YRGDFE+RLK ++ L+ +P+AILFIDEIH +IGAG
Sbjct 265 EVPEVLSGATIFSLDMGALLAGTRYRGDFEERLKAVVKELEDHPDAILFIDEIHTVIGAG 324
Query 295 SSMGSTMDASNLIKPALANGTLRCIGSTTFQEYRQVFEKDHALSRRFQKIDVNEPSITET 354
++ G MDASNL+KPAL G LRC+GSTT++E+RQ FEKD ALSRRFQKIDVNEPS+ +
Sbjct 325 ATSGGAMDASNLLKPALQGGKLRCMGSTTYKEFRQHFEKDRALSRRFQKIDVNEPSVPDA 384
Query 355 IEILRGLKTKFEDFHHVEYDDKALVAAVELSSKFINDRFLPDKAIDVIDEAGAQRRLKAE 414
I+IL GLK FE+ H + Y A+ +AVEL+S++INDR LPD AIDVIDEAGA + L ++
Sbjct 385 IKILMGLKPHFEEHHELRYTADAIKSAVELASRYINDRKLPDSAIDVIDEAGAAQHLVSD 444
Query 415 -KDGSLITTENIEDIVSKIARIPPKTVSKDDKAVLEYLERDLKRVVFGQDEAITALASAI 473
K ++ T+ IE +V+KIARIPP+ VSKDD L LER LKR+VFGQD+AI AL+++I
Sbjct 445 SKRKKVLGTKEIEAVVAKIARIPPRNVSKDDAETLRDLERTLKRLVFGQDKAIEALSASI 504
Query 474 KLSRAGLKAPDKPVGNFVFAGPTGVGKTEVTKQLAKLLGVELVRFDMSEYMERHAVSRLI 533
KL+RAGL+ P+KP+GN++F GPTGVGKTEV KQLA LGVEL+RFDMSEYME+HAVSRLI
Sbjct 505 KLARAGLREPEKPIGNYLFTGPTGVGKTEVAKQLAATLGVELLRFDMSEYMEKHAVSRLI 564
Query 534 GAPPGYVGYDQGGLLTDAIHKNPHCVLLLDEIEKAHPDVFNLLLQVMDHGALTDNNGRKS 593
GAPPGYVG+DQGG+LTD + ++PHCVLLLDEIEKAHPDV+N+LLQVMDHG LTD+NGR
Sbjct 565 GAPPGYVGFDQGGMLTDGVDQHPHCVLLLDEIEKAHPDVYNILLQVMDHGKLTDHNGRAV 624
Query 594 DFRNVIIVLTTNIGAESISRTSIGFTEQDNSNDNQEAMKRAFSPEFRNRLDGVIQFKSLP 653
DFRNVI+++T+N+GA +++ +IGF + + ++ A++R F+PEFRNRLD VI F L
Sbjct 625 DFRNVILIMTSNVGAADMAKEAIGFGRERRTGEDTAAVERTFTPEFRNRLDAVISFAPLG 684
Query 654 NAVIESVVDKFLTELQAQLDDKKVVLEVDQSARDWLSANGYDRLMGARPMQRLIQEHLKK 713
+I VV+KF+ +L+AQL D+ V +E+ A WL GYD MGARP+ R+IQEH+KK
Sbjct 685 REIILQVVEKFVLQLEAQLIDRNVHIELTPEAAAWLGEKGYDDKMGARPLGRVIQEHIKK 744
Query 714 PLAEMILFGELADHGGNVAVSVKKE 738
PLAE +LFG+L GG V V VK +
Sbjct 745 PLAEELLFGKLT-KGGLVKVGVKDD 768
>Q8EU05 Chaperone protein ClpB [Oceanobacillus iheyensis (strain
DSM 14371 / CIP 107618 / JCM 11309 / KCTC 3954 / HTE831)]
Length=809
Score = 541 bits (1393), Expect = 0.0
Identities = 313/809 (39%), Positives = 479/809 (59%), Gaps = 96/809 (12%)
Query 10 LRLAVSMARQKRHEFLTVEHLLLALLDNDS--AVNALKACGADIVSLRKELEEYVEQHTP 67
L L+ A + H + EH+LL L+ A AL++ G ++ +++E+E+ +
Sbjct 14 LALSQEEAVRLGHNNIGTEHILLGLVREGEGIAAKALQSLGLEVSKIQEEVEKLIG---- 69
Query 68 KLGENSEQAPHPTESFDRILQRAIFHVQSSGGDRTVEGADVLVAMYSERDSFAVYLLKRH 127
+G+ Q+ H T ++++ + + G V +L+ + E + A +L
Sbjct 70 -VGKQPTQSIHYTPRAKKVVELSQDEARKLGHSY-VGTEHILLGLIREGEGVAARVL--- 124
Query 128 QINRLTLTQYLSHGTRKEDVQSEEEVEDIEGESSSSSNAGP--LEQFTLNLNNEALKGKT 185
N L ++ + + + S E +G S SNA L+ +L A +GK
Sbjct 125 --NNLGVSLNKARQQVLQLLGSNESQAGRQGRSGQQSNASTPTLDSLARDLTVSAKEGKI 182
Query 186 DPLIGREKEIERTAQILCRRRKNNPLLVGDPGVGKTSIAEGLAWLIVNGKAPKPLAHAEV 245
DP+IGR KEIER Q+L RR KNNP+L+G+PGVGKT++AEGLA I++ + P+ L V
Sbjct 183 DPVIGRSKEIERVIQVLSRRTKNNPVLIGEPGVGKTAVAEGLAQQIIDNEVPETLRDKRV 242
Query 246 YSLDIGALVAGTKYRGDFEKRLKQLLNALKKNPNAILFIDEIHMIIGAGSSMGSTMDASN 305
+LD+G +VAGTKYRG+FE RLK+++ +++ N ILFIDE+H +IGAG + G+ +DASN
Sbjct 243 MTLDMGTVVAGTKYRGEFEDRLKKVMEEIRQAGNIILFIDELHTLIGAGGAEGA-IDASN 301
Query 306 LIKPALANGTLRCIGSTTFQEYRQVFEKDHALSRRFQKIDVNEPSITETIEILRGLKTKF 365
++KP+LA G L+CIG+TT EYR+ EKD AL RRFQ I V+EP++ ETI+IL GL+ ++
Sbjct 302 ILKPSLARGELQCIGATTLDEYRKYIEKDAALERRFQPIQVDEPTLEETIQILNGLRDRY 361
Query 366 EDFHHVEYDDKALVAAVELSSKFINDRFLPDKAIDVIDEAGAQRRLKA------------ 413
E H V D+A+ AA LS ++I DRFLPDKAID+IDEAG++ RL++
Sbjct 362 EAHHRVTITDEAIEAAASLSDRYITDRFLPDKAIDLIDEAGSKVRLRSYTVPPNLKELEQ 421
Query 414 -------EKDGSL---------------------------------------ITTENIED 427
EKD ++ +T E+I
Sbjct 422 KLDEVRKEKDAAVQSQEFEKAASLRDSEQRFREELETTKNQWKEKQGQTDSEVTMEDIAA 481
Query 428 IVSKIARIPPKTVSKDDKAVLEYLERDLKRVVFGQDEAITALASAIKLSRAGLKAPDKPV 487
+VS +P ++KD+ L +E+ L V GQ EA+ A+A AI+ +RAGLK P +P+
Sbjct 482 VVSTWTGVPVSKLTKDETDRLLNMEKILHDRVIGQSEAVNAVAKAIRRARAGLKDPKRPI 541
Query 488 GNFVFAGPTGVGKTEVTKQLAKLLGVE---LVRFDMSEYMERHAVSRLIGAPPGYVGYDQ 544
G+F+F GPTGVGKTE+ + LA+++ + ++R DMSEYMERHA SRL+G+PPGYVGYD+
Sbjct 542 GSFIFLGPTGVGKTELARALAEVMFADEDAMIRIDMSEYMERHATSRLVGSPPGYVGYDE 601
Query 545 GGLLTDAIHKNPHCVLLLDEIEKAHPDVFNLLLQVMDHGALTDNNGRKSDFRNVIIVLTT 604
GG LT+ + + P+ V+LLDE+EKAHP+VFN+LLQV++ G LTD+ GR DFRN +I++T+
Sbjct 602 GGQLTEKVRRKPYSVVLLDEVEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTVIIMTS 661
Query 605 NIGAESISRTS-IGFTEQDNSNDNQ-------EAMKRAFSPEFRNRLDGVIQFKSLPNAV 656
N+GA + R +GF + D + E +K+AF PEF NR+D I F SL
Sbjct 662 NVGASELKRNKYVGFALDNEEKDYKDMKSKVIEELKKAFRPEFLNRIDETIVFHSLEKEH 721
Query 657 IESVVDKFLTELQAQLDDKKVVLEVDQSARDWLSANGYDRLMGARPMQRLIQEHLKKPLA 716
++ +V + +LQ +L ++ + L + A + ++ G+D GARP++R IQ++++ L+
Sbjct 722 MKDIVTLMVQQLQKRLKEQDLHLSLTDKAIEKIANEGFDPEYGARPLRRSIQKNIEDLLS 781
Query 717 EMILFGELADHGGNVAVSVKKEDGKEVGL 745
E +L G +++KE ++GL
Sbjct 782 EELLRG-----------AIEKEQQVKIGL 799
>P37571 Negative regulator of genetic competence ClpC/MecB [Bacillus
subtilis (strain 168)]
Length=810
Score = 540 bits (1390), Expect = 0.0
Identities = 314/805 (39%), Positives = 482/805 (60%), Gaps = 87/805 (11%)
Query 10 LRLAVSMARQKRHEFLTVEHLLLALLDNDS--AVNALKACGADIVSLRKELEEYVEQHTP 67
L LA A + H + EH+LL L+ A AL+A G ++KE+E + +
Sbjct 14 LALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSEKIQKEVESLIGR--- 70
Query 68 KLGENSEQAPHPTESFDRILQRAIFHVQSSGGDRTVEGADVLVAMYSERDSFAVYLLKRH 127
G+ Q H T ++++ ++ + G V +L+ + E + A +L
Sbjct 71 --GQEMSQTIHYTPRAKKVIELSMDEARKLGHSY-VGTEHILLGLIREGEGVAARVL--- 124
Query 128 QINRLTLTQYLSHGTRKEDVQSEEEVEDIEGESSSSSNAGPLEQFTLNLNNEALKGKTDP 187
N L ++ + + + S E G ++S++N L+ +L A + DP
Sbjct 125 --NNLGVSLNKARQQVLQLLGSNETGSSAAG-TNSNANTPTLDSLARDLTAIAKEDSLDP 181
Query 188 LIGREKEIERTAQILCRRRKNNPLLVGDPGVGKTSIAEGLAWLIVNGKAPKPLAHAEVYS 247
+IGR KEI+R ++L RR KNNP+L+G+PGVGKT+IAEGLA I+N + P+ L V +
Sbjct 182 VIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMT 241
Query 248 LDIGALVAGTKYRGDFEKRLKQLLNALKKNPNAILFIDEIHMIIGAGSSMGSTMDASNLI 307
LD+G +VAGTKYRG+FE RLK++++ +++ N ILFIDE+H +IGAG + G+ +DASN++
Sbjct 242 LDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGA-IDASNIL 300
Query 308 KPALANGTLRCIGSTTFQEYRQVFEKDHALSRRFQKIDVNEPSITETIEILRGLKTKFED 367
KP+LA G L+CIG+TT EYR+ EKD AL RRFQ I V++PS+ E+I+IL+GL+ ++E
Sbjct 301 KPSLARGELQCIGATTLDEYRKYIEKDAALERRFQPIQVDQPSVDESIQILQGLRDRYEA 360
Query 368 FHHVEYDDKALVAAVELSSKFINDRFLPDKAIDVIDEAGAQRRLKA-------------- 413
H V D A+ AAV+LS ++I+DRFLPDKAID+IDEAG++ RL++
Sbjct 361 HHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKL 420
Query 414 -----EKDGSL---------------------------------------ITTENIEDIV 429
EKD ++ +T ++I +V
Sbjct 421 DEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVTVDDIAMVV 480
Query 430 SKIARIPPKTVSKDDKAVLEYLERDLKRVVFGQDEAITALASAIKLSRAGLKAPDKPVGN 489
S +P +++ + L +E L V GQDEA+ A+A A++ +RAGLK P +P+G+
Sbjct 481 SSWTGVPVSKIAQTETDKLLNMENILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGS 540
Query 490 FVFAGPTGVGKTEVTKQLAK-LLGVE--LVRFDMSEYMERHAVSRLIGAPPGYVGYDQGG 546
F+F GPTGVGKTE+ + LA+ + G E ++R DMSEYME+H+ SRL+G+PPGYVGYD+GG
Sbjct 541 FIFLGPTGVGKTELARALAESIFGDEESMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGG 600
Query 547 LLTDAIHKNPHCVLLLDEIEKAHPDVFNLLLQVMDHGALTDNNGRKSDFRNVIIVLTTNI 606
LT+ + + P+ V+LLDEIEKAHPDVFN+LLQV++ G LTD+ GR DFRN I+++T+N+
Sbjct 601 QLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNV 660
Query 607 GAESISRTS-IGFTEQDNSNDNQE-------AMKRAFSPEFRNRLDGVIQFKSLPNAVIE 658
GA + R +GF QD + ++++ +KRAF PEF NR+D +I F SL +
Sbjct 661 GASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLT 720
Query 659 SVVDKFLTELQAQLDDKKVVLEVDQSARDWLSANGYDRLMGARPMQRLIQEHLKKPLAEM 718
+V +L +L ++ + +E+ +A+ ++ G D GARP++R IQ+H++ L+E
Sbjct 721 EIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEE 780
Query 719 ILFGELADHGGNVAVSVKKEDGKEV 743
+L G + G ++ + V EDG+ V
Sbjct 781 LLRGNI-HKGQHIVLDV--EDGEFV 802
>A0R574 ATP-dependent Clp protease ATP-binding subunit ClpC1 [Mycolicibacterium
smegmatis (strain ATCC 700084 / mc(2)155)]
Length=848
Score = 529 bits (1363), Expect = 3e-180
Identities = 307/808 (38%), Positives = 468/808 (58%), Gaps = 84/808 (10%)
Query 12 LAVSMARQKRHEFLTVEHLLLALLDNDSAVNA--LKACGADIVSLRKELEEYVEQHTPKL 69
LA AR H ++ EH+LL L+ V A L++ G + +R ++EE + Q
Sbjct 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQQAP 74
Query 70 GENSEQAPHPTESFDRILQRAIFHVQSSGGDRTVEGADVLVAMYSERDSFAVYLLKRHQI 129
+ P + + L+ A+ G + +L+ + E + A +L +
Sbjct 75 SGHIPFTPRAKKVLELSLREAL-----QLGHNYIGTEHILLGLIREGEGVAAQVLVKLGA 129
Query 130 N----RLTLTQYLSHGTRKEDVQSEEEVEDIEGESSSSSNAGPLEQFTLNLNNEALKGKT 185
R + Q LS KE +E GES + S + L+QF NL A++GK
Sbjct 130 ELTRVRQQVIQLLSGYQGKE--AAEAGTGGRGGESGNPSTSLVLDQFGRNLTAAAMEGKL 187
Query 186 DPLIGREKEIERTAQILCRRRKNNPLLVGDPGVGKTSIAEGLAWLIVNGKAPKPLAHAEV 245
DP+IGREKEIER Q+L RR KNNP+L+G+PGVGKT++ EGLA IV+G+ P+ L ++
Sbjct 188 DPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPETLKDKQL 247
Query 246 YSLDIGALVAGTKYRGDFEKRLKQLLNALKKNPNAILFIDEIHMIIGAGSSMGSTMDASN 305
Y+LD+G+LVAG++YRGDFE+RLK++L + + ILFIDE+H ++GAG++ G+ +DA++
Sbjct 248 YTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGA-IDAAS 306
Query 306 LIKPALANGTLRCIGSTTFQEYRQVFEKDHALSRRFQKIDVNEPSITETIEILRGLKTKF 365
++KP LA G L+ IG+TT EYR+ EKD AL RRFQ + V EP++ TIEIL+GL+ ++
Sbjct 307 ILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRY 366
Query 366 EDFHHVEYDDKALVAAVELSSKFINDRFLPDKAIDVIDEAGAQRRL-------------- 411
E H V D A+VAA L+ ++INDRFLPDKAID+IDEAGA+ R+
Sbjct 367 EAHHRVSITDSAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDE 426
Query 412 ----------------------------------KAEKD-----GSLITTENIED----- 427
+AE++ G L ++D
Sbjct 427 KIADARREKESAIDAQDFEKAAALRDKEKQLVAQRAEREKQWRSGDLDVVAEVDDEQIAE 486
Query 428 IVSKIARIPPKTVSKDDKAVLEYLERDLKRVVFGQDEAITALASAIKLSRAGLKAPDKPV 487
++ IP +++++ L +E +L + + GQ++A+ A++ AI+ +RAGLK P +P
Sbjct 487 VLGNWTGIPVFKLTEEETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPS 546
Query 488 GNFVFAGPTGVGKTEVTKQLAKLLGVE---LVRFDMSEYMERHAVSRLIGAPPGYVGYDQ 544
G+F+FAGP+GVGKTE++K LA L + L++ DM E+ +R SRL GAPPGYVGY++
Sbjct 547 GSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEE 606
Query 545 GGLLTDAIHKNPHCVLLLDEIEKAHPDVFNLLLQVMDHGALTDNNGRKSDFRNVIIVLTT 604
GG LT+ + + P V+L DEIEKAH +++N LLQV++ G LTD GR DF+N +++ T+
Sbjct 607 GGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTS 666
Query 605 NIGAESISR-TSIGFTEQDNSNDNQ-------EAMKRAFSPEFRNRLDGVIQFKSLPNAV 656
N+G IS+ +GF++ + N+ + + +K+ F PEF NR+D +I F L
Sbjct 667 NLGTSDISKAVGLGFSQGGSENNYERMKQKVHDELKKHFRPEFLNRIDDIIVFHQLTQDE 726
Query 657 IESVVDKFLTELQAQLDDKKVVLEVDQSARDWLSANGYDRLMGARPMQRLIQEHLKKPLA 716
I +VD + + QL K + LE+ A+ L+ G+D ++GARP++R IQ ++ L+
Sbjct 727 IIQMVDLMIGRVSNQLKTKDMALELSDKAKALLAKRGFDPVLGARPLRRTIQREIEDQLS 786
Query 717 EMILFGELADHGGNVAVSVKKEDGKEVG 744
E ILF E+ G V V V+ DG+ G
Sbjct 787 EKILFEEIGP-GQLVTVDVEGWDGEGQG 813
>Q9TM05 ATP-dependent Clp protease ATP-binding subunit ClpA homolog
[Cyanidium caldarium]
Length=854
Score = 526 bits (1355), Expect = 6e-179
Identities = 318/825 (39%), Positives = 481/825 (58%), Gaps = 96/825 (12%)
Query 10 LRLAVSMARQKRHEFLTVEHLLLALLDNDS--AVNALKACGADIVSLRKELEEYVEQHTP 67
+ LA AR+ H F+ E +LL +L + A ALK+ G + R E+E+ + + +
Sbjct 44 IMLAQEEARRLGHNFVGTEQILLGILGEGTGLAAKALKSMGITLKDARIEVEKIIGRGSG 103
Query 68 KLGENSEQAPHPTESFDRILQRAIFHVQSSGGDRTVEGADVLVAMYSERDSFAVYLLKRH 127
+ P + + ++ + + G +L+ + E + A +L+
Sbjct 104 FVAIEIPFTPRAKKILELAIEESRILTHNYVGTE-----HLLLGLIKEGEGVAARVLENL 158
Query 128 QINRLTLTQYLSHGTRKEDVQSEEEVEDIEGESSSSSNAGPLEQFTLNLNNEALKGKTDP 187
++ L + S+ R SE V G +S S LE+F NL A++GK DP
Sbjct 159 GVD---LPKLRSNIIRMIGETSEVSV----GATSGRSKVPTLEEFGTNLTQMAVEGKLDP 211
Query 188 LIGREKEIERTAQILCRRRKNNPLLVGDPGVGKTSIAEGLAWLIVNGKAPKPLAHAEVYS 247
++GR KEIER QIL RR KNNP+L+G+PGVGKT+IAEGLA I+N + P L +V +
Sbjct 212 VVGRAKEIERVVQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIINNEVPDTLEDKKVIT 271
Query 248 LDIGALVAGTKYRGDFEKRLKQLLNALKKNPNAILFIDEIHMIIGAGSSMGSTMDASNLI 307
LD+ LVAGTKYRG+FE+RLK++++ ++ N IL IDE+H +IGAG++ G+ +DA+N++
Sbjct 272 LDVSLLVAGTKYRGEFEERLKKIMDEIRMADNVILVIDEVHTLIGAGAAEGA-IDAANIL 330
Query 308 KPALANGTLRCIGSTTFQEYRQVFEKDHALSRRFQKIDVNEPSITETIEILRGLKTKFED 367
KPALA G L+CIG+TT +EYR+ EKD AL RRFQ + V EP++ ETIEILRGL+ ++E
Sbjct 331 KPALARGELQCIGATTLEEYRKHIEKDAALERRFQPVMVEEPTVEETIEILRGLRDRYEA 390
Query 368 FHHVEYDDKALVAAVELSSKFINDRFLPDKAIDVIDEAGAQRRLKAEK------------ 415
H ++ D A+VAA +LS ++I DRFLPDKAID++DEA ++ RL K
Sbjct 391 HHRLKISDSAIVAAAKLSDQYIADRFLPDKAIDLVDEASSRVRLMNYKLPPSAEYLDEEL 450
Query 416 ------DGSLITTENIED-------------------------IVSKIARIPPKTVSKDD 444
LI + + E+ I ++A PP V++DD
Sbjct 451 RHIQKIKNELIRSGDFEEASQFREREIEVKVQMAALMKAKKEAIEEELALNPP-IVNEDD 509
Query 445 KA--------------------VLEYLERDLKRVVFGQDEAITALASAIKLSRAGLKAPD 484
A L ++E L + GQ+EA+ A++ AI+ +R GLK P+
Sbjct 510 IANIVSSWTGIPVSKLTKSESEKLLHMEETLHSRIVGQNEAVIAVSKAIRRARVGLKNPN 569
Query 485 KPVGNFVFAGPTGVGKTEVTKQLAK-LLGVE--LVRFDMSEYMERHAVSRLIGAPPGYVG 541
+P+ +F+F+GPTGVGKTE+TK +A G E +VR DMSEYMERH VS+LIG+PPGYVG
Sbjct 570 RPIASFIFSGPTGVGKTELTKAMASYFFGSEEAMVRLDMSEYMERHTVSKLIGSPPGYVG 629
Query 542 YDQGGLLTDAIHKNPHCVLLLDEIEKAHPDVFNLLLQVMDHGALTDNNGRKSDFRNVIIV 601
Y++GG LT+A+ K P+ V+L DEIEKAHPDVFNLLLQ+++ G LTD+ GR DF+N +++
Sbjct 630 YNEGGQLTEAVRKRPYTVVLFDEIEKAHPDVFNLLLQILEDGRLTDSKGRTIDFKNTLLI 689
Query 602 LTTNIGAESISRT--SIGFTEQDNSNDNQ---------EAMKRAFSPEFRNRLDGVIQFK 650
+T+NIG++ I + +GF ++N + Q E +K+ F PEF NR+D +I F+
Sbjct 690 MTSNIGSKVIEKKGGGLGFELEENIEELQYSRMRNLVNEELKQYFRPEFLNRVDEIIVFR 749
Query 651 SLPNAVIESVVDKFLTELQAQLDDKKVVLEVDQSARDWLSANGYDRLMGARPMQRLIQEH 710
L + + L E+ ++ + + L+V + ++ L GY+ GARP++R +
Sbjct 750 QLTKDEVRDIAHIMLREIFERVKQQGISLQVTERFKNLLIEEGYNPSYGARPLRRALVRL 809
Query 711 LKKPLAEMILFGELADHGGNVAVSVKKEDGKEVGLQLSVFEDQTA 755
L+ LAE +L G++ + G N + V ++ K+V + L +Q A
Sbjct 810 LEDSLAEEVLSGKIKE-GDNAMIDV--DENKQVKILLGNSNNQHA 851
>P31541 ATP-dependent Clp protease ATP-binding subunit ClpA homolog
CD4A, chloroplastic [Solanum lycopersicum]
Length=926
Score = 526 bits (1356), Expect = 3e-178
Identities = 314/811 (39%), Positives = 473/811 (58%), Gaps = 94/811 (12%)
Query 10 LRLAVSMARQKRHEFLTVEHLLLALLDNDSAVNA--LKACGADIVSLRKELEEYVEQHTP 67
+ LA AR+ H F+ E +LL L+ + + A LK+ G ++ R E+E+ + + +
Sbjct 105 IMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSG 164
Query 68 KLGENSEQAPHPTESFDRILQRAIFHVQSSGGDRTVEGADVLVAMYSERDSFAVYLLKRH 127
+ P + L+ A G + +L+ + E + A +L+
Sbjct 165 FIAVEIPFTPRAKRVLELSLEEA-----RQLGHNYIGSEHLLLGLLREGEGVAARVLENL 219
Query 128 QINRLTL-TQYLSHGTRKEDVQSEEEVEDIEGESSSSSNAGPLEQFTLNLNNEALKGKTD 186
+ + TQ + + +S E V G +S LE++ NL A +GK D
Sbjct 220 GADPTNIRTQVI-----RMVGESSEAVGASVGGGTSGLKMPTLEEYGTNLTKLAEEGKLD 274
Query 187 PLIGREKEIERTAQILCRRRKNNPLLVGDPGVGKTSIAEGLAWLIVNGKAPKPLAHAEVY 246
P++GR+ +IER QIL RR KNNP L+G+PGVGKT+IAEGLA I NG P+ + +V
Sbjct 275 PVVGRQAQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVI 334
Query 247 SLDIGALVAGTKYRGDFEKRLKQLLNALKKNPNAILFIDEIHMIIGAGSSMGSTMDASNL 306
+LD+G LVAGTKYRG+FE+RLK+L+ +K++ ILFIDE+H +IGAG++ G+ +DA+N+
Sbjct 335 TLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGA-IDAANI 393
Query 307 IKPALANGTLRCIGSTTFQEYRQVFEKDHALSRRFQKIDVNEPSITETIEILRGLKTKFE 366
+KPALA G L+CIG+TT EYR+ EKD AL RRFQ + V EPS+ ETI+IL+GL+ ++E
Sbjct 394 LKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYE 453
Query 367 DFHHVEYDDKALVAAVELSSKFINDRFLPDKAIDVIDEAGAQRRLK----------AEKD 416
H + Y D+A+ AA +LS ++I+DRFLPDKAID+IDEAG++ RL+ EK+
Sbjct 454 IHHKLHYTDEAIEAAAKLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKE 513
Query 417 GSLITTENIE------------------DIVSKIARIPPKT------------------- 439
IT E E D+ ++I+ + K
Sbjct 514 LRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALIDKNKEKSKAESEAGDAAGPIVT 573
Query 440 ------------------VSKDDKAVLEYLERDLKRVVFGQDEAITALASAIKLSRAGLK 481
VS D+ L +E L V GQDEA+ A++ AI+ +R GLK
Sbjct 574 EADIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHTRVIGQDEAVKAISRAIRRARVGLK 633
Query 482 APDKPVGNFVFAGPTGVGKTEVTKQLAK-LLGVE--LVRFDMSEYMERHAVSRLIGAPPG 538
P++P+ +F+F+GPTGVGK+E+ K LA G E ++R DMSE+MERH VS+LIG+PPG
Sbjct 634 NPNRPIASFIFSGPTGVGKSELAKSLATYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPG 693
Query 539 YVGYDQGGLLTDAIHKNPHCVLLLDEIEKAHPDVFNLLLQVMDHGALTDNNGRKSDFRNV 598
YVGY +GG LT+A+ + P+ V+L DEIEKAHPDVFN++LQ+++ G LTD+ GR DF+N
Sbjct 694 YVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNT 753
Query 599 IIVLTTNIGAESISR------TSIGFTEQDNSNDN-----QEAMKRAFSPEFRNRLDGVI 647
++++T+N+G+ I + + F E+D+S + E +K+ F PEF NRL +I
Sbjct 754 LLIMTSNVGSSVIEKGGRRIGFDLDFDEKDSSYNRIKSLVTEELKQYFRPEFLNRLSEMI 813
Query 648 QFKSLPNAVIESVVDKFLTELQAQLDDKKVVLEVDQSARDWLSANGYDRLMGARPMQRLI 707
F+ L ++ + D L E+ +L +K++ L+V + RD + GY+ GARP++R I
Sbjct 814 VFRQLTKLEVKEIADIMLKEVFVRLKNKEIELQVTERFRDRVVDEGYNPSYGARPLRRAI 873
Query 708 QEHLKKPLAEMILFGELADHGGNVAVSVKKE 738
L+ +AE +L GE+ + G +V V V +
Sbjct 874 MRLLEDSMAEKMLAGEIKE-GDSVIVDVDSD 903
>P31542 ATP-dependent Clp protease ATP-binding subunit ClpA homolog
CD4B, chloroplastic [Solanum lycopersicum]
Length=923
Score = 523 bits (1347), Expect = 6e-177
Identities = 317/810 (39%), Positives = 479/810 (59%), Gaps = 93/810 (11%)
Query 10 LRLAVSMARQKRHEFLTVEHLLLALLDNDSAVNA--LKACGADIVSLRKELEEYVEQHTP 67
+ LA AR+ H F+ E +LL L+ + + A LK+ G ++ R E+E+ + + +
Sbjct 103 IMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGS- 161
Query 68 KLGENSEQAPHPTESFDRILQRAIFHVQSSGGDRTVEGADVLVAMYSERDSFAVYLLKRH 127
G + + P T R+L+ ++ + G + + +L+ + E + A +L+
Sbjct 162 --GFVAVEIPF-TPRAKRVLELSLEEARQLGHNY-IGSEHLLLGLLREGEGVAARVLENL 217
Query 128 QINRLTL-TQYLSHGTRKEDVQSEEEVEDIEGESSSSSNAGPLEQFTLNLNNEALKGKTD 186
+ + TQ + + +S E V G +S LE++ NL A +GK D
Sbjct 218 GADPSNIRTQVI-----RMVGESNEAVGASVGGGTSGQKMPTLEEYGTNLTKLAEEGKLD 272
Query 187 PLIGREKEIERTAQILCRRRKNNPLLVGDPGVGKTSIAEGLAWLIVNGKAPKPLAHAEVY 246
P++GR+ +IER QIL RR KNNP L+G+PGVGKT+IAEGLA I NG P+ + +V
Sbjct 273 PVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVI 332
Query 247 SLDIGALVAGTKYRGDFEKRLKQLLNALKKNPNAILFIDEIHMIIGAGSSMGSTMDASNL 306
+LD+G LVAGTKYRG+FE+RLK+L+ +K++ ILFIDE+H +IGAG++ G+ +DA+N+
Sbjct 333 TLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGA-IDAANI 391
Query 307 IKPALANGTLRCIGSTTFQEYRQVFEKDHALSRRFQKIDVNEPSITETIEILRGLKTKFE 366
+KPALA G L+CIG+TT EYR+ EKD AL RRFQ + V EP++ ETI+IL+GL+ ++E
Sbjct 392 LKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILKGLRERYE 451
Query 367 DFHHVEYDDKALVAAVELSSKFINDRFLPDKAIDVIDEAGAQRRLK----------AEKD 416
H + Y D+ LVAA +LS ++I+DRFLPDKAID+IDEAG++ RL+ EK+
Sbjct 452 IHHKLRYTDEDLVAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAKELEKE 511
Query 417 GSLITTENIE------------------DIVSKIARIPPKT------------------- 439
IT E E D+ ++I + K
Sbjct 512 LRQITKEKNEAVRGQDFEKAGELRDREMDLKAQITALIDKNKEVSKAESEAADTGPLVTE 571
Query 440 -----------------VSKDDKAVLEYLERDLKRVVFGQDEAITALASAIKLSRAGLKA 482
VS D+ L +E L + GQDEA+ A++ AI+ +R GLK
Sbjct 572 ADIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHTRIIGQDEAVKAISRAIRRARVGLKN 631
Query 483 PDKPVGNFVFAGPTGVGKTEVTKQLAK-LLGVE--LVRFDMSEYMERHAVSRLIGAPPGY 539
P++P+ +F+F+GPTGVGK+E+ K LA G E ++R DMSE+MERH VS+LIG+PPGY
Sbjct 632 PNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGY 691
Query 540 VGYDQGGLLTDAIHKNPHCVLLLDEIEKAHPDVFNLLLQVMDHGALTDNNGRKSDFRNVI 599
VGY +GG LT+A+ + P+ V+L DEIEKAHPDVFN++LQ+++ G LTD+ GR DF+N +
Sbjct 692 VGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTL 751
Query 600 IVLTTNIGAESISR--TSIGF----TEQDNSNDN-----QEAMKRAFSPEFRNRLDGVIQ 648
+++T+N+G+ I + IGF E+D+S + E +K+ F PEF NRLD +I
Sbjct 752 LIMTSNVGSSVIEKGGRRIGFDLDLDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIV 811
Query 649 FKSLPNAVIESVVDKFLTELQAQLDDKKVVLEVDQSARDWLSANGYDRLMGARPMQRLIQ 708
F+ L ++ + D L E+ +L K++ L+V + RD + GY+ GARP++R I
Sbjct 812 FRQLTKLEVKEIADIMLKEVFERLKVKEIELQVTERFRDRVVDEGYNPSYGARPLRRAIM 871
Query 709 EHLKKPLAEMILFGELADHGGNVAVSVKKE 738
L+ +AE +L E+ + G +V V V +
Sbjct 872 RLLEDSMAEKMLANEIKE-GDSVIVDVDSD 900
>Q9FI56 Chaperone protein ClpC1, chloroplastic [Arabidopsis thaliana]
Length=929
Score = 517 bits (1331), Expect = 2e-174
Identities = 315/810 (39%), Positives = 483/810 (60%), Gaps = 94/810 (12%)
Query 10 LRLAVSMARQKRHEFLTVEHLLLALLDNDSAVNA--LKACGADIVSLRKELEEYVEQHTP 67
+ LA AR+ H F+ E +LL L+ + + A LK+ G ++ R E+E+ + + +
Sbjct 106 IMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGS- 164
Query 68 KLGENSEQAPHPTESFDRILQRAIFHVQSSGGDRTVEGADVLVAMYSERDSFAVYLLKRH 127
G + + P T R+L+ ++ + G + + +L+ + E + A +L+
Sbjct 165 --GFVAVEIPF-TPRAKRVLELSLEEARQLGHNY-IGSEHLLLGLLREGEGVAARVLENL 220
Query 128 QINRLTL-TQYLSHGTRKEDVQSEEEVEDIEGESSSSSNAGPLEQFTLNLNNEALKGKTD 186
+ + TQ + V EV G SSS+ LE++ NL A +GK D
Sbjct 221 GADPSNIRTQVIRM------VGENNEVTANVGGGSSSNKMPTLEEYGTNLTKLAEEGKLD 274
Query 187 PLIGREKEIERTAQILCRRRKNNPLLVGDPGVGKTSIAEGLAWLIVNGKAPKPLAHAEVY 246
P++GR+ +IER QIL RR KNNP L+G+PGVGKT+IAEGLA I +G P+ + +V
Sbjct 275 PVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPETIEGKKVI 334
Query 247 SLDIGALVAGTKYRGDFEKRLKQLLNALKKNPNAILFIDEIHMIIGAGSSMGSTMDASNL 306
+LD+G LVAGTKYRG+FE+RLK+L+ ++++ ILFIDE+H +IGAG++ G+ +DA+N+
Sbjct 335 TLDMGLLVAGTKYRGEFEERLKKLMEEIRQSDEIILFIDEVHTLIGAGAAEGA-IDAANI 393
Query 307 IKPALANGTLRCIGSTTFQEYRQVFEKDHALSRRFQKIDVNEPSITETIEILRGLKTKFE 366
+KPALA G L+CIG+TT EYR+ EKD AL RRFQ + V EP++ ETI+IL+GL+ ++E
Sbjct 394 LKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILKGLRERYE 453
Query 367 DFHHVEYDDKALVAAVELSSKFINDRFLPDKAIDVIDEAGAQRRLK----------AEKD 416
H + Y D++LVAA +LS ++I+DRFLPDKAID+IDEAG++ RL+ EK+
Sbjct 454 IHHKLRYTDESLVAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQVPEEARELEKE 513
Query 417 GSLITTENIE------------------DIVSKIARIPP--KTVSKDDKAVLE----YLE 452
IT E E ++ ++++ I K +SK + E E
Sbjct 514 LRQITKEKNEAVRGQDFEKAGTLRDREIELRAEVSAIQAKGKEMSKAESETGEEGPMVTE 573
Query 453 RDLKRVV------------------------------FGQDEAITALASAIKLSRAGLKA 482
D++ +V GQDEA+ A++ AI+ +R GLK
Sbjct 574 SDIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHKRIIGQDEAVKAISRAIRRARVGLKN 633
Query 483 PDKPVGNFVFAGPTGVGKTEVTKQLAK-LLGVE--LVRFDMSEYMERHAVSRLIGAPPGY 539
P++P+ +F+F+GPTGVGK+E+ K LA G E ++R DMSE+MERH VS+LIG+PPGY
Sbjct 634 PNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGY 693
Query 540 VGYDQGGLLTDAIHKNPHCVLLLDEIEKAHPDVFNLLLQVMDHGALTDNNGRKSDFRNVI 599
VGY +GG LT+A+ + P+ V+L DEIEKAHPDVFN++LQ+++ G LTD+ GR DF+N +
Sbjct 694 VGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTL 753
Query 600 IVLTTNIGAESISR--TSIGF----TEQDNSNDN-----QEAMKRAFSPEFRNRLDGVIQ 648
+++T+N+G+ I + IGF E+D+S + E +K+ F PEF NRLD +I
Sbjct 754 LIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIV 813
Query 649 FKSLPNAVIESVVDKFLTELQAQLDDKKVVLEVDQSARDWLSANGYDRLMGARPMQRLIQ 708
F+ L ++ + D L E+ +L K++ L+V + ++ + GY+ GARP++R I
Sbjct 814 FRQLTKLEVKEIADILLKEVFERLKKKEIELQVTERFKERVVDEGYNPSYGARPLRRAIM 873
Query 709 EHLKKPLAEMILFGELADHGGNVAVSVKKE 738
L+ +AE +L E+ + G +V V V E
Sbjct 874 RLLEDSMAEKMLAREIKE-GDSVIVDVDAE 902
>Q7F9I1 Chaperone protein ClpC1, chloroplastic [Oryza sativa subsp.
japonica]
Length=918
Score = 516 bits (1330), Expect = 2e-174
Identities = 318/817 (39%), Positives = 480/817 (59%), Gaps = 94/817 (12%)
Query 10 LRLAVSMARQKRHEFLTVEHLLLALLDNDSAVNA--LKACGADIVSLRKELEEYVEQHTP 67
+ LA AR+ H F+ E +LL L+ + + A LK+ G ++ R E+E+ + + +
Sbjct 99 IMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGS- 157
Query 68 KLGENSEQAPHPTESFDRILQRAIFHVQSSGGDRTVEGADVLVAMYSERDSFAVYLLKRH 127
G + + P T R+L+ ++ + G + + +L+ + E + A +L+
Sbjct 158 --GFVAVEIPF-TPRAKRVLELSLEEARQLGHNY-IGSEHLLLGLLREGEGVAARVLESL 213
Query 128 QINRLTL-TQYLSHGTRKEDVQSEEEVEDIEGESSSSSNAGPLEQFTLNLNNEALKGKTD 186
+ + TQ + + +S E V G SS LE++ NL A +GK D
Sbjct 214 GADPNNIRTQVI-----RMVGESTEAVGAGVGGGSSGQKMPTLEEYGTNLTKLAEEGKLD 268
Query 187 PLIGREKEIERTAQILCRRRKNNPLLVGDPGVGKTSIAEGLAWLIVNGKAPKPLAHAEVY 246
P++GR+ +IER QIL RR KNNP L+G+PGVGKT+IAEGLA I NG P+ + +V
Sbjct 269 PVVGRQDQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRISNGDVPETIEGKKVI 328
Query 247 SLDIGALVAGTKYRGDFEKRLKQLLNALKKNPNAILFIDEIHMIIGAGSSMGSTMDASNL 306
+LD+G LVAGTKYRG+FE+RLK+L+ +K+N + ILFIDE+H +IGAG++ G+ +DA+N+
Sbjct 329 TLDMGLLVAGTKYRGEFEERLKKLMEEIKQNDDIILFIDEVHTLIGAGAAEGA-IDAANI 387
Query 307 IKPALANGTLRCIGSTTFQEYRQVFEKDHALSRRFQKIDVNEPSITETIEILRGLKTKFE 366
+KPALA G L+CIG+TT EYR+ EKD AL RRFQ + V EP++ ETI+ILRGL+ ++E
Sbjct 388 LKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILRGLRERYE 447
Query 367 DFHHVEYDDKALVAAVELSSKFINDRFL----------------------PDKAIDV--- 401
H + Y D +L+AA +LS ++I+DRFL PD+A ++
Sbjct 448 LHHKLRYTDDSLIAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPDEAKELDKE 507
Query 402 ----------------IDEAGAQR-------------------RLKAEKD----GSLITT 422
++AG R +KAE + G L+T
Sbjct 508 LRQVTKDKNEAVRGQDFEKAGELRDREMELKAQITAIIDKSKEMVKAETESGEVGPLVTE 567
Query 423 ENIEDIVSKIARIPPKTVSKDDKAVLEYLERDLKRVVFGQDEAITALASAIKLSRAGLKA 482
+I+ IVS IP + VS D+ L +E L + GQDEA+ A++ AI+ +R GLK
Sbjct 568 ADIQHIVSSWTGIPVEKVSSDESDRLLKMEETLHTRIIGQDEAVKAISRAIRRARVGLKN 627
Query 483 PDKPVGNFVFAGPTGVGKTEVTKQLAKL-LGVE--LVRFDMSEYMERHAVSRLIGAPPGY 539
P++P+ +F+F+GPTGVGK+E+ K LA G E ++R DMSE+MERH VS+LIG+PPGY
Sbjct 628 PNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGY 687
Query 540 VGYDQGGLLTDAIHKNPHCVLLLDEIEKAHPDVFNLLLQVMDHGALTDNNGRKSDFRNVI 599
VGY +GG LT+A+ + P+ V+L DEIEKAHPDVFN++LQ+++ G LTD+ GR DF+N +
Sbjct 688 VGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTL 747
Query 600 IVLTTNIGAESISR--TSIGF----TEQDNSNDN-----QEAMKRAFSPEFRNRLDGVIQ 648
+++T+N+G+ I + IGF E+D S + E +K+ F PEF NRLD +I
Sbjct 748 LIMTSNVGSSVIEKGGRKIGFDLDYDEKDTSYNRIKSLVTEELKQYFRPEFLNRLDEMIV 807
Query 649 FKSLPNAVIESVVDKFLTELQAQLDDKKVVLEVDQSARDWLSANGYDRLMGARPMQRLIQ 708
F+ L ++ + D L E+ +L K + L+V + RD + GY+ GARP++R I
Sbjct 808 FRQLTKLEVKEIADIMLKEVFDRLKAKDIDLQVTEKFRDRVVDEGYNPSYGARPLRRAIM 867
Query 709 EHLKKPLAEMILFGELADHGGNVAVSVKKEDGKEVGL 745
L+ LAE +L GE+ + G+ A+ +GK + L
Sbjct 868 RLLEDSLAEKMLAGEVKE--GDSAIVDVDSEGKVIVL 902
>P35100 Chaperone protein ClpC, chloroplastic [Pisum sativum]
Length=922
Score = 512 bits (1319), Expect = 9e-173
Identities = 314/817 (38%), Positives = 483/817 (59%), Gaps = 94/817 (12%)
Query 10 LRLAVSMARQKRHEFLTVEHLLLALLDNDSAVNA--LKACGADIVSLRKELEEYVEQHTP 67
+ LA AR+ H F+ E +LL L+ + + A LK+ G ++ R E+E+ + + +
Sbjct 103 IMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGS- 161
Query 68 KLGENSEQAPHPTESFDRILQRAIFHVQSSGGDRTVEGADVLVAMYSERDSFAVYLLKRH 127
G + + P T R+L+ + + G + + +L+ + E + A +L+
Sbjct 162 --GFVAVEIPF-TPRAKRVLELSQEEARQLGHNY-IGSEHLLLGLLREGEGVAARVLENL 217
Query 128 QINRLTL-TQYLSHGTRKEDVQSEEEVEDIEGESSSSSNAGPLEQFTLNLNNEALKGKTD 186
+ + TQ + + +S + V G SS++ LE++ NL A +GK D
Sbjct 218 GADPTNIRTQVI-----RMVGESADSVTATVGSGSSNNKTPTLEEYGTNLTKLAEEGKLD 272
Query 187 PLIGREKEIERTAQILCRRRKNNPLLVGDPGVGKTSIAEGLAWLIVNGKAPKPLAHAEVY 246
P++GR+ +IER QIL RR KNNP L+G+PGVGKT+IAEGLA I NG P+ + +V
Sbjct 273 PVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVI 332
Query 247 SLDIGALVAGTKYRGDFEKRLKQLLNALKKNPNAILFIDEIHMIIGAGSSMGSTMDASNL 306
+LD+G LVAGTKYRG+FE+RLK+L+ +K++ + ILFIDE+H +IGAG++ G+ +DA+N+
Sbjct 333 TLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDDIILFIDEVHTLIGAGAAEGA-IDAANI 391
Query 307 IKPALANGTLRCIGSTTFQEYRQVFEKDHALSRRFQKIDVNEPSITETIEILRGLKTKFE 366
+KPALA G L+CIG+TT EYR+ EKD L RRFQ + V EP++ ETI+IL+GL+ ++E
Sbjct 392 LKPALARGELQCIGATTLDEYRKHIEKDPDLERRFQPVKVPEPTVDETIQILKGLRERYE 451
Query 367 DFHHVEYDDKALVAAVELSSKFINDRF----------------------LPDKAIDV--- 401
H + Y D+AL+AA +LS ++I+DRF LP++A ++
Sbjct 452 IHHKLRYTDEALIAAAQLSYQYISDRFLPDKAIDLVDEAGSRVRLQHAQLPEEAKELDKE 511
Query 402 ----------------IDEAGAQRR----LKAE-------------------KDGSLITT 422
++AG R LKA+ +G ++T
Sbjct 512 VRKIVKEKEEYVRNQDFEKAGELRDKEMDLKAQISALIEKGKEMSKAETETADEGPIVTE 571
Query 423 ENIEDIVSKIARIPPKTVSKDDKAVLEYLERDLKRVVFGQDEAITALASAIKLSRAGLKA 482
+I+ IVS IP VS D+ L +E L + + GQDEA+ A++ AI+ +R GLK
Sbjct 572 VDIQHIVSSWTGIPVDKVSADESDRLLKMEDTLHKRIIGQDEAVQAISRAIRRARVGLKN 631
Query 483 PDKPVGNFVFAGPTGVGKTEVTKQLAKL-LGVE--LVRFDMSEYMERHAVSRLIGAPPGY 539
P++P+ +F+F+GPTGVGK+E+ K LA G E ++R DMSE+MERH VS+LIG+PPGY
Sbjct 632 PNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGY 691
Query 540 VGYDQGGLLTDAIHKNPHCVLLLDEIEKAHPDVFNLLLQVMDHGALTDNNGRKSDFRNVI 599
VGY +GG LT+A+ + P+ V+L DEIEKAHPDVFN++LQ+++ G LTD+ GR DF+N +
Sbjct 692 VGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTL 751
Query 600 IVLTTNIGAESISR--TSIGF----TEQDNSNDN-----QEAMKRAFSPEFRNRLDGVIQ 648
+++T+N+G+ I + IGF E+D+S + E +K+ F PEF NRLD +I
Sbjct 752 LIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIV 811
Query 649 FKSLPNAVIESVVDKFLTELQAQLDDKKVVLEVDQSARDWLSANGYDRLMGARPMQRLIQ 708
F+ L ++ + D L E+ +L K++ L+V + RD + GY+ GARP++R I
Sbjct 812 FRQLTKLEVKEIADIMLKEVFQRLKTKEIELQVTERFRDRVVDEGYNPSYGARPLRRAIM 871
Query 709 EHLKKPLAEMILFGELADHGGNVAVSVKKEDGKEVGL 745
L+ +AE +L E+ + G +V V V DGK + L
Sbjct 872 RLLEDSMAEKMLAREIKE-GDSVIVDV-DSDGKVIVL 906
>Q8YM56 Chaperone protein ClpB 2 [Nostoc sp. (strain PCC 7120
/ SAG 25.82 / UTEX 2576)]
Length=872
Score = 308 bits (790), Expect = 1e-95
Identities = 193/457 (42%), Positives = 278/457 (61%), Gaps = 25/457 (5%)
Query 16 MARQKRHEFLTVEHLLLALLDNDS-AVNALKACGADIVSLRKELEEYVEQHTPKLGENSE 74
+A+Q + + + EHL+ ALL+ D A L G ++ + E+Y+ Q PK+ NS
Sbjct 23 IAKQHQQQQIESEHLMKALLEQDGLASGILTKAGVNLQKISDRTEQYI-QRQPKVSGNST 81
Query 75 QAPHPTESFDRILQRAIFHVQSSGGDRTVEGADVLVAMYSERDSFAVYLLKRHQINRLTL 134
+ S D +L RA H + D + +L+A Y + D F L + ++ L
Sbjct 82 SV-YLGRSLDTLLDRAEAH-RKDFQDEYISIEHLLLA-YPKDDRFGKGLFQEFALDESKL 138
Query 135 TQYLSHGTRKEDVQSEEEVEDIEGESSSSSNAGPLEQFTLNLNNEALKGKTDPLIGREKE 194
+ + V+ + V D E S LE++ +L A KG+ DP+IGR+ E
Sbjct 139 KNII------KQVRGSQTVTDQNPEGKYQS----LEKYGRDLTEAARKGQLDPVIGRDDE 188
Query 195 IERTAQILCRRRKNNPLLVGDPGVGKTSIAEGLAWLIVNGKAPKPLAHAEVYSLDIGALV 254
I RT QIL RR KNNP+L+G+PGVGKT+IAEGLA IV G P+ L ++ SLD+GA++
Sbjct 189 IRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVAGDVPQSLKDRKLISLDMGAMI 248
Query 255 AGTKYRGDFEKRLKQLLNALKKNP-NAILFIDEIHMIIGAGSSMGSTMDASNLIKPALAN 313
AG K+RG+FE+RLK +L + ++ N +LFIDEIH ++GAG++ G+ MDA NL+KP LA
Sbjct 249 AGAKFRGEFEERLKAVLKEVTESGGNIVLFIDEIHTVVGAGATQGA-MDAGNLLKPMLAR 307
Query 314 GTLRCIGSTTFQEYRQVFEKDHALSRRFQKIDVNEPSITETIEILRGLKTKFEDFHHVEY 373
G LRCIG+TT EYR+ EKD AL RRFQ++ V++PS+ +TI ILRGLK ++E H V+
Sbjct 308 GELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPSVEDTISILRGLKERYEVHHGVKI 367
Query 374 DDKALVAAVELSSKFINDRFLPDKAIDVIDEAGAQRRLKAEKDGSLITTENIEDIVSKIA 433
D +LVAA LSS++I+DRFLPDKAID++DEA A RLK E E +++I KI
Sbjct 368 SDSSLVAAATLSSRYISDRFLPDKAIDLVDEAAA--RLKMEITSK---PEELDEIDRKIL 422
Query 434 RIPPKTVS---KDDKAVLEYLERDLKRVVFGQDEAIT 467
++ + +S + D A E LER K + ++E T
Sbjct 423 QLEMEKLSLQKESDAASRERLERLEKELADLKEEQRT 459
Score = 291 bits (744), Expect = 4e-89
Identities = 159/335 (47%), Positives = 217/335 (65%), Gaps = 5/335 (1%)
Query 420 ITTENIEDIVSKIARIPPKTVSKDDKAVLEYLERDLKRVVFGQDEAITALASAIKLSRAG 479
+T +I +I+SK IP + + +K L +LE +L V GQDEA+TA+A AI+ SRAG
Sbjct 537 VTEADIAEIISKWTGIPISKLVESEKEKLLHLEDELHHRVIGQDEAVTAVADAIQRSRAG 596
Query 480 LKAPDKPVGNFVFAGPTGVGKTEVTKQLAKLL---GVELVRFDMSEYMERHAVSRLIGAP 536
L P++P +FVF GPTGVGKTE+ K LA + LVR DMSEYME+HAVSRLIGAP
Sbjct 597 LADPNRPTASFVFLGPTGVGKTELAKALASYMFDTEDALVRIDMSEYMEKHAVSRLIGAP 656
Query 537 PGYVGYDQGGLLTDAIHKNPHCVLLLDEIEKAHPDVFNLLLQVMDHGALTDNNGRKSDFR 596
PGYVGY++GG LT+ I + P+ V+L DEIEKAHPDVFN+ LQ++D G +TD G DF+
Sbjct 657 PGYVGYEEGGQLTETIRRRPYAVILFDEIEKAHPDVFNIFLQILDDGRVTDAQGHTVDFK 716
Query 597 NVIIVLTTNIGAESISRTSIGFTEQDNSNDN-QEAMKRAFSPEFRNRLDGVIQFKSLPNA 655
N II++T+NIG++ I + + D EAM+ +F PEF NR+D VI F SL
Sbjct 717 NTIIIMTSNIGSQYILDIAGDNSRYDEMRHRVMEAMRNSFRPEFLNRIDEVIIFHSLDKK 776
Query 656 VIESVVDKFLTELQAQLDDKKVVLEVDQSARDWLSANGYDRLMGARPMQRLIQEHLKKPL 715
+ +V + L+A+LDD+K+ L + A D+L+ GYD + GARP++R IQ L+ +
Sbjct 777 ELRQIVQLQVERLKARLDDRKISLRLSDVALDFLAEVGYDPVFGARPLKRAIQRELETQI 836
Query 716 AEMILFGELADHGGNVAVSVKKEDGKEVGLQLSVF 750
A+ IL GE D G + V V+ E L + VF
Sbjct 837 AKAILRGEFND-GDTIFVDVQNERLSFSRLPVEVF 870
Score = 26.9 bits (58), Expect = 0.069
Identities = 24/89 (27%), Positives = 37/89 (42%), Gaps = 0/89 (0%)
Query 2 LSRQLEVSLRLAVSMARQKRHEFLTVEHLLLALLDNDSAVNALKACGADIVSLRKELEEY 61
L R L+ L A + + + E++++EHLLLA +D L A S K + +
Sbjct 85 LGRSLDTLLDRAEAHRKDFQDEYISIEHLLLAYPKDDRFGKGLFQEFALDESKLKNIIKQ 144
Query 62 VEQHTPKLGENSEQAPHPTESFDRILQRA 90
V +N E E + R L A
Sbjct 145 VRGSQTVTDQNPEGKYQSLEKYGRDLTEA 173
Score = 21.9 bits (45), Expect = 2.4
Identities = 17/69 (25%), Positives = 32/69 (46%), Gaps = 4/69 (6%)
Query 143 RKEDVQSEEEVEDIEGESSSSSNAGPLEQFTLNLNNEALKGKTDPLIGREKEIERTAQIL 202
++ D S E +E +E E + EQ TLN ++ K + L ++EI++ +
Sbjct 433 KESDAASRERLERLEKELADLKE----EQRTLNTQWQSEKDVINKLQSVKEEIDKVNLEI 488
Query 203 CRRRKNNPL 211
+ +N L
Sbjct 489 QQAERNYDL 497
>Q89UL2 Chaperone protein ClpB [Bradyrhizobium diazoefficiens
(strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA
110)]
Length=879
Score = 302 bits (774), Expect = 2e-93
Identities = 159/321 (50%), Positives = 224/321 (70%), Gaps = 10/321 (3%)
Query 420 ITTENIEDIVSKIARIPPKTVSKDDKAVLEYLERDLKRVVFGQDEAITALASAIKLSRAG 479
+T +I +VS+ +P + + +K L +E L + V GQ EA+ A+A+A++ SRAG
Sbjct 532 VTANHIAQVVSRWTGVPVDKMLEGEKDKLLKMEDSLGKRVVGQAEAVHAVATAVRRSRAG 591
Query 480 LKAPDKPVGNFVFAGPTGVGKTEVTKQLAKLL---GVELVRFDMSEYMERHAVSRLIGAP 536
L+ P++P+G+F+F GPTGVGKTE+TK LA+ L +VR DMSEYME+H+VSRLIGAP
Sbjct 592 LQDPNRPMGSFMFLGPTGVGKTELTKALAEYLFNDETAMVRLDMSEYMEKHSVSRLIGAP 651
Query 537 PGYVGYDQGGLLTDAIHKNPHCVLLLDEIEKAHPDVFNLLLQVMDHGALTDNNGRKSDFR 596
PGYVGYD+GG LT+A+ + P+ V+L DEIEKAHPDVFN+LLQV+D G LTD GR DFR
Sbjct 652 PGYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFR 711
Query 597 NVIIVLTTNIGAESISRTSIGFTEQDNSNDNQEAM---KRAFSPEFRNRLDGVIQFKSLP 653
N +I++T+N+G+E + G +D S ++ M + F PEF NR+D +I F L
Sbjct 712 NTLIIMTSNLGSEFLVNQPEG---EDTSAVREQVMGMVRGHFRPEFLNRVDEIILFHRLQ 768
Query 654 NAVIESVVDKFLTELQAQLDDKKVVLEVDQSARDWLSANGYDRLMGARPMQRLIQEHLKK 713
+ + +V+ LQ L D+K+VL +D +ARDWL+A G+D GARP++R+IQ +L+
Sbjct 769 RSEMGRIVEIQFARLQKLLTDRKIVLTLDGAARDWLAAKGWDPAYGARPLKRVIQRYLQD 828
Query 714 PLAEMILFGELADHGGNVAVS 734
PLAEMIL G++ D G NVA+S
Sbjct 829 PLAEMILAGDVKD-GDNVAIS 848
Score = 292 bits (748), Expect = 1e-89
Identities = 211/557 (38%), Positives = 308/557 (55%), Gaps = 52/557 (9%)
Query 10 LRLAVSMARQKRHEFLTVEHLLLALLDNDSAVNA--LKACGADIVSLRKELEEYVEQHTP 67
++ A S+A ++ H+ + H+L LLD++ + A + G + ++ K E+ + +
Sbjct 14 IQSAQSLAVREGHQQFSTLHVLKVLLDDNEGLAAGLIDRAGGNSRAILKATEDALNKVPK 73
Query 68 KLGENSEQ---APHPTESFDRILQRAIFHVQSSGGDRTVEGADVLVAMYSERDSFAVYLL 124
G + Q AP +FD A GD V +L+ + E+ S A +L
Sbjct 74 VSGGGAGQIYLAPELARTFD-----AAEKAGEKAGDSFVTVERLLLGLTLEKTSEAGTIL 128
Query 125 KRHQINRLTLTQYLSHGTRKEDVQSEEEVEDIEGESSSSSNA-GPLEQFTLNLNNEALKG 183
+ + L + RK +S+++ NA L+++ +L A G
Sbjct 129 SKGGVTPQNLNAAIE-ALRKGRT----------ADSATAENAYDALKKYARDLTQAARDG 177
Query 184 KTDPLIGREKEIERTAQILCRRRKNNPLLVGDPGVGKTSIAEGLAWLIVNGKAPKPLAHA 243
K DP+IGR++EI RT Q+L RR KNNP+L+G+PGVGKT+IAEGLA IVNG P+ L
Sbjct 178 KLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDK 237
Query 244 EVYSLDIGALVAGTKYRGDFEKRLKQLLNALKKNPNA-ILFIDEIHMIIGAGSSMGSTMD 302
++ SLD+GAL+AG KYRG+FE+RLK +L + + ILFIDE+H +IGAG G+ MD
Sbjct 238 KLLSLDLGALIAGAKYRGEFEERLKAVLQEVTGSEGTFILFIDEMHTLIGAGKGDGA-MD 296
Query 303 ASNLIKPALANGTLRCIGSTTFQEYRQVFEKDHALSRRFQKIDVNEPSITETIEILRGLK 362
ASNL+KPALA G L CIG+TT EY++ EKD AL+RRFQ I V+EPS+ +TI ILRGLK
Sbjct 297 ASNLLKPALARGELHCIGATTLDEYQKHVEKDAALARRFQPIFVSEPSVEDTISILRGLK 356
Query 363 TKFEDFHHVEYDDKALVAAVELSSKFINDRFLPDKAIDVIDEAGAQRRLKAEKDGSLITT 422
K+E H V D ALVA+ LS+++I DRFLPDKAID++DEA A+ +++ + + +
Sbjct 357 DKYEQHHGVRITDSALVASATLSNRYITDRFLPDKAIDLMDEAAARLKMQVDSKPEELDS 416
Query 423 ENIEDIVSKIARIPPKTVS-KDDKAVLEYLERDLKRVVFGQDEAITALASA--------- 472
+ E I KI + K S K+ L+ LE++L + + ++TA SA
Sbjct 417 MDREIIRLKIEQEALKKESDAGSKSRLQTLEKELVELE-EKSASLTARWSAEKNKLSDAQ 475
Query 473 -IKLSRAGLK---APDKPVGNFVFAGPTGVGK-TEVTKQLAKLLGVELVRFDMSEYMER- 526
+K GL+ A + G F AG G+ E+ +QLA + E + E ME
Sbjct 476 KLKAELDGLRVELANAQRRGEFQKAGELAYGRIPELERQLADIEAKE----NSGEMMEEA 531
Query 527 -------HAVSRLIGAP 536
VSR G P
Sbjct 532 VTANHIAQVVSRWTGVP 548
>Q8YJ91 Chaperone protein ClpB [Brucella melitensis biotype 1
(strain 16M / ATCC 23456 / NCTC 10094)]
Length=874
Score = 298 bits (763), Expect = 7e-92
Identities = 171/429 (40%), Positives = 266/429 (62%), Gaps = 22/429 (5%)
Query 10 LRLAVSMARQKRHEFLTVEHLLLALLDNDS--AVNALKACGADIVSLRKELEEYVEQHTP 67
++ A + A ++ T EH+L L+D+D A + ++ G + +R L+ +E+ P
Sbjct 14 IQSAQTFALSSGNQQFTPEHILKVLIDDDEGLAASLVERAGGRVGDVRMGLQSALEK-LP 72
Query 68 KLGENSEQAPHPTESFDRILQRAIFHVQSSGGDRTVEGADVLVAMYSERDSFAVYLLKRH 127
K+ ++Q + ++ ++ A + S GD V +L A+ E+ + +L
Sbjct 73 KVSGGNDQL-YLSQPLAKVFSLAE-ELASKAGDSFVTVERLLTALAMEKSAKTSEILSAA 130
Query 128 QINRLTLTQYLSHGTRKEDVQSEEEVEDIEGESSSSSNAGPLEQFTLNLNNEALKGKTDP 187
+ L + ++ + S +S+ SN L+++ +L +A GK DP
Sbjct 131 GVTPTALNRVINDMRKGRTADS----------ASAESNYDALKKYARDLTEDARAGKLDP 180
Query 188 LIGREKEIERTAQILCRRRKNNPLLVGDPGVGKTSIAEGLAWLIVNGKAPKPLAHAEVYS 247
+IGR++EI RT Q+L RR KNNP+L+G+PGVGKT+IAEGLA IVNG P+ L ++ +
Sbjct 181 VIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDKQLMA 240
Query 248 LDIGALVAGTKYRGDFEKRLKQLLNALKKNPNAI-LFIDEIHMIIGAGSSMGSTMDASNL 306
LD+GAL+AG KYRG+FE+RLK +L+ ++ I LFIDE+H ++GAG + G+ MDASNL
Sbjct 241 LDMGALIAGAKYRGEFEERLKAVLSEVQTAAGQIILFIDEMHTLVGAGKTDGA-MDASNL 299
Query 307 IKPALANGTLRCIGSTTFQEYRQVFEKDHALSRRFQKIDVNEPSITETIEILRGLKTKFE 366
+KPALA G L C+G+TT +EYR+ EKD AL+RRFQ + V+EP++ +TI ILRGLK K+E
Sbjct 300 LKPALARGELHCVGATTLEEYRKYVEKDAALARRFQPVFVDEPTVEDTISILRGLKEKYE 359
Query 367 DFHHVEYDDKALVAAVELSSKFINDRFLPDKAIDVIDEAGAQRRLKAEKDGSLITTENIE 426
H V D ALVAA LS+++I DRFLPDKAID++DEA ++ R++ + E ++
Sbjct 360 QHHKVRVSDSALVAAAMLSNRYITDRFLPDKAIDLVDEAASRLRMQVDS-----KPEELD 414
Query 427 DIVSKIARI 435
+I +I ++
Sbjct 415 EIDRRIMQL 423
Score = 292 bits (748), Expect = 1e-89
Identities = 144/320 (45%), Positives = 218/320 (68%), Gaps = 7/320 (2%)
Query 414 EKDGSL----ITTENIEDIVSKIARIPPKTVSKDDKAVLEYLERDLKRVVFGQDEAITAL 469
E GSL +T +++ ++S+ IP + + ++ L +E ++ + V GQ EA+ A+
Sbjct 521 ENKGSLLEETVTPDHVAQVISRWTGIPVDRMLEGEREKLLRMEDEIGKRVVGQGEAVQAI 580
Query 470 ASAIKLSRAGLKAPDKPVGNFVFAGPTGVGKTEVTKQLAKLL---GVELVRFDMSEYMER 526
+ A++ +RAGL+ P++P+G+F+F GPTGVGKTE+TK LA L +VR DMSE+ME+
Sbjct 581 SKAVRRARAGLQDPNRPIGSFIFLGPTGVGKTELTKALASFLFQDDTAMVRIDMSEFMEK 640
Query 527 HAVSRLIGAPPGYVGYDQGGLLTDAIHKNPHCVLLLDEIEKAHPDVFNLLLQVMDHGALT 586
H+VSRLIGAPPGYVGY++GG+LT+A+ + P+ V+L DEIEKAHPDVFN+LLQV+D G LT
Sbjct 641 HSVSRLIGAPPGYVGYEEGGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLT 700
Query 587 DNNGRKSDFRNVIIVLTTNIGAESISRTSIGFTEQDNSNDNQEAMKRAFSPEFRNRLDGV 646
D G DFRN +I++T+N+GAE + + +D ++ +F PEF NR+D +
Sbjct 701 DGQGHTVDFRNTVIIMTSNLGAEYLVNLGENDDVETVRDDVMGVVRASFRPEFLNRVDEI 760
Query 647 IQFKSLPNAVIESVVDKFLTELQAQLDDKKVVLEVDQSARDWLSANGYDRLMGARPMQRL 706
I F L + ++VD + LQ L D+K+ L+++ AR+WL+ GYD GARP++R+
Sbjct 761 ILFHRLRREDMGAIVDIQMQRLQYLLSDRKITLQLEDDAREWLANKGYDPAYGARPLKRV 820
Query 707 IQEHLKKPLAEMILFGELAD 726
IQ+ ++ PLAE IL G++ D
Sbjct 821 IQKEVQDPLAERILLGDILD 840
>Q7CEG6 Chaperone protein ClpB [Brucella suis biovar 1 (strain
1330)]
Length=874
Score = 298 bits (762), Expect = 1e-91
Identities = 171/429 (40%), Positives = 265/429 (62%), Gaps = 22/429 (5%)
Query 10 LRLAVSMARQKRHEFLTVEHLLLALLDNDS--AVNALKACGADIVSLRKELEEYVEQHTP 67
++ A + A ++ T EH+L L+D+D A + ++ G + +R L+ +E+ P
Sbjct 14 IQSAQTFALSSGNQQFTPEHILKVLIDDDEGLAASLVERAGGRVGDVRMGLQSALEK-LP 72
Query 68 KLGENSEQAPHPTESFDRILQRAIFHVQSSGGDRTVEGADVLVAMYSERDSFAVYLLKRH 127
K+ ++Q + ++ ++ A + S GD V +L A+ E+ + +L
Sbjct 73 KVSGGNDQL-YLSQPLAKVFSLAE-ELASKAGDSFVTVERLLTALAMEKSAKTSEILSAA 130
Query 128 QINRLTLTQYLSHGTRKEDVQSEEEVEDIEGESSSSSNAGPLEQFTLNLNNEALKGKTDP 187
+ L + ++ + S +S+ SN L+++ +L +A GK DP
Sbjct 131 GVTPTALNRVINDMRKGRTADS----------ASAESNYDALKKYARDLTEDARAGKLDP 180
Query 188 LIGREKEIERTAQILCRRRKNNPLLVGDPGVGKTSIAEGLAWLIVNGKAPKPLAHAEVYS 247
+IGR++EI RT Q+L RR KNNP+L+G+PGVGKT+IAEGLA IVNG P+ L ++ +
Sbjct 181 VIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDKQLMA 240
Query 248 LDIGALVAGTKYRGDFEKRLKQLLNALKKNPNAI-LFIDEIHMIIGAGSSMGSTMDASNL 306
LD+GAL+AG KYRG+FE+RLK +L+ ++ I LFIDE+H ++GAG + G+ MDASNL
Sbjct 241 LDMGALIAGAKYRGEFEERLKAVLSEVQTAAGQIILFIDEMHTLVGAGKTDGA-MDASNL 299
Query 307 IKPALANGTLRCIGSTTFQEYRQVFEKDHALSRRFQKIDVNEPSITETIEILRGLKTKFE 366
+KPALA G L C+G+TT +EYR+ EKD AL+RRFQ + V+EP++ +TI ILRGLK K+E
Sbjct 300 LKPALARGELHCVGATTLEEYRKYVEKDAALARRFQPVFVDEPTVEDTISILRGLKEKYE 359
Query 367 DFHHVEYDDKALVAAVELSSKFINDRFLPDKAIDVIDEAGAQRRLKAEKDGSLITTENIE 426
H V D ALVAA LS+++I DRFLPDKAID++DEA ++ R+ + E ++
Sbjct 360 QHHKVRVSDSALVAAATLSNRYITDRFLPDKAIDLVDEAASRLRMHVDS-----KPEELD 414
Query 427 DIVSKIARI 435
+I +I ++
Sbjct 415 EIDRRIMQL 423
Score = 294 bits (753), Expect = 2e-90
Identities = 145/320 (45%), Positives = 219/320 (68%), Gaps = 7/320 (2%)
Query 414 EKDGSL----ITTENIEDIVSKIARIPPKTVSKDDKAVLEYLERDLKRVVFGQDEAITAL 469
E GSL +T +++ ++S+ IP + + ++ L +E ++ + V GQ EA+ A+
Sbjct 521 ENKGSLLEETVTPDHVAQVISRWTGIPVDRMLEGEREKLLRMEDEIGKRVVGQGEAVQAI 580
Query 470 ASAIKLSRAGLKAPDKPVGNFVFAGPTGVGKTEVTKQLAKLL---GVELVRFDMSEYMER 526
+ A++ +RAGL+ P++P+G+F+F GPTGVGKTE+TK LA L +VR DMSE+ME+
Sbjct 581 SKAVRRARAGLQDPNRPIGSFIFLGPTGVGKTELTKALASFLFQDDTAMVRIDMSEFMEK 640
Query 527 HAVSRLIGAPPGYVGYDQGGLLTDAIHKNPHCVLLLDEIEKAHPDVFNLLLQVMDHGALT 586
H+VSRLIGAPPGYVGY++GG+LT+A+ + P+ V+L DEIEKAHPDVFN+LLQV+D G LT
Sbjct 641 HSVSRLIGAPPGYVGYEEGGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLT 700
Query 587 DNNGRKSDFRNVIIVLTTNIGAESISRTSIGFTEQDNSNDNQEAMKRAFSPEFRNRLDGV 646
D GR DFRN +I++T+N+GAE + + +D ++ +F PEF NR+D +
Sbjct 701 DGQGRTVDFRNTVIIMTSNLGAEYLVNLGENDDVETVRDDVMGVVRASFRPEFLNRVDEI 760
Query 647 IQFKSLPNAVIESVVDKFLTELQAQLDDKKVVLEVDQSARDWLSANGYDRLMGARPMQRL 706
I F L + ++VD + LQ L D+K+ L+++ AR+WL+ GYD GARP++R+
Sbjct 761 ILFHRLRREDMGAIVDIQMQRLQYLLSDRKITLQLEDDAREWLANKGYDPAYGARPLKRV 820
Query 707 IQEHLKKPLAEMILFGELAD 726
IQ+ ++ PLAE IL G++ D
Sbjct 821 IQKEVQDPLAERILLGDILD 840
Score = 20.0 bits (40), Expect = 9.2
Identities = 30/131 (23%), Positives = 47/131 (36%), Gaps = 8/131 (6%)
Query 50 DIVSLRKELEEYVEQHTPKLGENSEQAPHPTES----FDRILQRAIFHVQSSGGDRTVEG 105
D +S+ + L+E EQH +S T S DR L + R
Sbjct 346 DTISILRGLKEKYEQHHKVRVSDSALVAAATLSNRYITDRFLPDKAIDLVDEAASRLRMH 405
Query 106 ADVLVAMYSERDSFAVYLLKRHQINRLTLTQYLSHGTRKEDVQSEEEVEDIEGESSSSSN 165
D E D + L +I R L ++ + E+E+ D+E ES+ +
Sbjct 406 VDSKPEELDEIDRRIMQL----KIEREALKVETDAASKDRLQRIEKELSDLEEESAELTA 461
Query 166 AGPLEQFTLNL 176
E+ L L
Sbjct 462 KWQAEKQKLGL 472
Lambda K H a alpha
0.317 0.134 0.373 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 9400664
Database: 4870778db0f298d0a9356b772207d924.SwissProt.fasta
Posted date: May 20, 2024 6:15 PM
Number of letters in database: 14,505
Number of sequences in database: 17
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
