BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 22f3748fe72d33087fcb00fe3e6f70a4.SwissProt.fasta
           1 sequences; 509 total letters



Query= ACIAD1394

Length=119
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q58485 Uncharacterized protein MJ1085 [Methanocaldococcus jannasc...  18.5    0.10 


>Q58485 Uncharacterized protein MJ1085 [Methanocaldococcus jannaschii 
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / 
NBRC 100440)]
Length=509

 Score = 18.5 bits (36),  Expect = 0.10
 Identities = 13/34 (38%), Positives = 19/34 (56%), Gaps = 3/34 (9%)

Query  34   YVVDGIVLNQELSE--RLDYFSNRK-LNRFDNLE  64
            Y+  GI+ N+E S    L YF+  K  + FD L+
Sbjct  156  YLYYGILENREFSNDAELYYFAIEKGFSDFDELK  189


 Score = 16.5 bits (31),  Expect = 0.44
 Identities = 11/40 (28%), Positives = 17/40 (43%), Gaps = 0/40 (0%)

Query  41   LNQELSERLDYFSNRKLNRFDNLEQLYLKSILINEKIDLE  80
            LN+   +  +Y         D  E    K+I +N K +LE
Sbjct  206  LNRGFKDAYEYNDALSKGFRDADEYKIAKAIGVNSKKELE  245


 Score = 15.0 bits (27),  Expect = 1.4
 Identities = 9/40 (23%), Positives = 19/40 (48%), Gaps = 8/40 (20%)

Query  40   VLNQELSERLD--------YFSNRKLNRFDNLEQLYLKSI  71
            ++ + +++RLD        Y+   +   F N  +LY  +I
Sbjct  139  LVKEGIAQRLDDKYIIEYLYYGILENREFSNDAELYYFAI  178


 Score = 14.6 bits (26),  Expect = 1.9
 Identities = 11/34 (32%), Positives = 12/34 (35%), Gaps = 0/34 (0%)

Query  47   ERLDYFSNRKLNRFDNLEQLYLKSILINEKIDLE  80
            ERL       LN+  NL      S       DLE
Sbjct  293  ERLMKIKKDVLNKLANLSSPSWYSTRFTTVDDLE  326


 Score = 14.2 bits (25),  Expect = 2.5
 Identities = 4/6 (67%), Positives = 6/6 (100%), Gaps = 0/6 (0%)

Query  1    MFNKLK  6
            ++NKLK
Sbjct  285  LYNKLK  290


 Score = 14.2 bits (25),  Expect = 2.5
 Identities = 7/35 (20%), Positives = 18/35 (51%), Gaps = 0/35 (0%)

Query  40   VLNQELSERLDYFSNRKLNRFDNLEQLYLKSILIN  74
            VLN+  +     + + +    D+LE+  + S +++
Sbjct  302  VLNKLANLSSPSWYSTRFTTVDDLEEYLVDSEIVS  336



Lambda      K        H        a         alpha
   0.323    0.141    0.406    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 46656


  Database: 22f3748fe72d33087fcb00fe3e6f70a4.SwissProt.fasta
    Posted date:  May 20, 2024  11:37 PM
  Number of letters in database: 509
  Number of sequences in database:  1



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40