BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 4bbd54b07a870bcc2473e50b47d71fe9.SwissProt.fasta
22 sequences; 3,540 total letters
Query= ACIAD1405
Length=148
Score E
Sequences producing significant alignments: (Bits) Value
O69219 Putative HTH-type transcriptional regulator ORF2 [Azotobac... 145 7e-49
A8GHY4 HTH-type transcriptional regulator IscR [Serratia proteama... 142 8e-48
Q6D258 HTH-type transcriptional regulator IscR [Pectobacterium at... 141 3e-47
Q6LU63 HTH-type transcriptional regulator IscR [Photobacterium pr... 140 8e-47
B7MYG4 HTH-type transcriptional regulator IscR [Escherichia coli ... 140 8e-47
B7NRI0 HTH-type transcriptional regulator IscR [Escherichia coli ... 140 8e-47
B5Z105 HTH-type transcriptional regulator IscR [Escherichia coli ... 140 8e-47
P0AGL0 HTH-type transcriptional regulator IscR [Escherichia coli ... 140 8e-47
P0AGK8 HTH-type transcriptional regulator IscR [Escherichia coli ... 140 8e-47
Q8GLE9 HTH-type transcriptional regulator IscR [Xenorhabdus nemat... 140 9e-47
B2VI31 HTH-type transcriptional regulator IscR [Erwinia tasmanien... 139 1e-46
Q7N223 HTH-type transcriptional regulator IscR [Photorhabdus laum... 139 2e-46
A8AD51 HTH-type transcriptional regulator IscR [Citrobacter koser... 139 2e-46
B5R5A3 HTH-type transcriptional regulator IscR [Salmonella enteri... 139 3e-46
B5FR87 HTH-type transcriptional regulator IscR [Salmonella dublin... 139 3e-46
Q57LG8 HTH-type transcriptional regulator IscR [Salmonella choler... 139 3e-46
A9MHJ3 HTH-type transcriptional regulator IscR [Salmonella arizon... 139 3e-46
B5F1C1 HTH-type transcriptional regulator IscR [Salmonella agona ... 139 3e-46
P0A0Z0 Putative HTH-type transcriptional regulator NMB1378 [Neiss... 129 7e-43
P33395 Protein rrf2 [Desulfovibrio vulgaris (strain ATCC 29579 / ... 88.2 1e-26
O34527 HTH-type transcriptional regulator CymR [Bacillus subtilis... 53.5 2e-13
Q9R9M8 Protein aau3 [Rhizobium meliloti (strain 1021)] 51.2 2e-12
>O69219 Putative HTH-type transcriptional regulator ORF2 [Azotobacter
vinelandii]
Length=164
Score = 145 bits (366), Expect = 7e-49
Identities = 72/133 (54%), Positives = 98/133 (74%), Gaps = 0/133 (0%)
Query 1 VTALLDLALQPTEQTITLAEIAARQSISVAYLEQLFAKLKRHGLVSSVRGANGGYHLARH 60
VTA+LDLAL ++LA+I+ RQ IS++YLEQLFAKL+R+ LV+SVRG GGY L+R
Sbjct 11 VTAMLDLALHAQNGPVSLADISERQGISLSYLEQLFAKLRRNSLVTSVRGPGGGYQLSRS 70
Query 61 ATEITVLEIIEAVNETVDATRCDHKGNCQNGAMCLTHDLWQELSHHIADYLAKITLADLI 120
I V E+I+AVNE+VD TRC C++G +CLTH LW +LSH I ++L+ I+LADL+
Sbjct 71 MAAIQVAEVIDAVNESVDVTRCQGDRGCRSGEVCLTHYLWCDLSHQIHEFLSGISLADLV 130
Query 121 ARDNVQTVALRQN 133
AR +VQ + Q+
Sbjct 131 ARSDVQDLVRLQD 143
>A8GHY4 HTH-type transcriptional regulator IscR [Serratia proteamaculans
(strain 568)]
Length=164
Score = 142 bits (359), Expect = 8e-48
Identities = 72/133 (54%), Positives = 97/133 (73%), Gaps = 0/133 (0%)
Query 1 VTALLDLALQPTEQTITLAEIAARQSISVAYLEQLFAKLKRHGLVSSVRGANGGYHLARH 60
VTA+LD+AL E + LA+I+ RQ IS++YLEQLF++L+++GLV+SVRG GGY L +
Sbjct 11 VTAMLDVALHSQEGPVPLADISERQGISLSYLEQLFSRLRKNGLVASVRGPGGGYLLGKD 70
Query 61 ATEITVLEIIEAVNETVDATRCDHKGNCQNGAMCLTHDLWQELSHHIADYLAKITLADLI 120
A+EI V +I AV+E+VDATRC K CQ G CLTH LW++LS I+ +L ITLA+L+
Sbjct 71 ASEIAVGAVITAVDESVDATRCQGKEGCQGGDRCLTHTLWRDLSERISGFLNNITLAELV 130
Query 121 ARDNVQTVALRQN 133
+V VA RQN
Sbjct 131 NNQDVLVVADRQN 143
>Q6D258 HTH-type transcriptional regulator IscR [Pectobacterium
atrosepticum (strain SCRI 1043 / ATCC BAA-672)]
Length=164
Score = 141 bits (355), Expect = 3e-47
Identities = 71/134 (53%), Positives = 97/134 (72%), Gaps = 0/134 (0%)
Query 1 VTALLDLALQPTEQTITLAEIAARQSISVAYLEQLFAKLKRHGLVSSVRGANGGYHLARH 60
VTA+LD+AL E + LA+I+ RQ IS++YLEQLF++L+++GLV+SVRG GGY L ++
Sbjct 11 VTAMLDVALHSQEGPVPLADISERQGISLSYLEQLFSRLRKNGLVASVRGPGGGYLLGKN 70
Query 61 ATEITVLEIIEAVNETVDATRCDHKGNCQNGAMCLTHDLWQELSHHIADYLAKITLADLI 120
A EI V +I AV+E+VDATRC + +CQ G CLTH LW++LS I D+L ITL +L+
Sbjct 71 ANEIAVGMVISAVDESVDATRCQGRESCQGGDRCLTHTLWRDLSDRITDFLNNITLDELV 130
Query 121 ARDNVQTVALRQNT 134
V VA RQ+T
Sbjct 131 NNKEVLNVADRQDT 144
>Q6LU63 HTH-type transcriptional regulator IscR [Photobacterium
profundum (strain SS9)]
Length=172
Score = 140 bits (353), Expect = 8e-47
Identities = 71/146 (49%), Positives = 102/146 (70%), Gaps = 0/146 (0%)
Query 1 VTALLDLALQPTEQTITLAEIAARQSISVAYLEQLFAKLKRHGLVSSVRGANGGYHLARH 60
VTA+LD+AL + + LA+I+ RQ IS++YLEQLF++L++ GLV+SVRG GGY L
Sbjct 11 VTAMLDVALHSQDGPVPLADISERQGISLSYLEQLFSRLRKAGLVASVRGPGGGYRLGED 70
Query 61 ATEITVLEIIEAVNETVDATRCDHKGNCQNGAMCLTHDLWQELSHHIADYLAKITLADLI 120
A +I V +I AV+E+VDAT+C K +CQ G CLTH LW +LS I+ +L ITL +L+
Sbjct 71 ANDIAVGMVIAAVDESVDATKCHGKADCQGGVRCLTHTLWHDLSSRISGFLNNITLGELM 130
Query 121 ARDNVQTVALRQNTVNYDSALLSVTG 146
+NVQ ++ RQ+ V +S+L + G
Sbjct 131 RDNNVQEISGRQDQVLSNSSLRTSFG 156
>B7MYG4 HTH-type transcriptional regulator IscR [Escherichia coli
O81 (strain ED1a)]
Length=162
Score = 140 bits (352), Expect = 8e-47
Identities = 70/134 (52%), Positives = 95/134 (71%), Gaps = 0/134 (0%)
Query 1 VTALLDLALQPTEQTITLAEIAARQSISVAYLEQLFAKLKRHGLVSSVRGANGGYHLARH 60
VTA+LD+AL + LA+I+ RQ IS++YLEQLF++L+++GLVSSVRG GGY L +
Sbjct 11 VTAMLDVALNSEAGPVPLADISERQGISLSYLEQLFSRLRKNGLVSSVRGPGGGYLLGKD 70
Query 61 ATEITVLEIIEAVNETVDATRCDHKGNCQNGAMCLTHDLWQELSHHIADYLAKITLADLI 120
A+ I V E+I AV+E+VDATRC KG CQ G CLTH LW++LS + +L ITL +L+
Sbjct 71 ASSIAVGEVISAVDESVDATRCQGKGGCQGGDKCLTHALWRDLSDRLTGFLNNITLGELV 130
Query 121 ARDNVQTVALRQNT 134
V V+ RQ+T
Sbjct 131 NNQEVLDVSGRQHT 144
>B7NRI0 HTH-type transcriptional regulator IscR [Escherichia coli
O7:K1 (strain IAI39 / ExPEC)]
Length=162
Score = 140 bits (352), Expect = 8e-47
Identities = 70/134 (52%), Positives = 95/134 (71%), Gaps = 0/134 (0%)
Query 1 VTALLDLALQPTEQTITLAEIAARQSISVAYLEQLFAKLKRHGLVSSVRGANGGYHLARH 60
VTA+LD+AL + LA+I+ RQ IS++YLEQLF++L+++GLVSSVRG GGY L +
Sbjct 11 VTAMLDVALNSEAGPVPLADISERQGISLSYLEQLFSRLRKNGLVSSVRGPGGGYLLGKD 70
Query 61 ATEITVLEIIEAVNETVDATRCDHKGNCQNGAMCLTHDLWQELSHHIADYLAKITLADLI 120
A+ I V E+I AV+E+VDATRC KG CQ G CLTH LW++LS + +L ITL +L+
Sbjct 71 ASSIAVGEVISAVDESVDATRCQGKGGCQGGDKCLTHALWRDLSDRLTGFLNNITLGELV 130
Query 121 ARDNVQTVALRQNT 134
V V+ RQ+T
Sbjct 131 NNQEVLDVSGRQHT 144
>B5Z105 HTH-type transcriptional regulator IscR [Escherichia coli
O157:H7 (strain EC4115 / EHEC)]
Length=162
Score = 140 bits (352), Expect = 8e-47
Identities = 70/134 (52%), Positives = 95/134 (71%), Gaps = 0/134 (0%)
Query 1 VTALLDLALQPTEQTITLAEIAARQSISVAYLEQLFAKLKRHGLVSSVRGANGGYHLARH 60
VTA+LD+AL + LA+I+ RQ IS++YLEQLF++L+++GLVSSVRG GGY L +
Sbjct 11 VTAMLDVALNSEAGPVPLADISERQGISLSYLEQLFSRLRKNGLVSSVRGPGGGYLLGKD 70
Query 61 ATEITVLEIIEAVNETVDATRCDHKGNCQNGAMCLTHDLWQELSHHIADYLAKITLADLI 120
A+ I V E+I AV+E+VDATRC KG CQ G CLTH LW++LS + +L ITL +L+
Sbjct 71 ASSIAVGEVISAVDESVDATRCQGKGGCQGGDKCLTHALWRDLSDRLTGFLNNITLGELV 130
Query 121 ARDNVQTVALRQNT 134
V V+ RQ+T
Sbjct 131 NNQEVLDVSGRQHT 144
>P0AGL0 HTH-type transcriptional regulator IscR [Escherichia coli
O157:H7]
Length=162
Score = 140 bits (352), Expect = 8e-47
Identities = 70/134 (52%), Positives = 95/134 (71%), Gaps = 0/134 (0%)
Query 1 VTALLDLALQPTEQTITLAEIAARQSISVAYLEQLFAKLKRHGLVSSVRGANGGYHLARH 60
VTA+LD+AL + LA+I+ RQ IS++YLEQLF++L+++GLVSSVRG GGY L +
Sbjct 11 VTAMLDVALNSEAGPVPLADISERQGISLSYLEQLFSRLRKNGLVSSVRGPGGGYLLGKD 70
Query 61 ATEITVLEIIEAVNETVDATRCDHKGNCQNGAMCLTHDLWQELSHHIADYLAKITLADLI 120
A+ I V E+I AV+E+VDATRC KG CQ G CLTH LW++LS + +L ITL +L+
Sbjct 71 ASSIAVGEVISAVDESVDATRCQGKGGCQGGDKCLTHALWRDLSDRLTGFLNNITLGELV 130
Query 121 ARDNVQTVALRQNT 134
V V+ RQ+T
Sbjct 131 NNQEVLDVSGRQHT 144
>P0AGK8 HTH-type transcriptional regulator IscR [Escherichia coli
(strain K12)]
Length=162
Score = 140 bits (352), Expect = 8e-47
Identities = 70/134 (52%), Positives = 95/134 (71%), Gaps = 0/134 (0%)
Query 1 VTALLDLALQPTEQTITLAEIAARQSISVAYLEQLFAKLKRHGLVSSVRGANGGYHLARH 60
VTA+LD+AL + LA+I+ RQ IS++YLEQLF++L+++GLVSSVRG GGY L +
Sbjct 11 VTAMLDVALNSEAGPVPLADISERQGISLSYLEQLFSRLRKNGLVSSVRGPGGGYLLGKD 70
Query 61 ATEITVLEIIEAVNETVDATRCDHKGNCQNGAMCLTHDLWQELSHHIADYLAKITLADLI 120
A+ I V E+I AV+E+VDATRC KG CQ G CLTH LW++LS + +L ITL +L+
Sbjct 71 ASSIAVGEVISAVDESVDATRCQGKGGCQGGDKCLTHALWRDLSDRLTGFLNNITLGELV 130
Query 121 ARDNVQTVALRQNT 134
V V+ RQ+T
Sbjct 131 NNQEVLDVSGRQHT 144
>Q8GLE9 HTH-type transcriptional regulator IscR [Xenorhabdus nematophila
(strain ATCC 19061 / DSM 3370 / CCUG 14189 / LMG
1036 / NCIMB 9965 / AN6)]
Length=164
Score = 140 bits (352), Expect = 9e-47
Identities = 71/134 (53%), Positives = 94/134 (70%), Gaps = 0/134 (0%)
Query 1 VTALLDLALQPTEQTITLAEIAARQSISVAYLEQLFAKLKRHGLVSSVRGANGGYHLARH 60
VTA+LD+AL E + LA+I+ RQ IS++YLEQLF++L+++GLVSSVRG GGY L R
Sbjct 11 VTAMLDVALHSQEGPVPLADISERQGISLSYLEQLFSRLRKNGLVSSVRGPGGGYLLGRD 70
Query 61 ATEITVLEIIEAVNETVDATRCDHKGNCQNGAMCLTHDLWQELSHHIADYLAKITLADLI 120
A I V E+I AV+E+VDATRC K CQ G CLTH LW++LS I +L I+L +L+
Sbjct 71 AGRIFVAEVISAVDESVDATRCQGKEGCQGGDRCLTHALWRDLSERITSFLGSISLEELV 130
Query 121 ARDNVQTVALRQNT 134
V VA RQ++
Sbjct 131 KNQEVLDVADRQDS 144
>B2VI31 HTH-type transcriptional regulator IscR [Erwinia tasmaniensis
(strain DSM 17950 / CFBP 7177 / CIP 109463 / NCPPB 4357
/ Et1/99)]
Length=165
Score = 139 bits (351), Expect = 1e-46
Identities = 70/134 (52%), Positives = 96/134 (72%), Gaps = 0/134 (0%)
Query 1 VTALLDLALQPTEQTITLAEIAARQSISVAYLEQLFAKLKRHGLVSSVRGANGGYHLARH 60
VTA+LD+AL E + LA+I+ RQ IS++YLEQLF++L+++GLV+SVRG GGY L +
Sbjct 11 VTAMLDVALHSHEGPVPLADISERQGISLSYLEQLFSRLRKNGLVASVRGPGGGYLLGKA 70
Query 61 ATEITVLEIIEAVNETVDATRCDHKGNCQNGAMCLTHDLWQELSHHIADYLAKITLADLI 120
A I V +I AV+E+VDAT+C K CQ G CLTH LW++LS I+D+L ITLA+L+
Sbjct 71 ADAIAVGAVITAVDESVDATKCQGKEGCQGGERCLTHVLWRDLSERISDFLNNITLAELV 130
Query 121 ARDNVQTVALRQNT 134
+ VA RQN+
Sbjct 131 NNQEILVVADRQNS 144
Score = 18.9 bits (37), Expect = 0.60
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query 16 ITLAEIAARQSISVAYLEQLFAKLKR--HGLVSSVRGAN 52
ITLAE+ Q I V Q +++R HG + N
Sbjct 124 ITLAELVNNQEILVVADRQNSNEIRRAPHGRMHETINVN 162
>Q7N223 HTH-type transcriptional regulator IscR [Photorhabdus
laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 /
TT01)]
Length=164
Score = 139 bits (350), Expect = 2e-46
Identities = 70/133 (53%), Positives = 96/133 (72%), Gaps = 0/133 (0%)
Query 1 VTALLDLALQPTEQTITLAEIAARQSISVAYLEQLFAKLKRHGLVSSVRGANGGYHLARH 60
VTA+LD+AL E + LA+I+ RQ IS++YLEQLF++L+++GLVSSVRG GGY L +
Sbjct 11 VTAMLDVALHSQEGPVPLADISERQGISLSYLEQLFSRLRKNGLVSSVRGPGGGYLLGKD 70
Query 61 ATEITVLEIIEAVNETVDATRCDHKGNCQNGAMCLTHDLWQELSHHIADYLAKITLADLI 120
A+EI V E+I AV+E+VDATRC + CQ G CLTH LW++LS I +L+ I+L +L+
Sbjct 71 ASEIVVAEVIFAVDESVDATRCQGREGCQGGDRCLTHALWRDLSDRITGFLSSISLEELV 130
Query 121 ARDNVQTVALRQN 133
V VA RQ+
Sbjct 131 NNQEVLDVAGRQD 143
>A8AD51 HTH-type transcriptional regulator IscR [Citrobacter koseri
(strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)]
Length=163
Score = 139 bits (349), Expect = 2e-46
Identities = 70/134 (52%), Positives = 94/134 (70%), Gaps = 0/134 (0%)
Query 1 VTALLDLALQPTEQTITLAEIAARQSISVAYLEQLFAKLKRHGLVSSVRGANGGYHLARH 60
VTA+LD+AL + LA+I+ RQ IS++YLEQLF++L+++GLVSSVRG GGY L +
Sbjct 11 VTAMLDVALNSEAGPVPLADISERQGISLSYLEQLFSRLRKNGLVSSVRGPGGGYLLGKD 70
Query 61 ATEITVLEIIEAVNETVDATRCDHKGNCQNGAMCLTHDLWQELSHHIADYLAKITLADLI 120
A I V E+I AV+E+VDATRC KG CQ G CLTH LW++LS + +L ITL +L+
Sbjct 71 AGSIAVGEVISAVDESVDATRCQGKGGCQGGDKCLTHALWRDLSDRLTGFLNNITLGELV 130
Query 121 ARDNVQTVALRQNT 134
V V+ RQ+T
Sbjct 131 NNQEVLDVSDRQHT 144
>B5R5A3 HTH-type transcriptional regulator IscR [Salmonella enteritidis
PT4 (strain P125109)]
Length=164
Score = 139 bits (349), Expect = 3e-46
Identities = 70/134 (52%), Positives = 94/134 (70%), Gaps = 0/134 (0%)
Query 1 VTALLDLALQPTEQTITLAEIAARQSISVAYLEQLFAKLKRHGLVSSVRGANGGYHLARH 60
VTA+LD+AL + LA+I+ RQ IS++YLEQLF++L+++GLVSSVRG GGY L +
Sbjct 11 VTAMLDVALNSEAGPVPLADISERQGISLSYLEQLFSRLRKNGLVSSVRGPGGGYLLGKD 70
Query 61 ATEITVLEIIEAVNETVDATRCDHKGNCQNGAMCLTHDLWQELSHHIADYLAKITLADLI 120
A I V E+I AV+E+VDATRC KG CQ G CLTH LW++LS + +L ITL +L+
Sbjct 71 AGSIAVGEVISAVDESVDATRCQGKGGCQGGDKCLTHALWRDLSDRLTGFLNNITLGELV 130
Query 121 ARDNVQTVALRQNT 134
V V+ RQ+T
Sbjct 131 NNQEVLDVSGRQHT 144
>B5FR87 HTH-type transcriptional regulator IscR [Salmonella dublin
(strain CT_02021853)]
Length=164
Score = 139 bits (349), Expect = 3e-46
Identities = 70/134 (52%), Positives = 94/134 (70%), Gaps = 0/134 (0%)
Query 1 VTALLDLALQPTEQTITLAEIAARQSISVAYLEQLFAKLKRHGLVSSVRGANGGYHLARH 60
VTA+LD+AL + LA+I+ RQ IS++YLEQLF++L+++GLVSSVRG GGY L +
Sbjct 11 VTAMLDVALNSEAGPVPLADISERQGISLSYLEQLFSRLRKNGLVSSVRGPGGGYLLGKD 70
Query 61 ATEITVLEIIEAVNETVDATRCDHKGNCQNGAMCLTHDLWQELSHHIADYLAKITLADLI 120
A I V E+I AV+E+VDATRC KG CQ G CLTH LW++LS + +L ITL +L+
Sbjct 71 AGSIAVGEVISAVDESVDATRCQGKGGCQGGDKCLTHALWRDLSDRLTGFLNNITLGELV 130
Query 121 ARDNVQTVALRQNT 134
V V+ RQ+T
Sbjct 131 NNQEVLDVSGRQHT 144
>Q57LG8 HTH-type transcriptional regulator IscR [Salmonella choleraesuis
(strain SC-B67)]
Length=164
Score = 139 bits (349), Expect = 3e-46
Identities = 70/134 (52%), Positives = 94/134 (70%), Gaps = 0/134 (0%)
Query 1 VTALLDLALQPTEQTITLAEIAARQSISVAYLEQLFAKLKRHGLVSSVRGANGGYHLARH 60
VTA+LD+AL + LA+I+ RQ IS++YLEQLF++L+++GLVSSVRG GGY L +
Sbjct 11 VTAMLDVALNSEAGPVPLADISERQGISLSYLEQLFSRLRKNGLVSSVRGPGGGYLLGKD 70
Query 61 ATEITVLEIIEAVNETVDATRCDHKGNCQNGAMCLTHDLWQELSHHIADYLAKITLADLI 120
A I V E+I AV+E+VDATRC KG CQ G CLTH LW++LS + +L ITL +L+
Sbjct 71 AGSIAVGEVISAVDESVDATRCQGKGGCQGGDKCLTHALWRDLSDRLTGFLNNITLGELV 130
Query 121 ARDNVQTVALRQNT 134
V V+ RQ+T
Sbjct 131 NNQEVLDVSGRQHT 144
>A9MHJ3 HTH-type transcriptional regulator IscR [Salmonella arizonae
(strain ATCC BAA-731 / CDC346-86 / RSK2980)]
Length=164
Score = 139 bits (349), Expect = 3e-46
Identities = 70/134 (52%), Positives = 94/134 (70%), Gaps = 0/134 (0%)
Query 1 VTALLDLALQPTEQTITLAEIAARQSISVAYLEQLFAKLKRHGLVSSVRGANGGYHLARH 60
VTA+LD+AL + LA+I+ RQ IS++YLEQLF++L+++GLVSSVRG GGY L +
Sbjct 11 VTAMLDVALNSEAGPVPLADISERQGISLSYLEQLFSRLRKNGLVSSVRGPGGGYLLGKD 70
Query 61 ATEITVLEIIEAVNETVDATRCDHKGNCQNGAMCLTHDLWQELSHHIADYLAKITLADLI 120
A I V E+I AV+E+VDATRC KG CQ G CLTH LW++LS + +L ITL +L+
Sbjct 71 AGSIAVGEVISAVDESVDATRCQGKGGCQGGDKCLTHALWRDLSDRLTGFLNNITLGELV 130
Query 121 ARDNVQTVALRQNT 134
V V+ RQ+T
Sbjct 131 NNQEVLDVSGRQHT 144
>B5F1C1 HTH-type transcriptional regulator IscR [Salmonella agona
(strain SL483)]
Length=164
Score = 139 bits (349), Expect = 3e-46
Identities = 70/134 (52%), Positives = 94/134 (70%), Gaps = 0/134 (0%)
Query 1 VTALLDLALQPTEQTITLAEIAARQSISVAYLEQLFAKLKRHGLVSSVRGANGGYHLARH 60
VTA+LD+AL + LA+I+ RQ IS++YLEQLF++L+++GLVSSVRG GGY L +
Sbjct 11 VTAMLDVALNSEAGPVPLADISERQGISLSYLEQLFSRLRKNGLVSSVRGPGGGYLLGKD 70
Query 61 ATEITVLEIIEAVNETVDATRCDHKGNCQNGAMCLTHDLWQELSHHIADYLAKITLADLI 120
A I V E+I AV+E+VDATRC KG CQ G CLTH LW++LS + +L ITL +L+
Sbjct 71 AGSIAVGEVISAVDESVDATRCQGKGGCQGGDKCLTHALWRDLSDRLTGFLNNITLGELV 130
Query 121 ARDNVQTVALRQNT 134
V V+ RQ+T
Sbjct 131 NNQEVLDVSGRQHT 144
>P0A0Z0 Putative HTH-type transcriptional regulator NMB1378 [Neisseria
meningitidis serogroup B (strain MC58)]
Length=148
Score = 129 bits (325), Expect = 7e-43
Identities = 63/124 (51%), Positives = 84/124 (68%), Gaps = 0/124 (0%)
Query 1 VTALLDLALQPTEQTITLAEIAARQSISVAYLEQLFAKLKRHGLVSSVRGANGGYHLARH 60
VTA+LDLA+ + L+ I+ RQ+IS++YLEQLF KL+R GLV S+RG GGY LA
Sbjct 11 VTAMLDLAMNAQTGAVKLSAISERQNISLSYLEQLFGKLRRAGLVESLRGPGGGYILAAP 70
Query 61 ATEITVLEIIEAVNETVDATRCDHKGNCQNGAMCLTHDLWQELSHHIADYLAKITLADLI 120
A I + +II A + +DAT+C K NC +GA CLTHDLW+ L+ I DYL +TL +I
Sbjct 71 AARINIAQIIAAAEDRLDATQCGSKANCHHGAPCLTHDLWENLNKTINDYLGSVTLQSII 130
Query 121 ARDN 124
+ N
Sbjct 131 EQKN 134
>P33395 Protein rrf2 [Desulfovibrio vulgaris (strain ATCC 29579
/ DSM 644 / NCIMB 8303 / VKM B-1760 / Hildenborough)]
Length=150
Score = 88.2 bits (217), Expect = 1e-26
Identities = 47/118 (40%), Positives = 71/118 (60%), Gaps = 1/118 (1%)
Query 4 LLDLALQPTEQTITLAEIAARQSISVAYLEQLFAKLKRHGLVSSVRGANGGYHLARHATE 63
LLD+A+ +EQ +++ +IA RQ ISV YLE+L L++ G ++S GA+GGY LA A +
Sbjct 14 LLDIAMHGSEQPVSIKDIAQRQGISVKYLEKLIRVLRKAGYITSTLGAHGGYQLAHKAED 73
Query 64 ITVLEIIEAVNETVDATRCDHKGN-CQNGAMCLTHDLWQELSHHIADYLAKITLADLI 120
I V +++ A+ E CD + C A+CLT +W E + + L TLADL+
Sbjct 74 IPVGDVVYALEEMEAPVECDEENPCCPRMAVCLTRTIWGEAAKAMYRKLNTFTLADLM 131
>O34527 HTH-type transcriptional regulator CymR [Bacillus subtilis
(strain 168)]
Length=138
Score = 53.5 bits (127), Expect = 2e-13
Identities = 36/122 (30%), Positives = 57/122 (47%), Gaps = 12/122 (10%)
Query 1 VTALLDLALQPTEQTITLAEIAARQSISVAYLEQLFAKLKRHGLVSSVRGANGGYHLARH 60
+T +++LA + E +L IA ++S YLEQL + L+ GLV S+RGA GGY L
Sbjct 11 LTIMIELAKKHGEGPTSLKSIAQTNNLSEHYLEQLVSPLRNAGLVKSIRGAYGGYVLGSE 70
Query 61 ATEIT---VLEIIEAVNETVDATRCDHKGNCQNGAMCLTHDLWQELSHHIADYLAKITLA 117
IT ++ ++E V+ + +LW + + + L TL
Sbjct 71 PDAITAGDIIRVLEGPISPVEVLEDEEPAK---------RELWIRIRDAVKEVLDSTTLE 121
Query 118 DL 119
DL
Sbjct 122 DL 123
>Q9R9M8 Protein aau3 [Rhizobium meliloti (strain 1021)]
Length=154
Score = 51.2 bits (121), Expect = 2e-12
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 2/110 (2%)
Query 13 EQTITLAEIAARQSISVAYLEQLFAKLKRHGLVSSVRGANGGYHLARHATEITVLEIIEA 72
E+ + EIA +S +L ++ L R GLV +VRG NGG L R A+EIT+ ++++
Sbjct 22 EKLSRIPEIARAYGVSELFLFKILQPLTRAGLVETVRGRNGGVRLPRPASEITLFDVVKV 81
Query 73 VNETVDATRCDHKG--NCQNGAMCLTHDLWQELSHHIADYLAKITLADLI 120
++ C G +C C + ++ + + L T+ DL+
Sbjct 82 TEDSFAMAECFEAGEIDCPLVDSCGLNAALRKALNAFFEVLQGYTIDDLV 131
Lambda K H a alpha
0.323 0.134 0.384 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 302586
Database: 4bbd54b07a870bcc2473e50b47d71fe9.SwissProt.fasta
Posted date: May 20, 2024 9:36 PM
Number of letters in database: 3,540
Number of sequences in database: 22
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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