BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 05b8e8591394a30b42f93ba007227d2d.SwissProt.fasta
15 sequences; 3,549 total letters
Query= ACIAD1410
Length=307
Score E
Sequences producing significant alignments: (Bits) Value
O31249 HTH-type transcriptional regulator AlkR [Acinetobacter bay... 620 0.0
P77379 RCS-specific HTH-type transcriptional activator RclR [Esch... 127 4e-38
Q9WW32 HTH-type transcriptional regulator MtrA [Neisseria gonorrh... 102 6e-29
P35319 Putative AraC-like transcription regulator [Streptomyces l... 97.8 4e-27
Q03320 Putative AraC-like transcription regulator [Streptomyces a... 94.0 1e-25
P0A9E3 Regulatory protein SoxS [Escherichia coli O6:H1 (strain CF... 62.8 5e-16
P0A9E4 Regulatory protein SoxS [Escherichia coli O157:H7] 62.8 5e-16
P0A9E2 Regulatory protein SoxS [Escherichia coli (strain K12)] 62.8 5e-16
Q00753 Msm operon regulatory protein [Streptococcus mutans seroty... 65.1 1e-15
Q56143 Regulatory protein SoxS [Salmonella typhimurium (strain LT... 60.1 4e-15
Q51872 Probable transcriptional regulator LumQ [Photobacterium le... 61.6 1e-14
P43465 Raffinose operon transcriptional regulatory protein RafR [... 60.8 3e-14
P26993 HTH-type transcriptional regulator ExsA [Pseudomonas aerug... 55.1 3e-12
P0C2V5 Virulence regulon transcriptional activator VirF [Yersinia... 51.6 4e-11
P28808 Thermoregulatory protein LcrF [Yersinia pestis] 51.6 4e-11
>O31249 HTH-type transcriptional regulator AlkR [Acinetobacter
baylyi (strain ATCC 33305 / BD413 / ADP1)]
Length=306
Score = 620 bits (1598), Expect = 0.0
Identities = 306/306 (100%), Positives = 306/306 (100%), Gaps = 0/306 (0%)
Query 1 MDALSKIFDDIHLNKSEYLYVKTQGEWAFHMLAQDALIAHIILMGSAHFTLQDGTTQTAY 60
MDALSKIFDDIHLNKSEYLYVKTQGEWAFHMLAQDALIAHIILMGSAHFTLQDGTTQTAY
Sbjct 1 MDALSKIFDDIHLNKSEYLYVKTQGEWAFHMLAQDALIAHIILMGSAHFTLQDGTTQTAY 60
Query 61 SGDIVLIPSGQAHFVSNDAQNKLIDCSNIQSFFDGHRNDAIELGTTSSDHGLIFTVRSHI 120
SGDIVLIPSGQAHFVSNDAQNKLIDCSNIQSFFDGHRNDAIELGTTSSDHGLIFTVRSHI
Sbjct 61 SGDIVLIPSGQAHFVSNDAQNKLIDCSNIQSFFDGHRNDAIELGTTSSDHGLIFTVRSHI 120
Query 121 DMHMGSPLLNALPSLIHIHHAMSSTGPEWLRVGLYFVALETQRIQPGRDKIFDHLMSILF 180
DMHMGSPLLNALPSLIHIHHAMSSTGPEWLRVGLYFVALETQRIQPGRDKIFDHLMSILF
Sbjct 121 DMHMGSPLLNALPSLIHIHHAMSSTGPEWLRVGLYFVALETQRIQPGRDKIFDHLMSILF 180
Query 181 IECVRDHIAQLDDPKSWLTALMHPELSNALAAIHAYPEKPWTVESLADQCCMSRSKFATL 240
IECVRDHIAQLDDPKSWLTALMHPELSNALAAIHAYPEKPWTVESLADQCCMSRSKFATL
Sbjct 181 IECVRDHIAQLDDPKSWLTALMHPELSNALAAIHAYPEKPWTVESLADQCCMSRSKFATL 240
Query 241 FQSIVHETPLAYLQQHRLRLAVQLLKTSQLNIQQIANKVGYSSETAFSQAFKRQFEQSPK 300
FQSIVHETPLAYLQQHRLRLAVQLLKTSQLNIQQIANKVGYSSETAFSQAFKRQFEQSPK
Sbjct 241 FQSIVHETPLAYLQQHRLRLAVQLLKTSQLNIQQIANKVGYSSETAFSQAFKRQFEQSPK 300
Query 301 HYRQQS 306
HYRQQS
Sbjct 301 HYRQQS 306
>P77379 RCS-specific HTH-type transcriptional activator RclR [Escherichia
coli (strain K12)]
Length=284
Score = 127 bits (318), Expect = 4e-38
Identities = 80/267 (30%), Positives = 126/267 (47%), Gaps = 31/267 (12%)
Query 40 HIILMGSAHFTLQDGTTQTAYSGDIVLIPSGQAHFVSN-DAQNKLIDCSNIQSFFDGHRN 98
H + G+A + G T G++VL+P AH +S+ D ++ I C ++
Sbjct 42 HALTQGAAKLEMPTGEIFTLRPGNVVLLPQNSAHRLSHVDNESTCIVCGTLRL------- 94
Query 99 DAIELGTTSSDHGLIFTVRSHIDMHMGSPLLNALPSLIHIHHAMSSTGPEWLRVGLYFVA 158
H L +LP + + S WLR + F+
Sbjct 95 -----------------------QHSARYFLTSLPETLFLAPVNHSVEYNWLREAIPFLQ 131
Query 159 LETQRIQPGRDKIFDHLMSILFIECVRDHIAQLDDPKSWLTALMHPELSNALAAIHAYPE 218
E++ PG D + + + F VR+ IAQ++ K+ L+ L+HP L + + P
Sbjct 132 QESRSAMPGVDALCSQICATFFTLAVREWIAQVNTEKNILSLLLHPRLGAVIQQMLEMPG 191
Query 219 KPWTVESLADQCCMSRSKFATLFQSIVHETPLAYLQQHRLRLAVQLLKTSQLNIQQIANK 278
WTVESLA MSR+ FA LF+ + TPLA L + RL++A Q+ L + IA
Sbjct 192 HAWTVESLASIAHMSRASFAQLFRDVSGTTPLAVLTKLRLQIAAQMFSRETLPVVVIAES 251
Query 279 VGYSSETAFSQAFKRQFEQSPKHYRQQ 305
VGY+SE++F +AF R+F +P YR++
Sbjct 252 VGYASESSFHKAFVREFGCTPGEYRER 278
>Q9WW32 HTH-type transcriptional regulator MtrA [Neisseria gonorrhoeae]
Length=301
Score = 102 bits (255), Expect = 6e-29
Identities = 84/315 (27%), Positives = 146/315 (46%), Gaps = 28/315 (9%)
Query 1 MDALSKIFDDIHLNKSEYLYVKTQGEWAF-HMLAQDALIAHIILMGSAHFTLQDGTT-QT 58
MD L K+ D L S + G+W+ H Q + HI+ GS + + T+ +
Sbjct 1 MDILDKLVDLAQLTGSADVQCLLGGQWSVRHETLQCEGLVHIVTAGSGYLCIDGETSPRP 60
Query 59 AYSGDIVLIPSGQAHFVSNDAQNKLIDCSNIQSFFDGHRNDAIELGT---TSSDHGL--- 112
+GDIV P G H +S+D + + + + D + GT +GL
Sbjct 61 VGTGDIVFFPRGLGHVLSHDGK-----------YGESLQPDIRQNGTFMVKQCGNGLDMS 109
Query 113 IFTVRSHIDMHMGSPLLNALPSLIHIHHAMSSTGPEWLRVGLYFVALETQRIQPGRDKIF 172
+F R D H + L+N LP + ++ A S L+ + + LE+++ G +
Sbjct 110 LFCARFRYDTH--ADLMNGLPETVFLNIAHPS-----LQYVVSMLQLESEKPLTGTVSVV 162
Query 173 DHLMSILFIECVRDHIAQLDDPK--SWLTALMHPELSNALAAIHAYPEKPWTVESLADQC 230
+ L S+L + +R ++ Q D + L L + + + PE W ++ +
Sbjct 163 NALPSVLLVLILRAYLEQDKDVELSGVLKGWQDKRLGHLIQKVIDKPEDEWNIDKMVAAA 222
Query 231 CMSRSKFATLFQSIVHETPLAYLQQHRLRLAVQLLKTSQLNIQQIANKVGYSSETAFSQA 290
MSR++ F+S V +P A++ RL+ LLK + ++ ++A VG+ SET F +A
Sbjct 223 NMSRAQLMRRFKSQVGLSPHAFVNHIRLQKGALLLKKTPDSVLEVALSVGFQSETHFGKA 282
Query 291 FKRQFEQSPKHYRQQ 305
FKRQ+ SP YR++
Sbjct 283 FKRQYHVSPGQYRKE 297
>P35319 Putative AraC-like transcription regulator [Streptomyces
lividans]
Length=304
Score = 97.8 bits (242), Expect = 4e-27
Identities = 59/178 (33%), Positives = 89/178 (50%), Gaps = 3/178 (2%)
Query 128 LLNALPSLIHIHHAMSSTGPEWLRVGLYFVALETQRIQPGRDKIFDHLMSILFIECVRDH 187
LL+ LP ++H+ + E ++ L + E I +HL I+ + +R H
Sbjct 124 LLDRLPPIVHV--PADTPHAETVQWALTAIDQELTHRPMASTLIAEHLAVIMLVHVLRLH 181
Query 188 IAQLDDPKS-WLTALMHPELSNALAAIHAYPEKPWTVESLADQCCMSRSKFATLFQSIVH 246
+ + S WL L P ++ AL +H P + WTV LAD +SRS A F++ V
Sbjct 182 LERAPHAVSGWLAGLADPVVATALTCLHRDPARSWTVADLADTAAVSRSTLAARFKATVG 241
Query 247 ETPLAYLQQHRLRLAVQLLKTSQLNIQQIANKVGYSSETAFSQAFKRQFEQSPKHYRQ 304
+ PL YL + R+ LA + L+ + IA+ VGY SE+A S AFKR P YR+
Sbjct 242 QGPLEYLTRWRIELAARQLREGNATLASIAHSVGYGSESALSVAFKRVLGMPPGDYRK 299
>Q03320 Putative AraC-like transcription regulator [Streptomyces
antibioticus]
Length=303
Score = 94.0 bits (232), Expect = 1e-25
Identities = 58/183 (32%), Positives = 90/183 (49%), Gaps = 3/183 (2%)
Query 123 HMGSPLLNALPSLIHIHHAMSSTGPEWLRVGLYFVALETQRIQPGRDKIFDHLMSILFIE 182
H LL+ LP ++H+ + E ++ L + E + +HL ++ I
Sbjct 119 HAQELLLDNLPPVVHV--PAGTPHAEAVQWALTAIDQELTHQPMASTLVAEHLAVVMLIH 176
Query 183 CVRDHIAQLDDPKS-WLTALMHPELSNALAAIHAYPEKPWTVESLADQCCMSRSKFATLF 241
+R H+ + D S WL L P +++AL +H P WTV LA +SRS A F
Sbjct 177 VLRLHLERAPDAVSGWLAGLADPVVASALTFLHRDPAHSWTVAELASAAAVSRSTLAARF 236
Query 242 QSIVHETPLAYLQQHRLRLAVQLLKTSQLNIQQIANKVGYSSETAFSQAFKRQFEQSPKH 301
++ V + PL YL + R+ L + L+ + IA+ VGY SE+A S AFKR +P
Sbjct 237 KATVGQGPLEYLTRWRIELTARQLREGSAPLAAIAHSVGYGSESALSVAFKRVLGMNPGD 296
Query 302 YRQ 304
YR+
Sbjct 297 YRK 299
>P0A9E3 Regulatory protein SoxS [Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC)]
Length=107
Score = 62.8 bits (151), Expect = 5e-16
Identities = 31/100 (31%), Positives = 60/100 (60%), Gaps = 0/100 (0%)
Query 206 LSNALAAIHAYPEKPWTVESLADQCCMSRSKFATLFQSIVHETPLAYLQQHRLRLAVQLL 265
+ + +A I + ++P ++ +A + S+ +F+++ H+T Y++Q RL LA L
Sbjct 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66
Query 266 KTSQLNIQQIANKVGYSSETAFSQAFKRQFEQSPKHYRQQ 305
+T++ I IA +GY S+ FS+ F+RQF+++P YR +
Sbjct 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106
>P0A9E4 Regulatory protein SoxS [Escherichia coli O157:H7]
Length=107
Score = 62.8 bits (151), Expect = 5e-16
Identities = 31/100 (31%), Positives = 60/100 (60%), Gaps = 0/100 (0%)
Query 206 LSNALAAIHAYPEKPWTVESLADQCCMSRSKFATLFQSIVHETPLAYLQQHRLRLAVQLL 265
+ + +A I + ++P ++ +A + S+ +F+++ H+T Y++Q RL LA L
Sbjct 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66
Query 266 KTSQLNIQQIANKVGYSSETAFSQAFKRQFEQSPKHYRQQ 305
+T++ I IA +GY S+ FS+ F+RQF+++P YR +
Sbjct 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106
>P0A9E2 Regulatory protein SoxS [Escherichia coli (strain K12)]
Length=107
Score = 62.8 bits (151), Expect = 5e-16
Identities = 31/100 (31%), Positives = 60/100 (60%), Gaps = 0/100 (0%)
Query 206 LSNALAAIHAYPEKPWTVESLADQCCMSRSKFATLFQSIVHETPLAYLQQHRLRLAVQLL 265
+ + +A I + ++P ++ +A + S+ +F+++ H+T Y++Q RL LA L
Sbjct 7 IQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVEL 66
Query 266 KTSQLNIQQIANKVGYSSETAFSQAFKRQFEQSPKHYRQQ 305
+T++ I IA +GY S+ FS+ F+RQF+++P YR +
Sbjct 67 RTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHR 106
>Q00753 Msm operon regulatory protein [Streptococcus mutans serotype
c (strain ATCC 700610 / UA159)]
Length=278
Score = 65.1 bits (157), Expect = 1e-15
Identities = 71/297 (24%), Positives = 125/297 (42%), Gaps = 35/297 (12%)
Query 9 DDIHLNKSEYLYVKTQGEWAFHMLAQDALIAHIILMGSAHFTLQDGTTQTAYSGDIVLIP 68
++ L+ Y K ++F +D + H IL G T+ T A +GDI L+P
Sbjct 13 NNFDLSVDHYGSEKCDRGYSFGPTIRDNYVIHFILEGKGKLTINQHTLDLA-AGDIFLLP 71
Query 69 SGQAHFVSNDAQNKLIDCSNIQSFFDGHRNDAIELGTTSSDHGLIFTVRSHIDMHMGSPL 128
+ F D Q + S I F G + + I ++ + RS S L
Sbjct 72 KDISTFYQADLQ---MPWSYIWIGFSGSKAENILKQSSLFKRFYCHSGRS-------SKL 121
Query 129 LNALPSLIHIHHAMSSTGPEWLRVGLYFVALETQRIQPGRDKIFDHLMSILFIECVRDHI 188
+ + ++I + ++ E L VG + L++ L E H
Sbjct 122 FSQMMTIIQFANTPLTSVNELLMVGELY-----------------KLLAALIEEFPLSH- 163
Query 189 AQLDDPKSWLTALMHPELSNALAAIHAYPEKPWTVESLADQCCMSRSKFATLFQSIVHET 248
L++ S A ++ IH+ V +A + +SRS +F+ + +
Sbjct 164 --LEESNSSTKAYVN----QVKKIIHSQYGSSLRVNDIAKKLNLSRSYLYKIFRKSTNLS 217
Query 249 PLAYLQQHRLRLAVQLLKTSQLNIQQIANKVGYSSETAFSQAFKRQFEQSPKHYRQQ 305
Y+ Q R++ + LL+ +L+I +I+N VG+S AFS+AFK F +SP +R++
Sbjct 218 IKEYILQVRMKRSQYLLENPKLSIAEISNSVGFSDSLAFSKAFKNYFGKSPSKFRKE 274
>Q56143 Regulatory protein SoxS [Salmonella typhimurium (strain
LT2 / SGSC1412 / ATCC 700720)]
Length=107
Score = 60.1 bits (144), Expect = 4e-15
Identities = 29/93 (31%), Positives = 56/93 (60%), Gaps = 0/93 (0%)
Query 213 IHAYPEKPWTVESLADQCCMSRSKFATLFQSIVHETPLAYLQQHRLRLAVQLLKTSQLNI 272
I + ++P ++ +A + S+ +F+++ H+T Y++Q RL LA L+T++ I
Sbjct 14 IDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGEYIRQRRLLLAAVELRTTERPI 73
Query 273 QQIANKVGYSSETAFSQAFKRQFEQSPKHYRQQ 305
IA +GY S+ FS+ F+R+F+++P YR +
Sbjct 74 FDIAMDLGYVSQQTFSRVFRREFDRTPSDYRHR 106
Score = 16.9 bits (32), Expect = 5.4
Identities = 8/21 (38%), Positives = 11/21 (52%), Gaps = 0/21 (0%)
Query 108 SDHGLIFTVRSHIDMHMGSPL 128
S +I T+ ID H+ PL
Sbjct 2 SHQQIIQTLIEWIDEHIDQPL 22
>Q51872 Probable transcriptional regulator LumQ [Photobacterium
leiognathi]
Length=248
Score = 61.6 bits (148), Expect = 1e-14
Identities = 33/91 (36%), Positives = 55/91 (60%), Gaps = 0/91 (0%)
Query 213 IHAYPEKPWTVESLADQCCMSRSKFATLFQSIVHETPLAYLQQHRLRLAVQLLKTSQLNI 272
I + +K +V L+ +++S+F LF+S + TP Y+ + RL LA QL+ Q +
Sbjct 154 IEQHLQKKISVAELSSVAFLAQSQFYALFKSQMGITPHQYVLRKRLDLAKQLIAERQKPL 213
Query 273 QQIANKVGYSSETAFSQAFKRQFEQSPKHYR 303
Q+A G+SS+++FSQAF+R + SP Y+
Sbjct 214 SQVAQLCGFSSQSSFSQAFRRLYGMSPTRYQ 244
>P43465 Raffinose operon transcriptional regulatory protein RafR
[Pediococcus pentosaceus]
Length=277
Score = 60.8 bits (146), Expect = 3e-14
Identities = 69/274 (25%), Positives = 113/274 (41%), Gaps = 40/274 (15%)
Query 34 QDALIAHIILMGSAHFTLQDGTTQTAYSGDIVLIPSGQAHF--VSNDAQNKLIDCSNIQS 91
+D+ + H I G F + +GDI ++P G F ND K
Sbjct 37 RDSYVIHYIQEGKGTFAAANHPATVLKAGDIFILPKGTPCFYQADNDQPWKYFWIG---- 92
Query 92 FFDGHRNDAIELGTTSSDHGLIFTVRS-HIDMHMGSPLLNALPSLIHIHHAMSSTGPEWL 150
F G R +A+ G+ + + V++ HI L+ L ++HI +++ +
Sbjct 93 FSAGIRIEAMLSGSLLAQKCYLRQVQNGHIYAD-----LSELYKVLHIPNSLIN------ 141
Query 151 RVGLYFVALETQRIQPGRDKIFDHLMSILFIECVRDHIAQLDDPKSWLTALMHPELSNAL 210
D + L+ LF + +R + A + K T + + A+
Sbjct 142 ------------------DVLLGSLIYRLFYDLLRWYPADATNIKVKSTE----QFNLAV 179
Query 211 AAIHAYPEKPWTVESLADQCCMSRSKFATLFQSIVHETPLAYLQQHRLRLAVQLLKTSQL 270
+ + T+ L +SRS TLF++ + +P L + RL A Q L TS
Sbjct 180 SYLQENYSTGCTIMDLCHYLNLSRSYLYTLFKTHANTSPQKLLTKLRLEDAKQRLSTSNN 239
Query 271 NIQQIANKVGYSSETAFSQAFKRQFEQSPKHYRQ 304
++Q IAN VGY FS+AFKR SP +YR+
Sbjct 240 SVQSIANMVGYKDSFTFSKAFKRYSGASPSYYRK 273
>P26993 HTH-type transcriptional regulator ExsA [Pseudomonas aeruginosa
(strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM
14847 / LMG 12228 / 1C / PRS 101 / PAO1)]
Length=278
Score = 55.1 bits (131), Expect = 3e-12
Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 0/84 (0%)
Query 221 WTVESLADQCCMSRSKFATLFQSIVHETPLAYLQQHRLRLAVQLLKTSQLNIQQIANKVG 280
W + + + M + F LF S+ +P A++ + R+ A QLL S ++I IA + G
Sbjct 185 WKLSDFSREFGMGLTTFKELFGSVYGVSPRAWISERRILYAHQLLLNSDMSIVDIAMEAG 244
Query 281 YSSETAFSQAFKRQFEQSPKHYRQ 304
+SS++ F+Q+++R+F +P RQ
Sbjct 245 FSSQSYFTQSYRRRFGCTPSRSRQ 268
Score = 18.9 bits (37), Expect = 1.7
Identities = 7/17 (41%), Positives = 11/17 (65%), Gaps = 0/17 (0%)
Query 10 DIHLNKSEYLYVKTQGE 26
+ +NK E +YV +GE
Sbjct 23 EYRVNKEEGVYVLLEGE 39
>P0C2V5 Virulence regulon transcriptional activator VirF [Yersinia
enterocolitica]
Length=271
Score = 51.6 bits (122), Expect = 4e-11
Identities = 25/83 (30%), Positives = 48/83 (58%), Gaps = 0/83 (0%)
Query 221 WTVESLADQCCMSRSKFATLFQSIVHETPLAYLQQHRLRLAVQLLKTSQLNIQQIANKVG 280
W + A + M + F LF ++ +P A++ + R+ A QLL +++I IA + G
Sbjct 181 WKLSKFAREFGMGLTTFKELFGTVYGISPRAWISERRILYAHQLLLNGKMSIVDIAMEAG 240
Query 281 YSSETAFSQAFKRQFEQSPKHYR 303
+SS++ F+Q+++R+F +P R
Sbjct 241 FSSQSYFTQSYRRRFGCTPSQAR 263
>P28808 Thermoregulatory protein LcrF [Yersinia pestis]
Length=271
Score = 51.6 bits (122), Expect = 4e-11
Identities = 25/83 (30%), Positives = 48/83 (58%), Gaps = 0/83 (0%)
Query 221 WTVESLADQCCMSRSKFATLFQSIVHETPLAYLQQHRLRLAVQLLKTSQLNIQQIANKVG 280
W + A + M + F LF ++ +P A++ + R+ A QLL +++I IA + G
Sbjct 181 WKLSKFAREFGMGLTTFKELFGTVYGISPRAWISERRILYAHQLLLNGKMSIVDIAMEAG 240
Query 281 YSSETAFSQAFKRQFEQSPKHYR 303
+SS++ F+Q+++R+F +P R
Sbjct 241 FSSQSYFTQSYRRRFGCTPSQAR 263
Lambda K H a alpha
0.324 0.135 0.407 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 766656
Database: 05b8e8591394a30b42f93ba007227d2d.SwissProt.fasta
Posted date: May 21, 2024 12:05 AM
Number of letters in database: 3,549
Number of sequences in database: 15
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
