BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 7b47e42c3901002902759bcc8be5b6e7.SwissProt.fasta
           2 sequences; 279 total letters



Query= ACIAD1416

Length=119
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q02009 Uncharacterized protein YpaA [Lactococcus lactis subsp. la...  53.1    8e-15
Q00607 V-type proton ATPase subunit c [Candida tropicalis]            33.1    4e-07


>Q02009 Uncharacterized protein YpaA [Lactococcus lactis subsp. 
lactis (strain IL1403)]
Length=119

 Score = 53.1 bits (126),  Expect = 8e-15
 Identities = 33/114 (29%), Positives = 64/114 (56%), Gaps = 4/114 (4%)

Query  2    IAHIIVALIGSLHI-YILVLEMFLWDQPRGLKAFGNSVEKARMT--KTLAQNQGLYNGFL  58
            I  II++L+ +L   YI+ LE F        + F    E+   +  +TL +NQG+YNG +
Sbjct  3    ILTIILSLLVALEFFYIMYLETFATSSKTTSRVFNMGKEELERSSVQTLFKNQGIYNGLI  62

Query  59   AAGLFWSLWVDAPLFAMLANFFLGCVLIAGIFGAYTASRKILFIQAIPALIALI  112
              GL ++++  +    ++    +  +L+A ++G+ T+++KI+  Q   A++ALI
Sbjct  63   GLGLIYAIFFSSAQLEIVRLLLIYIILVA-LYGSLTSNKKIILTQGGLAILALI  115


 Score = 16.9 bits (32),  Expect = 0.14
 Identities = 8/13 (62%), Positives = 10/13 (77%), Gaps = 0/13 (0%)

Query  1   MIAHIIVALIGSL  13
           +I  I+VAL GSL
Sbjct  84  LIYIILVALYGSL  96


>Q00607 V-type proton ATPase subunit c [Candida tropicalis]
Length=160

 Score = 33.1 bits (74),  Expect = 4e-07
 Identities = 27/80 (34%), Positives = 39/80 (49%), Gaps = 6/80 (8%)

Query  30   GLKAFGNSVEKARMTKTLAQNQGLYNGFLAAGLFWSLWVDAPLFAMLANFFLGCVLIAGI  89
            G+ A    V    ++ +L+Q Q LY GF+  G   S+     L  + A F +G V  AG+
Sbjct  61   GIIAIYGLVVSVLVSDSLSQKQALYTGFIQLGAGLSV----GLSGLAAGFAIGIVGDAGV  116

Query  90   FGAYTASRKILFIQAIPALI  109
             G  TA +  LF+  I  LI
Sbjct  117  RG--TAQQPRLFVGMILILI  134


 Score = 15.8 bits (29),  Expect = 0.38
 Identities = 6/19 (32%), Positives = 10/19 (53%), Gaps = 0/19 (0%)

Query  83   CVLIAGIFGAYTASRKILF  101
            C + A  FG+   +  I+F
Sbjct  5    CPVYAPFFGSIGCAAAIVF  23



Lambda      K        H        a         alpha
   0.338    0.148    0.482    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 24100


  Database: 7b47e42c3901002902759bcc8be5b6e7.SwissProt.fasta
    Posted date:  Jun 1, 2024  11:16 PM
  Number of letters in database: 279
  Number of sequences in database:  2



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40