BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: a8a324f46f6d31a99edc6e7d70eebb2b.TrEMBL.fasta
1 sequences; 50 total letters
Query= ACIAD1542
Length=51
Score E
Sequences producing significant alignments: (Bits) Value
Q6FC16 Uncharacterized protein [Acinetobacter baylyi (strain ATCC... 103 2e-37
>Q6FC16 Uncharacterized protein [Acinetobacter baylyi (strain
ATCC 33305 / BD413 / ADP1)]
Length=50
Score = 103 bits (258), Expect = 2e-37
Identities = 49/50 (98%), Positives = 50/50 (100%), Gaps = 0/50 (0%)
Query 1 LIVTQRHADILVREGDTVFPVQTTYQSLIKNNSFIMWQECTRKNRKGVRV 50
+IVTQRHADILVREGDTVFPVQTTYQSLIKNNSFIMWQECTRKNRKGVRV
Sbjct 1 MIVTQRHADILVREGDTVFPVQTTYQSLIKNNSFIMWQECTRKNRKGVRV 50
Lambda K H a alpha
0.336 0.143 0.448 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 2352
Database: a8a324f46f6d31a99edc6e7d70eebb2b.TrEMBL.fasta
Posted date: May 20, 2024 10:31 PM
Number of letters in database: 50
Number of sequences in database: 1
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40