BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 72421956c6d97191605b295b36f4981f.SwissProt.fasta
20 sequences; 6,413 total letters
Query= ACIAD1587
Length=272
Score E
Sequences producing significant alignments: (Bits) Value
Q57855 Uncharacterized ABC transporter ATP-binding protein MJ0412... 248 1e-85
Q81C68 Aliphatic sulfonates import ATP-binding protein SsuB [Baci... 242 1e-83
A0RFA4 Aliphatic sulfonates import ATP-binding protein SsuB [Baci... 238 5e-82
Q6HHI7 Aliphatic sulfonates import ATP-binding protein SsuB [Baci... 238 5e-82
Q81P94 Aliphatic sulfonates import ATP-binding protein SsuB [Baci... 238 8e-82
Q63A38 Aliphatic sulfonates import ATP-binding protein SsuB [Baci... 237 1e-81
Q736E0 Aliphatic sulfonates import ATP-binding protein SsuB [Baci... 237 2e-81
Q65M64 Aliphatic sulfonates import ATP-binding protein SsuB [Baci... 234 1e-80
P97027 Aliphatic sulfonates import ATP-binding protein SsuB [Baci... 224 1e-76
Q2YJB5 Putative ATP-binding protein BAB2_1147 [Brucella abortus (... 209 1e-70
Q8FUN3 Putative ATP-binding protein BRA1187/BS1330_II1178 [Brucel... 209 1e-70
Q55107 Bicarbonate transport ATP-binding protein CmpC [Synechococ... 211 4e-67
P38045 Nitrate import ATP-binding protein NrtC [Synechococcus elo... 209 3e-66
Q55462 Bicarbonate transport ATP-binding protein CmpC [Synechocys... 207 1e-65
P38046 Nitrate import ATP-binding protein NrtD [Synechococcus elo... 191 3e-63
P39459 Nitrate transport protein NasD [Klebsiella oxytoca] 187 4e-62
Q55108 Bicarbonate transport ATP-binding protein CmpD [Synechococ... 187 1e-61
Q55463 Bicarbonate transport ATP-binding protein CmpD [Synechocys... 183 3e-60
Q8KZQ6 Aliphatic sulfonates import ATP-binding protein SsuB [Pseu... 175 3e-57
Q47538 Taurine import ATP-binding protein TauB [Escherichia coli ... 174 6e-57
>Q57855 Uncharacterized ABC transporter ATP-binding protein MJ0412
[Methanocaldococcus jannaschii (strain ATCC 43067 / DSM
2661 / JAL-1 / JCM 10045 / NBRC 100440)]
Length=267
Score = 248 bits (633), Expect = 1e-85
Identities = 118/248 (48%), Positives = 177/248 (71%), Gaps = 0/248 (0%)
Query 21 QTRVAFHHVHKSFVVNQQPVKVIHDFNLEIKEGEFIAIVGSSGCGKSTLLRLLAGLDQDF 80
+ ++ ++ K F N VK + + NLE+ E EF+ ++G SGCGK+TLLR++AGLD
Sbjct 14 KVKLKVENLTKIFEFNGNRVKALDNINLEVYENEFLTVMGPSGCGKTTLLRIIAGLDYPT 73
Query 81 DGRILIDGADVSGIGGDRAVVFQEHRLFPWLTVEQNIELGLLNEVLTARDKDILVQKAIE 140
+G++L+DG +V G G DR VVFQ++ L PW TV +N+ GL + + ++ + +K I+
Sbjct 74 EGKVLLDGKEVKGPGADRGVVFQQYTLMPWRTVLKNVTFGLELKGIPKNERIEIAKKFIK 133
Query 141 LIGLNGFEKAYPHQLSGGMSQRVAIARSLVVQPRIFLLDEPFGALDALTRHQMQNELLRI 200
++GL GFE AYP+QLSGGM QRVAIAR+L P I L+DEPF ALDA TR+ +QNELL+I
Sbjct 134 MVGLEGFEDAYPYQLSGGMQQRVAIARTLANDPEIVLMDEPFAALDAQTRNILQNELLKI 193
Query 201 QSQQKMTTVFITHDVEEAVTLADRVVILKPKPGRVEQIIPVNLPRPRNRSSFELHQLKEQ 260
++K T F+TH V+EAV L+DRVV+L +PGR+++I+ ++L RPR+R+S E + +++
Sbjct 194 WQKEKKTVFFVTHSVDEAVYLSDRVVVLTARPGRIKEIVKIDLERPRDRTSIEFLEYRKK 253
Query 261 IFRILTED 268
I IL ++
Sbjct 254 ILNILKDE 261
>Q81C68 Aliphatic sulfonates import ATP-binding protein SsuB [Bacillus
cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM
2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)]
Length=251
Score = 242 bits (618), Expect = 1e-83
Identities = 113/240 (47%), Positives = 171/240 (71%), Gaps = 3/240 (1%)
Query 24 VAFHHVHKSFVVNQQPVKVIHDFNLEIKEGEFIAIVGSSGCGKSTLLRLLAGLDQDFDGR 83
V+ V K F+ V+V+ + N +++EG+F+ ++G SGCGKSTLL+++AGLD DF+G
Sbjct 3 VSIDGVSKYFLKQTGTVQVLENINFQLEEGDFVTVIGPSGCGKSTLLKIVAGLDNDFEGE 62
Query 84 ILIDGADVSGIGGDRAVVFQEHRLFPWLTVEQNIELGLLNEVLTARDKDILVQKAIELIG 143
++IDG + + +FQEHRLFPWLTVE+NI L + +DK V++ +E++
Sbjct 63 VVIDGEPILKTSKKQGFIFQEHRLFPWLTVEENIAADLSLKDKYVKDK---VREWVEIVR 119
Query 144 LNGFEKAYPHQLSGGMSQRVAIARSLVVQPRIFLLDEPFGALDALTRHQMQNELLRIQSQ 203
L+GFEK+YP ++SGGMSQRVAIAR+L+ P + LLDEPFGALDA TR +Q LL I Q
Sbjct 120 LDGFEKSYPKEISGGMSQRVAIARALLRDPNVLLLDEPFGALDAFTRSHLQEVLLNIWEQ 179
Query 204 QKMTTVFITHDVEEAVTLADRVVILKPKPGRVEQIIPVNLPRPRNRSSFELHQLKEQIFR 263
+K T +F+THD++EA+ L++R++I+ KPG++ ++I NLP PRN++S QL+ ++ +
Sbjct 180 KKTTMIFVTHDIDEAIYLSNRIIIMSAKPGKIHKVIENNLPYPRNKTSQSFQQLRTKVLQ 239
>A0RFA4 Aliphatic sulfonates import ATP-binding protein SsuB [Bacillus
thuringiensis (strain Al Hakam)]
Length=251
Score = 238 bits (607), Expect = 5e-82
Identities = 111/240 (46%), Positives = 172/240 (72%), Gaps = 3/240 (1%)
Query 24 VAFHHVHKSFVVNQQPVKVIHDFNLEIKEGEFIAIVGSSGCGKSTLLRLLAGLDQDFDGR 83
V + V K F V+V+ + N ++++G+F+ ++G SGCGKSTLL+++AGLD DF+G
Sbjct 3 VLINEVSKYFSKQTGTVQVLENINFQLEKGDFVTVIGPSGCGKSTLLKIVAGLDNDFEGE 62
Query 84 ILIDGADVSGIGGDRAVVFQEHRLFPWLTVEQNIELGLLNEVLTARDKDILVQKAIELIG 143
I+IDG ++ + +FQEHRLFPWLTVE+NI L + +DK V++ +E++
Sbjct 63 IIIDGERITKPSKKQGFIFQEHRLFPWLTVEENIAADLSLKDKYVKDK---VKEWVEIVR 119
Query 144 LNGFEKAYPHQLSGGMSQRVAIARSLVVQPRIFLLDEPFGALDALTRHQMQNELLRIQSQ 203
L+GFEK+YP ++SGGMSQRVAIAR+L+ P + LLDEPFGALDA TR +Q LL I Q
Sbjct 120 LDGFEKSYPKEISGGMSQRVAIARALLRDPSVLLLDEPFGALDAFTRSHLQEVLLNIWEQ 179
Query 204 QKMTTVFITHDVEEAVTLADRVVILKPKPGRVEQIIPVNLPRPRNRSSFELHQLKEQIFR 263
+K T +F+THD++EA+ L++R+VI+ KPG++ ++I NLP PR+++S ++++++ +
Sbjct 180 KKTTMIFVTHDIDEAIYLSNRIVIMSAKPGKIHKVIENNLPYPRSKTSESFQEIRKKVLQ 239
>Q6HHI7 Aliphatic sulfonates import ATP-binding protein SsuB [Bacillus
thuringiensis subsp. konkukian (strain 97-27)]
Length=251
Score = 238 bits (607), Expect = 5e-82
Identities = 113/240 (47%), Positives = 170/240 (71%), Gaps = 3/240 (1%)
Query 24 VAFHHVHKSFVVNQQPVKVIHDFNLEIKEGEFIAIVGSSGCGKSTLLRLLAGLDQDFDGR 83
V+ + V K F V+V+ + N ++++G+F+ ++G SGCGKSTLL+++AGLD DF+G
Sbjct 3 VSINEVSKYFSKQTGTVQVLENINFQLEKGDFVTVIGPSGCGKSTLLKIVAGLDNDFEGE 62
Query 84 ILIDGADVSGIGGDRAVVFQEHRLFPWLTVEQNIELGLLNEVLTARDKDILVQKAIELIG 143
I+IDG ++ + +FQEHRLFPWLTVE+NI L + +DK V++ +E++
Sbjct 63 IIIDGERITKPSKKQGFIFQEHRLFPWLTVEENIAADLSLKDKYVKDK---VKEWVEIVR 119
Query 144 LNGFEKAYPHQLSGGMSQRVAIARSLVVQPRIFLLDEPFGALDALTRHQMQNELLRIQSQ 203
L+GFEK+YP ++SGGMSQRVAIAR+L+ P + LLDEPFGALDA TR +Q LL I Q
Sbjct 120 LDGFEKSYPKEISGGMSQRVAIARALLRDPSVLLLDEPFGALDAFTRSHLQEVLLNIWEQ 179
Query 204 QKMTTVFITHDVEEAVTLADRVVILKPKPGRVEQIIPVNLPRPRNRSSFELHQLKEQIFR 263
+K T +F+THD++EA+ L++R+VI+ KPG + ++I NL PRN++S QL+ ++ +
Sbjct 180 KKTTMIFVTHDIDEAIYLSNRIVIMSAKPGEIHKVIENNLSYPRNKTSQSFQQLRTKVLQ 239
>Q81P94 Aliphatic sulfonates import ATP-binding protein SsuB [Bacillus
anthracis]
Length=251
Score = 238 bits (606), Expect = 8e-82
Identities = 113/240 (47%), Positives = 170/240 (71%), Gaps = 3/240 (1%)
Query 24 VAFHHVHKSFVVNQQPVKVIHDFNLEIKEGEFIAIVGSSGCGKSTLLRLLAGLDQDFDGR 83
V+ + V K F V+V+ + N ++++G+F+ ++G SGCGKSTLL+++AGLD DF+G
Sbjct 3 VSINEVSKYFWKQTGTVQVLENINFQLEKGDFVTVIGPSGCGKSTLLKIVAGLDNDFEGE 62
Query 84 ILIDGADVSGIGGDRAVVFQEHRLFPWLTVEQNIELGLLNEVLTARDKDILVQKAIELIG 143
I+IDG ++ + +FQEHRLFPWLTVE+NI L + +DK V++ +E++
Sbjct 63 IIIDGERITKPSKKQGFIFQEHRLFPWLTVEENIAADLSLKDKYVKDK---VKEWVEIVR 119
Query 144 LNGFEKAYPHQLSGGMSQRVAIARSLVVQPRIFLLDEPFGALDALTRHQMQNELLRIQSQ 203
L+GFEK+YP ++SGGMSQRVAIAR+L+ P + LLDEPFGALDA TR +Q LL I Q
Sbjct 120 LDGFEKSYPKEISGGMSQRVAIARALLRDPSVLLLDEPFGALDAFTRSHLQEVLLNIWEQ 179
Query 204 QKMTTVFITHDVEEAVTLADRVVILKPKPGRVEQIIPVNLPRPRNRSSFELHQLKEQIFR 263
+K T +F+THD++EA+ L++R+VI+ KPG + ++I NL PRN++S QL+ ++ +
Sbjct 180 KKTTMIFVTHDIDEAIYLSNRIVIMSAKPGEIHKVIENNLSYPRNKTSQSFQQLRTKVLQ 239
>Q63A38 Aliphatic sulfonates import ATP-binding protein SsuB [Bacillus
cereus (strain ZK / E33L)]
Length=251
Score = 237 bits (605), Expect = 1e-81
Identities = 110/240 (46%), Positives = 172/240 (72%), Gaps = 3/240 (1%)
Query 24 VAFHHVHKSFVVNQQPVKVIHDFNLEIKEGEFIAIVGSSGCGKSTLLRLLAGLDQDFDGR 83
V+ + V K F V+V+ + N ++++G+F+ ++G SGCGKSTLL+++AGLD DF+G
Sbjct 3 VSINEVSKYFSKQTGTVQVLENINFQLEKGDFVTVIGPSGCGKSTLLKIIAGLDNDFEGE 62
Query 84 ILIDGADVSGIGGDRAVVFQEHRLFPWLTVEQNIELGLLNEVLTARDKDILVQKAIELIG 143
I+IDG ++ + +FQEHRLFPWLTVE+NI L + +DK V++ +E++
Sbjct 63 IIIDGERITKPSKKQGFIFQEHRLFPWLTVEENIAADLSLKDKYVKDK---VKEWVEIVR 119
Query 144 LNGFEKAYPHQLSGGMSQRVAIARSLVVQPRIFLLDEPFGALDALTRHQMQNELLRIQSQ 203
L+GFEK+YP ++SGGMSQRVAIAR+L+ P + LLDEPFGALDA TR +Q LL I Q
Sbjct 120 LDGFEKSYPKEISGGMSQRVAIARALLRDPNVLLLDEPFGALDAFTRSHLQEVLLNIWEQ 179
Query 204 QKMTTVFITHDVEEAVTLADRVVILKPKPGRVEQIIPVNLPRPRNRSSFELHQLKEQIFR 263
+K T +F+THD++EA+ L++R+VI+ KPG++ ++I LP PR+++S ++++++ +
Sbjct 180 KKTTMIFVTHDIDEAIYLSNRIVIMSAKPGKIHKVIENKLPYPRSKNSESFQEIRKKVLQ 239
>Q736E0 Aliphatic sulfonates import ATP-binding protein SsuB [Bacillus
cereus (strain ATCC 10987 / NRS 248)]
Length=251
Score = 237 bits (604), Expect = 2e-81
Identities = 110/240 (46%), Positives = 173/240 (72%), Gaps = 3/240 (1%)
Query 24 VAFHHVHKSFVVNQQPVKVIHDFNLEIKEGEFIAIVGSSGCGKSTLLRLLAGLDQDFDGR 83
V+ V K F + V+V+ + N ++++G+F+ ++G SGCGKSTLL+++AGLD +F+G
Sbjct 3 VSIDGVSKYFSKQTRTVQVLENINFQLEKGDFVTVIGPSGCGKSTLLKIIAGLDGEFEGE 62
Query 84 ILIDGADVSGIGGDRAVVFQEHRLFPWLTVEQNIELGLLNEVLTARDKDILVQKAIELIG 143
I+IDG ++ + +FQEHRLFPWLTVE+NI L + +DK V++ +E++
Sbjct 63 IIIDGERITKPSKKQGFIFQEHRLFPWLTVEENIAADLSLKDKYVKDK---VKEWVEIVR 119
Query 144 LNGFEKAYPHQLSGGMSQRVAIARSLVVQPRIFLLDEPFGALDALTRHQMQNELLRIQSQ 203
L+GFEK+YP ++SGGMSQRVAIAR+L+ P + LLDEPFGALDA TR +Q LL I Q
Sbjct 120 LDGFEKSYPKEISGGMSQRVAIARALLRDPNVLLLDEPFGALDAFTRSHLQEVLLNIWEQ 179
Query 204 QKMTTVFITHDVEEAVTLADRVVILKPKPGRVEQIIPVNLPRPRNRSSFELHQLKEQIFR 263
+K T +F+THD++EA+ L++R+VI+ KPG++ ++I NLP PR+++S ++++++ +
Sbjct 180 KKTTMIFVTHDIDEAIYLSNRIVIMSAKPGKIHKVIENNLPYPRSKTSESFQEIRKKVLQ 239
>Q65M64 Aliphatic sulfonates import ATP-binding protein SsuB [Bacillus
licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505
/ CCUG 7422 / NBRC 12200 / NCIMB 9375 / NCTC 10341 / NRRL
NRS-1264 / Gibson 46)]
Length=255
Score = 234 bits (598), Expect = 1e-80
Identities = 115/233 (49%), Positives = 163/233 (70%), Gaps = 3/233 (1%)
Query 31 KSFVVNQQPVKVIHDFNLEIKEGEFIAIVGSSGCGKSTLLRLLAGLDQDFDGRILIDGAD 90
K+F V+ D NL ++ GEF+ ++G SGCGKSTLL++ AGLD D++GRI ++G +
Sbjct 10 KAFGKGSFKTSVLQDVNLTVENGEFLTVIGPSGCGKSTLLKIAAGLDGDYEGRISMNGRE 69
Query 91 VSGIGGDRAVVFQEHRLFPWLTVEQNIELGLLNEVLTARDKDILVQKAIELIGLNGFEKA 150
+ G G + +FQEHRLFPW+TVEQNI L + R K V + IE + L G EK
Sbjct 70 IKGPGIQQGFIFQEHRLFPWMTVEQNIAADLSLKEPAVRKK---VDELIETVRLKGAEKQ 126
Query 151 YPHQLSGGMSQRVAIARSLVVQPRIFLLDEPFGALDALTRHQMQNELLRIQSQQKMTTVF 210
YP +LSGGMSQRVAIAR+L+ +P I LLDEPFGALDA TR +Q+ L I ++KMT +
Sbjct 127 YPRELSGGMSQRVAIARALLREPEILLLDEPFGALDAFTRKHLQDVLTDIWREKKMTMIL 186
Query 211 ITHDVEEAVTLADRVVILKPKPGRVEQIIPVNLPRPRNRSSFELHQLKEQIFR 263
+THD++E+V LA+R+ IL KPGR+ ++IPV+LP PR+R+S +++++ +
Sbjct 187 VTHDIDESVYLANRIAILTAKPGRIHKLIPVDLPFPRSRTSPVFQTIRQKVLK 239
>P97027 Aliphatic sulfonates import ATP-binding protein SsuB [Bacillus
subtilis (strain 168)]
Length=255
Score = 224 bits (572), Expect = 1e-76
Identities = 109/231 (47%), Positives = 162/231 (70%), Gaps = 3/231 (1%)
Query 31 KSFVVNQQPVKVIHDFNLEIKEGEFIAIVGSSGCGKSTLLRLLAGLDQDFDGRILIDGAD 90
K+FV + V+ + L I GEF+ ++G SGCGKSTLL+++AGLD ++DG + I+G
Sbjct 10 KAFVQEGRKNTVLENIELSIAPGEFLTLIGPSGCGKSTLLKIIAGLDSEYDGSVEINGRS 69
Query 91 VSGIGGDRAVVFQEHRLFPWLTVEQNIELGLLNEVLTARDKDILVQKAIELIGLNGFEKA 150
V+ G + +FQEHRLFPWLTVEQNI L + + K V + IE++ L G EKA
Sbjct 70 VTAPGIQQGFIFQEHRLFPWLTVEQNIAADLNLKDPKVKQK---VDELIEIVRLKGSEKA 126
Query 151 YPHQLSGGMSQRVAIARSLVVQPRIFLLDEPFGALDALTRHQMQNELLRIQSQQKMTTVF 210
YP +LSGGMSQRVAIAR+L+ +P + LLDEPFGALDA TR +Q+ LL I ++K T +
Sbjct 127 YPRELSGGMSQRVAIARALLREPEVLLLDEPFGALDAFTRKHLQDVLLDIWRKKKTTMIL 186
Query 211 ITHDVEEAVTLADRVVILKPKPGRVEQIIPVNLPRPRNRSSFELHQLKEQI 261
+THD++E+V L + + ILK KPG++ +++P++L PRNR++ + +++++
Sbjct 187 VTHDIDESVYLGNELAILKAKPGKIHKLMPIHLAYPRNRTTPDFQAIRQRV 237
>Q2YJB5 Putative ATP-binding protein BAB2_1147 [Brucella abortus
(strain 2308)]
Length=260
Score = 209 bits (533), Expect = 1e-70
Identities = 104/204 (51%), Positives = 141/204 (69%), Gaps = 0/204 (0%)
Query 47 NLEIKEGEFIAIVGSSGCGKSTLLRLLAGLDQDFDGRILIDGADVSGIGGDRAVVFQEHR 106
NL+I +GEF+ +VG SGCGKST + + AGL Q G IL+ V+G G +R V+FQ++
Sbjct 24 NLDIADGEFVTVVGPSGCGKSTAMNIAAGLLQPSGGEILVGDKPVTGPGPERGVIFQQYA 83
Query 107 LFPWLTVEQNIELGLLNEVLTARDKDILVQKAIELIGLNGFEKAYPHQLSGGMSQRVAIA 166
LFPWLTV QN+E GL ++ + + + L+GL F A P LSGGM QR AIA
Sbjct 84 LFPWLTVRQNVEFGLSVAGMSRVKRREISDHYLSLVGLTDFADALPKALSGGMKQRCAIA 143
Query 167 RSLVVQPRIFLLDEPFGALDALTRHQMQNELLRIQSQQKMTTVFITHDVEEAVTLADRVV 226
R+ P I L+DEPFGALDALTR MQ++LL S+++ T +FITHDV+EAV LA+RV+
Sbjct 144 RAYAAAPEILLMDEPFGALDALTRVHMQDQLLDAWSRERRTVMFITHDVDEAVYLANRVI 203
Query 227 ILKPKPGRVEQIIPVNLPRPRNRS 250
++ +PGR++QIIPV+LP PR +
Sbjct 204 VMAARPGRLDQIIPVDLPYPRTEA 227
>Q8FUN3 Putative ATP-binding protein BRA1187/BS1330_II1178 [Brucella
suis biovar 1 (strain 1330)]
Length=260
Score = 209 bits (533), Expect = 1e-70
Identities = 104/204 (51%), Positives = 141/204 (69%), Gaps = 0/204 (0%)
Query 47 NLEIKEGEFIAIVGSSGCGKSTLLRLLAGLDQDFDGRILIDGADVSGIGGDRAVVFQEHR 106
NL+I +GEF+ +VG SGCGKST + + AGL Q G IL+ V+G G +R V+FQ++
Sbjct 24 NLDIADGEFVTVVGPSGCGKSTAMNIAAGLLQPSGGEILVGDKPVTGPGPERGVIFQQYA 83
Query 107 LFPWLTVEQNIELGLLNEVLTARDKDILVQKAIELIGLNGFEKAYPHQLSGGMSQRVAIA 166
LFPWLTV QN+E GL ++ + + + L+GL F A P LSGGM QR AIA
Sbjct 84 LFPWLTVRQNVEFGLSVAGMSRVKRREISDHYLSLVGLTDFADALPKALSGGMKQRCAIA 143
Query 167 RSLVVQPRIFLLDEPFGALDALTRHQMQNELLRIQSQQKMTTVFITHDVEEAVTLADRVV 226
R+ P I L+DEPFGALDALTR MQ++LL S+++ T +FITHDV+EAV LA+RV+
Sbjct 144 RAYAAAPEILLMDEPFGALDALTRVHMQDQLLDAWSRERRTVMFITHDVDEAVYLANRVI 203
Query 227 ILKPKPGRVEQIIPVNLPRPRNRS 250
++ +PGR++QIIPV+LP PR +
Sbjct 204 VMAARPGRLDQIIPVDLPYPRTEA 227
>Q55107 Bicarbonate transport ATP-binding protein CmpC [Synechococcus
elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)]
Length=663
Score = 211 bits (537), Expect = 4e-67
Identities = 116/255 (45%), Positives = 166/255 (65%), Gaps = 10/255 (4%)
Query 24 VAFHHVHKSFVVNQ-QPVKVIHDFNLEIKEGEFIAIVGSSGCGKSTLLRLLAGLDQDFDG 82
VA ++ KSF ++ + +LEIK+GEFI+++G SGCGKSTLL L+AGL+ DG
Sbjct 5 VAVENIEKSFPLSGGNEYLALKGIDLEIKQGEFISLIGHSGCGKSTLLNLIAGLELPTDG 64
Query 83 RILIDGADVSGIGGDRAVVFQEHRLFPWLTVEQNIELGLLNEVLT---ARDKDILVQKAI 139
+ ++G ++ G DR VVFQ + LFPWLTV +NI L + +EVL ++ +V++ I
Sbjct 65 AVSLEGQQITAPGPDRMVVFQNYSLFPWLTVRENIALAV-DEVLRDLPKEERQAIVEEHI 123
Query 140 ELIGLNGFEKAYPHQLSGGMSQRVAIARSLVVQPRIFLLDEPFGALDALTRHQMQNELLR 199
+L+GL P QLSGGM QRVAIAR L +P++ LLDEPFGALDALTR +Q +L++
Sbjct 124 QLVGLGHAADKPPAQLSGGMKQRVAIARGLATRPKLLLLDEPFGALDALTRGNLQEKLMQ 183
Query 200 IQSQQKMTTVFITHDVEEAVTLADRVVILKPKPG-RVEQIIPVNLPRPRNRSSFELH--- 255
I + +T V +THDV+EAV L+DR+V+L PG ++ I+ V++PRPR R H
Sbjct 184 ICEENHVTAVMVTHDVDEAVLLSDRIVMLTNGPGSKIGGILEVDIPRPRKRMDVVHHPSY 243
Query 256 -QLKEQIFRILTEDK 269
L+ +I L + K
Sbjct 244 YSLRSEIIYFLNQQK 258
>P38045 Nitrate import ATP-binding protein NrtC [Synechococcus
elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)]
Length=659
Score = 209 bits (531), Expect = 3e-66
Identities = 113/255 (44%), Positives = 164/255 (64%), Gaps = 10/255 (4%)
Query 24 VAFHHVHKSF-VVNQQPVKVIHDFNLEIKEGEFIAIVGSSGCGKSTLLRLLAGLDQDFDG 82
+A HVH+ F + + D +L I+ GEFI+++G SGCGKSTLL L+AGL Q G
Sbjct 5 LAVDHVHQVFDLPGGGQYIALKDVSLNIRPGEFISLIGHSGCGKSTLLNLIAGLAQPSSG 64
Query 83 RILIDGADVSGIGGDRAVVFQEHRLFPWLTVEQNIELGLLNEVLTARDKD---ILVQKAI 139
I+++G V+ G DR VVFQ + L PW TV QNI L + + VL R++ ++++ I
Sbjct 65 GIILEGRQVTEPGPDRMVVFQNYSLLPWRTVRQNIALAV-DSVLHDRNRTERRTIIEETI 123
Query 140 ELIGLNGFEKAYPHQLSGGMSQRVAIARSLVVQPRIFLLDEPFGALDALTRHQMQNELLR 199
+L+GL YPH++SGGM QRVAIAR L ++P++ LLDEPFGALDALTR +Q +L+R
Sbjct 124 DLVGLRAAADKYPHEISGGMKQRVAIARGLAIRPKLLLLDEPFGALDALTRGNLQEQLMR 183
Query 200 IQSQQKMTTVFITHDVEEAVTLADRVVILKPKP-GRVEQIIPVNLPRPRNRSSF----EL 254
I + +T V +THDV+EA+ L+DRVV+L P ++ QI+ V+ PRPR R
Sbjct 184 ICQEAGVTAVMVTHDVDEALLLSDRVVMLTNGPAAQIGQILEVDFPRPRQRLEMMETPHY 243
Query 255 HQLKEQIFRILTEDK 269
+ L+ ++ L + +
Sbjct 244 YDLRNELINFLQQQR 258
>Q55462 Bicarbonate transport ATP-binding protein CmpC [Synechocystis
sp. (strain PCC 6803 / Kazusa)]
Length=667
Score = 207 bits (527), Expect = 1e-65
Identities = 109/231 (47%), Positives = 158/231 (68%), Gaps = 9/231 (4%)
Query 47 NLEIKEGEFIAIVGSSGCGKSTLLRLLAGLDQDFDGRILIDGADVSGIGGDRAVVFQEHR 106
NLEIK+GEF++++G SGCGKSTLL ++AGLD +G + ++G + G D+ V+FQ +
Sbjct 29 NLEIKKGEFVSLIGHSGCGKSTLLNMIAGLDLPSEGIVTLEGQRIKQPGPDKMVIFQNYS 88
Query 107 LFPWLTVEQNIELGLLNEVL---TARDKDILVQKAIELIGLNGFEKAYPHQLSGGMSQRV 163
L PWLTV+QNI L + +EV+ +A ++ +V++ I L+GL P +LSGGM QRV
Sbjct 89 LLPWLTVKQNIALAV-DEVMKGASAAERKAIVEEHINLVGLGHAVDKRPGELSGGMKQRV 147
Query 164 AIARSLVVQPRIFLLDEPFGALDALTRHQMQNELLRIQSQQKMTTVFITHDVEEAVTLAD 223
AIAR+L ++P++ LLDEPFGALDALTR +Q +L+RI Q ++T V +THDV+EAV L+D
Sbjct 148 AIARALAIRPKLLLLDEPFGALDALTRGNLQEQLMRICEQYQVTAVMVTHDVDEAVLLSD 207
Query 224 RVVILKPKPG-RVEQIIPVNLPRPRNRSSFELH----QLKEQIFRILTEDK 269
R+V+L PG + I+ V++PRPR R H L+ +I L + K
Sbjct 208 RIVMLTNGPGSNIGGILEVDIPRPRKRMEVVEHPSYYSLRSEIIYFLNQQK 258
>P38046 Nitrate import ATP-binding protein NrtD [Synechococcus
elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)]
Length=274
Score = 191 bits (485), Expect = 3e-63
Identities = 98/229 (43%), Positives = 143/229 (62%), Gaps = 3/229 (1%)
Query 26 FHHVHKSFVVNQQPVKVIHDFNLEIKEGEFIAIVGSSGCGKSTLLRLLAGLDQDFDGRIL 85
F V K+F + P I D NL +++GEFI ++G SGCGKSTLL L++G Q G +
Sbjct 19 FDCVGKTFPTPRGPYVAIEDVNLSVQQGEFICVIGHSGCGKSTLLNLVSGFSQPTSGGVY 78
Query 86 IDGADVSGIGGDRAVVFQEHRLFPWLTVEQNIELGL--LNEVLTARDKDILVQKAIELIG 143
+DG + G DR VVFQ + L PW + NI L + L+ ++ +V +EL+G
Sbjct 79 LDGQPIQEPGPDRMVVFQNYSLLPWKSARDNIALAVKAARPHLSTSEQRQVVDHHLELVG 138
Query 144 LNGFEKAYPHQLSGGMSQRVAIARSLVVQPRIFLLDEPFGALDALTRHQMQNELLRIQSQ 203
L + P QLSGGM QRVAIAR+L ++P + +LDEPFGALDA+T+ ++Q ELL I +
Sbjct 139 LTEAQHKRPDQLSGGMKQRVAIARALSIRPEVLILDEPFGALDAITKEELQEELLNIWEE 198
Query 204 QKMTTVFITHDVEEAVTLADRVVILKPKP-GRVEQIIPVNLPRPRNRSS 251
+ T + ITHD++EA+ LADRVV++ P + +++ + RPR R +
Sbjct 199 ARPTVLMITHDIDEALFLADRVVMMTNGPAATIGEVLEIPFDRPREREA 247
>P39459 Nitrate transport protein NasD [Klebsiella oxytoca]
Length=262
Score = 187 bits (476), Expect = 4e-62
Identities = 100/233 (43%), Positives = 147/233 (63%), Gaps = 8/233 (3%)
Query 43 IHDFNLEIKEGEFIAIVGSSGCGKSTLLRLLAGLDQDFDGRILIDGADVSGIGGDRAVVF 102
+ + + +I EGE I+++G SGCGKSTLL L+AG+ +G +L D +++G G +RAVVF
Sbjct 24 LQNVSFDIYEGETISLIGHSGCGKSTLLNLIAGIALPTEGGLLCDNREIAGPGPERAVVF 83
Query 103 QEHRLFPWLTVEQNIELGL---LNEVLTARDKDILVQKAIELIGLNGFEKAYPHQLSGGM 159
Q H L PWLT N+ L + ++ ++ ++ +E + + P ++SGGM
Sbjct 84 QNHSLLPWLTCFDNVALAVDQVFRRSMSKGERKEWIEHNLERVQMGHALHKRPGEISGGM 143
Query 160 SQRVAIARSLVVQPRIFLLDEPFGALDALTRHQMQNELLRIQSQQKMTTVFITHDVEEAV 219
QRV IAR+L ++P++ LLDEPFGALDALTR +Q+ +++IQ T V ITHDV+EAV
Sbjct 144 KQRVGIARALAMKPKVLLLDEPFGALDALTRAHLQDAVMQIQQSLNTTIVMITHDVDEAV 203
Query 220 TLADRVVILKPKP-GRVEQIIPVNLPRPRNR----SSFELHQLKEQIFRILTE 267
L+DRV+++ P V +I+ VNLPRPRNR H L++QI L E
Sbjct 204 LLSDRVLMMTNGPAATVGEILDVNLPRPRNRVQLADDSRYHHLRQQILHFLYE 256
>Q55108 Bicarbonate transport ATP-binding protein CmpD [Synechococcus
elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)]
Length=278
Score = 187 bits (474), Expect = 1e-61
Identities = 92/225 (41%), Positives = 148/225 (66%), Gaps = 3/225 (1%)
Query 28 HVHKSFVVNQQPVKVIHDFNLEIKEGEFIAIVGSSGCGKSTLLRLLAGLDQDFDGRILID 87
+V K + + P V+ NL ++EGEFI ++G SGCGKSTLL +++G +Q G + +
Sbjct 25 NVSKIYETPKGPYTVLDGVNLTVQEGEFICVIGHSGCGKSTLLNMVSGFNQPSHGSVRLK 84
Query 88 GADVSGIGGDRAVVFQEHRLFPWLTVEQNIELGL--LNEVLTARDKDILVQKAIELIGLN 145
G ++ G DR VVFQ + L PW+T +N+ L + +N + +K +V++ + ++GL
Sbjct 85 GKEIDRPGPDRMVVFQNYALLPWMTAYENVYLAVDCVNPQMREGEKREIVREHLAMVGLT 144
Query 146 GFEKAYPHQLSGGMSQRVAIARSLVVQPRIFLLDEPFGALDALTRHQMQNELLRIQSQQK 205
+ Q+SGGM QRVAIAR+L ++P + +LDEPFGALDA+T+ ++Q ELL+I + +
Sbjct 145 EAAEKKITQISGGMKQRVAIARALSIRPEVLILDEPFGALDAITKEELQEELLKIWNDHR 204
Query 206 MTTVFITHDVEEAVTLADRVVILKPKP-GRVEQIIPVNLPRPRNR 249
T + ITHD++EA+ LADR+V++ P + +I+ + PRPR+R
Sbjct 205 CTVLMITHDIDEALFLADRLVMMTNGPAANIGEIMTIPFPRPRDR 249
>Q55463 Bicarbonate transport ATP-binding protein CmpD [Synechocystis
sp. (strain PCC 6803 / Kazusa)]
Length=282
Score = 183 bits (465), Expect = 3e-60
Identities = 90/229 (39%), Positives = 145/229 (63%), Gaps = 3/229 (1%)
Query 24 VAFHHVHKSFVVNQQPVKVIHDFNLEIKEGEFIAIVGSSGCGKSTLLRLLAGLDQDFDGR 83
+ +V K + + P V+ + NL + EGEFI ++G SGCGKSTLL +++G DG
Sbjct 24 LTIENVSKVYPTAKGPYTVLENVNLTVNEGEFICVIGHSGCGKSTLLNMVSGFASPTDGS 83
Query 84 ILIDGADVSGIGGDRAVVFQEHRLFPWLTVEQNIELGL--LNEVLTARDKDILVQKAIEL 141
+ + G ++ G DR VVFQ + L PWLT +N+ + + ++ T +K + + + +
Sbjct 84 VQVGGKIITEPGPDRMVVFQNYALLPWLTALENVYIAVDAVHSQKTEAEKRAIAKDHLAM 143
Query 142 IGLNGFEKAYPHQLSGGMSQRVAIARSLVVQPRIFLLDEPFGALDALTRHQMQNELLRIQ 201
+GL P Q+SGGM QRV+IAR+L ++P + +LDEPFGALDA+T+ ++Q ELL+I
Sbjct 144 VGLTDSMDKKPGQISGGMKQRVSIARALAIRPEVLILDEPFGALDAITKEELQEELLQIW 203
Query 202 SQQKMTTVFITHDVEEAVTLADRVVILKPKP-GRVEQIIPVNLPRPRNR 249
+ + T + ITHD++EA+ LADR+V++ P + +I+ + RPR+R
Sbjct 204 NDHRCTVLMITHDIDEALFLADRLVMMTNGPHANIGEIMTIPFSRPRDR 252
>Q8KZQ6 Aliphatic sulfonates import ATP-binding protein SsuB [Pseudomonas
putida]
Length=270
Score = 175 bits (444), Expect = 3e-57
Identities = 102/227 (45%), Positives = 140/227 (62%), Gaps = 9/227 (4%)
Query 41 KVIHDFNLEIKEGEFIAIVGSSGCGKSTLLRLLAGLDQDFDGRILIDGADVSGIGGDRAV 100
+V+ L I G+F+AIVG SGCGKSTLLRLLAGLDQ G++L A + + +
Sbjct 30 EVLKGIELHIPAGQFVAIVGRSGCGKSTLLRLLAGLDQPTAGQLLAGAAPLEQAREETRL 89
Query 101 VFQEHRLFPWLTVEQNIELGLLNEVLTARDKDILVQKAIELIGLNGFEKAYPHQLSGGMS 160
+FQ+ RL PW V N+ LGL + D +A+E +GL +P LSGG
Sbjct 90 MFQDARLLPWKKVIDNVGLGL------SGDWRPRALEALESVGLADRANEWPAALSGGQK 143
Query 161 QRVAIARSLVVQPRIFLLDEPFGALDALTRHQMQNELLRIQSQQKMTTVFITHDVEEAVT 220
QRVA+AR+L+ QPR+ LLDEP GALDALTR +MQ + R+ Q T + +THDV EAV
Sbjct 144 QRVALARALIHQPRLLLLDEPLGALDALTRIEMQQLIERLWRQHGFTVLLVTHDVSEAVA 203
Query 221 LADRVVILKPKPGRVEQIIPVNLPRPRNRSSFELHQLKEQIF-RILT 266
+ADRV+++ + G V + V+L RPR R S L L+ ++ R+L+
Sbjct 204 VADRVILI--EDGEVGLDLTVDLARPRARGSHRLAALESEVLNRVLS 248
>Q47538 Taurine import ATP-binding protein TauB [Escherichia coli
(strain K12)]
Length=255
Score = 174 bits (441), Expect = 6e-57
Identities = 89/203 (44%), Positives = 123/203 (61%), Gaps = 0/203 (0%)
Query 43 IHDFNLEIKEGEFIAIVGSSGCGKSTLLRLLAGLDQDFDGRILIDGADVSGIGGDRAVVF 102
+ D NL ++ GE + ++G SGCGK+TLL L+AG G I + G + G G +R VVF
Sbjct 17 LEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSIQLAGKRIEGPGAERGVVF 76
Query 103 QEHRLFPWLTVEQNIELGLLNEVLTARDKDILVQKAIELIGLNGFEKAYPHQLSGGMSQR 162
Q L PW V+ N+ GL + + + + ++ +GL G EK Y QLSGG QR
Sbjct 77 QNEGLLPWRNVQDNVAFGLQLAGIEKMQRLEIAHQMLKKVGLEGAEKRYIWQLSGGQRQR 136
Query 163 VAIARSLVVQPRIFLLDEPFGALDALTRHQMQNELLRIQSQQKMTTVFITHDVEEAVTLA 222
V IAR+L P++ LLDEPFGALDA TR QMQ LL++ + + ITHD+EEAV +A
Sbjct 137 VGIARALAANPQLLLLDEPFGALDAFTRDQMQTLLLKLWQETGKQVLLITHDIEEAVFMA 196
Query 223 DRVVILKPKPGRVEQIIPVNLPR 245
+V+L PGRV + +P+N R
Sbjct 197 TELVLLSSGPGRVLERLPLNFAR 219
Lambda K H a alpha
0.324 0.140 0.401 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1231425
Database: 72421956c6d97191605b295b36f4981f.SwissProt.fasta
Posted date: May 20, 2024 11:14 PM
Number of letters in database: 6,413
Number of sequences in database: 20
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
