BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: e9a695e6eef211838ac60b38a5bac5aa.SwissProt.fasta
17 sequences; 8,821 total letters
Query= ACIAD1633
Length=443
Score E
Sequences producing significant alignments: (Bits) Value
Q8X524 Sensor protein QseC [Escherichia coli O157:H7] 96.7 9e-25
P40719 Sensor protein QseC [Escherichia coli (strain K12)] 95.5 2e-24
Q8ZLZ9 Sensor protein QseC [Salmonella typhimurium (strain LT2 / ... 91.7 4e-23
Q8Z3P2 Sensor protein QseC [Salmonella typhi] 91.7 4e-23
P45336 Sensor protein QseC [Haemophilus influenzae (strain ATCC 5... 76.6 3e-18
P0AE83 Sensor protein CpxA [Escherichia coli O6:H1 (strain CFT073... 72.0 1e-16
P0AE84 Sensor protein CpxA [Escherichia coli O157:H7] 72.0 1e-16
P0AE82 Sensor histidine kinase CpxA [Escherichia coli (strain K12)] 72.0 1e-16
P76339 Sensor histidine kinase HprS [Escherichia coli (strain K12)] 68.2 2e-15
A0QTK3 Sensor histidine kinase MtrB [Mycolicibacterium smegmatis ... 63.5 7e-14
Q70FG9 Sensor histidine kinase PmrB [Pectobacterium parmentieri] 62.8 8e-14
O31661 Sporulation kinase E [Bacillus subtilis (strain 168)] 63.5 8e-14
Q93CB7 Sensor histidine kinase MtrB [Mycolicibacterium paratuberc... 63.2 9e-14
Q56128 Sensor histidine kinase RcsC [Salmonella typhi] 62.4 2e-13
Q8CU87 Sensor protein kinase WalK [Staphylococcus epidermidis (st... 62.0 2e-13
Q5HK19 Sensor protein kinase WalK [Staphylococcus epidermidis (st... 62.0 2e-13
P30844 Sensor protein BasS [Escherichia coli (strain K12)] 61.2 2e-13
>Q8X524 Sensor protein QseC [Escherichia coli O157:H7]
Length=449
Score = 96.7 bits (239), Expect = 9e-25
Identities = 85/322 (26%), Positives = 147/322 (46%), Gaps = 30/322 (9%)
Query 107 DGKERMTVYGE---KSGQHVLLVFGESNVNKLVWLFGLAPLMFSLFVLYSFLWWSNRRAK 163
DGK R+ V E + + +V G+ + WL L ++ + VL
Sbjct 138 DGKYRIVVGQEWEYREDMALAIVAGQL----IPWLVALPVMLIIMMVLLG---------- 183
Query 164 RYFSPITRLANTLEQIDWTHQDKQDSLFSDISTNGNMEAEYLKAALEKYHQVLSQFIRRE 223
R +P+ +LA L D DS +T E L +L + + RE
Sbjct 184 RELAPLNKLALALRMRD------PDSEKPLNATGVPSEVRPLVESLNQLFARTHAMMVRE 237
Query 224 REFTGDVSHELRTPLTILKGNVQLCQTR----YGHDKALTRIHNTIEDMQLLVDTLLAIA 279
R FT D +HELR+PLT LK ++ Q KAL ++H+ I+ LVD LL ++
Sbjct 238 RRFTSDAAHELRSPLTALKVQTEVAQLSDDDPQARKKALLQLHSGIDRATRLVDQLLTLS 297
Query 280 R-NTVENL-NAEQYLLSKIIHDLIIDLEPISQAKGIDTQIQHDVEEQPRWLYPSMTQMVF 337
R ++++NL + + L ++ ++D+ +Q ID ++ +V+ R P + ++
Sbjct 298 RLDSLDNLQDVAEIPLEDLLQSSVMDIYHTAQQAKIDVRLTLNVQGIKRTGQPLLLSLLV 357
Query 338 GNILRNALNYS-QGKSIDIVLQKNSILIADDGIGLNLPEDVKVKALNESQLDVNVKGHGI 396
N+L NA+ YS QG +D+ L ++ ++ D+G G+ ++ G G+
Sbjct 358 RNLLDNAVRYSPQGSVVDVTLNADNFIVRDNGPGVTPEALARIGERFYRPPGQTATGSGL 417
Query 397 GLQLVQKLCKQLNWRVELFDRE 418
GL +VQ++ K VE + E
Sbjct 418 GLSIVQRIAKLHGMNVEFGNAE 439
>P40719 Sensor protein QseC [Escherichia coli (strain K12)]
Length=449
Score = 95.5 bits (236), Expect = 2e-24
Identities = 88/341 (26%), Positives = 152/341 (45%), Gaps = 32/341 (9%)
Query 85 GAQTPLRFQDMHLKTGVHRIFIDGKERMTVYGEKSGQHVLLVFGESNVNKLVWLFGLAPL 144
G P RF M G +RI + G+E + + + +V G+ + WL L +
Sbjct 124 GEDDPWRFVWMTSPDGKYRIVV-GQE----WEYREDMALAIVAGQL----IPWLVALPIM 174
Query 145 MFSLFVLYSFLWWSNRRAKRYFSPITRLANTLEQIDWTHQDKQDSLFSDISTNGNMEAEY 204
+ + VL R +P+ +LA L D DS +T E
Sbjct 175 LIIMMVLLG----------RELAPLNKLALALRMRD------PDSEKPLNATGVPSEVRP 218
Query 205 LKAALEKYHQVLSQFIRREREFTGDVSHELRTPLTILKGNVQLCQTR----YGHDKALTR 260
L +L + + RER FT D +HELR+PLT LK ++ Q KAL +
Sbjct 219 LVESLNQLFARTHAMMVRERRFTSDAAHELRSPLTALKVQTEVAQLSDDDPQARKKALLQ 278
Query 261 IHNTIEDMQLLVDTLLAIAR-NTVENL-NAEQYLLSKIIHDLIIDLEPISQAKGIDTQIQ 318
+H+ I+ LVD LL ++R ++++NL + + L ++ ++D+ +Q ID ++
Sbjct 279 LHSGIDRATRLVDQLLTLSRLDSLDNLQDVAEIPLEDLLQSSVMDIYHTAQQAKIDVRLT 338
Query 319 HDVEEQPRWLYPSMTQMVFGNILRNALNYS-QGKSIDIVLQKNSILIADDGIGLNLPEDV 377
+ R P + ++ N+L NA+ YS QG +D+ L ++ ++ D+G G+
Sbjct 339 LNAHSIKRTGQPLLLSLLVRNLLDNAVRYSPQGSVVDVTLNADNFIVRDNGPGVTPEALA 398
Query 378 KVKALNESQLDVNVKGHGIGLQLVQKLCKQLNWRVELFDRE 418
++ G G+GL +VQ++ K VE + E
Sbjct 399 RIGERFYRPPGQTATGSGLGLSIVQRIAKLHGMNVEFGNAE 439
>Q8ZLZ9 Sensor protein QseC [Salmonella typhimurium (strain LT2
/ SGSC1412 / ATCC 700720)]
Length=449
Score = 91.7 bits (226), Expect = 4e-23
Identities = 62/211 (29%), Positives = 107/211 (51%), Gaps = 7/211 (3%)
Query 201 EAEYLKAALEKYHQVLSQFIRREREFTGDVSHELRTPLTILKGNVQLCQTR----YGHDK 256
E L AL + + + RER FT D +HELR+PL LK ++ Q DK
Sbjct 215 EVRPLVEALNQLFSRIHSMMVRERRFTSDAAHELRSPLAALKVQTEVAQLSGDDPLSRDK 274
Query 257 ALTRIHNTIEDMQLLVDTLLAIAR-NTVENL-NAEQYLLSKIIHDLIIDLEPISQAKGID 314
ALT++H I+ LVD LL ++R +++ NL + + L +++ ++D+ +Q ID
Sbjct 275 ALTQLHAGIDRATRLVDQLLTLSRLDSLNNLQDVAEISLEELLQSAVMDIYHPAQQANID 334
Query 315 TQIQHDVEEQPRWLYPSMTQMVFGNILRNALNYS-QGKSIDIVLQKNSILIADDGIGLNL 373
++Q + + R P + ++ N+L NA+ YS QG +D+ L S + D+G G+
Sbjct 335 VRLQLNAHDVIRTGQPLLLSLLVRNLLDNAIRYSPQGSVVDVTLHARSFTVRDNGPGVAP 394
Query 374 PEDVKVKALNESQLDVNVKGHGIGLQLVQKL 404
+ +V G G+GL +V+++
Sbjct 395 EILTHIGERFYRPPGQSVTGSGLGLSIVRRI 425
Score = 19.2 bits (38), Expect = 5.1
Identities = 9/30 (30%), Positives = 16/30 (53%), Gaps = 0/30 (0%)
Query 171 RLANTLEQIDWTHQDKQDSLFSDISTNGNM 200
R+A+T +++ H D F+ S +G M
Sbjct 68 RMAHTPKKLKHGHIDDDALAFAIFSADGKM 97
>Q8Z3P2 Sensor protein QseC [Salmonella typhi]
Length=449
Score = 91.7 bits (226), Expect = 4e-23
Identities = 62/211 (29%), Positives = 107/211 (51%), Gaps = 7/211 (3%)
Query 201 EAEYLKAALEKYHQVLSQFIRREREFTGDVSHELRTPLTILKGNVQLCQTR----YGHDK 256
E L AL + + + RER FT D +HELR+PL LK ++ Q DK
Sbjct 215 EVRPLVEALNQLFSRIHSMMVRERRFTSDAAHELRSPLAALKVQTEVAQLSGDDPLSRDK 274
Query 257 ALTRIHNTIEDMQLLVDTLLAIAR-NTVENL-NAEQYLLSKIIHDLIIDLEPISQAKGID 314
ALT++H I+ LVD LL ++R +++ NL + + L +++ ++D+ +Q ID
Sbjct 275 ALTQLHAGIDRATRLVDQLLTLSRLDSLNNLQDVAEISLEELLQSAVMDIYHPAQQANID 334
Query 315 TQIQHDVEEQPRWLYPSMTQMVFGNILRNALNYS-QGKSIDIVLQKNSILIADDGIGLNL 373
++Q + + R P + ++ N+L NA+ YS QG +D+ L S + D+G G+
Sbjct 335 VRLQLNAHDVIRTGQPLLLSLLVRNLLDNAIRYSPQGSVVDVTLHARSFTVRDNGPGVAP 394
Query 374 PEDVKVKALNESQLDVNVKGHGIGLQLVQKL 404
+ +V G G+GL +V+++
Sbjct 395 EILTHIGERFYRPPGQSVTGSGLGLSIVRRI 425
Score = 19.2 bits (38), Expect = 5.1
Identities = 9/30 (30%), Positives = 16/30 (53%), Gaps = 0/30 (0%)
Query 171 RLANTLEQIDWTHQDKQDSLFSDISTNGNM 200
R+A+T +++ H D F+ S +G M
Sbjct 68 RMAHTPKKLKHGHIDDDALAFAIFSADGKM 97
>P45336 Sensor protein QseC [Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd)]
Length=451
Score = 76.6 bits (187), Expect = 3e-18
Identities = 71/279 (25%), Positives = 132/279 (47%), Gaps = 24/279 (9%)
Query 147 SLFVLYSFLWWSNRRAKRYFSPITRLANTLEQIDWTHQDKQDSLFSDISTNG-NMEAEYL 205
SL +L L W + R PI RL+ + Q ++ S ++T G +E L
Sbjct 168 SLPILIIVLGWLIHKELR---PIKRLSQEV-------QTRKSGDVSLLNTEGLPVEILPL 217
Query 206 KAALEKYHQVLSQFIRREREFTGDVSHELRTPLTILKGNVQLCQTRYG----HDKALTRI 261
L ++ S ++RER FT D +HELR+PL L+ +++ Q ++AL +
Sbjct 218 VKNLNQFFDRTSAMLQRERRFTSDAAHELRSPLAALRIQIEVAQLAGDDVALREQALLHL 277
Query 262 HNTIEDMQLLVDTLLAIARNTVENLNAEQYL----LSKIIHDLIIDLEPISQAKGIDTQI 317
I+ L++ LL ++R ++NL A + L I+ LI + +++ + I
Sbjct 278 TQGIDRASQLIEQLLTLSR--LDNLQALETLQLLDWEAIVQSLISERYFVAEKRKITLVF 335
Query 318 QHDVEEQPRWLYPSMTQMVFGNILRNALNY-SQGKSIDIVLQKNSILIADDGIGLNLPED 376
+ + E + + + ++ N+L NA+ Y + + + + + I+I D+G G+ PED
Sbjct 336 EKESEPKQKQGQSILVSLMLRNLLDNAIKYCPEDTIVSVKISSSQIIIEDNGGGVE-PED 394
Query 377 VKVKALN-ESQLDVNVKGHGIGLQLVQKLCKQLNWRVEL 414
+K N KG G+GL +V ++ + ++V L
Sbjct 395 LKKLGQRFYRPAGQNEKGSGLGLSIVMRIAELHGFKVRL 433
>P0AE83 Sensor protein CpxA [Escherichia coli O6:H1 (strain CFT073
/ ATCC 700928 / UPEC)]
Length=457
Score = 72.0 bits (175), Expect = 1e-16
Identities = 73/304 (24%), Positives = 130/304 (43%), Gaps = 22/304 (7%)
Query 116 GEKSGQHVLLVFGESNVNKLVWLFGLAPLMFSLFVLYS----FLWWSNRRAKRYFSPITR 171
GE + Q L+ S+ + + L PL+ + + LW + AK P +
Sbjct 137 GEDNYQLYLIRPASSSQSDFINLLFDRPLLLLIVTMLVSTPLLLWLAWSLAK----PARK 192
Query 172 LANTLEQIDWTHQDKQDSLFSDISTNGNMEAEYLKAALEKYHQVLSQFIRREREFTGDVS 231
L N +++ + + L + G E A+ + L + + ++ D+S
Sbjct 193 LKNAADEVAQGNLRQHPELEA-----GPQEFLAAGASFNQMVTALERMMTSQQRLLSDIS 247
Query 232 HELRTPLTILKGNVQLCQTRYGHDKALTRIHNTIEDMQLLVDTLLAIARNTVENLNAEQY 291
HELRTPLT L+ L + R G K L RI + + +++ LL ++RN +N +
Sbjct 248 HELRTPLTRLQLGTALLRRRSGESKELERIETEAQRLDSMINDLLVMSRNQQKNALVSET 307
Query 292 LLSKIIHDLIIDLEPI-SQAKGIDTQIQHDVEEQPRWLYPSMTQMVFGNILRNALNYSQG 350
+ + + ++D ++ G + P + P+ + NI+RNAL YS
Sbjct 308 IKANQLWSEVLDNAAFEAEQMGKSLTVNFPPGPWPLYGNPNALESALENIVRNALRYSHT 367
Query 351 K-SIDIVLQKNSILIA--DDGIGLNLPED----VKVKALNESQLDVNVKGHGIGLQLVQK 403
K + + K+ I I DDG G++ PED + + D G G+GL +V+
Sbjct 368 KIEVGFAVDKDGITITVDDDGPGVS-PEDREQIFRPFYRTDEARDRESGGTGLGLAIVET 426
Query 404 LCKQ 407
+Q
Sbjct 427 AIQQ 430
>P0AE84 Sensor protein CpxA [Escherichia coli O157:H7]
Length=457
Score = 72.0 bits (175), Expect = 1e-16
Identities = 73/304 (24%), Positives = 130/304 (43%), Gaps = 22/304 (7%)
Query 116 GEKSGQHVLLVFGESNVNKLVWLFGLAPLMFSLFVLYS----FLWWSNRRAKRYFSPITR 171
GE + Q L+ S+ + + L PL+ + + LW + AK P +
Sbjct 137 GEDNYQLYLIRPASSSQSDFINLLFDRPLLLLIVTMLVSTPLLLWLAWSLAK----PARK 192
Query 172 LANTLEQIDWTHQDKQDSLFSDISTNGNMEAEYLKAALEKYHQVLSQFIRREREFTGDVS 231
L N +++ + + L + G E A+ + L + + ++ D+S
Sbjct 193 LKNAADEVAQGNLRQHPELEA-----GPQEFLAAGASFNQMVTALERMMTSQQRLLSDIS 247
Query 232 HELRTPLTILKGNVQLCQTRYGHDKALTRIHNTIEDMQLLVDTLLAIARNTVENLNAEQY 291
HELRTPLT L+ L + R G K L RI + + +++ LL ++RN +N +
Sbjct 248 HELRTPLTRLQLGTALLRRRSGESKELERIETEAQRLDSMINDLLVMSRNQQKNALVSET 307
Query 292 LLSKIIHDLIIDLEPI-SQAKGIDTQIQHDVEEQPRWLYPSMTQMVFGNILRNALNYSQG 350
+ + + ++D ++ G + P + P+ + NI+RNAL YS
Sbjct 308 IKANQLWSEVLDNAAFEAEQMGKSLTVNFPPGPWPLYGNPNALESALENIVRNALRYSHT 367
Query 351 K-SIDIVLQKNSILIA--DDGIGLNLPED----VKVKALNESQLDVNVKGHGIGLQLVQK 403
K + + K+ I I DDG G++ PED + + D G G+GL +V+
Sbjct 368 KIEVGFAVDKDGITITVDDDGPGVS-PEDREQIFRPFYRTDEARDRESGGTGLGLAIVET 426
Query 404 LCKQ 407
+Q
Sbjct 427 AIQQ 430
>P0AE82 Sensor histidine kinase CpxA [Escherichia coli (strain
K12)]
Length=457
Score = 72.0 bits (175), Expect = 1e-16
Identities = 73/304 (24%), Positives = 130/304 (43%), Gaps = 22/304 (7%)
Query 116 GEKSGQHVLLVFGESNVNKLVWLFGLAPLMFSLFVLYS----FLWWSNRRAKRYFSPITR 171
GE + Q L+ S+ + + L PL+ + + LW + AK P +
Sbjct 137 GEDNYQLYLIRPASSSQSDFINLLFDRPLLLLIVTMLVSTPLLLWLAWSLAK----PARK 192
Query 172 LANTLEQIDWTHQDKQDSLFSDISTNGNMEAEYLKAALEKYHQVLSQFIRREREFTGDVS 231
L N +++ + + L + G E A+ + L + + ++ D+S
Sbjct 193 LKNAADEVAQGNLRQHPELEA-----GPQEFLAAGASFNQMVTALERMMTSQQRLLSDIS 247
Query 232 HELRTPLTILKGNVQLCQTRYGHDKALTRIHNTIEDMQLLVDTLLAIARNTVENLNAEQY 291
HELRTPLT L+ L + R G K L RI + + +++ LL ++RN +N +
Sbjct 248 HELRTPLTRLQLGTALLRRRSGESKELERIETEAQRLDSMINDLLVMSRNQQKNALVSET 307
Query 292 LLSKIIHDLIIDLEPI-SQAKGIDTQIQHDVEEQPRWLYPSMTQMVFGNILRNALNYSQG 350
+ + + ++D ++ G + P + P+ + NI+RNAL YS
Sbjct 308 IKANQLWSEVLDNAAFEAEQMGKSLTVNFPPGPWPLYGNPNALESALENIVRNALRYSHT 367
Query 351 K-SIDIVLQKNSILIA--DDGIGLNLPED----VKVKALNESQLDVNVKGHGIGLQLVQK 403
K + + K+ I I DDG G++ PED + + D G G+GL +V+
Sbjct 368 KIEVGFAVDKDGITITVDDDGPGVS-PEDREQIFRPFYRTDEARDRESGGTGLGLAIVET 426
Query 404 LCKQ 407
+Q
Sbjct 427 AIQQ 430
>P76339 Sensor histidine kinase HprS [Escherichia coli (strain
K12)]
Length=452
Score = 68.2 bits (165), Expect = 2e-15
Identities = 65/218 (30%), Positives = 104/218 (48%), Gaps = 16/218 (7%)
Query 201 EAEYLKAALEKYHQVLSQFIRREREFTGDVSHELRTPLTILKG--NVQLCQTR--YGHDK 256
E + L AL K H L + R +F D++HELRTP+ L G V L QTR + K
Sbjct 214 ELKPLGQALNKMHHALVKDFERLSQFADDLAHELRTPINALLGQNQVTLSQTRSIAEYQK 273
Query 257 ALTRIHNTIEDMQLLVDTLLAIARNTVEN--LNAEQYLLSKIIHDLIIDLEPISQAKGID 314
+ +E++ L + +L +AR N + + L+K + +L+ LE +S K I
Sbjct 274 TIAGNIEELENISRLTENILFLARADKNNVLVKLDSLSLNKEVENLLDYLEYLSDEKEIC 333
Query 315 TQIQHDVEEQPRWLYPSMTQMVFGNILRNALNYSQGKS---IDIVLQKNSIL---IADDG 368
+++ + Q + + Q + N++ NA+ YS KS I L NS L IA G
Sbjct 334 FKVECN---QQIFADKILLQRMLSNLIVNAIRYSPEKSRIHITSFLDTNSYLNIDIASPG 390
Query 369 IGLNLPEDVKVKALNESQLDVNVKGHGIGLQLVQKLCK 406
+N PE + + +V G G+GL LV+ + +
Sbjct 391 TKINEPEKLFRRFWRGDNSRHSV-GQGLGLSLVKAIAE 427
>A0QTK3 Sensor histidine kinase MtrB [Mycolicibacterium smegmatis
(strain ATCC 700084 / mc(2)155)]
Length=553
Score = 63.5 bits (153), Expect = 7e-14
Identities = 48/183 (26%), Positives = 90/183 (49%), Gaps = 17/183 (9%)
Query 208 ALEKYHQVLSQFIRREREFTGDVSHELRTPLTILKGNVQLCQTRYGH----DKALTR--- 260
+L + Q L +F +R FT DVSHELRTPLT ++ L Y H D AL R
Sbjct 280 SLSRQIQQLEEFGNLQRRFTSDVSHELRTPLTTVRMAADLI---YDHSEDLDPALRRSTE 336
Query 261 -IHNTIEDMQLLVDTLLAIARNT--VENLNAEQYLLSKIIHDLIIDLEPISQAKGIDTQI 317
+ N ++ + L+ LL I+R+ V L+ E L + + ++ ++ G++ +
Sbjct 337 LMVNELDRFETLLADLLEISRHDAGVAELSVESLDLRSTVRSALDNVGHLAADAGVELTL 396
Query 318 QHDVEEQPRWLYPSMTQMVFGNILRNALNYSQGKSIDIVLQKN----SILIADDGIGLNL 373
E+ + P + + N++ NA+++++ K + I + + ++ + D G+GL
Sbjct 397 DMPEEDVIAEVDPRRVERILRNLIANAIDHAESKPVQIRMAADEDTVAVTVRDFGVGLRP 456
Query 374 PED 376
E+
Sbjct 457 GEE 459
>Q70FG9 Sensor histidine kinase PmrB [Pectobacterium parmentieri]
Length=364
Score = 62.8 bits (151), Expect = 8e-14
Identities = 60/269 (22%), Positives = 128/269 (48%), Gaps = 29/269 (11%)
Query 166 FSPITRLANTLEQIDWTHQDKQDSLFSDISTNGNM-EAEYLKAALEKYHQVLSQFIRRER 224
F ++ + L ++ QD+ + ++ E + + + Q L + ++R+R
Sbjct 86 FQAVSWITRPLSRLQEELQDRTAENLEPLPQQSDIKEIAAVTHTINQLFQRLDETLKRDR 145
Query 225 EFTGDVSHELRTPLTILKGNVQLCQTRYGHDKALTRIHNTIEDMQLLVDTLLAIARNTVE 284
+FT DV+HELRTPL ++ +++L Q + H + + I+ M V+ LL +AR +
Sbjct 146 QFTADVAHELRTPLAGIRLHLELHQQQ--HQIDCSSLIKRIDKMVKTVEQLLLLAR-VGQ 202
Query 285 NLNAEQYLLSKIIHDLIIDLEPISQAKGIDTQIQHDVEEQPRWLYP----------SMTQ 334
+A + + D+I ++ ++ +++ +W+ P ++ Q
Sbjct 203 EFSAGHHENVAFLKDVIFPMQDEL------AEMLQKRQQRLKWVLPQEDVTLHGDATLLQ 256
Query 335 MVFGNILRNALNYS-QGKSIDIVL---QKNSILIADDGIGLNLPEDVKVKALNES--QLD 388
++ N++ NA YS + I + L Q + I D+G G+ ++ KV L+++ ++D
Sbjct 257 LLLRNLVENAYRYSPETSQITVSLNTQQHVELQIEDEGQGI---DESKVGELSKAFVRMD 313
Query 389 VNVKGHGIGLQLVQKLCKQLNWRVELFDR 417
G G+GL +V ++ + N + L +R
Sbjct 314 SRYGGIGLGLSIVTRIAQLHNGKFFLSNR 342
>O31661 Sporulation kinase E [Bacillus subtilis (strain 168)]
Length=738
Score = 63.5 bits (153), Expect = 8e-14
Identities = 57/261 (22%), Positives = 117/261 (45%), Gaps = 25/261 (10%)
Query 169 ITRLANTLEQIDWTHQDKQDSLFSDISTNGNMEAEYLKAALEKYHQVLSQFIRREREF-- 226
I LA+ QI++ D + N +E + + ++ + + + + +E
Sbjct 447 IENLASPARQINFDEMDNEIPFLLSSGDNRKLEFSFKRNIIQNMNLAIFKDVTERKELEE 506
Query 227 --------------TGDVSHELRTPLTILKGNVQLCQTRYGHDKAL--TRIHNTIEDMQL 270
++HE+R P+T LKG +QL + D AL I + ++ ++
Sbjct 507 RLRKSDTLHVVGELAAGIAHEIRNPMTALKGFIQLLKGSVEGDYALYFNVITSELKRIES 566
Query 271 LVDTLLAIARNTVENLNAEQYLLSKIIHDLIIDLEPISQAKGIDTQIQHDVEEQPRWLYP 330
++ L +A+ + + E+ +++I+ D I L + + Q+ + P + P
Sbjct 567 IITEFLILAK--PQAIMYEEKHVTQIMRDTIDLLNAQANLSNVQMQLDLIDDIPPIYCEP 624
Query 331 SMTQMVFGNILRNALN-YSQGKSIDI---VLQKNSILIADDGIGLNLPEDVKVKALNESQ 386
+ + VF NIL+NA+ G +I + L ++ +LI+ G+ + ED K+K L E
Sbjct 625 NQLKQVFINILKNAIEVMPDGGNIFVTIKALDQDHVLISLKDEGIGMTED-KLKRLGEPF 683
Query 387 LDVNVKGHGIGLQLVQKLCKQ 407
+G G+GL + K+ ++
Sbjct 684 YTTKERGTGLGLMVSYKIIEE 704
>Q93CB7 Sensor histidine kinase MtrB [Mycolicibacterium paratuberculosis
(strain ATCC BAA-968 / K-10)]
Length=565
Score = 63.2 bits (152), Expect = 9e-14
Identities = 47/175 (27%), Positives = 88/175 (50%), Gaps = 17/175 (10%)
Query 216 LSQFIRREREFTGDVSHELRTPLTILKGNVQLCQTRYGH----DKALTR----IHNTIED 267
L +F +R FT DVSHELRTPLT ++ L Y H D L R + N ++
Sbjct 289 LEEFGNLQRRFTSDVSHELRTPLTTVRMAADLI---YDHSADLDPTLARSTELMVNELDR 345
Query 268 MQLLVDTLLAIARNT--VENLNAEQYLLSKIIHDLIIDLEPISQAKGIDTQIQHDVEEQP 325
+ L++ LL I+R+ V L+ E L + + ++ +++ GI+ Q++ EE
Sbjct 346 FESLLNDLLEISRHDAGVAELSVEAVDLRSTVQSALSNVGHLAEDAGIELQVELPAEEVI 405
Query 326 RWLYPSMTQMVFGNILRNALNYSQGKSIDIVLQKN----SILIADDGIGLNLPED 376
+ + + N++ NA+++++ K + I + + ++ + D G+GL E+
Sbjct 406 AEVDTRRVERILRNLIANAIDHAEHKPVKIRMAADEDTVAVTVRDYGVGLRPGEE 460
>Q56128 Sensor histidine kinase RcsC [Salmonella typhi]
Length=948
Score = 62.4 bits (150), Expect = 2e-13
Identities = 64/255 (25%), Positives = 120/255 (47%), Gaps = 25/255 (10%)
Query 174 NTLEQIDWTHQDKQDS-----LFSDISTNGNMEAEYLKAALEKYHQVLSQFIRREREFTG 228
NT QI + H ++ + D+ST ME +L++ Q Q + + F
Sbjct 421 NTNLQISFVHSRYRNENVAICVLVDVSTRVKMEE-----SLQEMAQAAEQASQSKSMFLA 475
Query 229 DVSHELRTPLTILKGNVQLCQTR---YGHDKALTRIHNTIEDMQLLVDTLLAIARNTVEN 285
VSHELRTPL + GN+ L QT+ G D+ +T ++N+ + ++ +L ++ E
Sbjct 476 TVSHELRTPLYGIIGNLDLLQTKELPKGVDRLVTAMNNSSSLLLKIISDILDFSKIESEQ 535
Query 286 LNAE--QYLLSKIIHDLIIDLEPISQAK--GIDTQIQHDVEEQPRWLYPSMTQMVFGNIL 341
L E ++ ++++ + + P+ K G+ I+ DV P Q V N+L
Sbjct 536 LKIEPREFSPREVMNHITANYLPLVVRKQLGLYCFIEPDVPVSLNG-DPMRLQQVISNLL 594
Query 342 RNALNYSQGKSIDIVLQKN----SILIADDGIGLNLPEDVKV---KALNESQLDVNVKGH 394
NA+ ++ I + ++ + SI + D G+G+ E V++ + + N +G
Sbjct 595 SNAIKFTDIGCIVLHVRCDGDYLSIRVRDTGVGIPAKEVVRLFDPFFQVGTGVQRNFQGT 654
Query 395 GIGLQLVQKLCKQLN 409
G+GL + +KL ++
Sbjct 655 GLGLAICEKLISMMD 669
Score = 20.4 bits (41), Expect = 2.4
Identities = 13/53 (25%), Positives = 26/53 (49%), Gaps = 9/53 (17%)
Query 321 VEEQPRWLY--------PSMTQMVFGNILR-NALNYSQGKSIDIVLQKNSILI 364
++ +PRW+ P ++V L ++L+ +D+VL++ ILI
Sbjct 264 IKAEPRWMQERSWFGYTPGFRELVLKKSLPPSSLSIVYSVPVDLVLERIRILI 316
>Q8CU87 Sensor protein kinase WalK [Staphylococcus epidermidis
(strain ATCC 12228 / FDA PCI 1200)]
Length=610
Score = 62.0 bits (149), Expect = 2e-13
Identities = 72/287 (25%), Positives = 127/287 (44%), Gaps = 52/287 (18%)
Query 165 YFSPITRLAN--TLEQIDWTHQDKQDSLFSDISTNGNM-----------EAEYLKAALEK 211
Y + L N +LE+I Q+ DS DI+ + E ++ +
Sbjct 309 YMLGVLNLENEFSLEEI----QENSDSFLLDINEEEGIIARVNFSTIVQETGFVTGYIAV 364
Query 212 YHQVLSQ--FIRREREFTGDVSHELRTPLTILKGNVQLCQTRYGHDKALTRIHNTI---- 265
H V Q R REF +VSHELRTPLT + ++ + DK L ++
Sbjct 365 LHDVTEQQQVERERREFVANVSHELRTPLTSMNSYIEALEEGAWQDKELAPSFLSVTREE 424
Query 266 -EDMQLLVDTLLAIAR--NTVENLNAEQYLLSKIIHDLIIDLEPISQAKGIDTQIQHDVE 322
E M LV+ LL +++ N + + E + I+ +I E ++ DT ++
Sbjct 425 TERMIRLVNDLLQLSKMDNESDQITKEIIDFNMFINKIINRHEMAAK----DTTFVREIP 480
Query 323 EQPRW--LYPSMTQMVFGNILRNALNYSQG-KSIDIVLQKN------SILIADDGIGLNL 373
+Q + + P VF N++ NA+ YS+G K ++ +++N +I I D+GIG+ +
Sbjct 481 QQTIFAEIDPDKMTQVFDNVITNAMKYSRGEKRVEFHVKQNALYNRMTIRIKDNGIGIPI 540
Query 374 PEDVKV--------KALNESQLDVNVKGHGIGLQLVQKLCKQLNWRV 412
+ K+ KA + G G+GL + +++ + N R+
Sbjct 541 NKVDKIFDRFYRVDKARTR-----KMGGTGLGLAISKEIVEAHNGRI 582
Score = 22.7 bits (47), Expect = 0.44
Identities = 55/256 (21%), Positives = 103/256 (40%), Gaps = 45/256 (18%)
Query 98 KTGVHRIFID---GKERMTVYG---EKSGQHVLLVFGESNVNKL---------VWLFGLA 142
+T H + D GKER+ VY + Q + ++ ES +N + +++ G A
Sbjct 132 QTNDHMVLKDYGSGKERVWVYNIPVKVDKQTIGDIYIESKINDVYNQLNNINQIFIVGTA 191
Query 143 PLMFSLFVLYSFLWWSNRRAKRYFSPITRLANTLEQIDWTHQDKQDSLFSDISTNGNMEA 202
+F +L F+ A+ PIT + N ++ + ++ ++ GN E
Sbjct 192 ISLFITVILGFFI------ARTITKPITDMRNQTVEMSKGNYTQRVKIY------GNDEI 239
Query 203 EYLKAALEKYHQVLSQFIRREREFTGDVSHELRTPLTILKGNV----QLCQTRYGHDKAL 258
L A LS+ ++ + T L + +T + + + + R +D AL
Sbjct 240 GELALAFNN----LSKRVQEAQANTESEKRRLDSVITHMSDGILATDRRGRVRIANDMAL 295
Query 259 TRIHNTIEDM--QLLVDTLLAIARNTVENL--NAEQYLLSKIIHDLII---DLEPISQAK 311
+ ED+ ++ L ++E + N++ +LL + II + I Q
Sbjct 296 KMLGLAKEDVIGYYMLGVLNLENEFSLEEIQENSDSFLLDINEEEGIIARVNFSTIVQET 355
Query 312 GIDT---QIQHDVEEQ 324
G T + HDV EQ
Sbjct 356 GFVTGYIAVLHDVTEQ 371
>Q5HK19 Sensor protein kinase WalK [Staphylococcus epidermidis
(strain ATCC 35984 / RP62A)]
Length=610
Score = 62.0 bits (149), Expect = 2e-13
Identities = 72/287 (25%), Positives = 127/287 (44%), Gaps = 52/287 (18%)
Query 165 YFSPITRLAN--TLEQIDWTHQDKQDSLFSDISTNGNM-----------EAEYLKAALEK 211
Y + L N +LE+I Q+ DS DI+ + E ++ +
Sbjct 309 YMLGVLNLENEFSLEEI----QENSDSFLLDINEEEGIIARVNFSTIVQETGFVTGYIAV 364
Query 212 YHQVLSQ--FIRREREFTGDVSHELRTPLTILKGNVQLCQTRYGHDKALTRIHNTI---- 265
H V Q R REF +VSHELRTPLT + ++ + DK L ++
Sbjct 365 LHDVTEQQQVERERREFVANVSHELRTPLTSMNSYIEALEEGAWQDKELAPSFLSVTREE 424
Query 266 -EDMQLLVDTLLAIAR--NTVENLNAEQYLLSKIIHDLIIDLEPISQAKGIDTQIQHDVE 322
E M LV+ LL +++ N + + E + I+ +I E ++ DT ++
Sbjct 425 TERMIRLVNDLLQLSKMDNESDQITKEIIDFNMFINKIINRHEMAAK----DTTFVREIP 480
Query 323 EQPRW--LYPSMTQMVFGNILRNALNYSQG-KSIDIVLQKN------SILIADDGIGLNL 373
+Q + + P VF N++ NA+ YS+G K ++ +++N +I I D+GIG+ +
Sbjct 481 QQTIFAEIDPDKMTQVFDNVITNAMKYSRGEKRVEFHVKQNALYNRMTIRIKDNGIGIPI 540
Query 374 PEDVKV--------KALNESQLDVNVKGHGIGLQLVQKLCKQLNWRV 412
+ K+ KA + G G+GL + +++ + N R+
Sbjct 541 NKVDKIFDRFYRVDKARTR-----KMGGTGLGLAISKEIVEAHNGRI 582
Score = 22.7 bits (47), Expect = 0.44
Identities = 55/256 (21%), Positives = 103/256 (40%), Gaps = 45/256 (18%)
Query 98 KTGVHRIFID---GKERMTVYG---EKSGQHVLLVFGESNVNKL---------VWLFGLA 142
+T H + D GKER+ VY + Q + ++ ES +N + +++ G A
Sbjct 132 QTNDHMVLKDYGSGKERVWVYNIPVKVDKQTIGDIYIESKINDVYNQLNNINQIFIVGTA 191
Query 143 PLMFSLFVLYSFLWWSNRRAKRYFSPITRLANTLEQIDWTHQDKQDSLFSDISTNGNMEA 202
+F +L F+ A+ PIT + N ++ + ++ ++ GN E
Sbjct 192 ISLFITVILGFFI------ARTITKPITDMRNQTVEMSKGNYTQRVKIY------GNDEI 239
Query 203 EYLKAALEKYHQVLSQFIRREREFTGDVSHELRTPLTILKGNV----QLCQTRYGHDKAL 258
L A LS+ ++ + T L + +T + + + + R +D AL
Sbjct 240 GELALAFNN----LSKRVQEAQANTESEKRRLDSVITHMSDGILATDRRGRVRIANDMAL 295
Query 259 TRIHNTIEDM--QLLVDTLLAIARNTVENL--NAEQYLLSKIIHDLII---DLEPISQAK 311
+ ED+ ++ L ++E + N++ +LL + II + I Q
Sbjct 296 KMLGLAKEDVIGYYMLGVLNLENEFSLEEIQENSDSFLLDINEEEGIIARVNFSTIVQET 355
Query 312 GIDT---QIQHDVEEQ 324
G T + HDV EQ
Sbjct 356 GFVTGYIAVLHDVTEQ 371
>P30844 Sensor protein BasS [Escherichia coli (strain K12)]
Length=363
Score = 61.2 bits (147), Expect = 2e-13
Identities = 70/300 (23%), Positives = 139/300 (46%), Gaps = 29/300 (10%)
Query 140 GLAPLMFSLFVLYSFLWWSNRRAKRYFSPITRLANTLEQIDWTHQDKQDSLFSDISTNGN 199
G+ + +LF+ Y + +R P+ L LE D+L +
Sbjct 73 GVFMVSLTLFICY-------QAVRRITRPLAELQKELEA------RTADNLTPIAIHSAT 119
Query 200 MEAEYLKAALEKYHQVLSQFIRREREFTGDVSHELRTPLTILKGNVQLCQTRYGHDKALT 259
+E E + +AL L+ + ER FT DV+HELRTPL ++ +++L + D A
Sbjct 120 LEIEAVVSALNDLVSRLTSTLDNERLFTADVAHELRTPLAGVRLHLELLAKTHHIDVA-- 177
Query 260 RIHNTIEDMQLLVDTLLAIARNTVENLNAEQYLLSKIIHDLII----DLEPISQAKGIDT 315
+ ++ M V LL +AR ++ ++ Y K++ D+I+ +L + +
Sbjct 178 PLVARLDQMMESVSQLLQLAR-AGQSFSSGNYQHVKLLEDVILPSYDELSTMLDQRQQTL 236
Query 316 QIQHDVEEQPRWLYPSMTQMVFGNILRNALNYS-QGKSIDIVLQKNS---ILIADDGIGL 371
+ + ++ +M+ N++ NA YS QG +I I LQ++ + + D+G G+
Sbjct 237 LLPESAADITVQGDATLLRMLLRNLVENAHRYSPQGSNIMIKLQEDDGAVMAVEDEGPGI 296
Query 372 NLPEDVKVKALNES--QLDVNVKGHGIGLQLVQKLCKQLNWRVELFDREYYLSTHSELNL 429
++ K L+++ ++D G G+GL +V ++ + + + L +R+ T + + L
Sbjct 297 ---DESKCGELSKAFVRMDSRYGGIGLGLSIVSRITQLHHGQFFLQNRQETSGTRAWVRL 353
Lambda K H a alpha
0.323 0.138 0.416 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 3088800
Database: e9a695e6eef211838ac60b38a5bac5aa.SwissProt.fasta
Posted date: Jun 1, 2024 11:16 PM
Number of letters in database: 8,821
Number of sequences in database: 17
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
