BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 0fb8edaff4451b5369ea4e7a3cf3fa26.SwissProt.fasta
           2 sequences; 270 total letters



Query= ACIAD1676

Length=140
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q87AD4 Probable transporter PD_1892 [Xylella fastidiosa (strain T...  108     6e-36
Q9PFB2 Probable transporter XF_0766 [Xylella fastidiosa (strain 9...  107     1e-35


>Q87AD4 Probable transporter PD_1892 [Xylella fastidiosa (strain 
Temecula1 / ATCC 700964)]
Length=135

 Score = 108 bits (270),  Expect = 6e-36
 Identities = 59/133 (44%), Positives = 86/133 (65%), Gaps = 4/133 (3%)

Query  1    MHDFLLAFLGGLLLGTAVVGYLYINGRIAGISGLMAQILDPKTVFKTPAIWFLSGLFITP  60
            M ++    LGG+LLG + V  L +NGRIAGISG++ ++L      +   I F+ GL + P
Sbjct  1    MSEYWYPILGGILLGLSTVMLLLLNGRIAGISGIVGRLLQGGNPAQN--IPFVVGLVLGP  58

Query  61   FIYSMFIET--EIKITANPYMLIIAGLLVGIGTRMGSGCTSGHGICGMSRLSKRSIVATI  118
             ++++  +    + + A    +I+AGLLVG+GTRMG+GCTSGHGI G++R S RSIVAT 
Sbjct  59   LLFTVIFDRFPSVTVAATWPTIIVAGLLVGLGTRMGAGCTSGHGIVGIARHSPRSIVATA  118

Query  119  TFMIAGFITVYVM  131
             F+I+G  T   M
Sbjct  119  IFLISGMATATFM  131


>Q9PFB2 Probable transporter XF_0766 [Xylella fastidiosa (strain 
9a5c)]
Length=135

 Score = 107 bits (268),  Expect = 1e-35
 Identities = 59/133 (44%), Positives = 85/133 (64%), Gaps = 4/133 (3%)

Query  1    MHDFLLAFLGGLLLGTAVVGYLYINGRIAGISGLMAQILDPKTVFKTPAIWFLSGLFITP  60
            M ++    LGG+LLG + V  L +NGRIAGISG++ ++L      +   I F+ GL + P
Sbjct  1    MSEYWYPILGGILLGLSTVMLLLLNGRIAGISGIVGRLLQGGNPAQD--IPFVVGLVLGP  58

Query  61   FIYSMFIET--EIKITANPYMLIIAGLLVGIGTRMGSGCTSGHGICGMSRLSKRSIVATI  118
             ++S+  +    + + A    +I+AGLLVG+GTRM +GCTSGHGI G++R S RSIVAT 
Sbjct  59   LVFSVIFDRFPSVTVAATWPTIIVAGLLVGLGTRMSAGCTSGHGIAGIARHSPRSIVATA  118

Query  119  TFMIAGFITVYVM  131
             F+I+G  T   M
Sbjct  119  IFLISGMATATFM  131



Lambda      K        H        a         alpha
   0.336    0.151    0.462    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 27600


  Database: 0fb8edaff4451b5369ea4e7a3cf3fa26.SwissProt.fasta
    Posted date:  Jun 3, 2024  12:10 AM
  Number of letters in database: 270
  Number of sequences in database:  2



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40