BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 5158245ba2cf8fb443b2d4497e00e98a.SwissProt.fasta
           2 sequences; 893 total letters



Query= ACIAD1715

Length=440
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q43923 Putative porin QuiX [Acinetobacter baylyi (strain ATCC 333...  910     0.0   
Q51485 Porin B [Pseudomonas aeruginosa (strain ATCC 15692 / DSM 2...  394     9e-139


>Q43923 Putative porin QuiX [Acinetobacter baylyi (strain ATCC 
33305 / BD413 / ADP1)]
Length=439

 Score = 910 bits (2352),  Expect = 0.0
 Identities = 439/439 (100%), Positives = 439/439 (100%), Gaps = 0/439 (0%)

Query  1    MRHFFKLGLVSAAVLGSQMTLANDFWSQDRQWLLGDWGGERQQLEKQGYKFTASIMSQAA  60
            MRHFFKLGLVSAAVLGSQMTLANDFWSQDRQWLLGDWGGERQQLEKQGYKFTASIMSQAA
Sbjct  1    MRHFFKLGLVSAAVLGSQMTLANDFWSQDRQWLLGDWGGERQQLEKQGYKFTASIMSQAA  60

Query  61   TNLDGGYNDSNTLENAGQLTLGANFDLSKIAGWEDTTAAIMITKRDGNSLTLERIKDPRS  120
            TNLDGGYNDSNTLENAGQLTLGANFDLSKIAGWEDTTAAIMITKRDGNSLTLERIKDPRS
Sbjct  61   TNLDGGYNDSNTLENAGQLTLGANFDLSKIAGWEDTTAAIMITKRDGNSLTLERIKDPRS  120

Query  121  TTLGNTQEIYGRGKIWRLTQAWVKKGFNDNTVQFKIGRMGMSDDFNSSQCEFQNLLLCGG  180
            TTLGNTQEIYGRGKIWRLTQAWVKKGFNDNTVQFKIGRMGMSDDFNSSQCEFQNLLLCGG
Sbjct  121  TTLGNTQEIYGRGKIWRLTQAWVKKGFNDNTVQFKIGRMGMSDDFNSSQCEFQNLLLCGG  180

Query  181  QLGKSIGSIWYNWPVGLWGTNVKYQFAPEWTLGLGVYEVNPDNVKTQSNSDGFNLDMNNV  240
            QLGKSIGSIWYNWPVGLWGTNVKYQFAPEWTLGLGVYEVNPDNVKTQSNSDGFNLDMNNV
Sbjct  181  QLGKSIGSIWYNWPVGLWGTNVKYQFAPEWTLGLGVYEVNPDNVKTQSNSDGFNLDMNNV  240

Query  241  KGATIPVELAWKPKLAMFNGLPGEYKVGALYSTADANDVGTVSKVHDSKHSFWINTQQQL  300
            KGATIPVELAWKPKLAMFNGLPGEYKVGALYSTADANDVGTVSKVHDSKHSFWINTQQQL
Sbjct  241  KGATIPVELAWKPKLAMFNGLPGEYKVGALYSTADANDVGTVSKVHDSKHSFWINTQQQL  300

Query  301  TQHNDNAKRGLFVSFNGVVNDKATTMVESTQQLALWYKGPFDSRPNDSIGFGLANYVVNK  360
            TQHNDNAKRGLFVSFNGVVNDKATTMVESTQQLALWYKGPFDSRPNDSIGFGLANYVVNK
Sbjct  301  TQHNDNAKRGLFVSFNGVVNDKATTMVESTQQLALWYKGPFDSRPNDSIGFGLANYVVNK  360

Query  361  RVRDRQIATNESRGYYEYDDLASNYVPIQHDELNVELNYTYQWSPAVMLRPNIQYIHQPA  420
            RVRDRQIATNESRGYYEYDDLASNYVPIQHDELNVELNYTYQWSPAVMLRPNIQYIHQPA
Sbjct  361  RVRDRQIATNESRGYYEYDDLASNYVPIQHDELNVELNYTYQWSPAVMLRPNIQYIHQPA  420

Query  421  GVKEVDDAWVAGLSMRLNF  439
            GVKEVDDAWVAGLSMRLNF
Sbjct  421  GVKEVDDAWVAGLSMRLNF  439


>Q51485 Porin B [Pseudomonas aeruginosa (strain ATCC 15692 / DSM 
22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 
/ PAO1)]
Length=454

 Score = 394 bits (1013),  Expect = 9e-139
 Identities = 201/442 (45%), Positives = 272/442 (62%), Gaps = 19/442 (4%)

Query  10   VSAAVLGSQMTLANDFWSQDRQWLLGDWGGERQQLEKQGYKFTASIMSQAATNLDGGYND  69
            + A  LGS    A  F S + +W+LGDWGG+R +L ++GY F    + +AA NLDGGY+D
Sbjct  20   LGALGLGSAAHAAEAF-SPNSKWMLGDWGGKRTELLEKGYDFKLEYVGEAAANLDGGYDD  78

Query  70   SNTLENAGQLTLGANFDLSKIAGWEDTTAAIMITKRDGNSLTLERIKDPRSTTLGNTQEI  129
              T     Q  LG + DL KI GW+ T     +T+R+G +L+ +RI DPR+  + + QE+
Sbjct  79   DKTGRYTDQFALGVHMDLEKILGWKATEFQFTVTERNGKNLSNDRIGDPRAGHISSVQEV  138

Query  130  YGRGKIWRLTQAWVKKGFNDNTVQFKIGRMGMSDDFNSSQCEFQNLLLCGGQLGKSIGSI  189
            +GRG+ WRLTQ W+K+ + D  +  K GR G  +DFNS  C+FQNL  CG Q+G   GSI
Sbjct  139  WGRGQTWRLTQLWLKQQYFDGALDVKFGRFGEGEDFNSFPCDFQNLAFCGSQVGNWAGSI  198

Query  190  WYNWPVGLWGTNVKYQFAPEWTLGLGVYEVNPDNVKTQSNSDGFNLDMNNVKGATIPVEL  249
            WYNWPV  W   VKY FAP+W + +G YE NP N++T    +GF +  +  KGA +PVEL
Sbjct  199  WYNWPVSQWALRVKYNFAPDWYVQVGAYEQNPSNLET---GNGFKMSGSGTKGALLPVEL  255

Query  250  AWKPKLAMFNGLPGEYKVGALYSTADANDV------------GTVSKVHDSKHSFWINTQ  297
             W+PK+     LPGEY++G  YSTA A+DV            G   K   SKH +W+  Q
Sbjct  256  IWQPKVGA-EQLPGEYRLGYYYSTAKADDVYDDVDGQPQGLTGNDFKSRGSKHGWWVVAQ  314

Query  298  QQLTQHNDNAKRGLFVSFNGVVNDKATTMVESTQQLALWYKGPFDSRPNDSIGFGLANYV  357
            QQ+T HN +A RGL +  N  V+DKAT +V++ QQL + YKGPFD+RP D IG G+A   
Sbjct  315  QQVTSHNGDASRGLSLFANLTVHDKATNVVDNYQQLGVVYKGPFDARPKDDIGLGIARIH  374

Query  358  VNKRVRDRQIATNESRGYYEYDDLASNYVPIQHDELNVELNYTYQWSPAVMLRPNIQYIH  417
            VN  V+ RQ   N+  G  +YD+    Y P+Q  E N EL Y    +  + +RPN+QYI 
Sbjct  375  VNDDVKKRQRLVNQVNGIDDYDN--PLYQPLQDTEYNAELYYGVHVTDWLTVRPNLQYIK  432

Query  418  QPAGVKEVDDAWVAGLSMRLNF  439
            QP GV EVD+A VAG+ ++  F
Sbjct  433  QPGGVDEVDNALVAGIKIQTVF  454



Lambda      K        H        a         alpha
   0.318    0.134    0.416    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 330057


  Database: 5158245ba2cf8fb443b2d4497e00e98a.SwissProt.fasta
    Posted date:  May 20, 2024  7:21 AM
  Number of letters in database: 893
  Number of sequences in database:  2



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40