BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 3f288af58bbcdbd4bdf9b09553a14e7e.TrEMBL.fasta
32 sequences; 2,237 total letters
Query= ACIAD1787
Length=71
Score E
Sequences producing significant alignments: (Bits) Value
Q6FBD9 Cold shock-like protein [Acinetobacter baylyi (strain ATCC... 141 4e-50
A0A7G2SFV8 Cold-shock protein [Acinetobacter sp] 141 4e-50
A0A1B2M328 Cold-shock protein [Acinetobacter larvae] 120 1e-41
A0A3A8EBF4 Cold-shock protein [Acinetobacter guerrae] 119 2e-41
A0A150HV35 Cold shock-like protein CspG [Acinetobacter venetianus] 117 2e-40
A0A7G3BTC6 Cold-shock protein [Acinetobacter sp] 117 2e-40
D0SHX7 Cold shock-like protein CspG [Acinetobacter junii SH205] 116 4e-40
S7WJJ3 Cold shock protein CspA [Acinetobacter junii CIP 107470 = ... 116 4e-40
A0A2R4UNX9 Cold-shock protein [Acinetobacter junii] 116 4e-40
N9MI34 CSD domain-containing protein [Acinetobacter sp. CIP 53.82] 113 5e-39
A0A0F3LRB2 Cold-shock protein [Acinetobacter indicus] 113 5e-39
V2U372 CSD domain-containing protein [Acinetobacter indicus CIP 1... 113 5e-39
N9MI90 CSD domain-containing protein [Acinetobacter dispersus] 113 6e-39
A0A0E2GMK5 Putative cold shock protein [Acinetobacter radioresist... 113 8e-39
A0A062BYC2 'Cold-shock' DNA-binding domain protein [Acinetobacter... 113 8e-39
A0A2T1IWN0 Cold-shock protein [Acinetobacter radioresistens] 113 8e-39
A0A0M3AK08 Cold-shock protein [Acinetobacter sp. AG1] 112 2e-38
N9NEN7 CSD domain-containing protein [Acinetobacter modestus] 112 2e-38
A0A1Q3N6P3 Cold-shock protein [Acinetobacter sp. 39-4] 112 2e-38
A0A1Q3N9H5 Cold-shock protein [Acinetobacter sp. 38-8] 112 2e-38
A0A8I0S8M0 Cold-shock protein [Acinetobacter sp. SK-43] 111 3e-38
A0A8F6MMF8 Cold-shock protein [Acinetobacter junii] 111 3e-38
Q9ZFK8 Cold-shock protein [Myxococcus xanthus] 89.4 2e-29
Q9ZAL0 Cold shock protein, CSPA [Vibrio cholerae] 89.4 2e-29
O32772 Major cold shock protein [Lactococcus lactis] 85.1 1e-27
Q7CQZ5 RNA chaperone, negative regulator of cspA transcription [S... 85.1 1e-27
Q9ZFK5 Cold-shock protein [Myxococcus xanthus] 84.3 2e-27
Q9ZFK6 Cold-shock protein [Myxococcus xanthus] 83.2 6e-27
Q9ZFK7 Cold-shock protein [Myxococcus xanthus] 82.8 8e-27
Q9ZFK9 Cold-shock protein [Myxococcus xanthus] 82.0 2e-26
Q9EW90 Cold-shock like protein [Streptomyces nodosus] 81.6 2e-26
Q9JZZ4 Cold-shock domain family protein [Neisseria meningitidis s... 81.6 2e-26
>Q6FBD9 Cold shock-like protein [Acinetobacter baylyi (strain
ATCC 33305 / BD413 / ADP1)]
Length=70
Score = 141 bits (356), Expect = 4e-50
Identities = 70/70 (100%), Positives = 70/70 (100%), Gaps = 0/70 (0%)
Query 1 MSNTIQGTVKWFNETKGFGFISSDSGEDVFAHYSEISNSGFKTLLEGQRVEFLVVNGKKG 60
MSNTIQGTVKWFNETKGFGFISSDSGEDVFAHYSEISNSGFKTLLEGQRVEFLVVNGKKG
Sbjct 1 MSNTIQGTVKWFNETKGFGFISSDSGEDVFAHYSEISNSGFKTLLEGQRVEFLVVNGKKG 60
Query 61 LQASNISIVK 70
LQASNISIVK
Sbjct 61 LQASNISIVK 70
>A0A7G2SFV8 Cold-shock protein [Acinetobacter sp]
Length=70
Score = 141 bits (356), Expect = 4e-50
Identities = 70/70 (100%), Positives = 70/70 (100%), Gaps = 0/70 (0%)
Query 1 MSNTIQGTVKWFNETKGFGFISSDSGEDVFAHYSEISNSGFKTLLEGQRVEFLVVNGKKG 60
MSNTIQGTVKWFNETKGFGFISSDSGEDVFAHYSEISNSGFKTLLEGQRVEFLVVNGKKG
Sbjct 1 MSNTIQGTVKWFNETKGFGFISSDSGEDVFAHYSEISNSGFKTLLEGQRVEFLVVNGKKG 60
Query 61 LQASNISIVK 70
LQASNISIVK
Sbjct 61 LQASNISIVK 70
>A0A1B2M328 Cold-shock protein [Acinetobacter larvae]
Length=69
Score = 120 bits (300), Expect = 1e-41
Identities = 54/69 (78%), Positives = 65/69 (94%), Gaps = 0/69 (0%)
Query 1 MSNTIQGTVKWFNETKGFGFISSDSGEDVFAHYSEISNSGFKTLLEGQRVEFLVVNGKKG 60
MSNT+ GTVKWFNETKGFGFI +DSG+DVFAHYSEIS++GFKTLLEGQRV+F +V+GKKG
Sbjct 1 MSNTVTGTVKWFNETKGFGFIQADSGQDVFAHYSEISSNGFKTLLEGQRVQFAIVDGKKG 60
Query 61 LQASNISIV 69
QASNI+++
Sbjct 61 PQASNIAVI 69
>A0A3A8EBF4 Cold-shock protein [Acinetobacter guerrae]
Length=71
Score = 119 bits (299), Expect = 2e-41
Identities = 58/70 (83%), Positives = 64/70 (91%), Gaps = 1/70 (1%)
Query 1 MSNTIQGTVKWFNETKGFGFISSDSGEDVFAHYSEISNSGFKTLLEGQRVEFLVVNGKKG 60
MSN GTVKWFNETKGFGFI +DSGEDVFAHYSEISNSGFKTLLEGQRV+F +V GKKG
Sbjct 1 MSNNT-GTVKWFNETKGFGFIQADSGEDVFAHYSEISNSGFKTLLEGQRVQFAIVQGKKG 59
Query 61 LQASNISIVK 70
LQASNI++V+
Sbjct 60 LQASNITVVQ 69
>A0A150HV35 Cold shock-like protein CspG [Acinetobacter venetianus]
Length=73
Score = 117 bits (293), Expect = 2e-40
Identities = 55/69 (80%), Positives = 62/69 (90%), Gaps = 0/69 (0%)
Query 1 MSNTIQGTVKWFNETKGFGFISSDSGEDVFAHYSEISNSGFKTLLEGQRVEFLVVNGKKG 60
MSN I GTVKWFNETKGFGFIS+D+G+DVFAHYSEISN+GFKTL EGQRV+F V+ GKKG
Sbjct 1 MSNNINGTVKWFNETKGFGFISADNGQDVFAHYSEISNNGFKTLFEGQRVKFDVIQGKKG 60
Query 61 LQASNISIV 69
QASNI I+
Sbjct 61 FQASNILIL 69
>A0A7G3BTC6 Cold-shock protein [Acinetobacter sp]
Length=73
Score = 117 bits (293), Expect = 2e-40
Identities = 55/69 (80%), Positives = 62/69 (90%), Gaps = 0/69 (0%)
Query 1 MSNTIQGTVKWFNETKGFGFISSDSGEDVFAHYSEISNSGFKTLLEGQRVEFLVVNGKKG 60
MSN I GTVKWFNETKGFGFIS+D+G+DVFAHYSEISN+GFKTL EGQRV+F V+ GKKG
Sbjct 1 MSNNINGTVKWFNETKGFGFISADNGQDVFAHYSEISNNGFKTLFEGQRVKFDVIQGKKG 60
Query 61 LQASNISIV 69
QASNI I+
Sbjct 61 FQASNILIL 69
>D0SHX7 Cold shock-like protein CspG [Acinetobacter junii SH205]
Length=73
Score = 116 bits (291), Expect = 4e-40
Identities = 54/69 (78%), Positives = 63/69 (91%), Gaps = 0/69 (0%)
Query 1 MSNTIQGTVKWFNETKGFGFISSDSGEDVFAHYSEISNSGFKTLLEGQRVEFLVVNGKKG 60
MSN + GTVKWFNETKGFGFI SD+G+DVFAHYSEI+N+GFKTL EGQRV+F V+ GKKG
Sbjct 1 MSNGMNGTVKWFNETKGFGFIQSDNGQDVFAHYSEIANNGFKTLFEGQRVKFDVMQGKKG 60
Query 61 LQASNISIV 69
LQASNIS++
Sbjct 61 LQASNISVL 69
>S7WJJ3 Cold shock protein CspA [Acinetobacter junii CIP 107470
= MTCC 11364]
Length=73
Score = 116 bits (291), Expect = 4e-40
Identities = 54/69 (78%), Positives = 63/69 (91%), Gaps = 0/69 (0%)
Query 1 MSNTIQGTVKWFNETKGFGFISSDSGEDVFAHYSEISNSGFKTLLEGQRVEFLVVNGKKG 60
MSN + GTVKWFNETKGFGFI SD+G+DVFAHYSEI+N+GFKTL EGQRV+F V+ GKKG
Sbjct 1 MSNGMNGTVKWFNETKGFGFIQSDNGQDVFAHYSEIANNGFKTLFEGQRVKFDVMQGKKG 60
Query 61 LQASNISIV 69
LQASNIS++
Sbjct 61 LQASNISVL 69
>A0A2R4UNX9 Cold-shock protein [Acinetobacter junii]
Length=73
Score = 116 bits (291), Expect = 4e-40
Identities = 54/69 (78%), Positives = 63/69 (91%), Gaps = 0/69 (0%)
Query 1 MSNTIQGTVKWFNETKGFGFISSDSGEDVFAHYSEISNSGFKTLLEGQRVEFLVVNGKKG 60
MSN + GTVKWFNETKGFGFI SD+G+DVFAHYSEI+N+GFKTL EGQRV+F V+ GKKG
Sbjct 1 MSNGMNGTVKWFNETKGFGFIQSDNGQDVFAHYSEIANNGFKTLFEGQRVKFDVMQGKKG 60
Query 61 LQASNISIV 69
LQASNIS++
Sbjct 61 LQASNISVL 69
>N9MI34 CSD domain-containing protein [Acinetobacter sp. CIP 53.82]
Length=69
Score = 113 bits (283), Expect = 5e-39
Identities = 53/69 (77%), Positives = 60/69 (87%), Gaps = 0/69 (0%)
Query 1 MSNTIQGTVKWFNETKGFGFISSDSGEDVFAHYSEISNSGFKTLLEGQRVEFLVVNGKKG 60
MSNT+ GTVKWFNETKGFGFI +DSG+DVFAHYSEI+N GFKTL EGQRVEF +V GKKG
Sbjct 1 MSNTVTGTVKWFNETKGFGFIQADSGQDVFAHYSEITNQGFKTLHEGQRVEFTIVAGKKG 60
Query 61 LQASNISIV 69
QAS I+ +
Sbjct 61 DQASGITAI 69
>A0A0F3LRB2 Cold-shock protein [Acinetobacter indicus]
Length=69
Score = 113 bits (283), Expect = 5e-39
Identities = 53/69 (77%), Positives = 60/69 (87%), Gaps = 0/69 (0%)
Query 1 MSNTIQGTVKWFNETKGFGFISSDSGEDVFAHYSEISNSGFKTLLEGQRVEFLVVNGKKG 60
MSNT+ GTVKWFNETKGFGFI +DSG+DVFAHYSEI+N GFKTL EGQRVEF +V GKKG
Sbjct 1 MSNTVTGTVKWFNETKGFGFIQADSGQDVFAHYSEITNQGFKTLHEGQRVEFTIVAGKKG 60
Query 61 LQASNISIV 69
QAS I+ +
Sbjct 61 DQASGITAI 69
>V2U372 CSD domain-containing protein [Acinetobacter indicus CIP
110367]
Length=69
Score = 113 bits (283), Expect = 5e-39
Identities = 53/69 (77%), Positives = 60/69 (87%), Gaps = 0/69 (0%)
Query 1 MSNTIQGTVKWFNETKGFGFISSDSGEDVFAHYSEISNSGFKTLLEGQRVEFLVVNGKKG 60
MSNT+ GTVKWFNETKGFGFI +DSG+DVFAHYSEI+N GFKTL EGQRVEF +V GKKG
Sbjct 1 MSNTVTGTVKWFNETKGFGFIQADSGQDVFAHYSEITNQGFKTLHEGQRVEFTIVAGKKG 60
Query 61 LQASNISIV 69
QAS I+ +
Sbjct 61 DQASGITAI 69
>N9MI90 CSD domain-containing protein [Acinetobacter dispersus]
Length=73
Score = 113 bits (283), Expect = 6e-39
Identities = 52/70 (74%), Positives = 62/70 (89%), Gaps = 0/70 (0%)
Query 1 MSNTIQGTVKWFNETKGFGFISSDSGEDVFAHYSEISNSGFKTLLEGQRVEFLVVNGKKG 60
MSN + GTVKWFNETKGFGFI SD G+DVFAHYS I+NSGFKTL EGQRV+F ++ GKKG
Sbjct 1 MSNYMSGTVKWFNETKGFGFIQSDDGQDVFAHYSSIANSGFKTLFEGQRVKFDILQGKKG 60
Query 61 LQASNISIVK 70
LQAS+I++V+
Sbjct 61 LQASDITVVQ 70
>A0A0E2GMK5 Putative cold shock protein [Acinetobacter radioresistens
DSM 6976 = NBRC 102413 = CIP 103788]
Length=69
Score = 113 bits (282), Expect = 8e-39
Identities = 52/69 (75%), Positives = 61/69 (88%), Gaps = 0/69 (0%)
Query 1 MSNTIQGTVKWFNETKGFGFISSDSGEDVFAHYSEISNSGFKTLLEGQRVEFLVVNGKKG 60
MSN ++GTVKWFNETKGFGFI +SG DVFAHYSEI+N GFKTL EGQ+V+F VV+GKKG
Sbjct 1 MSNVVKGTVKWFNETKGFGFIQQESGPDVFAHYSEITNQGFKTLYEGQQVQFTVVDGKKG 60
Query 61 LQASNISIV 69
QASNI++V
Sbjct 61 PQASNITLV 69
>A0A062BYC2 'Cold-shock' DNA-binding domain protein [Acinetobacter
sp. 263903-1]
Length=69
Score = 113 bits (282), Expect = 8e-39
Identities = 52/69 (75%), Positives = 61/69 (88%), Gaps = 0/69 (0%)
Query 1 MSNTIQGTVKWFNETKGFGFISSDSGEDVFAHYSEISNSGFKTLLEGQRVEFLVVNGKKG 60
MSN ++GTVKWFNETKGFGFI +SG DVFAHYSEI+N GFKTL EGQ+V+F VV+GKKG
Sbjct 1 MSNVVKGTVKWFNETKGFGFIQQESGPDVFAHYSEITNQGFKTLYEGQQVQFTVVDGKKG 60
Query 61 LQASNISIV 69
QASNI++V
Sbjct 61 PQASNITLV 69
>A0A2T1IWN0 Cold-shock protein [Acinetobacter radioresistens]
Length=69
Score = 113 bits (282), Expect = 8e-39
Identities = 52/69 (75%), Positives = 61/69 (88%), Gaps = 0/69 (0%)
Query 1 MSNTIQGTVKWFNETKGFGFISSDSGEDVFAHYSEISNSGFKTLLEGQRVEFLVVNGKKG 60
MSN ++GTVKWFNETKGFGFI +SG DVFAHYSEI+N GFKTL EGQ+V+F VV+GKKG
Sbjct 1 MSNVVKGTVKWFNETKGFGFIQQESGPDVFAHYSEITNQGFKTLYEGQQVQFTVVDGKKG 60
Query 61 LQASNISIV 69
QASNI++V
Sbjct 61 PQASNITLV 69
>A0A0M3AK08 Cold-shock protein [Acinetobacter sp. AG1]
Length=73
Score = 112 bits (279), Expect = 2e-38
Identities = 52/70 (74%), Positives = 62/70 (89%), Gaps = 0/70 (0%)
Query 1 MSNTIQGTVKWFNETKGFGFISSDSGEDVFAHYSEISNSGFKTLLEGQRVEFLVVNGKKG 60
MS+ + GTVKWFNETKGFGFI SD G+DVFAHYS I+NSGFKTL EGQRV+F V+ GKKG
Sbjct 1 MSSYMNGTVKWFNETKGFGFIQSDDGQDVFAHYSSIANSGFKTLFEGQRVKFDVLQGKKG 60
Query 61 LQASNISIVK 70
LQAS+I+I++
Sbjct 61 LQASDITIIQ 70
>N9NEN7 CSD domain-containing protein [Acinetobacter modestus]
Length=73
Score = 112 bits (279), Expect = 2e-38
Identities = 52/70 (74%), Positives = 62/70 (89%), Gaps = 0/70 (0%)
Query 1 MSNTIQGTVKWFNETKGFGFISSDSGEDVFAHYSEISNSGFKTLLEGQRVEFLVVNGKKG 60
MS+ + GTVKWFNETKGFGFI SD G+DVFAHYS I+NSGFKTL EGQRV+F V+ GKKG
Sbjct 1 MSSYMNGTVKWFNETKGFGFIQSDDGQDVFAHYSSIANSGFKTLFEGQRVKFDVLQGKKG 60
Query 61 LQASNISIVK 70
LQAS+I+I++
Sbjct 61 LQASDITIIQ 70
>A0A1Q3N6P3 Cold-shock protein [Acinetobacter sp. 39-4]
Length=73
Score = 112 bits (279), Expect = 2e-38
Identities = 52/70 (74%), Positives = 62/70 (89%), Gaps = 0/70 (0%)
Query 1 MSNTIQGTVKWFNETKGFGFISSDSGEDVFAHYSEISNSGFKTLLEGQRVEFLVVNGKKG 60
MS+ + GTVKWFNETKGFGFI SD G+DVFAHYS I+NSGFKTL EGQRV+F V+ GKKG
Sbjct 1 MSSYMNGTVKWFNETKGFGFIQSDDGQDVFAHYSSIANSGFKTLFEGQRVKFDVLQGKKG 60
Query 61 LQASNISIVK 70
LQAS+I+I++
Sbjct 61 LQASDITIIQ 70
>A0A1Q3N9H5 Cold-shock protein [Acinetobacter sp. 38-8]
Length=73
Score = 112 bits (279), Expect = 2e-38
Identities = 52/70 (74%), Positives = 62/70 (89%), Gaps = 0/70 (0%)
Query 1 MSNTIQGTVKWFNETKGFGFISSDSGEDVFAHYSEISNSGFKTLLEGQRVEFLVVNGKKG 60
MS+ + GTVKWFNETKGFGFI SD G+DVFAHYS I+NSGFKTL EGQRV+F V+ GKKG
Sbjct 1 MSSYMNGTVKWFNETKGFGFIQSDDGQDVFAHYSSIANSGFKTLFEGQRVKFDVLQGKKG 60
Query 61 LQASNISIVK 70
LQAS+I+I++
Sbjct 61 LQASDITIIQ 70
>A0A8I0S8M0 Cold-shock protein [Acinetobacter sp. SK-43]
Length=69
Score = 111 bits (278), Expect = 3e-38
Identities = 51/65 (78%), Positives = 60/65 (92%), Gaps = 0/65 (0%)
Query 5 IQGTVKWFNETKGFGFISSDSGEDVFAHYSEISNSGFKTLLEGQRVEFLVVNGKKGLQAS 64
+ GTVKWFNETKGFGFI SD+G+DVFAHYSEI+N+GFKTL EGQRV+F V+ GKKGLQAS
Sbjct 1 MNGTVKWFNETKGFGFIQSDNGQDVFAHYSEIANNGFKTLFEGQRVKFDVMQGKKGLQAS 60
Query 65 NISIV 69
NIS++
Sbjct 61 NISVL 65
>A0A8F6MMF8 Cold-shock protein [Acinetobacter junii]
Length=69
Score = 111 bits (278), Expect = 3e-38
Identities = 51/65 (78%), Positives = 60/65 (92%), Gaps = 0/65 (0%)
Query 5 IQGTVKWFNETKGFGFISSDSGEDVFAHYSEISNSGFKTLLEGQRVEFLVVNGKKGLQAS 64
+ GTVKWFNETKGFGFI SD+G+DVFAHYSEI+N+GFKTL EGQRV+F V+ GKKGLQAS
Sbjct 1 MNGTVKWFNETKGFGFIQSDNGQDVFAHYSEIANNGFKTLFEGQRVKFDVMQGKKGLQAS 60
Query 65 NISIV 69
NIS++
Sbjct 61 NISVL 65
>Q9ZFK8 Cold-shock protein [Myxococcus xanthus]
Length=66
Score = 89.4 bits (220), Expect = 2e-29
Identities = 40/63 (63%), Positives = 49/63 (78%), Gaps = 0/63 (0%)
Query 7 GTVKWFNETKGFGFISSDSGEDVFAHYSEISNSGFKTLLEGQRVEFLVVNGKKGLQASNI 66
GTVKWFN+ KGFGFI+ D+GEDVF H++ I+ GF+TL EGQ+VEF V G KGLQA N+
Sbjct 4 GTVKWFNDAKGFGFIAQDNGEDVFCHHTAINMDGFRTLQEGQQVEFEVTRGPKGLQAQNV 63
Query 67 SIV 69
V
Sbjct 64 RAV 66
>Q9ZAL0 Cold shock protein, CSPA [Vibrio cholerae]
Length=70
Score = 89.4 bits (220), Expect = 2e-29
Identities = 42/67 (63%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Query 1 MSNTIQGTVKWFNETKGFGFISSDSG-EDVFAHYSEISNSGFKTLLEGQRVEFLVVNGKK 59
MS + G+VKWFNETKGFGF++ D+G DVF H + I + GFKTL EGQRV F+V GKK
Sbjct 1 MSTKMTGSVKWFNETKGFGFLTQDNGGNDVFVHLNSIQSEGFKTLAEGQRVSFIVEQGKK 60
Query 60 GLQASNI 66
G QASN+
Sbjct 61 GPQASNV 67
>O32772 Major cold shock protein [Lactococcus lactis]
Length=66
Score = 85.1 bits (209), Expect = 1e-27
Identities = 40/61 (66%), Positives = 49/61 (80%), Gaps = 0/61 (0%)
Query 6 QGTVKWFNETKGFGFISSDSGEDVFAHYSEISNSGFKTLLEGQRVEFLVVNGKKGLQASN 65
+GTVKWFN KGFGFI+S+ G+DVFAH+S+I SGFKTL EGQ+V F V G++G QA N
Sbjct 3 KGTVKWFNPDKGFGFITSEDGQDVFAHFSQIQTSGFKTLDEGQKVTFDVEAGQRGPQAVN 62
Query 66 I 66
I
Sbjct 63 I 63
>Q7CQZ5 RNA chaperone, negative regulator of cspA transcription
[Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)]
Length=69
Score = 85.1 bits (209), Expect = 1e-27
Identities = 39/64 (61%), Positives = 50/64 (78%), Gaps = 1/64 (2%)
Query 5 IQGTVKWFNETKGFGFISSDSG-EDVFAHYSEISNSGFKTLLEGQRVEFLVVNGKKGLQA 63
I+G VKWFNE+KGFGFI+ + G +DVF H+S I +GFKTL EGQRVEF + NG KG A
Sbjct 4 IKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63
Query 64 SNIS 67
+N++
Sbjct 64 ANVT 67
>Q9ZFK5 Cold-shock protein [Myxococcus xanthus]
Length=68
Score = 84.3 bits (207), Expect = 2e-27
Identities = 39/61 (64%), Positives = 47/61 (77%), Gaps = 1/61 (2%)
Query 7 GTVKWFNETKGFGFISSDSG-EDVFAHYSEISNSGFKTLLEGQRVEFLVVNGKKGLQASN 65
GTVKWFN+ KGFGFI+ D G EDVF H++ I+ GF+TL EGQ+VEF V G KGLQA N
Sbjct 4 GTVKWFNDAKGFGFITQDGGGEDVFCHHTAINMDGFRTLAEGQKVEFEVTRGPKGLQAQN 63
Query 66 I 66
+
Sbjct 64 V 64
>Q9ZFK6 Cold-shock protein [Myxococcus xanthus]
Length=67
Score = 83.2 bits (204), Expect = 6e-27
Identities = 38/61 (62%), Positives = 47/61 (77%), Gaps = 1/61 (2%)
Query 7 GTVKWFNETKGFGFISSDSG-EDVFAHYSEISNSGFKTLLEGQRVEFLVVNGKKGLQASN 65
GTVKWFN+ KGFGF++ D G EDVF H++ I+ GF+TL EGQ+VEF V G KGLQA N
Sbjct 4 GTVKWFNDAKGFGFLTQDGGGEDVFCHHTAINMDGFRTLQEGQKVEFEVTRGPKGLQAQN 63
Query 66 I 66
+
Sbjct 64 V 64
>Q9ZFK7 Cold-shock protein [Myxococcus xanthus]
Length=67
Score = 82.8 bits (203), Expect = 8e-27
Identities = 40/61 (66%), Positives = 46/61 (75%), Gaps = 1/61 (2%)
Query 7 GTVKWFNETKGFGFISSDSG-EDVFAHYSEISNSGFKTLLEGQRVEFLVVNGKKGLQASN 65
GTVKWFN+ KGFGFI D G EDVF H+S I+ GF+TL EGQ+VEF V G KGLQA N
Sbjct 4 GTVKWFNDAKGFGFIVQDGGGEDVFVHHSAINMDGFRTLQEGQKVEFEVGRGPKGLQAQN 63
Query 66 I 66
+
Sbjct 64 V 64
>Q9ZFK9 Cold-shock protein [Myxococcus xanthus]
Length=68
Score = 82.0 bits (201), Expect = 2e-26
Identities = 38/64 (59%), Positives = 46/64 (72%), Gaps = 1/64 (2%)
Query 7 GTVKWFNETKGFGFISSDSG-EDVFAHYSEISNSGFKTLLEGQRVEFLVVNGKKGLQASN 65
GTVKWFN+ KGFGFI+ D G DVF H++ I GF+TL EGQ+VEF G KGLQA N
Sbjct 4 GTVKWFNDAKGFGFIAQDDGGADVFCHHTAIQTDGFRTLAEGQKVEFETRKGPKGLQAEN 63
Query 66 ISIV 69
+ +V
Sbjct 64 VRVV 67
>Q9EW90 Cold-shock like protein [Streptomyces nodosus]
Length=67
Score = 81.6 bits (200), Expect = 2e-26
Identities = 37/63 (59%), Positives = 45/63 (71%), Gaps = 0/63 (0%)
Query 6 QGTVKWFNETKGFGFISSDSGEDVFAHYSEISNSGFKTLLEGQRVEFLVVNGKKGLQASN 65
QGTVKWFN KG+GFI+ D G DVF HYS I G++TL EGQRVEF + G+KG QA
Sbjct 3 QGTVKWFNAEKGYGFIAVDGGADVFVHYSAIQMDGYRTLEEGQRVEFEISQGQKGPQADM 62
Query 66 ISI 68
+ +
Sbjct 63 VRV 65
>Q9JZZ4 Cold-shock domain family protein [Neisseria meningitidis
serogroup B (strain MC58)]
Length=67
Score = 81.6 bits (200), Expect = 2e-26
Identities = 40/61 (66%), Positives = 46/61 (75%), Gaps = 1/61 (2%)
Query 7 GTVKWFNETKGFGFISSDSG-EDVFAHYSEISNSGFKTLLEGQRVEFLVVNGKKGLQASN 65
G VKWFN+ KGFGFI+ D G ED+FAH+S I+ GFKTL EGQRV F V G KG QA+N
Sbjct 4 GIVKWFNDAKGFGFITPDEGGEDLFAHFSAINMEGFKTLKEGQRVSFDVTTGPKGKQAAN 63
Query 66 I 66
I
Sbjct 64 I 64
Lambda K H a alpha
0.323 0.138 0.398 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 66102
Database: 3f288af58bbcdbd4bdf9b09553a14e7e.TrEMBL.fasta
Posted date: May 10, 2024 7:39 PM
Number of letters in database: 2,237
Number of sequences in database: 32
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
