BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 110e52378b50eb80abe16ef879f5225f.SwissProt.fasta
10 sequences; 8,621 total letters
Query= ACIAD1788
Length=875
Score E
Sequences producing significant alignments: (Bits) Value
Q9I3K1 Type VI secretion system spike protein VgrG2a [Pseudomonas... 225 4e-65
Q9I6M7 Type VI secretion system spike protein VgrG2b [Pseudomonas... 227 4e-65
Q9I737 Type VI secretion system spike protein VgrG1b [Pseudomonas... 159 1e-43
Q9I741 Type VI secretion system spike protein VgrG1a [Pseudomonas... 151 3e-41
Q9I0F3 Type VI secretion system spike protein VgrG1c [Pseudomonas... 146 2e-39
Q9KNE7 Type VI secretion system spike protein VgrG2 [Vibrio chole... 143 2e-38
A0A0H3AIG7 Actin cross-linking toxin VgrG1 [Vibrio cholerae serot... 144 4e-38
Q9KS45 Actin cross-linking toxin VgrG1 [Vibrio cholerae serotype ... 144 4e-38
Q9KN42 Type VI secretion system spike protein VgrG3 [Vibrio chole... 140 4e-37
Q0PZH5 Type VI secretion system spike protein VgrG2 [Aeromonas hy... 125 1e-32
>Q9I3K1 Type VI secretion system spike protein VgrG2a [Pseudomonas
aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116
/ JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)]
Length=842
Score = 225 bits (573), Expect = 4e-65
Identities = 141/405 (35%), Positives = 217/405 (54%), Gaps = 22/405 (5%)
Query 440 PQRAKVVGPEGEQVHVDEWGRIKVRFLFTRSEDHSHDGGAGSNDNDTDSAWVDVLTPWAG 499
PQ A VVGP GE++H DEWGR+KV+F + R H ++ + W+ V WAG
Sbjct 370 PQIATVVGPAGEEIHCDEWGRVKVQFPWDREGRH----------DEFSTCWIRVAQNWAG 419
Query 500 EGYGARFLPRIGEIVVIDYFDGDIDRPFVLGRIHEAERSPTKFDIKGQLPHTRHLSGIRS 559
+G +PRIG+ V++DY DGD D+P V GR + A P LP + LS I+S
Sbjct 420 ADWGHMAIPRIGQEVIVDYLDGDCDQPIVTGRTYRATNRPPY-----ALPDHKILSTIKS 474
Query 560 EEIQGSGYNQLRFDDTTGQISSQLHSSHGATQLNLGNLSHPKEQLESEGRGEGFELRTDQ 619
+E +GS N+LR DDTT QIS+ L S HGA+ L+LG L+HP+ + + RGEGFELRTD+
Sbjct 475 KEYKGSRANELRIDDTTAQISAALMSDHGASALHLGYLTHPRPE-GGKPRGEGFELRTDE 533
Query 620 WGAVRAGEGLHLTTHKQEQAQGQHLDAKEASQQLESSLNNAKALSEVAKNQQ-----TDP 674
GAVRA +GL L+T +Q +A HLD Q LE++L A+ L + A Q P
Sbjct 534 HGAVRAAKGLLLSTEEQLRAGAGHLDRGVVVQVLEAALKLARELGDYAGEHQGVGHDAAP 593
Query 675 LEVLDNLKQFLKQIEQQDQNKAAAFKQALMILSAPSSIAMSSNQDIHLSADGQLSQHAGE 734
+ L + L + K+ K A+ LS P+ IA ++ + L+A + A +
Sbjct 594 QQTLQEAVRDLGHGANDESGKSNGGKPAI-ALSGPAGIAAATPASLTLAAGEHVDSVARQ 652
Query 735 SLSFSTQKSLIAHASDKISLFAAQQGARLYAGKGKIELQAQGDGADLIARKDIQIISTED 794
+ + + ++ +A I LFA R +G + LQAQ + L A + +++ +++
Sbjct 653 NQQVTAGQKVVINAGSDIGLFAQGGELRQITHQGPMLLQAQKNDIRLEAEQSVEVSASQQ 712
Query 795 VINISAQKRILITAKTSQVEINEQGIILRTGGKAEFKAGQHVFMG 839
+ ++A++ I + + + + I L G KA +H +G
Sbjct 713 HVLVTAKEHITLMCGGAYLTLKGGNIELGMPGNFVVKAAKHSHVG 757
Score = 36.2 bits (82), Expect = 7e-05
Identities = 31/103 (30%), Positives = 47/103 (46%), Gaps = 11/103 (11%)
Query 92 GIITAATQGQSDGALTLYTLTLQDPTALWHKRRNSRVFMNKSVRDISEILFKEWQNKSPL 151
GI++ TQG S T Y L L+ A N R+F KSV +I + L KE +
Sbjct 73 GIVSHFTQGSSGFRRTRYELLLEPQLARLELCCNWRIFQEKSVPEILQALLKEHR----- 127
Query 152 FAASLTLD-TSGLSRDYDIRPFSMQANETDYDYLTRLWRSEGI 193
LD + ++ R + +QA ++D+ RL EG+
Sbjct 128 -----VLDYEQRIYHEHLPREYCVQAGDSDHYLHDRLAFEEGL 165
Score = 21.6 bits (44), Expect = 2.1
Identities = 15/47 (32%), Positives = 21/47 (45%), Gaps = 1/47 (2%)
Query 554 LSGIRSEEIQGSGYNQLRFDDTTGQISSQLHSSHGATQLN-LGNLSH 599
L I E I+G G D+ G++ Q H + Q+ LG SH
Sbjct 788 LPNIAVEVIRGDGGVVKLMTDSQGRLPKQQHLAMDPVQIRILGKGSH 834
>Q9I6M7 Type VI secretion system spike protein VgrG2b [Pseudomonas
aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116
/ JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)]
Length=1019
Score = 227 bits (578), Expect = 4e-65
Identities = 143/420 (34%), Positives = 225/420 (54%), Gaps = 25/420 (6%)
Query 440 PQRAKVVGPEGEQVHVDEWGRIKVRFLFTRSEDHSHDGGAGSNDNDTDSAWVDVLTPWAG 499
PQ A VVGP GE++H DEWGR+KV+F + R H ++ + W+ V WAG
Sbjct 370 PQIATVVGPAGEEIHCDEWGRVKVQFPWDREGRH----------DEFSTCWIRVAQNWAG 419
Query 500 EGYGARFLPRIGEIVVIDYFDGDIDRPFVLGRIHEAERSPTKFDIKGQLPHTRHLSGIRS 559
+G +PRIG+ V++DY DGD D+P V GR + A P LP + LS I+S
Sbjct 420 ADWGHMAIPRIGQEVIVDYLDGDCDQPIVTGRTYRATNRPPY-----ALPDHKILSTIKS 474
Query 560 EEIQGSGYNQLRFDDTTGQISSQLHSSHGATQLNLGNLSHPKEQLESEGRGEGFELRTDQ 619
+E +GS N+LR DDTT QIS+ L S HGA+ L+LG L+HP+ + + RGEGFELRTD+
Sbjct 475 KEYKGSRANELRIDDTTAQISAALMSDHGASALHLGYLTHPRPE-GGKPRGEGFELRTDE 533
Query 620 WGAVRAGEGLHLTTHKQEQAQGQHLDAKEASQQLESSLNNAKALSEVAKNQQ-----TDP 674
GAVRA +GL L+T +Q +A HLD Q LE++L A+ L + A Q P
Sbjct 534 HGAVRAAKGLLLSTEEQLRAGAGHLDRGVVVQVLEAALELARELGDYAGEHQGVGHDAAP 593
Query 675 LEVLDNLKQFLKQIEQQDQNKAAAFKQALMILSAPSSIAMSSNQDIHLSADGQLSQHAGE 734
+ L + L + K+ K A+ LS P+ IA ++ + L+A + A +
Sbjct 594 QQTLQEAVRDLGHGANDESGKSNGGKPAI-ALSGPAGIAAATPASLTLAAGEHVDSVARQ 652
Query 735 SLSFSTQKSLIAHASDKISLFAAQQGARLYAGKGKIELQAQGDGADLIARKDIQIISTED 794
+ + + ++ +A I LFA R +G + LQAQ + L A++ +++ +++
Sbjct 653 NQQVTAGQKVVINAGSDIGLFAQGGELRQITHQGPMLLQAQKNDIRLEAKQSVEVSASQQ 712
Query 795 VINISAQKRILITAKTSQVEINEQGIILRTGGKAEFKAGQHVFMGGQNINETILDLPELK 854
+ ++A++ I + + + + I L G KA +H +G ++ +LP+ +
Sbjct 713 HVLVTAKEHITLMCGGAYLTLKGGNIELGMPGNFVVKAAKHSHVGAASLE---AELPQFE 769
Score = 36.2 bits (82), Expect = 7e-05
Identities = 31/103 (30%), Positives = 47/103 (46%), Gaps = 11/103 (11%)
Query 92 GIITAATQGQSDGALTLYTLTLQDPTALWHKRRNSRVFMNKSVRDISEILFKEWQNKSPL 151
GI++ TQG S T Y L L+ A N R+F KSV +I + L KE +
Sbjct 73 GIVSHFTQGSSGFRRTRYELLLEPQLARLELCCNWRIFQEKSVPEILQALLKEHR----- 127
Query 152 FAASLTLD-TSGLSRDYDIRPFSMQANETDYDYLTRLWRSEGI 193
LD + ++ R + +QA ++D+ RL EG+
Sbjct 128 -----VLDYEQRIYHEHLPREYCVQAGDSDHYLHDRLAFEEGL 165
>Q9I737 Type VI secretion system spike protein VgrG1b [Pseudomonas
aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116
/ JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)]
Length=741
Score = 159 bits (403), Expect = 1e-43
Identities = 190/844 (23%), Positives = 345/844 (41%), Gaps = 122/844 (14%)
Query 16 LGLSAQQRALHLTLSDVSLNSQVY-LQRIQGQQHLNQGSSAELICFSSYAHLPLKQFIGC 74
+ L+ Q R + + D L ++V LQR++G++ L + + EL S LPL +G
Sbjct 1 MALAQQTRLVRV---DSPLGAEVLQLQRMEGREELGRPFAYELELISENPDLPLDGLLGK 57
Query 75 QAAVDQVTDTGQLFRSSGIITAATQGQSDGALTLYTLTLQDPTALWHKRRNSRVFMNKSV 134
A++ G GI+ A +QG +G Y +TL+ L + + R+F N+ V
Sbjct 58 PASLALELHDGSRRHFHGIVAACSQGSGNGQFASYQVTLRPWLWLLTRTSDCRIFQNQKV 117
Query 135 RDISEILFKEWQNKSPLFAASLTLDTSGLSRDYDIRPFSMQANETDYDYLTRLWRSEGIN 194
DI + +F++ + LSR Y + +Q ET +D+++RL EGI
Sbjct 118 PDIIKQVFRD---------LGFSDFEDALSRSYREWEYCVQYRETSFDFVSRLMEQEGIY 168
Query 195 WLIDEAQLIVPSITSPIQPQILRLIDDNTAYQPLPRTSL--RYQRSSATEPFDSITQFTA 252
+ Q IL L D A+Q P + Y + D +
Sbjct 169 YWFRHEQ----------SRHILVLSDAYGAHQSPPNYASVPYYPPTLEQRERDHFYDWHM 218
Query 253 TRSLQPTSVYLQRWQADALQQQEGSGSVQSTQHHSQHYDNASLNLEDAWQISPAWTQDLN 312
R +Q S+ L + Q ++ + ++ + A L D + Q +
Sbjct 219 AREVQSGSLSLNDYDF-----QRPGARLEVRSNIARSHAAADYPLYD---YPGEYVQSQD 270
Query 313 GEDQVTASSNTQIEQLNQQINAYHHLQSKQFTATGSVRDAQVGYWFQLDGHPELDQHSNE 372
GE + T+IE L + Y ++ + G R G+ F+L G+P DQ+
Sbjct 271 GEQY----ARTRIEALQAR---YERVRLR-----GRARGLGSGHLFKLSGYPREDQN--- 315
Query 373 ERQLLIISKYYHNQNNLPKELAQQIQHLLPQQPNSKEQRHSTELTLVRRNIKTVPEYHPQ 432
R+ L++ Y + +Q L + +EL + Y P
Sbjct 316 -REYLVVGAEY-----------RVVQELYETGGGGVGAQFESELDCIDAG----QAYRPL 359
Query 433 QHQPQT---HPQRAKVVGPEGEQVHVDEWGRIKVRFLFTRSEDHSHDGGAGSNDNDTDSA 489
P PQ A VVGP+GE++ D++GR+KV F + R HD N+ S
Sbjct 360 PTTPLPIVRGPQTAVVVGPKGEEIWTDQYGRVKVHFHWDR-----HD-----QSNENSSC 409
Query 490 WVDVLTPWAGEGYGARFLPRIGEIVVIDYFDGDIDRPFVLGRIHEAERSPTKFDIKGQLP 549
W+ V WAG+ +G+ +PRIG+ V++ + +GD DRP + GR++ AE++ + +LP
Sbjct 410 WIRVSQAWAGKNWGSMQIPRIGQEVIVSFLEGDPDRPIITGRVYNAEQT-----VPYELP 464
Query 550 HTRHLSGIRSEEIQG---SGYNQLRFDDTTGQISSQLHSSHGATQLNLGNLSHPKEQLES 606
SG++S +G + +N++R +D G +H + + +E
Sbjct 465 ANATQSGMKSRSSKGGTPANFNEIRMEDKKGAEQLFIH-------------AEKNQDIEV 511
Query 607 EGRGEGFELRTDQWGAVRAGEGLHLTTHKQEQAQGQHLDAKEASQQLESSLNNAKALSEV 666
E E + D+ + E +H+ H + + + + E NN K +
Sbjct 512 E-NDETHWVGHDRTKTIDHDETVHV-KHDRTETVDNNETITIGVDRTEKVGNNEKI--SI 567
Query 667 AKNQQTDPLEVLDNLKQFLKQIEQQDQNKAAAFKQALMILSAPSSIAMSSNQDIHLSADG 726
N +T+ + + + + + E+ N+ + + A + + +++ I + A+
Sbjct 568 GAN-RTEDVGSNETISIGVDRTEKVGSNEKIS-------IGANRTEDVGNDETISIGANR 619
Query 727 QLSQHAGESLSFSTQKSLIAHASDKISLFAAQQGARLYAGKGKIELQAQGDGADLIARKD 786
S E++S +S A++ I + G GK E ++ G G D KD
Sbjct 620 SESVGNNETISIGADRSESVGANETIDI-----GGNQSTSIGKNESRSVGQGRDTSVGKD 674
Query 787 IQI-------ISTEDVINISAQKRILITAKTSQVEINEQGIILRTGGKAEFKAGQHVFMG 839
+ ++ D I + + K + I+ + I + G KA ++V +
Sbjct 675 DSLDVGKSFTLNAGDSITLVTGAASIRMKKDGSIVISGKNITIDGSGAINVKADKNVVVK 734
Query 840 GQNI 843
G+ I
Sbjct 735 GRKI 738
>Q9I741 Type VI secretion system spike protein VgrG1a [Pseudomonas
aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116
/ JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)]
Length=643
Score = 151 bits (382), Expect = 3e-41
Identities = 150/613 (24%), Positives = 263/613 (43%), Gaps = 79/613 (13%)
Query 40 LQRIQGQQHLNQGSSAELICFSSYAHLPLKQFIGCQAAVDQVTDTGQLFRSSGIITAATQ 99
LQR++G++ L + + EL S +LPL+Q +G ++ G GI+ +Q
Sbjct 20 LQRMEGREELGRLFAYELHLVSENPNLPLEQLLGKPMSLSLELPGGSRRFFHGIVARCSQ 79
Query 100 GQSDGALTLYTLTLQDPTALWHKRRNSRVFMNKSVRDISEILFKEWQNKSPLFAASLTLD 159
G Y TL+ L + + R+F N+SV +I + +F+ +
Sbjct 80 VAGHGQFAGYQATLRPWPWLLTRTSDCRIFQNQSVPEIIKQVFRN---------LGFSDF 130
Query 160 TSGLSRDYDIRPFSMQANETDYDYLTRLWRSEGINWLIDEAQLIVPSITSPIQPQILRLI 219
L+R Y + +Q ET +D+++RL EGI + Q + IL L
Sbjct 131 EDALTRPYREWEYCVQYRETSFDFISRLMEQEGIYYWFRHEQ----------KRHILVLS 180
Query 220 DDNTAYQ-PLPRTSLRYQRSS-ATEPFDSITQFTATRSLQPTSVYLQRWQADALQQQEGS 277
D A++ P S+ Y + D + R +QP S+ L + Q
Sbjct 181 DAYGAHRSPGGYASVPYYPPTLGHRERDHFFDWQMAREVQPGSLTLNDYDF-----QRPG 235
Query 278 GSVQSTQHHSQHYDNASLNLEDAWQISPAWTQDLNGEDQVTASSNTQIEQLNQQINAYHH 337
++ + ++ + A L D + Q +GE + +IE + Q
Sbjct 236 ARLEVRSNIARPHAAADYPLYD---YPGEYVQSQDGEQY----ARNRIEAIQAQ------ 282
Query 338 LQSKQFTATGSVRDAQVGYWFQLDGHPELDQHSNEERQLLIISKYYHNQNNLPKELAQQI 397
++ G VR G+ F+L G+P DQ+ R+ L++ Y + +
Sbjct 283 --HERVRLRGVVRGIGAGHLFRLSGYPRDDQN----REYLVVGAEY-----------RVV 325
Query 398 QHLLPQQPNSKEQRHSTELTLVRRNIKTVPEYHPQQHQPQTH-PQRAKVVGPEGEQVHVD 456
Q L + +EL + + PQ P PQ A VVGP+GE++ D
Sbjct 326 QELYETGSGGAGSQFESELDCIDASQSF--RLLPQTPVPVVRGPQTAVVVGPKGEEIWTD 383
Query 457 EWGRIKVRFLFTRSEDHSHDGGAGSNDNDTDSAWVDVLTPWAGEGYGARFLPRIGEIVVI 516
++GR+KV F + R HD N+ S W+ V WAG+ +G+ +PRIG+ V++
Sbjct 384 QYGRVKVHFHWDR-----HD-----QSNENSSCWIRVSQAWAGKNWGSMQIPRIGQEVIV 433
Query 517 DYFDGDIDRPFVLGRIHEAERSPTKFDIKGQLPHTRHLSGIRSEEIQG---SGYNQLRFD 573
+ +GD DRP + GR++ AE++ + +LP SG++S +G + +N++R +
Sbjct 434 SFLEGDPDRPIITGRVYNAEQT-----VPYELPANATQSGMKSRSSKGGTPANFNEIRME 488
Query 574 DTTGQISSQLHSSHGATQL--NLGNLSHPKEQLESEGRGEGFELRTDQWGAVRAGEGLHL 631
D G +H+ L N +LS ++ +S G E + ++ AV+ + L +
Sbjct 489 DKKGAEQLYIHAERNQDNLVENDASLSVGHDRNKSIGHDELARIGNNRTRAVKLNDTLLV 548
Query 632 TTHKQEQAQGQHL 644
K + G +L
Sbjct 549 GGAKSDSVTGTYL 561
>Q9I0F3 Type VI secretion system spike protein VgrG1c [Pseudomonas
aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116
/ JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)]
Length=726
Score = 146 bits (369), Expect = 2e-39
Identities = 147/574 (26%), Positives = 242/574 (42%), Gaps = 81/574 (14%)
Query 19 SAQQRALHLTLSDVSLNSQVY-LQRIQGQQHLNQGSSAELICFSSYAHLPLKQFIGCQAA 77
S R +H+ D L +V LQR++G++ L + S EL SS LPL +G +
Sbjct 41 SQHTRLVHV---DSPLGPEVLQLQRLEGREELGRLFSHELELVSSNPALPLDALLGKPMS 97
Query 78 VDQVTDTGQLFRSSGIITAATQGQSDGALTLYTLTLQDPTALWHKRRNSRVFMNKSVRDI 137
+ G GI+ +QG G Y +TL+ L + + R+F N+ V DI
Sbjct 98 LALELPGGSRRYFHGIVARCSQGAGAGQFASYQVTLRPWLWLLTRTSDCRIFQNQKVPDI 157
Query 138 SEILFKEWQNKSPLFAASLTLDTSGLSRDYDIRPFSMQANETDYDYLTRLWRSEGINWLI 197
+ +F++ + LSR Y + +Q ET +D+++RL EGI +
Sbjct 158 IKQVFRD---------LGFSDFEDALSRSYREWEYCVQYRETSFDFVSRLMEQEGIYYWF 208
Query 198 DEAQLIVPSITSPIQPQILRLIDDNTAYQ-PLPRTSLRYQRSS-ATEPFDSITQFTATRS 255
+ + IL L D A+ P TS+ Y S D + R
Sbjct 209 RHEK----------KRHILVLSDAYGAHHSPAGYTSVPYYPPSLGHRERDHFFDWHMARE 258
Query 256 LQPTSVYLQRWQADALQQQEGSGSVQSTQHHSQHYDNASLNLEDAWQISPAWTQDLNGED 315
+QP S+ L + + S H + Y + + Q +GE
Sbjct 259 VQPGSLSLNDYDFQRPGTRLEVRSNVGRAHAAADYP--------LYDYPGEYVQSQDGEH 310
Query 316 QVTASSNTQIEQLNQQINAYHHLQSKQFTATGSVRDAQVGYWFQLDGHPELDQHSNEERQ 375
+ T+IE + Q Y ++ + G R G+ F L +P LDQ+ R+
Sbjct 311 Y----ARTRIEAIQTQ---YERVRLR-----GCARGIGAGHLFHLSNYPRLDQN----RE 354
Query 376 LLIISKYYHNQNNLPKELAQQIQHLLPQQPNSKEQRHSTELTLVRRNIKTVPEYHPQQHQ 435
L++ Y + +Q L + +EL + P P
Sbjct 355 YLVVGAEY-----------RVVQELYETGNGGGGAQFESELDCIDAGQAFRPL--PSTPV 401
Query 436 PQTH-PQRAKVVGPEGEQVHVDEWGRIKVRFLFTRSEDHSHDGGAGSNDNDTDSAWVDVL 494
P PQ A VVGP+GE++ D++GR+KV F + R HD N+ S W+ V
Sbjct 402 PVVRGPQTAVVVGPKGEEIWTDQYGRVKVHFHWDR-----HD-----QSNENSSCWMRVS 451
Query 495 TPWAGEGYGARFLPRIGEIVVIDYFDGDIDRPFVLGRIHEAERSPTKFDIKGQLPHTRHL 554
WAG+ +G+ +PRIG+ V++ + +GD DRP + GR++ AE++ + +LP
Sbjct 452 QAWAGKNWGSIQIPRIGQEVIVSFLEGDPDRPIITGRVYNAEQT-----VPYELPANATQ 506
Query 555 SGIRSEEIQG---SGYNQLRFDDTTGQISSQLHS 585
SG +S +G + +N++R +D G +H+
Sbjct 507 SGTKSRSSKGGTPANFNEIRMEDKKGAEQLFIHA 540
>Q9KNE7 Type VI secretion system spike protein VgrG2 [Vibrio cholerae
serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)]
Length=694
Score = 143 bits (360), Expect = 2e-38
Identities = 143/535 (27%), Positives = 219/535 (41%), Gaps = 89/535 (17%)
Query 61 SSYAHLPLKQFIGCQAAVDQVTDTGQLFRSSGIITAATQGQSDGALTLYTLTLQDPTALW 120
S ++L Q + +A + ++ + R GI+ A +QG T Y LTL
Sbjct 50 SRVSNLTADQMVDKRAELKLYRNSQLVQRVHGIVRAFSQGDIGHHHTFYQLTLVPALERL 109
Query 121 HKRRNSRVFMNKSVRDISEILFKEWQNKSPLFAASLTLDTSGLSRDYDIRPFSMQANETD 180
R NSR+F ++V +I IL +E FA L RD R F +Q E+D
Sbjct 110 SLRHNSRIFQKQTVPEILSILLQEMGIHDYAFA---------LKRDCVQREFCVQYRESD 160
Query 181 YDYLTRLWRSEGINW-LIDEA--QLIVPSITSPIQPQILRLIDDNTAYQPLPRTSLRYQR 237
D+L RL EG+ + + EA + S S ++ I N T +
Sbjct 161 IDFLHRLAAEEGLVYSFVHEAGKHTLYFSDASDSLSKLPEPIPYNALAGGTMDTPYIHGL 220
Query 238 SSATEPFDSITQFTATRSLQPTSVYLQRWQADALQQQEGSGSVQSTQHHSQHYDNASLNL 297
+ T+ S Q +P +LQ Q L Q Q QH+D
Sbjct 221 TYRTQAEVSEVQLKDYSFKKPAYSFLQTVQGTELDYQ---------QTRYQHFDAPG--- 268
Query 298 EDAWQISPAWTQDLNGEDQVTASSNTQIEQLNQQINAYHHLQSKQFTATGSVRDA--QVG 355
+ D+NG A S +++ L + + TATG + + G
Sbjct 269 --------RYKDDVNG----AAFSQIRLDYLRRHAH----------TATGQSNEPLLRAG 306
Query 356 YWFQLDGHPELDQHSNEERQLLIISKYYHNQNNLPKELAQQIQHLLPQQPNSKEQRHSTE 415
Y F L H LD N R +++S + + QP + ++ +
Sbjct 307 YKFDLQEH--LDPAMN--RDWVVVSINHQGE-----------------QPQALQEEGGSG 345
Query 416 LTLVRRNIKTVPEYHPQQHQPQTHPQR-----AKVVGPEGEQVHVDEWGRIKVRFLFTRS 470
T +P + + +PQ PQ A VVGPEGE++ DE GR+K+ F + R
Sbjct 346 ATTYNNQFSLIPGHLHWRAEPQPKPQVDGPMIATVVGPEGEEIFCDEHGRVKIHFPWDRY 405
Query 471 EDHSHDGGAGSNDNDTDSAWVDVLTPWAGEGYGARFLPRIGEIVVIDYFDGDIDRPFVLG 530
SN N+ S WV V WAG YG +PRIG V++ + +GD D+P + G
Sbjct 406 ----------SNGNEQSSCWVRVSQGWAGSQYGFIAIPRIGHEVIVSFLNGDPDQPIITG 455
Query 531 RIHEAERSPTKFDIKGQLPHTRHLSGIRSEEIQGSGYNQLRFDDTTGQISSQLHS 585
R + A +P LP + + +R+E QG G+N+L F+D G+ LH+
Sbjct 456 RTYHATNTPPY-----TLPEHKTKTVLRTETHQGEGFNELSFEDQAGKEQIYLHA 505
>A0A0H3AIG7 Actin cross-linking toxin VgrG1 [Vibrio cholerae serotype
O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)]
Length=1095
Score = 144 bits (362), Expect = 4e-38
Identities = 145/544 (27%), Positives = 224/544 (41%), Gaps = 89/544 (16%)
Query 52 GSSAELICFSSYAHLPLKQFIGCQAAVDQVTDTGQLFRSSGIITAATQGQSDGALTLYTL 111
G E+ S ++L +Q + +A + ++ + R GI+ A +QG T Y L
Sbjct 41 GFRYEVQLASRVSNLTAEQMVDKRAELKLYRNSQLVQRVHGIVRAFSQGDIGHHHTFYQL 100
Query 112 TLQDPTALWHKRRNSRVFMNKSVRDISEILFKEWQNKSPLFAASLTLDTSGLSRDYDIRP 171
TL R NSR+F ++V +I IL +E FA L RD R
Sbjct 101 TLVPALERLSLRHNSRIFQKQTVPEILSILLQEMGINDYAFA---------LKRDGVQRE 151
Query 172 FSMQANETDYDYLTRLWRSEGINW-LIDEA--QLIVPSITSPIQPQILRLIDDNTAYQPL 228
F +Q E+D D+L RL EG+ + + EA + S S ++ I N
Sbjct 152 FCVQYRESDIDFLHRLAAEEGLVYSFVHEAGKHTLYFSDASDSLSKLPEPIPYNALVGGA 211
Query 229 PRTSLRYQRSSATEPFDSITQFTATRSLQPTSVYLQRWQADALQQQEGSGSVQSTQHHSQ 288
T + + T+ S Q +P +LQ Q L Q Q Q
Sbjct 212 IDTPYIHGLTYRTQAEVSEVQLKDYSFKKPAYSFLQTVQGTELDYQ---------QTRYQ 262
Query 289 HYDNASLNLEDAWQISPAWTQDLNGEDQVTASSNTQIEQLNQQINAYHHLQSKQFTATGS 348
H+D + D+NG A S +++ L + + TATG
Sbjct 263 HFDAPG-----------RYKDDVNG----AAFSQIRLDYLRRHAH----------TATGQ 297
Query 349 VRDA--QVGYWFQLDGHPELDQHSNEERQLLIISKYYHNQNNLPKELAQQIQHLLPQQPN 406
+ + GY F L H LD N R +++S + + QP
Sbjct 298 SNEPLLRAGYKFDLQEH--LDPAMN--RDWVVVSINHQGE-----------------QPQ 336
Query 407 SKEQRHSTELTLVRRNIKTVPEYHPQQHQPQTHPQR-----AKVVGPEGEQVHVDEWGRI 461
+ ++ + T +P + + +PQ PQ A VVGPEGE++ DE GR+
Sbjct 337 ALQEDGGSGATTYSNQFSLIPGHLHWRAEPQPKPQVDGPMIATVVGPEGEEIFCDEHGRV 396
Query 462 KVRFLFTRSEDHSHDGGAGSNDNDTDSAWVDVLTPWAGEGYGARFLPRIGEIVVIDYFDG 521
K+ F + R SN N+ S WV V WAG YG +PRIG V++++ +G
Sbjct 397 KIHFPWDRY----------SNGNEQSSCWVRVSQGWAGSQYGFIAIPRIGHEVIVEFLNG 446
Query 522 DIDRPFVLGRIHEAERSPTKFDIKGQLPHTRHLSGIRSEEIQGSGYNQLRFDDTTGQISS 581
D D+P + GR + A +P LP + + +R+E QG G+N+L F+D G+
Sbjct 447 DPDQPIITGRTYHATNTPPY-----TLPEHKTKTVLRTETHQGEGFNELSFEDQAGKEQI 501
Query 582 QLHS 585
LH+
Sbjct 502 YLHA 505
>Q9KS45 Actin cross-linking toxin VgrG1 [Vibrio cholerae serotype
O1 (strain ATCC 39315 / El Tor Inaba N16961)]
Length=1163
Score = 144 bits (362), Expect = 4e-38
Identities = 145/544 (27%), Positives = 224/544 (41%), Gaps = 89/544 (16%)
Query 52 GSSAELICFSSYAHLPLKQFIGCQAAVDQVTDTGQLFRSSGIITAATQGQSDGALTLYTL 111
G E+ S ++L +Q + +A + ++ + R GI+ A +QG T Y L
Sbjct 41 GFRYEVQLASRVSNLTAEQMVDKRAELKLYRNSQLVQRVHGIVRAFSQGDIGHHHTFYQL 100
Query 112 TLQDPTALWHKRRNSRVFMNKSVRDISEILFKEWQNKSPLFAASLTLDTSGLSRDYDIRP 171
TL R NSR+F ++V +I IL +E FA L RD R
Sbjct 101 TLVPALERLSLRHNSRIFQKQTVPEILSILLQEMGINDYAFA---------LKRDGVQRE 151
Query 172 FSMQANETDYDYLTRLWRSEGINW-LIDEA--QLIVPSITSPIQPQILRLIDDNTAYQPL 228
F +Q E+D D+L RL EG+ + + EA + S S ++ I N
Sbjct 152 FCVQYRESDIDFLHRLAAEEGLVYSFVHEAGKHTLYFSDASDSLSKLPEPIPYNALVGGA 211
Query 229 PRTSLRYQRSSATEPFDSITQFTATRSLQPTSVYLQRWQADALQQQEGSGSVQSTQHHSQ 288
T + + T+ S Q +P +LQ Q L Q Q Q
Sbjct 212 IDTPYIHGLTYRTQAEVSEVQLKDYSFKKPAYSFLQTVQGTELDYQ---------QTRYQ 262
Query 289 HYDNASLNLEDAWQISPAWTQDLNGEDQVTASSNTQIEQLNQQINAYHHLQSKQFTATGS 348
H+D + D+NG A S +++ L + + TATG
Sbjct 263 HFDAPG-----------RYKDDVNG----AAFSQIRLDYLRRHAH----------TATGQ 297
Query 349 VRDA--QVGYWFQLDGHPELDQHSNEERQLLIISKYYHNQNNLPKELAQQIQHLLPQQPN 406
+ + GY F L H LD N R +++S + + QP
Sbjct 298 SNEPLLRAGYKFDLQEH--LDPAMN--RDWVVVSINHQGE-----------------QPQ 336
Query 407 SKEQRHSTELTLVRRNIKTVPEYHPQQHQPQTHPQR-----AKVVGPEGEQVHVDEWGRI 461
+ ++ + T +P + + +PQ PQ A VVGPEGE++ DE GR+
Sbjct 337 ALQEDGGSGATTYSNQFSLIPGHLHWRAEPQPKPQVDGPMIATVVGPEGEEIFCDEHGRV 396
Query 462 KVRFLFTRSEDHSHDGGAGSNDNDTDSAWVDVLTPWAGEGYGARFLPRIGEIVVIDYFDG 521
K+ F + R SN N+ S WV V WAG YG +PRIG V++++ +G
Sbjct 397 KIHFPWDRY----------SNGNEQSSCWVRVSQGWAGSQYGFIAIPRIGHEVIVEFLNG 446
Query 522 DIDRPFVLGRIHEAERSPTKFDIKGQLPHTRHLSGIRSEEIQGSGYNQLRFDDTTGQISS 581
D D+P + GR + A +P LP + + +R+E QG G+N+L F+D G+
Sbjct 447 DPDQPIITGRTYHATNTPPY-----TLPEHKTKTVLRTETHQGEGFNELSFEDQAGKEQI 501
Query 582 QLHS 585
LH+
Sbjct 502 YLHA 505
Score = 23.9 bits (50), Expect = 0.43
Identities = 29/110 (26%), Positives = 45/110 (41%), Gaps = 12/110 (11%)
Query 597 LSHPKEQLESEGRGEGFELRTDQW---GAVRAGEGLHLTT--HKQEQAQGQHLDAKEASQ 651
+ H K QL+S E Q+ G AG G++ T K + +
Sbjct 1014 MKHIKPQLQSR-YSESLSKNVFQYFQDGGEVAGHGINNATVGDKHSPELAILFEFRTVPN 1072
Query 652 QLESSLNNAKAL--SEVAKNQQTDPLEVLDNLKQFLKQIEQQDQNKAAAF 699
+L+S L ++ SEV Q DP++ K ++Q+E QN AF
Sbjct 1073 ELQSYLPKTESTTKSEVKLLDQFDPMK----RKTVIQQVESLVQNSGDAF 1118
>Q9KN42 Type VI secretion system spike protein VgrG3 [Vibrio cholerae
serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)]
Length=1017
Score = 140 bits (353), Expect = 4e-37
Identities = 137/535 (26%), Positives = 228/535 (43%), Gaps = 89/535 (17%)
Query 61 SSYAHLPLKQFIGCQAAVDQVTDTGQLFRSSGIITAATQGQSDGALTLYTLTLQDPTALW 120
S+ ++L +QF+ A + + D + + +GI+ ++G + T Y+LTL
Sbjct 50 SALSNLTAEQFVDQTAHLTILRDGQVVQQINGIVRQLSKGDTGHRHTFYSLTLVPALERL 109
Query 121 HKRRNSRVFMNKSVRDISEILFKEWQNKSPLFAASLTLDTSGLSRDYDIRPFSMQANETD 180
R NSR+F +SV +I IL +E + FA L R+ R F +Q ETD
Sbjct 110 SLRSNSRIFQQQSVPEIISILLQEMGIEDYAFA---------LKRECAQREFCVQYRETD 160
Query 181 YDYLTRLWRSEGINWL-IDEAQ--LIVPSITSPIQPQILRLIDDNTAYQPLPRTSLRYQR 237
+L R+ EG+ + + EAQ ++ + +S QP++ + P+P +L
Sbjct 161 LQFLHRIAAEEGLVYSHLHEAQKHTLLFTDSSDSQPKLAK---------PVPYNAL--AG 209
Query 238 SSATEPFDSITQFTATRSLQPTSV--YLQRWQADALQQQEGSGSVQSTQHHSQHYDNASL 295
P+ QF T + T + Y + A Q+ + Q + +H+D
Sbjct 210 GEINLPYVVDLQFKTTAQVSHTELKDYSFKKPAYGFTQRTQGKDIAYQQPNYEHFDAPGR 269
Query 296 NLEDAWQISPAWTQDLNGEDQVTASSNTQIEQLNQQINAYHHLQSKQFTATGSVRDAQVG 355
+DA NG+ A S ++E L + +S + VR
Sbjct 270 YKDDA-----------NGK----AFSQIRLEYLRRDA-LLADAKSDEPLLLAGVR----- 308
Query 356 YWFQLDGHPELDQHSNEERQLLIISKYYHNQNNLPKELAQQIQHLLPQQPNSKEQRHSTE 415
F L H LD N R L++ + QP + ++ +
Sbjct 309 --FDLQDH--LDHAMN--RDWLVVQANHQG-----------------TQPQALQEEGGSG 345
Query 416 LTLVRRNIKTVPEYHPQQHQPQTHPQ-----RAKVVGPEGEQVHVDEWGRIKVRFLFTRS 470
T +K +P + + +P PQ A VVGP+GE+++ D +GR+KV F + R
Sbjct 346 ATTYSNQLKLIPAHITWRARPCAKPQVDGPMIATVVGPQGEEIYCDNFGRVKVHFPWDRY 405
Query 471 EDHSHDGGAGSNDNDTDSAWVDVLTPWAGEGYGARFLPRIGEIVVIDYFDGDIDRPFVLG 530
S+ N+ S WV V WAG YG+ +PR+G V++ + +GD D+P + G
Sbjct 406 ----------SSSNEKSSCWVRVAQEWAGSQYGSMAIPRVGHEVIVSFLNGDPDQPIITG 455
Query 531 RIHEAERSPTKFDIKGQLPHTRHLSGIRSEEIQGSGYNQLRFDDTTGQISSQLHS 585
R + A + LP + + +R+E QG GYN+L F+D G LH+
Sbjct 456 RTYHATNTAPY-----ALPDHKTKTVLRTETHQGQGYNELSFEDQAGSEQILLHA 505
Score = 20.4 bits (41), Expect = 4.9
Identities = 19/87 (22%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Query 200 AQLIVPSITSPIQPQILRLIDDNTAYQPLPRTSLRYQRSSATEPFDSITQFTATRSLQPT 259
A+L+ P I + +Q R+ID + +P ++ + + + L+P+
Sbjct 652 AELVQPDIAASMQSGAARVIDVASLPTMMPSSANNTANDEPVAEEKTPERILKSDLLKPS 711
Query 260 SVY--LQRWQADALQQQEGSGSVQSTQ 284
L + QA A +Q S V+ Q
Sbjct 712 DELEKLAKRQASAYRQGNHSDEVKLLQ 738
>Q0PZH5 Type VI secretion system spike protein VgrG2 [Aeromonas
hydrophila]
Length=681
Score = 125 bits (314), Expect = 1e-32
Identities = 149/584 (26%), Positives = 238/584 (41%), Gaps = 99/584 (17%)
Query 89 RSSGIITAATQGQSDGALTLYTLTLQDPTALWHK--RRNSRVFMNKSVRDISEILFKEWQ 146
R G+++ QG S T Y L +Q ALW R+NSR+F + +I IL +E
Sbjct 72 RVCGVVSDFAQGDSGFRRTRYQLMVQP--ALWRLSLRQNSRIFQAQKPDEILSILLQEHG 129
Query 147 NKSPLFAASLTLDTSGLSRDYDIRPFSMQANETDYDYLTRLWRSEGINWLIDEAQLIVPS 206
FA L ++ R + +Q ET D++ RL EG+ + +
Sbjct 130 ITDYAFA---------LKNEHAKREYCVQYRETGLDFVNRLAAEEGMFYFHE-------- 172
Query 207 ITSPIQPQILRLIDDNTAYQPLPRTSLRY-QRSSATEPFDSITQFTATRSLQPTSVYLQR 265
+ + DD+ A P RS P+ + QF +++P+ V L+
Sbjct 173 --FEVGKHRIVFADDSAALTAGPELFFNLGNRSLEQGPY--VRQFHYREAVRPSDVELKD 228
Query 266 WQ----ADALQQQEGSGSVQSTQHHSQHYDNASLNLEDAWQISPAWTQ---DLNGEDQVT 318
+ A L ++ + + QH+D ED A+ Q D D V
Sbjct 229 YSFKTPAYGLSHKKVGAELTHQRDTYQHFDFPGRYKEDP--SGKAFAQHRLDALRNDAVA 286
Query 319 AS--SNTQIEQLNQQINAYHHLQSKQFTATGSVRDAQVGYWFQLDGHPELDQHSNEERQL 376
S SN+ Q Q + H T VR G Q L++ +
Sbjct 287 GSGKSNSSALQPGQTFSLTEHPNDSLNTDWQIVRIQHTGLQSQA-----LEEEGGSGPTV 341
Query 377 LIISKYYHNQNNLPKELAQQIQHLLPQQPNSKEQRHSTELTLVRRNIKTVPEYHPQQHQP 436
YHN+ + K T R I + PE H+P
Sbjct 342 ------YHNEFGVVKAS-----------------------TTWRARIGS-PE---APHKP 368
Query 437 QTH-PQRAKVVGPEGEQVHVDEWGRIKVRFLFTRSEDHSHDGGAGSNDNDTDSAWVDVLT 495
PQ A VVGPEGE+++ DE GR+K++F + R + ND S WV V
Sbjct 369 MVDGPQIAVVVGPEGEEIYCDEHGRVKLQFPWDRY----------GSSNDQSSCWVRVSQ 418
Query 496 PWAGEGYGARFLPRIGEIVVIDYFDGDIDRPFVLGRIHEAERSPTKFDIKGQLPHTRHLS 555
WAG YG +PRIG V++ + +GD D+P V GR + A P +LP + +
Sbjct 419 GWAGGQYGMMAIPRIGHEVIVSFLEGDPDQPIVTGRTYHATNRPPY-----ELPANKTRT 473
Query 556 GIRSEEIQGSGYNQLRFDDTTGQISSQLHSSHGATQLNLGNLSHPKEQLESEGRGEGFEL 615
+R+E QG G+N+LRF+D G+ + HG LN+ + ++ + + ++
Sbjct 474 VLRTETHQGEGFNELRFEDQAGKEEIYI---HGQKDLNVLIENDAAWHIKHD---QHTDI 527
Query 616 RTDQWGAVRAGEGLHLTTHKQEQAQGQHLDAKEAS--QQLESSL 657
++ ++A + L + K++Q + + +AS Q+L SL
Sbjct 528 DNERVTRIKANDHLTVEGEKRDQIKADYSLTVDASLHQKLGQSL 571
Lambda K H a alpha
0.315 0.130 0.373 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 6569497
Database: 110e52378b50eb80abe16ef879f5225f.SwissProt.fasta
Posted date: May 9, 2024 11:52 PM
Number of letters in database: 8,621
Number of sequences in database: 10
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
