BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 2357cfc76be84f2a28d858ab151806ff.TrEMBL.fasta
4 sequences; 1,449 total letters
Query= ACIAD1795
Length=363
Score E
Sequences producing significant alignments: (Bits) Value
Q6FBD2 DUF6708 domain-containing protein [Acinetobacter baylyi (s... 733 0.0
Q6FBD1 DUF6708 domain-containing protein [Acinetobacter baylyi (s... 578 0.0
N9NP24 DUF6708 domain-containing protein [Acinetobacter vivianii] 568 0.0
N9NPC5 DUF6708 domain-containing protein [Acinetobacter vivianii] 567 0.0
>Q6FBD2 DUF6708 domain-containing protein [Acinetobacter baylyi
(strain ATCC 33305 / BD413 / ADP1)]
Length=362
Score = 733 bits (1892), Expect = 0.0
Identities = 362/362 (100%), Positives = 362/362 (100%), Gaps = 0/362 (0%)
Query 1 MLREDYETKFTTLNQPFEIGTPNKNGRLRLREIDIKSLKTDQLYPHRQVIRFNSTFVEVM 60
MLREDYETKFTTLNQPFEIGTPNKNGRLRLREIDIKSLKTDQLYPHRQVIRFNSTFVEVM
Sbjct 1 MLREDYETKFTTLNQPFEIGTPNKNGRLRLREIDIKSLKTDQLYPHRQVIRFNSTFVEVM 60
Query 61 DSWEFIRGRATALALPMWAALFFAISMFLFAIYSLYFKQVYWSIAIISCLTIGLVYLVYS 120
DSWEFIRGRATALALPMWAALFFAISMFLFAIYSLYFKQVYWSIAIISCLTIGLVYLVYS
Sbjct 61 DSWEFIRGRATALALPMWAALFFAISMFLFAIYSLYFKQVYWSIAIISCLTIGLVYLVYS 120
Query 121 NYKMAKYDLFGYTHYPIRFNQKTQKVYAFSPQQQKMIELNWRDLRFSAVKEGDDIELRAS 180
NYKMAKYDLFGYTHYPIRFNQKTQKVYAFSPQQQKMIELNWRDLRFSAVKEGDDIELRAS
Sbjct 121 NYKMAKYDLFGYTHYPIRFNQKTQKVYAFSPQQQKMIELNWRDLRFSAVKEGDDIELRAS 180
Query 181 LVNADNIVEEEIIFPFLAPRYQPELVDQHLAFFKAYMQGGDLKRIDAAIPEFFDIYNRKE 240
LVNADNIVEEEIIFPFLAPRYQPELVDQHLAFFKAYMQGGDLKRIDAAIPEFFDIYNRKE
Sbjct 181 LVNADNIVEEEIIFPFLAPRYQPELVDQHLAFFKAYMQGGDLKRIDAAIPEFFDIYNRKE 240
Query 241 TFKESFERVYMVNDIVERVQQKRPKERYMLSVSLNIIFWLPTLFLRRLGLLFSKIPEWPT 300
TFKESFERVYMVNDIVERVQQKRPKERYMLSVSLNIIFWLPTLFLRRLGLLFSKIPEWPT
Sbjct 241 TFKESFERVYMVNDIVERVQQKRPKERYMLSVSLNIIFWLPTLFLRRLGLLFSKIPEWPT 300
Query 301 HIEKECRIERNDTYDSTNKQRHLAPLKFSWAQILVIFLSGLILFSLAIVFFIGLAYLSWN 360
HIEKECRIERNDTYDSTNKQRHLAPLKFSWAQILVIFLSGLILFSLAIVFFIGLAYLSWN
Sbjct 301 HIEKECRIERNDTYDSTNKQRHLAPLKFSWAQILVIFLSGLILFSLAIVFFIGLAYLSWN 360
Query 361 YR 362
YR
Sbjct 361 YR 362
>Q6FBD1 DUF6708 domain-containing protein [Acinetobacter baylyi
(strain ATCC 33305 / BD413 / ADP1)]
Length=362
Score = 578 bits (1491), Expect = 0.0
Identities = 292/363 (80%), Positives = 314/363 (87%), Gaps = 2/363 (1%)
Query 1 MLREDYETKFTTLNQPFEIGTPNKNGRLRLREIDIKSLKTDQLYPHRQVIRFNSTFVEVM 60
MLREDYE KFTTLNQPFEIGTPNKNGRLRLREIDIK+LKTDQLYPHRQVIRFNSTFVEVM
Sbjct 1 MLREDYENKFTTLNQPFEIGTPNKNGRLRLREIDIKNLKTDQLYPHRQVIRFNSTFVEVM 60
Query 61 DSWEFIRGRATALALPMWAALFFAISMFLFAIYSLYFKQVYWSIAIISCLTIGLVYLVYS 120
DSWEFIRGRATALALPMWAALFFAISMFLFAIYSLYFKQVYWSIAIISCLTIGLVYLVYS
Sbjct 61 DSWEFIRGRATALALPMWAALFFAISMFLFAIYSLYFKQVYWSIAIISCLTIGLVYLVYS 120
Query 121 NYKMAKYDLFGYTHYPIRFNQKTQKVYAFSPQQQKMIELNWRDLRFSAVKEGD-DIELRA 179
NYKMAKYDLFGYTHYPIRFN+KTQKVYAFSPQQQK+IELNW+DLRFSAV+EG DIELRA
Sbjct 121 NYKMAKYDLFGYTHYPIRFNRKTQKVYAFSPQQQKIIELNWQDLRFSAVQEGRFDIELRA 180
Query 180 SLVNADNIVEEEIIFPFLAPRYQPELVDQHLAFFKAYMQGGDLKRIDAAIPEFFDIYNRK 239
SLVN DNIVEEEIIFPF+ Y ELVD HLAFFKAYMQG DLK IDAAIPEFFD+YNRK
Sbjct 181 SLVNEDNIVEEEIIFPFITKIYGKELVDHHLAFFKAYMQGDDLKSIDAAIPEFFDVYNRK 240
Query 240 ETFKESFERVYMVNDIVERVQQKRPKERYMLSVSLNIIFWLPTLFLRRLGLLFSKIPEWP 299
ETFKESFERVYM D E +QQ RP ER ++ + LRRLG+ FSKIP+WP
Sbjct 241 ETFKESFERVYMQFDGEEIIQQTRPAERDN-GIATVAFPLFSLILLRRLGVYFSKIPQWP 299
Query 300 THIEKECRIERNDTYDSTNKQRHLAPLKFSWAQILVIFLSGLILFSLAIVFFIGLAYLSW 359
THIEKEC+I+ ND YDST KQRHL+PL F+ A+ L++FL + S+ I F GLAYLSW
Sbjct 300 THIEKECQIDSNDPYDSTGKQRHLSPLVFTSAEKLILFLGWFLGTSIFIAFLAGLAYLSW 359
Query 360 NYR 362
NYR
Sbjct 360 NYR 362
>N9NP24 DUF6708 domain-containing protein [Acinetobacter vivianii]
Length=363
Score = 568 bits (1464), Expect = 0.0
Identities = 281/364 (77%), Positives = 316/364 (87%), Gaps = 3/364 (1%)
Query 1 MLREDYETKFTTLNQPFEIGTPNKNGRLRLREIDIKSLKTDQLYPHRQVIRFNSTFVEVM 60
MLREDYETKFTTLNQPFEIG PNKNGRLRLREIDIKSLKT+QLYPHRQVIRFNSTFVEVM
Sbjct 1 MLREDYETKFTTLNQPFEIGIPNKNGRLRLREIDIKSLKTEQLYPHRQVIRFNSTFVEVM 60
Query 61 DSWEFIRGRATALALPMWAALFFAISMFLFAIYSLYFKQVYWSIAIISCLTIGLVYLVYS 120
DSWEFIRGRAT LALPMWAALFFAI MFLFAIYSLYFKQVYWSIAIISCLT+ L YLVY+
Sbjct 61 DSWEFIRGRATGLALPMWAALFFAIFMFLFAIYSLYFKQVYWSIAIISCLTVALCYLVYT 120
Query 121 NYKMAKYDLFGYTHYPIRFNQKTQKVYAFSPQQQKMIELNWRDLRFSAVKEGD-DIELRA 179
NY+MAKYDLFGYTHYPIRFN+KTQKVYAFSPQQQK+IELNWRDLRFSAV+EG DIELRA
Sbjct 121 NYRMAKYDLFGYTHYPIRFNRKTQKVYAFSPQQQKIIELNWRDLRFSAVREGRYDIELRA 180
Query 180 SLVNADNIVEEEIIFPFLAPRYQPELVDQHLAFFKAYMQGGDLKRIDAAIPEFFDIYNRK 239
SLVNADNIVEEEII P+++ + +DQ+LAFFKAYMQG DLK IDAAIPEFFD+YNRK
Sbjct 181 SLVNADNIVEEEIILPYIS-FDNNDFIDQNLAFFKAYMQGDDLKSIDAAIPEFFDVYNRK 239
Query 240 ETFKESFERVYMVNDIV-ERVQQKRPKERYMLSVSLNIIFWLPTLFLRRLGLLFSKIPEW 298
ETFKESFERVYM ND++ E Q RP ++ + VS+ + W T+ +RRLG+ FSKIP+W
Sbjct 240 ETFKESFERVYMSNDVLNELAMQTRPAKKDISGVSMMAVIWSLTILVRRLGIFFSKIPQW 299
Query 299 PTHIEKECRIERNDTYDSTNKQRHLAPLKFSWAQILVIFLSGLILFSLAIVFFIGLAYLS 358
PTHIE+EC+I+ ND YDST KQRHLAPL F+ A+ ++F+ L+ S+ I F GLAYLS
Sbjct 300 PTHIEQECQIDSNDPYDSTGKQRHLAPLVFTSAEKCILFIGWLLGTSIFIAFLAGLAYLS 359
Query 359 WNYR 362
WNYR
Sbjct 360 WNYR 363
>N9NPC5 DUF6708 domain-containing protein [Acinetobacter vivianii]
Length=362
Score = 567 bits (1461), Expect = 0.0
Identities = 285/362 (79%), Positives = 310/362 (86%), Gaps = 2/362 (1%)
Query 1 MLREDYETKFTTLNQPFEIGTPNKNGRLRLREIDIKSLKTDQLYPHRQVIRFNSTFVEVM 60
MLREDYETKFTTLNQPFE+G PNKNGRLRLREIDIKSLK DQLYPHRQVIRFNSTFVEVM
Sbjct 1 MLREDYETKFTTLNQPFEVGIPNKNGRLRLREIDIKSLKMDQLYPHRQVIRFNSTFVEVM 60
Query 61 DSWEFIRGRATALALPMWAALFFAISMFLFAIYSLYFKQVYWSIAIISCLTIGLVYLVYS 120
DSWEFIRGRATALALPMWAALFFAI MFLF +YSLYFKQVYWS+A+ SCLTIGLVYLVYS
Sbjct 61 DSWEFIRGRATALALPMWAALFFAIFMFLFFMYSLYFKQVYWSVAVFSCLTIGLVYLVYS 120
Query 121 NYKMAKYDLFGYTHYPIRFNQKTQKVYAFSPQQQKMIELNWRDLRFSAVKEGD-DIELRA 179
NYKMAKYDLFGYTHYPIRFN+KTQKVYAFSPQQQK+IELNW+DLRFSAV+EG DIELRA
Sbjct 121 NYKMAKYDLFGYTHYPIRFNRKTQKVYAFSPQQQKIIELNWQDLRFSAVQEGRFDIELRA 180
Query 180 SLVNADNIVEEEIIFPFLAPRYQPELVDQHLAFFKAYMQGGDLKRIDAAIPEFFDIYNRK 239
SLVNADNIVEEEIIFPF+ Y ELVDQHLAFFKAYMQG DLK IDAAIPEFFD+YNRK
Sbjct 181 SLVNADNIVEEEIIFPFITKIYGKELVDQHLAFFKAYMQGDDLKSIDAAIPEFFDVYNRK 240
Query 240 ETFKESFERVYMVNDIVERVQQKRPKERYMLSVSLNIIFWLPTLFLRRLGLLFSKIPEWP 299
ETFKESFERVYM D E +QQ RP ER ++ + LRRLG+ FSKIP+WP
Sbjct 241 ETFKESFERVYMQFDGEEIIQQTRPAERDN-GIATVAFPLFSLILLRRLGVYFSKIPQWP 299
Query 300 THIEKECRIERNDTYDSTNKQRHLAPLKFSWAQILVIFLSGLILFSLAIVFFIGLAYLSW 359
THIEK+C+I+ ND YDS KQRHLAPL F+ A+ L++FL L+ + I F GLAYLSW
Sbjct 300 THIEKKCQIDSNDPYDSIGKQRHLAPLVFTSAEKLILFLGCLVGTIIFIAFLAGLAYLSW 359
Query 360 NY 361
NY
Sbjct 360 NY 361
Lambda K H a alpha
0.329 0.142 0.439 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 418932
Database: 2357cfc76be84f2a28d858ab151806ff.TrEMBL.fasta
Posted date: May 20, 2024 6:17 PM
Number of letters in database: 1,449
Number of sequences in database: 4
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
