BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 829bbbe9b0d5e22e30484910880ad5b0.TrEMBL.fasta
22 sequences; 6,134 total letters
Query= ACIAD1838
Length=248
Score E
Sequences producing significant alignments: (Bits) Value
A0A7G2SIP6 AraC family transcriptional regulator [Acinetobacter sp] 476 1e-176
Q6FB92 Putative transcriptional regulator (AraC family) [Acinetob... 476 1e-176
A0A1Q3N6M7 AraC family transcriptional regulator [Acinetobacter s... 453 2e-167
A0A1Q3NBJ7 AraC family transcriptional regulator [Acinetobacter s... 453 2e-167
A0A137YNE1 AraC family transcriptional regulator [Acinetobacter v... 451 2e-166
N8W828 HTH araC/xylS-type domain-containing protein [Acinetobacte... 358 4e-129
A0A6P1LRJ4 AraC family transcriptional regulator [Acinetobacter d... 358 4e-129
N9SCQ6 HTH araC/xylS-type domain-containing protein [Acinetobacte... 355 5e-128
N9K2W8 HTH araC/xylS-type domain-containing protein [Acinetobacte... 350 7e-126
N9Q8F0 HTH araC/xylS-type domain-containing protein [Acinetobacte... 346 2e-124
N8V404 HTH araC/xylS-type domain-containing protein [Acinetobacte... 344 2e-123
A0A0B0KTZ3 Transcriptional regulator, AraC family [Acinetobacter ... 341 2e-122
A8KCK0 HTH AraC-type regulator [Caldimonas brevitalea] 167 1e-53
A0A1Y0B7R6 AraC-family transcriptional regulator [Pseudomonas aer... 165 3e-53
B4XH84 AraC [Actinobacillus pleuropneumoniae] 154 4e-49
E2D2R1 AraC family transcriptional regulator [Escherichia coli] 116 3e-34
B8Y3J6 AraC [Actinobacillus pleuropneumoniae] 84.3 8e-24
J7G0L9 AraC family transcriptional regulator [Paenibacillus sp. 1... 55.8 7e-13
Q8XMB9 Probable transcriptional regulator [Clostridium perfringen... 56.6 9e-13
A0A0E3TJC3 AraC-like DNA-binding protein [Catenibacillus scindens] 56.6 1e-12
A0A0U2L6X6 Transcriptional regulator [Paenibacillus ehimensis] 55.5 2e-12
O52494 AraC family transcriptional regulator [Listeria monocytoge... 51.6 5e-11
>A0A7G2SIP6 AraC family transcriptional regulator [Acinetobacter
sp]
Length=247
Score = 476 bits (1226), Expect = 1e-176
Identities = 246/247 (99%), Positives = 247/247 (100%), Gaps = 0/247 (0%)
Query 1 LGLGIVLQGEKQVVIGDQILTYCAGQTMLTTIDVPVVSHTHNAKNHKPFLGLMLLLDLSM 60
+GLGIVLQGEKQVVIGDQILTYCAGQTMLTTIDVPVVSHTHNAKNHKPFLGLMLLLDLSM
Sbjct 1 MGLGIVLQGEKQVVIGDQILTYCAGQTMLTTIDVPVVSHTHNAKNHKPFLGLMLLLDLSM 60
Query 61 ISKVVTQMEQLNIKEKVQPSFAVQPIDYVLIEAVQRLVTLLDEPILLSQLSPIIQQEIMI 120
ISKVVTQMEQLNIKEKVQPSFAVQPIDYVLIEAVQRLVTLLDEPILLSQLSPIIQQEIMI
Sbjct 61 ISKVVTQMEQLNIKEKVQPSFAVQPIDYVLIEAVQRLVTLLDEPILLSQLSPIIQQEIMI 120
Query 121 RLLAGVNGVYLRQLIRVGSVSERVAKVVNWLKQNFVETIRLDELADRFYMSSATLRQHFR 180
RLLAGVNGVYLRQLIRVGSVSERVAKVVNWLKQNFVETIRLDELADRFYMSSATLRQHFR
Sbjct 121 RLLAGVNGVYLRQLIRVGSVSERVAKVVNWLKQNFVETIRLDELADRFYMSSATLRQHFR 180
Query 181 EVTGMSPLQYQKHLRLQQARHLLFNQNLEVGHTADLVGYESVSQFSREYARLFGATPLKD 240
EVTGMSPLQYQKHLRLQQARHLLFNQNLEVGHTADLVGYESVSQFSREYARLFGATPLKD
Sbjct 181 EVTGMSPLQYQKHLRLQQARHLLFNQNLEVGHTADLVGYESVSQFSREYARLFGATPLKD 240
Query 241 KQAAQLS 247
KQAAQLS
Sbjct 241 KQAAQLS 247
>Q6FB92 Putative transcriptional regulator (AraC family) [Acinetobacter
baylyi (strain ATCC 33305 / BD413 / ADP1)]
Length=247
Score = 476 bits (1226), Expect = 1e-176
Identities = 246/247 (99%), Positives = 247/247 (100%), Gaps = 0/247 (0%)
Query 1 LGLGIVLQGEKQVVIGDQILTYCAGQTMLTTIDVPVVSHTHNAKNHKPFLGLMLLLDLSM 60
+GLGIVLQGEKQVVIGDQILTYCAGQTMLTTIDVPVVSHTHNAKNHKPFLGLMLLLDLSM
Sbjct 1 MGLGIVLQGEKQVVIGDQILTYCAGQTMLTTIDVPVVSHTHNAKNHKPFLGLMLLLDLSM 60
Query 61 ISKVVTQMEQLNIKEKVQPSFAVQPIDYVLIEAVQRLVTLLDEPILLSQLSPIIQQEIMI 120
ISKVVTQMEQLNIKEKVQPSFAVQPIDYVLIEAVQRLVTLLDEPILLSQLSPIIQQEIMI
Sbjct 61 ISKVVTQMEQLNIKEKVQPSFAVQPIDYVLIEAVQRLVTLLDEPILLSQLSPIIQQEIMI 120
Query 121 RLLAGVNGVYLRQLIRVGSVSERVAKVVNWLKQNFVETIRLDELADRFYMSSATLRQHFR 180
RLLAGVNGVYLRQLIRVGSVSERVAKVVNWLKQNFVETIRLDELADRFYMSSATLRQHFR
Sbjct 121 RLLAGVNGVYLRQLIRVGSVSERVAKVVNWLKQNFVETIRLDELADRFYMSSATLRQHFR 180
Query 181 EVTGMSPLQYQKHLRLQQARHLLFNQNLEVGHTADLVGYESVSQFSREYARLFGATPLKD 240
EVTGMSPLQYQKHLRLQQARHLLFNQNLEVGHTADLVGYESVSQFSREYARLFGATPLKD
Sbjct 181 EVTGMSPLQYQKHLRLQQARHLLFNQNLEVGHTADLVGYESVSQFSREYARLFGATPLKD 240
Query 241 KQAAQLS 247
KQAAQLS
Sbjct 241 KQAAQLS 247
>A0A1Q3N6M7 AraC family transcriptional regulator [Acinetobacter
sp. 39-4]
Length=247
Score = 453 bits (1166), Expect = 2e-167
Identities = 234/247 (95%), Positives = 239/247 (97%), Gaps = 0/247 (0%)
Query 1 LGLGIVLQGEKQVVIGDQILTYCAGQTMLTTIDVPVVSHTHNAKNHKPFLGLMLLLDLSM 60
+GLGIVLQGEKQVVIGDQILTY GQTMLTTIDVPVVSHTHNA+NHKPFLGLMLL D+SM
Sbjct 1 MGLGIVLQGEKQVVIGDQILTYSVGQTMLTTIDVPVVSHTHNAENHKPFLGLMLLFDVSM 60
Query 61 ISKVVTQMEQLNIKEKVQPSFAVQPIDYVLIEAVQRLVTLLDEPILLSQLSPIIQQEIMI 120
ISKV QMEQLNIKEKVQPSFAVQPIDYVLIEAVQRLVTLLDEPILLSQLSPIIQQEIMI
Sbjct 61 ISKVAPQMEQLNIKEKVQPSFAVQPIDYVLIEAVQRLVTLLDEPILLSQLSPIIQQEIMI 120
Query 121 RLLAGVNGVYLRQLIRVGSVSERVAKVVNWLKQNFVETIRLDELADRFYMSSATLRQHFR 180
RLLAGVNGVYLRQLIRVGSVSERVAKVVNWLKQNFVETIRLDELADRFYMSSATLRQHFR
Sbjct 121 RLLAGVNGVYLRQLIRVGSVSERVAKVVNWLKQNFVETIRLDELADRFYMSSATLRQHFR 180
Query 181 EVTGMSPLQYQKHLRLQQARHLLFNQNLEVGHTADLVGYESVSQFSREYARLFGATPLKD 240
EVTGMSPLQYQK LRLQQARHLLFNQ+LEVGH ADLVGYES+SQFSREYARLFGATPLKD
Sbjct 181 EVTGMSPLQYQKQLRLQQARHLLFNQHLEVGHAADLVGYESLSQFSREYARLFGATPLKD 240
Query 241 KQAAQLS 247
KQAAQ S
Sbjct 241 KQAAQFS 247
>A0A1Q3NBJ7 AraC family transcriptional regulator [Acinetobacter
sp. 38-8]
Length=247
Score = 453 bits (1166), Expect = 2e-167
Identities = 234/247 (95%), Positives = 239/247 (97%), Gaps = 0/247 (0%)
Query 1 LGLGIVLQGEKQVVIGDQILTYCAGQTMLTTIDVPVVSHTHNAKNHKPFLGLMLLLDLSM 60
+GLGIVLQGEKQVVIGDQILTY GQTMLTTIDVPVVSHTHNA+NHKPFLGLMLL D+SM
Sbjct 1 MGLGIVLQGEKQVVIGDQILTYSVGQTMLTTIDVPVVSHTHNAENHKPFLGLMLLFDVSM 60
Query 61 ISKVVTQMEQLNIKEKVQPSFAVQPIDYVLIEAVQRLVTLLDEPILLSQLSPIIQQEIMI 120
ISKV QMEQLNIKEKVQPSFAVQPIDYVLIEAVQRLVTLLDEPILLSQLSPIIQQEIMI
Sbjct 61 ISKVAPQMEQLNIKEKVQPSFAVQPIDYVLIEAVQRLVTLLDEPILLSQLSPIIQQEIMI 120
Query 121 RLLAGVNGVYLRQLIRVGSVSERVAKVVNWLKQNFVETIRLDELADRFYMSSATLRQHFR 180
RLLAGVNGVYLRQLIRVGSVSERVAKVVNWLKQNFVETIRLDELADRFYMSSATLRQHFR
Sbjct 121 RLLAGVNGVYLRQLIRVGSVSERVAKVVNWLKQNFVETIRLDELADRFYMSSATLRQHFR 180
Query 181 EVTGMSPLQYQKHLRLQQARHLLFNQNLEVGHTADLVGYESVSQFSREYARLFGATPLKD 240
EVTGMSPLQYQK LRLQQARHLLFNQ+LEVGH ADLVGYES+SQFSREYARLFGATPLKD
Sbjct 181 EVTGMSPLQYQKQLRLQQARHLLFNQHLEVGHAADLVGYESLSQFSREYARLFGATPLKD 240
Query 241 KQAAQLS 247
KQAAQ S
Sbjct 241 KQAAQFS 247
>A0A137YNE1 AraC family transcriptional regulator [Acinetobacter
venetianus]
Length=247
Score = 451 bits (1159), Expect = 2e-166
Identities = 231/247 (94%), Positives = 239/247 (97%), Gaps = 0/247 (0%)
Query 1 LGLGIVLQGEKQVVIGDQILTYCAGQTMLTTIDVPVVSHTHNAKNHKPFLGLMLLLDLSM 60
+GLGIVLQGEKQVVIGDQILTY AGQTMLTTIDVPVVSHTHNA+NHKPFLGLMLLLD+SM
Sbjct 1 MGLGIVLQGEKQVVIGDQILTYSAGQTMLTTIDVPVVSHTHNAENHKPFLGLMLLLDVSM 60
Query 61 ISKVVTQMEQLNIKEKVQPSFAVQPIDYVLIEAVQRLVTLLDEPILLSQLSPIIQQEIMI 120
ISKV TQMEQLNIKEKVQPSFAVQPIDYVLIEAVQRLVTLLDEP+LLSQLSPIIQQEIMI
Sbjct 61 ISKVATQMEQLNIKEKVQPSFAVQPIDYVLIEAVQRLVTLLDEPVLLSQLSPIIQQEIMI 120
Query 121 RLLAGVNGVYLRQLIRVGSVSERVAKVVNWLKQNFVETIRLDELADRFYMSSATLRQHFR 180
LL GVNGVYLRQLIR GSVSERVAKVVNWLKQNFVETIRLDELADRFYMSSATLRQHFR
Sbjct 121 HLLTGVNGVYLRQLIRAGSVSERVAKVVNWLKQNFVETIRLDELADRFYMSSATLRQHFR 180
Query 181 EVTGMSPLQYQKHLRLQQARHLLFNQNLEVGHTADLVGYESVSQFSREYARLFGATPLKD 240
EVTGMSPLQYQK LRLQQARHLLFN++L+VGH ADLVGYES+SQFSREYARLFGATPLKD
Sbjct 181 EVTGMSPLQYQKQLRLQQARHLLFNRHLDVGHAADLVGYESLSQFSREYARLFGATPLKD 240
Query 241 KQAAQLS 247
KQAAQ S
Sbjct 241 KQAAQFS 247
>N8W828 HTH araC/xylS-type domain-containing protein [Acinetobacter
sp. CIP 56.2]
Length=297
Score = 358 bits (919), Expect = 4e-129
Identities = 172/246 (70%), Positives = 209/246 (85%), Gaps = 0/246 (0%)
Query 1 LGLGIVLQGEKQVVIGDQILTYCAGQTMLTTIDVPVVSHTHNAKNHKPFLGLMLLLDLSM 60
LGLGIVLQGEKQ++IGDQILTY AGQ+MLTTID+PV+SHT +H+PFLGLMLLLD+ M
Sbjct 51 LGLGIVLQGEKQIMIGDQILTYTAGQSMLTTIDIPVISHTRQTSHHQPFLGLMLLLDVPM 110
Query 61 ISKVVTQMEQLNIKEKVQPSFAVQPIDYVLIEAVQRLVTLLDEPILLSQLSPIIQQEIMI 120
I+ +V +M Q+++KEKVQPSF +Q IDY L+EA+ RLV LLDEP+LL QL+PI+QQEIMI
Sbjct 111 ITAMVAEMGQIHLKEKVQPSFGIQTIDYTLLEAISRLVNLLDEPVLLPQLAPILQQEIMI 170
Query 121 RLLAGVNGVYLRQLIRVGSVSERVAKVVNWLKQNFVETIRLDELADRFYMSSATLRQHFR 180
RLL G NGVYLRQLI+ GSVS+++AK V WLK NFV+ IR+D+LA++ YMS +T RQHFR
Sbjct 171 RLLTGPNGVYLRQLIKTGSVSQKIAKAVAWLKHNFVQAIRMDDLAEQVYMSPSTFRQHFR 230
Query 181 EVTGMSPLQYQKHLRLQQARHLLFNQNLEVGHTADLVGYESVSQFSREYARLFGATPLKD 240
E+TGMSPLQYQK LRLQ+ARHL+ NQ+ +VGH A LVGYES SQFSREY+RLFG P +D
Sbjct 231 EITGMSPLQYQKQLRLQEARHLMLNQHFDVGHAAGLVGYESASQFSREYSRLFGTAPQRD 290
Query 241 KQAAQL 246
Q QL
Sbjct 291 IQELQL 296
>A0A6P1LRJ4 AraC family transcriptional regulator [Acinetobacter
dispersus]
Length=298
Score = 358 bits (919), Expect = 4e-129
Identities = 172/246 (70%), Positives = 209/246 (85%), Gaps = 0/246 (0%)
Query 1 LGLGIVLQGEKQVVIGDQILTYCAGQTMLTTIDVPVVSHTHNAKNHKPFLGLMLLLDLSM 60
LGLGIVLQGEKQ++IGDQILTY AGQ+MLTTID+PV+SHT +H+PFLGLMLLLD+ M
Sbjct 52 LGLGIVLQGEKQIMIGDQILTYTAGQSMLTTIDIPVISHTRQTSHHQPFLGLMLLLDVPM 111
Query 61 ISKVVTQMEQLNIKEKVQPSFAVQPIDYVLIEAVQRLVTLLDEPILLSQLSPIIQQEIMI 120
I+ +V +M Q+++KEKVQPSF +Q IDY L+EA+ RLV LLDEP+LL QL+PI+QQEIMI
Sbjct 112 ITAMVAEMGQIHLKEKVQPSFGIQTIDYTLLEAISRLVNLLDEPVLLPQLAPILQQEIMI 171
Query 121 RLLAGVNGVYLRQLIRVGSVSERVAKVVNWLKQNFVETIRLDELADRFYMSSATLRQHFR 180
RLL G NGVYLRQLI+ GSVS+++AK V WLK NFV+ IR+D+LA++ YMS +T RQHFR
Sbjct 172 RLLTGPNGVYLRQLIKTGSVSQKIAKAVAWLKHNFVQAIRMDDLAEQVYMSPSTFRQHFR 231
Query 181 EVTGMSPLQYQKHLRLQQARHLLFNQNLEVGHTADLVGYESVSQFSREYARLFGATPLKD 240
E+TGMSPLQYQK LRLQ+ARHL+ NQ+ +VGH A LVGYES SQFSREY+RLFG P +D
Sbjct 232 EITGMSPLQYQKQLRLQEARHLMLNQHFDVGHAAGLVGYESASQFSREYSRLFGTAPQRD 291
Query 241 KQAAQL 246
Q QL
Sbjct 292 IQELQL 297
>N9SCQ6 HTH araC/xylS-type domain-containing protein [Acinetobacter
dispersus]
Length=297
Score = 355 bits (912), Expect = 5e-128
Identities = 170/246 (69%), Positives = 208/246 (85%), Gaps = 0/246 (0%)
Query 1 LGLGIVLQGEKQVVIGDQILTYCAGQTMLTTIDVPVVSHTHNAKNHKPFLGLMLLLDLSM 60
LGLGIVLQGEKQ++IGDQILTY AGQ+MLTTID+PV+SHT +H+PFLGLMLLLD+ M
Sbjct 51 LGLGIVLQGEKQIMIGDQILTYTAGQSMLTTIDIPVISHTRQTSHHQPFLGLMLLLDVPM 110
Query 61 ISKVVTQMEQLNIKEKVQPSFAVQPIDYVLIEAVQRLVTLLDEPILLSQLSPIIQQEIMI 120
I+ +V +M Q+++KEKVQPSF +Q +DY L+EA+ RLV LLDEP+LL QL+PI+QQEIMI
Sbjct 111 ITAMVAEMGQIHLKEKVQPSFGIQTMDYTLLEAISRLVNLLDEPVLLPQLAPILQQEIMI 170
Query 121 RLLAGVNGVYLRQLIRVGSVSERVAKVVNWLKQNFVETIRLDELADRFYMSSATLRQHFR 180
RLL G NGVYLRQLI+ GSVS+++ K V WLK NFV+ IR+D+LA++ YMS +T RQHFR
Sbjct 171 RLLTGPNGVYLRQLIKTGSVSQKITKAVAWLKHNFVQAIRMDDLAEQVYMSPSTFRQHFR 230
Query 181 EVTGMSPLQYQKHLRLQQARHLLFNQNLEVGHTADLVGYESVSQFSREYARLFGATPLKD 240
E+TGMSPLQYQK LRLQ+ARHL+ NQ+ +VGH A LVGYES SQFSREY+RLFG P +D
Sbjct 231 EITGMSPLQYQKQLRLQEARHLMLNQHFDVGHAAGLVGYESASQFSREYSRLFGTAPQRD 290
Query 241 KQAAQL 246
Q QL
Sbjct 291 IQELQL 296
>N9K2W8 HTH araC/xylS-type domain-containing protein [Acinetobacter
sp. ANC 3929]
Length=297
Score = 350 bits (898), Expect = 7e-126
Identities = 165/245 (67%), Positives = 210/245 (86%), Gaps = 0/245 (0%)
Query 1 LGLGIVLQGEKQVVIGDQILTYCAGQTMLTTIDVPVVSHTHNAKNHKPFLGLMLLLDLSM 60
L LGIVLQGEKQ++IG+QILTY AGQ+MLTTID+P++SHT +NH+PFLG+MLLLD+ M
Sbjct 51 LSLGIVLQGEKQIMIGNQILTYTAGQSMLTTIDIPIISHTRQTRNHQPFLGVMLLLDVPM 110
Query 61 ISKVVTQMEQLNIKEKVQPSFAVQPIDYVLIEAVQRLVTLLDEPILLSQLSPIIQQEIMI 120
I+++V +M Q+++KEKVQPSF +Q IDY L+EA+ RLV LLDEP+LL QL+PI+QQEIMI
Sbjct 111 ITEMVMEMGQVHLKEKVQPSFGIQTIDYTLLEAINRLVNLLDEPVLLPQLAPILQQEIMI 170
Query 121 RLLAGVNGVYLRQLIRVGSVSERVAKVVNWLKQNFVETIRLDELADRFYMSSATLRQHFR 180
RLL G NG+YLRQLI+ GS+S+++A+ V+WLKQNFV+ +R+DELA+ YMS +T RQHFR
Sbjct 171 RLLTGPNGIYLRQLIKTGSISQKIAQAVSWLKQNFVQEMRMDELAEHVYMSPSTFRQHFR 230
Query 181 EVTGMSPLQYQKHLRLQQARHLLFNQNLEVGHTADLVGYESVSQFSREYARLFGATPLKD 240
E+TG+SPLQYQK LRLQ+ARHL+ NQ+ +VGH A LVGYES SQFSREY+RLFG P +D
Sbjct 231 EMTGISPLQYQKQLRLQEARHLMLNQHFDVGHAAGLVGYESASQFSREYSRLFGNAPQRD 290
Query 241 KQAAQ 245
Q Q
Sbjct 291 IQDLQ 295
>N9Q8F0 HTH araC/xylS-type domain-containing protein [Acinetobacter
vivianii]
Length=297
Score = 346 bits (888), Expect = 2e-124
Identities = 166/246 (67%), Positives = 206/246 (84%), Gaps = 0/246 (0%)
Query 1 LGLGIVLQGEKQVVIGDQILTYCAGQTMLTTIDVPVVSHTHNAKNHKPFLGLMLLLDLSM 60
LGLG+VLQGEKQ+++G QILTY AGQ+MLTTID+PV+SHT N+ H+PFLGLML LDL +
Sbjct 51 LGLGMVLQGEKQIIVGQQILTYTAGQSMLTTIDIPVISHTRNSIKHQPFLGLMLQLDLQL 110
Query 61 ISKVVTQMEQLNIKEKVQPSFAVQPIDYVLIEAVQRLVTLLDEPILLSQLSPIIQQEIMI 120
I ++V +M Q ++ E+V PSF VQ IDY L+E +QRLV LL+EP+LL QL PI+QQEIMI
Sbjct 111 IREMVAEMGQEHLNEQVYPSFGVQTIDYALLETIQRLVNLLNEPVLLPQLYPILQQEIMI 170
Query 121 RLLAGVNGVYLRQLIRVGSVSERVAKVVNWLKQNFVETIRLDELADRFYMSSATLRQHFR 180
RLL GVN +YLRQLI+ GSVS+++AK V WLKQNFV+ +R+D+LA++ YMS +T RQHFR
Sbjct 171 RLLTGVNAIYLRQLIKTGSVSQKIAKAVTWLKQNFVQAVRMDDLAEQAYMSPSTFRQHFR 230
Query 181 EVTGMSPLQYQKHLRLQQARHLLFNQNLEVGHTADLVGYESVSQFSREYARLFGATPLKD 240
E+TGMSPLQYQK LRLQ+ARHL+ NQ+L+VGH A LVGYES SQFSREY+RLFG P +D
Sbjct 231 EITGMSPLQYQKQLRLQEARHLMLNQHLDVGHAAGLVGYESASQFSREYSRLFGNAPQRD 290
Query 241 KQAAQL 246
Q QL
Sbjct 291 IQDLQL 296
>N8V404 HTH araC/xylS-type domain-containing protein [Acinetobacter
vivianii]
Length=298
Score = 344 bits (882), Expect = 2e-123
Identities = 165/246 (67%), Positives = 204/246 (83%), Gaps = 0/246 (0%)
Query 1 LGLGIVLQGEKQVVIGDQILTYCAGQTMLTTIDVPVVSHTHNAKNHKPFLGLMLLLDLSM 60
LGLG+VLQGEKQ+++G QILTY AGQ+MLTTID+PV+SHT N+ H+PFLGLML LDL +
Sbjct 52 LGLGMVLQGEKQIIVGQQILTYTAGQSMLTTIDIPVISHTRNSIKHQPFLGLMLQLDLQL 111
Query 61 ISKVVTQMEQLNIKEKVQPSFAVQPIDYVLIEAVQRLVTLLDEPILLSQLSPIIQQEIMI 120
I ++V +M Q + E+V PSF VQ IDY L+E +QRLV LL+EP+LL QL PI+QQEIMI
Sbjct 112 IREMVAEMGQGKLNEQVYPSFGVQTIDYALLETIQRLVNLLNEPVLLPQLYPILQQEIMI 171
Query 121 RLLAGVNGVYLRQLIRVGSVSERVAKVVNWLKQNFVETIRLDELADRFYMSSATLRQHFR 180
RLL G N +YLRQLI+ GSVS+++AK V WLKQNFV+ +R+D+LA++ YMS +T RQHFR
Sbjct 172 RLLTGANAIYLRQLIKTGSVSQKIAKAVTWLKQNFVQAVRMDDLAEQAYMSPSTFRQHFR 231
Query 181 EVTGMSPLQYQKHLRLQQARHLLFNQNLEVGHTADLVGYESVSQFSREYARLFGATPLKD 240
E+TGMSPLQYQK LRLQ+ARHL+ NQ+L+VGH A LVGYES SQFSREY+RLFG P +D
Sbjct 232 EITGMSPLQYQKQLRLQEARHLMLNQHLDVGHAAGLVGYESASQFSREYSRLFGNAPQRD 291
Query 241 KQAAQL 246
Q QL
Sbjct 292 IQDLQL 297
>A0A0B0KTZ3 Transcriptional regulator, AraC family [Acinetobacter
sp. neg1]
Length=298
Score = 341 bits (875), Expect = 2e-122
Identities = 164/246 (67%), Positives = 203/246 (83%), Gaps = 0/246 (0%)
Query 1 LGLGIVLQGEKQVVIGDQILTYCAGQTMLTTIDVPVVSHTHNAKNHKPFLGLMLLLDLSM 60
LGLG+VLQGEKQ+++G QILTY AGQ+MLTTID+PV+SHT N+ H+PFLGLML LDL +
Sbjct 52 LGLGMVLQGEKQIIVGQQILTYTAGQSMLTTIDIPVISHTRNSIKHQPFLGLMLQLDLQL 111
Query 61 ISKVVTQMEQLNIKEKVQPSFAVQPIDYVLIEAVQRLVTLLDEPILLSQLSPIIQQEIMI 120
I ++V +M Q + E+V PSF VQ IDY L+E +QRLV LL+EP+LL QL PI+QQEIMI
Sbjct 112 IREMVAEMGQGKLNEQVYPSFGVQMIDYALLETIQRLVNLLNEPVLLPQLYPILQQEIMI 171
Query 121 RLLAGVNGVYLRQLIRVGSVSERVAKVVNWLKQNFVETIRLDELADRFYMSSATLRQHFR 180
LL G N +YLRQLI+ GSVS+++AK V WLKQNFV+ +R+D+LA++ YMS +T RQHFR
Sbjct 172 SLLTGANAIYLRQLIKTGSVSQKIAKAVTWLKQNFVQAVRMDDLAEQAYMSPSTFRQHFR 231
Query 181 EVTGMSPLQYQKHLRLQQARHLLFNQNLEVGHTADLVGYESVSQFSREYARLFGATPLKD 240
E+TGMSPLQYQK LRLQ+ARHL+ NQ+L+VGH A LVGYES SQFSREY+RLFG P +D
Sbjct 232 EITGMSPLQYQKQLRLQEARHLMLNQHLDVGHAAGLVGYESASQFSREYSRLFGNAPQRD 291
Query 241 KQAAQL 246
Q QL
Sbjct 292 IQDLQL 297
>A8KCK0 HTH AraC-type regulator [Caldimonas brevitalea]
Length=322
Score = 167 bits (422), Expect = 1e-53
Identities = 90/237 (38%), Positives = 140/237 (59%), Gaps = 1/237 (0%)
Query 5 IVLQGEKQVVIGDQILTYCAGQTMLTTIDVPVVSHTHNAKNHKPFLGLMLLLDLSMISKV 64
I+ QG K+V++ D++ Y + ++ + D+P+ + +A +P+L L LD +S++
Sbjct 75 IIAQGAKRVMLRDEVYCYDTSRFLVFSTDLPISAQVTDATFERPYLCFRLDLDPKEVSEL 134
Query 65 VTQM-EQLNIKEKVQPSFAVQPIDYVLIEAVQRLVTLLDEPILLSQLSPIIQQEIMIRLL 123
V Q+ + + +++A RL+ LLD P + L+P+ +E++ RLL
Sbjct 135 VLQLGAPPATRNATSRGLFLSAATDAMLDAAVRLLRLLDTPEDVPALAPLATRELVYRLL 194
Query 124 AGVNGVYLRQLIRVGSVSERVAKVVNWLKQNFVETIRLDELADRFYMSSATLRQHFREVT 183
G L Q+ R S RV + + WLK N+ E +++DELA MS+++L HFR +T
Sbjct 195 KSEQGERLAQVARADSPGHRVTRAIAWLKANYAEPLKVDELARCCCMSTSSLHHHFRVLT 254
Query 184 GMSPLQYQKHLRLQQARHLLFNQNLEVGHTADLVGYESVSQFSREYARLFGATPLKD 240
MSPLQYQK LRLQ+AR L+ ++ +EV A VGYES SQFSREY+RL+G P KD
Sbjct 255 SMSPLQYQKQLRLQEARRLMLSEGIEVSKAAYTVGYESASQFSREYSRLYGIAPSKD 311
>A0A1Y0B7R6 AraC-family transcriptional regulator [Pseudomonas
aeruginosa]
Length=310
Score = 165 bits (418), Expect = 3e-53
Identities = 90/244 (37%), Positives = 145/244 (59%), Gaps = 1/244 (0%)
Query 3 LGIVLQGEKQVVIGDQILTYCAGQTMLTTIDVPVVSHTHNAKNHKPFLGLMLLLDLSMIS 62
L I+ QG K+V + ++ Y ++ ++ +P+ +A P+L + L +D + I+
Sbjct 64 LCIIAQGRKEVQLAEERYIYDPLHYLVVSVTLPLAGQVIDASPDAPYLCVRLDIDPAEIT 123
Query 63 KVVTQMEQLNI-KEKVQPSFAVQPIDYVLIEAVQRLVTLLDEPILLSQLSPIIQQEIMIR 121
++++ + + + V ID L++AV RL+ LLD P + L+P+I +EI R
Sbjct 124 QLISDAGPMEVASRRGDRGLYVDRIDASLLDAVLRLIHLLDSPRDIPMLAPLILREIFYR 183
Query 122 LLAGVNGVYLRQLIRVGSVSERVAKVVNWLKQNFVETIRLDELADRFYMSSATLRQHFRE 181
LL G L ++ S + R+ + ++W+ QN+ + +R+++LA +S +TL F+
Sbjct 184 LLRSGQGQRLHEIAIADSQAHRITRAIDWINQNYGKPLRIEQLAQVVNLSPSTLHHRFKA 243
Query 182 VTGMSPLQYQKHLRLQQARHLLFNQNLEVGHTADLVGYESVSQFSREYARLFGATPLKDK 241
VT MSPLQYQK LRLQ+AR L+F++ LEV VGYES SQFSREY+RLFGA PL+D
Sbjct 244 VTAMSPLQYQKQLRLQEARRLIFSEGLEVAAAGYRVGYESPSQFSREYSRLFGAPPLRDL 303
Query 242 QAAQ 245
A+
Sbjct 304 ARAR 307
>B4XH84 AraC [Actinobacillus pleuropneumoniae]
Length=284
Score = 154 bits (389), Expect = 4e-49
Identities = 87/237 (37%), Positives = 138/237 (58%), Gaps = 1/237 (0%)
Query 5 IVLQGEKQVVIGDQILTYCAGQTMLTTIDVPVVSHTHNAKNHKPFLGLMLLLDLSMISKV 64
IVLQGE+++ IGDQ + M ++VP+ A KP+L + + +DL M++ +
Sbjct 46 IVLQGERKICIGDQCTLFSNQHFMFCPVNVPLSVEVVEASPEKPYLMMTMKIDLKMVASI 105
Query 65 VTQMEQLNIKEKVQPSFAVQ-PIDYVLIEAVQRLVTLLDEPILLSQLSPIIQQEIMIRLL 123
V + + K + + + +Q ++ L+ + L+ LL P + L+P+IQQ+I LL
Sbjct 106 VPHIPKTIAKNQPKSTAFLQWQLEENLLAQFEHLIDLLKTPEDIDFLAPLIQQQIYYVLL 165
Query 124 AGVNGVYLRQLIRVGSVSERVAKVVNWLKQNFVETIRLDELADRFYMSSATLRQHFREVT 183
G LR+L++VGS + R+A+ W++Q+ E +R+D+LA + MS + HF+++T
Sbjct 166 KSDQGQKLRELVQVGSHTNRIAQTALWIEQHLSEPLRVDDLAKQAGMSVSGFHSHFKKMT 225
Query 184 GMSPLQYQKHLRLQQARHLLFNQNLEVGHTADLVGYESVSQFSREYARLFGATPLKD 240
MSPLQYQK RL A+ L+ + + A VGYES SQFSREY R FG +P D
Sbjct 226 NMSPLQYQKSHRLLAAQRLIQAKQSNIASVAFQVGYESPSQFSREYKRHFGVSPKGD 282
>E2D2R1 AraC family transcriptional regulator [Escherichia coli]
Length=318
Score = 116 bits (290), Expect = 3e-34
Identities = 73/244 (30%), Positives = 128/244 (52%), Gaps = 9/244 (4%)
Query 2 GLGIVLQGEKQVVIGDQILTYCAGQTMLTTIDVPVVSHTHNAKNHKPFLGLMLLLDLSMI 61
G+ I+ G K I +++ Y A + +L T+ +P T+ A + P GL L +D+ +
Sbjct 69 GIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQL 127
Query 62 SKVVTQMEQLNIKEKVQPSFAVQPIDYVLIE-----AVQRLVTLLDEPILLSQLSPIIQQ 116
+++ + + E QPS A I+ + A +RL+ +++ P+ L I +
Sbjct 128 QELLMDIGE---DEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIR 184
Query 117 EIMIRLLAGVNGVYLRQLIRVGSVSERVAKVVNWLKQNFVETIRLDELADRFYMSSATLR 176
EI+ +L G G L L+ + +++V+ ++ + E + +++LA MS +
Sbjct 185 EILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFH 244
Query 177 QHFREVTGMSPLQYQKHLRLQQARHLLFNQNLEVGHTADLVGYESVSQFSREYARLFGAT 236
+F+ VT SPLQY K+ RL +AR ++ + ++ A VGYES SQFSRE+ R FG T
Sbjct 245 HNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVT 304
Query 237 PLKD 240
P +D
Sbjct 305 PGED 308
>B8Y3J6 AraC [Actinobacillus pleuropneumoniae]
Length=140
Score = 84.3 bits (207), Expect = 8e-24
Identities = 44/114 (39%), Positives = 71/114 (62%), Gaps = 0/114 (0%)
Query 90 LIEAVQRLVTLLDEPILLSQLSPIIQQEIMIRLLAGVNGVYLRQLIRVGSVSERVAKVVN 149
L+ +RL+ LL P + L+P+IQQ+I LL G LR+L+ GS ++R+A+
Sbjct 27 LLAQFERLIDLLKTPEDIDFLAPLIQQQIYYVLLKSNQGQKLRELVNEGSHTQRIAQTAF 86
Query 150 WLKQNFVETIRLDELADRFYMSSATLRQHFREVTGMSPLQYQKHLRLQQARHLL 203
W++Q+ E +R+++LA + MS + H +++T MSPLQYQK RL A+ L+
Sbjct 87 WIEQHLSEPLRVEDLAKQAGMSVSGFHSHLKKMTNMSPLQYQKSHRLLAAQRLI 140
>J7G0L9 AraC family transcriptional regulator [Paenibacillus sp.
1794]
Length=191
Score = 55.8 bits (133), Expect = 7e-13
Identities = 38/142 (27%), Positives = 68/142 (48%), Gaps = 16/142 (11%)
Query 107 LSQLSPIIQQEIMIRLLAGVNGVYLRQLIRVGSV-----------SERVAKVVNWLKQNF 155
L P++++E+ R++ LR+LI G+V +A+V+ ++ +F
Sbjct 43 LDMADPLVEEELEARMICD-----LRELIWEGTVPASPKMAHAAADRHLAQVLEYVHAHF 97
Query 156 VETIRLDELADRFYMSSATLRQHFREVTGMSPLQYQKHLRLQQARHLLFNQNLEVGHTAD 215
E + + LA S + F+ +TG+ P QY LR+++A L V +
Sbjct 98 TEQLSVSSLAAMAMQSRYHFIRSFKSLTGVPPYQYVLQLRVREAMEQLKTSADTVTVISF 157
Query 216 LVGYESVSQFSREYARLFGATP 237
+G+ S SQF R +A++ G TP
Sbjct 158 NLGFSSTSQFFRAFAKMTGMTP 179
Score = 25.4 bits (54), Expect = 0.015
Identities = 29/116 (25%), Positives = 51/116 (44%), Gaps = 8/116 (7%)
Query 79 PSFAVQPIDYVLIEAVQRLVTLLDEPILLSQLSPIIQQEI--MIRLLAGVNGVYLRQLIR 136
P A D L + ++ + E + +S L+ + Q IR + GV Q +
Sbjct 75 PKMAHAAADRHLAQVLEYVHAHFTEQLSVSSLAAMAMQSRYHFIRSFKSLTGVPPYQYV- 133
Query 137 VGSVSERVAKVVNWLKQNFVETIRLDELADRFYMSSATLRQHFREVTGMSPLQYQK 192
+ RV + + LK + +T+ + F +S R F ++TGM+P QY+K
Sbjct 134 ---LQLRVREAMEQLKTS-ADTVTVISFNLGFSSTSQFFRA-FAKMTGMTPEQYRK 184
>Q8XMB9 Probable transcriptional regulator [Clostridium perfringens
(strain 13 / Type A)]
Length=279
Score = 56.6 bits (135), Expect = 9e-13
Identities = 29/95 (31%), Positives = 54/95 (57%), Gaps = 0/95 (0%)
Query 144 VAKVVNWLKQNFVETIRLDELADRFYMSSATLRQHFREVTGMSPLQYQKHLRLQQARHLL 203
+ +N++ N++ +I + E+AD +S + L + F + G+SP +Y +LR+ +A LL
Sbjct 173 IQDALNFINSNYMHSITVQEIADYVNLSRSYLYKMFIKNLGISPQRYLINLRMYKATLLL 232
Query 204 FNQNLEVGHTADLVGYESVSQFSREYARLFGATPL 238
+ L +G A VGY FS+ +++ F +PL
Sbjct 233 KSTKLPIGEVASSVGYSDSLLFSKTFSKHFSMSPL 267
Score = 18.5 bits (36), Expect = 3.0
Identities = 9/22 (41%), Positives = 12/22 (55%), Gaps = 4/22 (18%)
Query 172 SATLRQHFREVTGMSPLQYQKH 193
S T +HF MSPL Y+ +
Sbjct 255 SKTFSKHF----SMSPLNYRNN 272
>A0A0E3TJC3 AraC-like DNA-binding protein [Catenibacillus scindens]
Length=412
Score = 56.6 bits (135), Expect = 1e-12
Identities = 30/107 (28%), Positives = 57/107 (53%), Gaps = 0/107 (0%)
Query 131 LRQLIRVGSVSERVAKVVNWLKQNFVETIRLDELADRFYMSSATLRQHFREVTGMSPLQY 190
+R++ + S V+ N++ Q+ E IR+ +L +M+ L HF++ TGM+
Sbjct 296 VRKIKEMPRYSREVSVCYNYILQHLYEPIRVQDLESVAHMNRKNLTIHFKKETGMTIPSL 355
Query 191 QKHLRLQQARHLLFNQNLEVGHTADLVGYESVSQFSREYARLFGATP 237
RL++AR+LL ++ + + L+ + S S FS+ + +G TP
Sbjct 356 IMKKRLEEARYLLETSDISLSGLSSLLCFSSQSHFSKRFGEYYGMTP 402
Score = 20.4 bits (41), Expect = 0.77
Identities = 8/23 (35%), Positives = 13/23 (57%), Gaps = 0/23 (0%)
Query 169 YMSSATLRQHFREVTGMSPLQYQ 191
+ S + + F E GM+P QY+
Sbjct 384 FSSQSHFSKRFGEYYGMTPKQYR 406
>A0A0U2L6X6 Transcriptional regulator [Paenibacillus ehimensis]
Length=269
Score = 55.5 bits (132), Expect = 2e-12
Identities = 36/149 (24%), Positives = 70/149 (47%), Gaps = 7/149 (5%)
Query 103 EPILLSQLSPIIQQEIMIRLLAGVNGVYLRQLIRV-------GSVSERVAKVVNWLKQNF 155
E +L P+ +E R+L + V + RV G+++ + ++ ++ ++
Sbjct 117 ELLLRDGPDPLAVEETEDRVLTYIRRVVGKNDSRVLNGRHVDGALAPGMTDILEFIHAHY 176
Query 156 VETIRLDELADRFYMSSATLRQHFREVTGMSPLQYQKHLRLQQARHLLFNQNLEVGHTAD 215
E + ++ LA Y S + F + G++P QY LR++QA+ L V +
Sbjct 177 TERLTMERLASLVYQSKFHFIRSFTQTVGVTPYQYILRLRIEQAKEQLVRTRASVTEISY 236
Query 216 LVGYESVSQFSREYARLFGATPLKDKQAA 244
+G+ S SQ R +A+ G TP + ++ A
Sbjct 237 SLGFSSPSQLYRAFAKATGVTPEQYRKGA 265
>O52494 AraC family transcriptional regulator [Listeria monocytogenes]
Length=292
Score = 51.6 bits (122), Expect = 5e-11
Identities = 47/241 (20%), Positives = 105/241 (44%), Gaps = 24/241 (10%)
Query 8 QGEKQVVIGDQILTYCA---GQTMLTTIDVPVVSHTHNAKNHKPFLGLMLL----LDLSM 60
+GE QV+ G + + A + ++ D+ + + L ML L
Sbjct 58 EGEIQVINGGDVHYFLASPSSERIVIQFDLSLFQEEMQMDDKMQTLREMLTEMAHLSREW 117
Query 61 ISKVVTQMEQLNIKEKVQPSFAVQPIDYVLIEAVQRLVTLL--DEPILLSQLSPIIQQEI 118
+ V +M+ L + + S Y+L + ++ L+ + P + +Q +I ++
Sbjct 118 PEETVAKMQSLIMNIHSESSGEKPGKHYILKADLLAIIGLIYREIPQIKTQPDSVISEDA 177
Query 119 MIRLLAGVNGVYLRQLIRVGSVSERVAKVVNWLKQNFVETIRLDELADRFYMSSATLRQH 178
+++ ++ ++ ++ +++++++ E + L E+A+ S+ +
Sbjct 178 VLKSQETLH---------------KLDQIFSYVEKHYQEPVSLQEVANYTGFSTYYFTKF 222
Query 179 FREVTGMSPLQYQKHLRLQQARHLLFNQNLEVGHTADLVGYESVSQFSREYARLFGATPL 238
F+ TGM+ + + RL +A+ +L N+ V A+L G+ SV F + R G PL
Sbjct 223 FKRNTGMTFVTFLNDYRLNKAKWMLLNEAFPVTEVAELAGFSSVKTFHHAFKRAMGVAPL 282
Query 239 K 239
K
Sbjct 283 K 283
Score = 23.5 bits (49), Expect = 0.076
Identities = 14/44 (32%), Positives = 23/44 (52%), Gaps = 3/44 (7%)
Query 150 WLKQNFVETIRLDELADRFYMSSATLRQH-FREVTGMSPLQYQK 192
W+ N E + E+A+ SS H F+ G++PL+Y+K
Sbjct 245 WMLLN--EAFPVTEVAELAGFSSVKTFHHAFKRAMGVAPLKYRK 286
Lambda K H a alpha
0.325 0.138 0.387 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1044232
Database: 829bbbe9b0d5e22e30484910880ad5b0.TrEMBL.fasta
Posted date: May 12, 2024 5:26 AM
Number of letters in database: 6,134
Number of sequences in database: 22
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
