Comparative Genomics

ACIAD1840 / TrEMBL Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: d85626dd93e730b5a940d5740f1d493c.TrEMBL.fasta
           24 sequences; 7,010 total letters



Query= ACIAD1840

Length=89
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

A0A7G2SIV0 AraC family transcriptional regulator [Acinetobacter sp]   176     6e-63
Q6FB90 Putative transcriptional regulator (AraC family) [Acinetob...  176     6e-63
A0A2M8MDQ0 HTH araC/xylS-type domain-containing protein [Acinetob...  165     2e-58
A0A372BP25 AraC family transcriptional regulator [Acinetobacter s...  164     6e-58
A0A137YN81 AraC family transcriptional regulator [Acinetobacter v...  170     1e-57
A0A653KBH7 HTH araC/xylS-type domain-containing protein [Acinetob...  160     8e-54
A0A7H2Q5G8 AraC family transcriptional regulator [Acinetobacter s...  157     1e-52
N8WH64 HTH araC/xylS-type domain-containing protein [Acinetobacte...  153     4e-51
N9K2V9 HTH araC/xylS-type domain-containing protein [Acinetobacte...  152     2e-50
A0A0B0KM12 Transcriptional regulator, AraC family [Acinetobacter ...  151     2e-50
N9PZR8 HTH araC/xylS-type domain-containing protein [Acinetobacte...  151     2e-50
A0A3N4RHJ1 AraC family transcriptional regulator [Acinetobacter s...  151     2e-50
N9P4G3 HTH araC/xylS-type domain-containing protein [Acinetobacte...  151     2e-50
A0A829HFW3 HTH araC/xylS-type domain-containing protein [Acinetob...  151     3e-50
A8KCK0 HTH AraC-type regulator [Caldimonas brevitalea]                103     9e-32
A0A1Y0B7R6 AraC-family transcriptional regulator [Pseudomonas aer...  100     1e-30
E2D2R1 AraC family transcriptional regulator [Escherichia coli]       81.6    2e-23
B4XH84 AraC [Actinobacillus pleuropneumoniae]                         79.3    1e-22
Q9X950 HTH araC/xylS-type domain-containing protein [Streptomyces...  58.2    5e-15
F8TW81 Putative AraC-type transcription regulator [Sphingomonas s...  48.5    2e-11
Q84H26 DarR [Pseudomonas chlororaphis subsp. aurantiaca]              48.5    2e-11
A0A0U2L6X6 Transcriptional regulator [Paenibacillus ehimensis]        48.1    3e-11
I3RXT0 Transcriptional regulator [Pseudomonas fluorescens]            46.6    1e-10
Q7WUA4 histidine kinase [Porphyromonas gingivalis]                    45.8    2e-10


>A0A7G2SIV0 AraC family transcriptional regulator [Acinetobacter 
sp]
Length=88

 Score = 176 bits (447),  Expect = 6e-63
 Identities = 88/88 (100%), Positives = 88/88 (100%), Gaps = 0/88 (0%)

Query  1   MDELAERVFMSPSTFRQHFREVTGMSPLQYQKQLRLQEARHLMLNHNLDAGRAAISVGYE  60
           MDELAERVFMSPSTFRQHFREVTGMSPLQYQKQLRLQEARHLMLNHNLDAGRAAISVGYE
Sbjct  1   MDELAERVFMSPSTFRQHFREVTGMSPLQYQKQLRLQEARHLMLNHNLDAGRAAISVGYE  60

Query  61  SASQFSREYSRLFGESPQRDIQRIKQNT  88
           SASQFSREYSRLFGESPQRDIQRIKQNT
Sbjct  61  SASQFSREYSRLFGESPQRDIQRIKQNT  88


>Q6FB90 Putative transcriptional regulator (AraC family) [Acinetobacter 
baylyi (strain ATCC 33305 / BD413 / ADP1)]
Length=88

 Score = 176 bits (447),  Expect = 6e-63
 Identities = 88/88 (100%), Positives = 88/88 (100%), Gaps = 0/88 (0%)

Query  1   MDELAERVFMSPSTFRQHFREVTGMSPLQYQKQLRLQEARHLMLNHNLDAGRAAISVGYE  60
           MDELAERVFMSPSTFRQHFREVTGMSPLQYQKQLRLQEARHLMLNHNLDAGRAAISVGYE
Sbjct  1   MDELAERVFMSPSTFRQHFREVTGMSPLQYQKQLRLQEARHLMLNHNLDAGRAAISVGYE  60

Query  61  SASQFSREYSRLFGESPQRDIQRIKQNT  88
           SASQFSREYSRLFGESPQRDIQRIKQNT
Sbjct  61  SASQFSREYSRLFGESPQRDIQRIKQNT  88


>A0A2M8MDQ0 HTH araC/xylS-type domain-containing protein [Acinetobacter 
seifertii]
Length=88

 Score = 165 bits (417),  Expect = 2e-58
 Identities = 82/88 (93%), Positives = 84/88 (95%), Gaps = 0/88 (0%)

Query  1   MDELAERVFMSPSTFRQHFREVTGMSPLQYQKQLRLQEARHLMLNHNLDAGRAAISVGYE  60
           MD+LAER FMSPSTFRQHFREVTGMSPLQYQKQLRLQEARHLMLN NLDAGRAA  VGYE
Sbjct  1   MDDLAERAFMSPSTFRQHFREVTGMSPLQYQKQLRLQEARHLMLNQNLDAGRAASLVGYE  60

Query  61  SASQFSREYSRLFGESPQRDIQRIKQNT  88
           SASQFSREYSRLFGESPQRDIQR+KQNT
Sbjct  61  SASQFSREYSRLFGESPQRDIQRMKQNT  88


>A0A372BP25 AraC family transcriptional regulator [Acinetobacter 
sp. JW]
Length=88

 Score = 164 bits (414),  Expect = 6e-58
 Identities = 81/88 (92%), Positives = 84/88 (95%), Gaps = 0/88 (0%)

Query  1   MDELAERVFMSPSTFRQHFREVTGMSPLQYQKQLRLQEARHLMLNHNLDAGRAAISVGYE  60
           MD+LAE+ FMSPSTFRQHFREVTGMSPLQYQKQLRLQEARHLMLN NLDAGRAA  VGYE
Sbjct  1   MDDLAEKAFMSPSTFRQHFREVTGMSPLQYQKQLRLQEARHLMLNQNLDAGRAASLVGYE  60

Query  61  SASQFSREYSRLFGESPQRDIQRIKQNT  88
           SASQFSREYSRLFGESPQRDIQR+KQNT
Sbjct  61  SASQFSREYSRLFGESPQRDIQRMKQNT  88


>A0A137YN81 AraC family transcriptional regulator [Acinetobacter 
venetianus]
Length=304

 Score = 170 bits (430),  Expect = 1e-57
 Identities = 84/88 (95%), Positives = 86/88 (98%), Gaps = 0/88 (0%)

Query  1    MDELAERVFMSPSTFRQHFREVTGMSPLQYQKQLRLQEARHLMLNHNLDAGRAAISVGYE  60
            MDELAER FMSPSTFRQHFREVTGMSPLQYQK+LRLQEARHLMLNHNLDAGRAA SVGYE
Sbjct  217  MDELAERAFMSPSTFRQHFREVTGMSPLQYQKRLRLQEARHLMLNHNLDAGRAASSVGYE  276

Query  61   SASQFSREYSRLFGESPQRDIQRIKQNT  88
            SASQFSREYSRLFGESPQRDIQR+KQNT
Sbjct  277  SASQFSREYSRLFGESPQRDIQRMKQNT  304


 Score = 16.5 bits (31),  Expect = 3.8
 Identities = 7/26 (27%), Positives = 14/26 (54%), Gaps = 0/26 (0%)

Query  1   MDELAERVFMSPSTFRQHFREVTGMS  26
           +D+L ++V     T   H   ++G+S
Sbjct  12  LDQLIQKVSHLAETEGDHDSIISGLS  37


>A0A653KBH7 HTH araC/xylS-type domain-containing protein [Acinetobacter 
proteolyticus]
Length=303

 Score = 160 bits (405),  Expect = 8e-54
 Identities = 78/87 (90%), Positives = 83/87 (95%), Gaps = 0/87 (0%)

Query  1    MDELAERVFMSPSTFRQHFREVTGMSPLQYQKQLRLQEARHLMLNHNLDAGRAAISVGYE  60
            MD+LAER FMSPSTFRQHFRE+TGMSPLQYQKQLRLQEARHLMLN NLDAGRAA  VGYE
Sbjct  217  MDDLAERAFMSPSTFRQHFREITGMSPLQYQKQLRLQEARHLMLNKNLDAGRAASLVGYE  276

Query  61   SASQFSREYSRLFGESPQRDIQRIKQN  87
            SASQFSREYSRLFGESPQRD+QR+KQ+
Sbjct  277  SASQFSREYSRLFGESPQRDVQRLKQS  303


>A0A7H2Q5G8 AraC family transcriptional regulator [Acinetobacter 
seifertii]
Length=304

 Score = 157 bits (398),  Expect = 1e-52
 Identities = 78/87 (90%), Positives = 81/87 (93%), Gaps = 0/87 (0%)

Query  1    MDELAERVFMSPSTFRQHFREVTGMSPLQYQKQLRLQEARHLMLNHNLDAGRAAISVGYE  60
            MD+LAER FMSPSTFRQHFREVTGMSPLQYQKQLRLQEARHLM N NLDAGRAA  VGYE
Sbjct  217  MDDLAERSFMSPSTFRQHFREVTGMSPLQYQKQLRLQEARHLMFNQNLDAGRAASLVGYE  276

Query  61   SASQFSREYSRLFGESPQRDIQRIKQN  87
            S SQFSREYSRLFGESPQRDIQR+K+N
Sbjct  277  SGSQFSREYSRLFGESPQRDIQRMKKN  303


 Score = 15.4 bits (28),  Expect = 9.4
 Identities = 9/48 (19%), Positives = 23/48 (48%), Gaps = 3/48 (6%)

Query  1   MDELAERVFMSPSTFRQHFREVTGMSPLQYQKQLRLQEARHLMLNHNL  48
           +D+L ++V        +H   ++G+S   +  ++   E+ H + +  L
Sbjct  12  IDQLIQKVSYFAEIEGEHESIISGLS---FHSRMSPTESTHCIYSLGL  56


>N8WH64 HTH araC/xylS-type domain-containing protein [Acinetobacter 
vivianii]
Length=302

 Score = 153 bits (387),  Expect = 4e-51
 Identities = 74/87 (85%), Positives = 81/87 (93%), Gaps = 0/87 (0%)

Query  1    MDELAERVFMSPSTFRQHFREVTGMSPLQYQKQLRLQEARHLMLNHNLDAGRAAISVGYE  60
            MD+LA++ FMSPSTFRQHFR VTGMSPLQYQKQLRLQEARHLM N N+DAGRAA  VGYE
Sbjct  215  MDDLADKAFMSPSTFRQHFRAVTGMSPLQYQKQLRLQEARHLMFNQNIDAGRAAALVGYE  274

Query  61   SASQFSREYSRLFGESPQRDIQRIKQN  87
            SASQFSREYSRLFGESPQRDIQR++Q+
Sbjct  275  SASQFSREYSRLFGESPQRDIQRMRQS  301


>N9K2V9 HTH araC/xylS-type domain-containing protein [Acinetobacter 
sp. ANC 3929]
Length=302

 Score = 152 bits (383),  Expect = 2e-50
 Identities = 74/86 (86%), Positives = 80/86 (93%), Gaps = 0/86 (0%)

Query  1    MDELAERVFMSPSTFRQHFREVTGMSPLQYQKQLRLQEARHLMLNHNLDAGRAAISVGYE  60
            MD+LA++ FMSPSTFRQHFR VTGMSPLQYQKQLRLQEARHLM N N+DAGRAA  VGYE
Sbjct  215  MDDLADKAFMSPSTFRQHFRAVTGMSPLQYQKQLRLQEARHLMFNQNIDAGRAAGLVGYE  274

Query  61   SASQFSREYSRLFGESPQRDIQRIKQ  86
            SASQFSREYSRLFGESPQRDIQR++Q
Sbjct  275  SASQFSREYSRLFGESPQRDIQRMRQ  300


>A0A0B0KM12 Transcriptional regulator, AraC family [Acinetobacter 
sp. neg1]
Length=302

 Score = 151 bits (382),  Expect = 2e-50
 Identities = 74/86 (86%), Positives = 80/86 (93%), Gaps = 0/86 (0%)

Query  1    MDELAERVFMSPSTFRQHFREVTGMSPLQYQKQLRLQEARHLMLNHNLDAGRAAISVGYE  60
            MD+LA++ FMSPSTFRQHFR VTGMSPLQYQKQLRLQEARHLM N N+DAGRAA  VGYE
Sbjct  215  MDDLADKAFMSPSTFRQHFRAVTGMSPLQYQKQLRLQEARHLMFNQNVDAGRAAGLVGYE  274

Query  61   SASQFSREYSRLFGESPQRDIQRIKQ  86
            SASQFSREYSRLFGESPQRDIQR++Q
Sbjct  275  SASQFSREYSRLFGESPQRDIQRMRQ  300


>N9PZR8 HTH araC/xylS-type domain-containing protein [Acinetobacter 
vivianii]
Length=302

 Score = 151 bits (382),  Expect = 2e-50
 Identities = 74/86 (86%), Positives = 80/86 (93%), Gaps = 0/86 (0%)

Query  1    MDELAERVFMSPSTFRQHFREVTGMSPLQYQKQLRLQEARHLMLNHNLDAGRAAISVGYE  60
            MD+LA++ FMSPSTFRQHFR VTGMSPLQYQKQLRLQEARHLM N N+DAGRAA  VGYE
Sbjct  215  MDDLADKAFMSPSTFRQHFRAVTGMSPLQYQKQLRLQEARHLMFNQNVDAGRAAGLVGYE  274

Query  61   SASQFSREYSRLFGESPQRDIQRIKQ  86
            SASQFSREYSRLFGESPQRDIQR++Q
Sbjct  275  SASQFSREYSRLFGESPQRDIQRMRQ  300


>A0A3N4RHJ1 AraC family transcriptional regulator [Acinetobacter 
sp. BIGb0102]
Length=302

 Score = 151 bits (382),  Expect = 2e-50
 Identities = 74/86 (86%), Positives = 80/86 (93%), Gaps = 0/86 (0%)

Query  1    MDELAERVFMSPSTFRQHFREVTGMSPLQYQKQLRLQEARHLMLNHNLDAGRAAISVGYE  60
            MD+LA++ FMSPSTFRQHFR VTGMSPLQYQKQLRLQEARHLM N N+DAGRAA  VGYE
Sbjct  215  MDDLADKAFMSPSTFRQHFRAVTGMSPLQYQKQLRLQEARHLMFNQNVDAGRAAGLVGYE  274

Query  61   SASQFSREYSRLFGESPQRDIQRIKQ  86
            SASQFSREYSRLFGESPQRDIQR++Q
Sbjct  275  SASQFSREYSRLFGESPQRDIQRMRQ  300


>N9P4G3 HTH araC/xylS-type domain-containing protein [Acinetobacter 
sp. CIP 64.2]
Length=302

 Score = 151 bits (382),  Expect = 2e-50
 Identities = 74/86 (86%), Positives = 80/86 (93%), Gaps = 0/86 (0%)

Query  1    MDELAERVFMSPSTFRQHFREVTGMSPLQYQKQLRLQEARHLMLNHNLDAGRAAISVGYE  60
            MD+LA++ FMSPSTFRQHFR VTGMSPLQYQKQLRLQEARHLM N N+DAGRAA  VGYE
Sbjct  215  MDDLADKAFMSPSTFRQHFRAVTGMSPLQYQKQLRLQEARHLMFNQNVDAGRAAGLVGYE  274

Query  61   SASQFSREYSRLFGESPQRDIQRIKQ  86
            SASQFSREYSRLFGESPQRDIQR++Q
Sbjct  275  SASQFSREYSRLFGESPQRDIQRMRQ  300


>A0A829HFW3 HTH araC/xylS-type domain-containing protein [Acinetobacter 
gyllenbergii CIP 110306 = MTCC 11365]
Length=302

 Score = 151 bits (381),  Expect = 3e-50
 Identities = 74/86 (86%), Positives = 80/86 (93%), Gaps = 0/86 (0%)

Query  1    MDELAERVFMSPSTFRQHFREVTGMSPLQYQKQLRLQEARHLMLNHNLDAGRAAISVGYE  60
            MD+LA++ FMSPSTFRQHFR VTGMSPLQYQKQLRLQEARHLM N N+DAGRAA  VGYE
Sbjct  215  MDDLADQAFMSPSTFRQHFRAVTGMSPLQYQKQLRLQEARHLMFNQNVDAGRAAGLVGYE  274

Query  61   SASQFSREYSRLFGESPQRDIQRIKQ  86
            SASQFSREYSRLFGESPQRDIQR++Q
Sbjct  275  SASQFSREYSRLFGESPQRDIQRMRQ  300


>A8KCK0 HTH AraC-type regulator [Caldimonas brevitalea]
Length=322

 Score = 103 bits (258),  Expect = 9e-32
 Identities = 51/80 (64%), Positives = 62/80 (78%), Gaps = 0/80 (0%)

Query  1    MDELAERVFMSPSTFRQHFREVTGMSPLQYQKQLRLQEARHLMLNHNLDAGRAAISVGYE  60
            +DELA    MS S+   HFR +T MSPLQYQKQLRLQEAR LML+  ++  +AA +VGYE
Sbjct  232  VDELARCCCMSTSSLHHHFRVLTSMSPLQYQKQLRLQEARRLMLSEGIEVSKAAYTVGYE  291

Query  61   SASQFSREYSRLFGESPQRD  80
            SASQFSREYSRL+G +P +D
Sbjct  292  SASQFSREYSRLYGIAPSKD  311


>A0A1Y0B7R6 AraC-family transcriptional regulator [Pseudomonas 
aeruginosa]
Length=310

 Score = 100 bits (250),  Expect = 1e-30
 Identities = 50/85 (59%), Positives = 61/85 (72%), Gaps = 0/85 (0%)

Query  1    MDELAERVFMSPSTFRQHFREVTGMSPLQYQKQLRLQEARHLMLNHNLDAGRAAISVGYE  60
            +++LA+ V +SPST    F+ VT MSPLQYQKQLRLQEAR L+ +  L+   A   VGYE
Sbjct  223  IEQLAQVVNLSPSTLHHRFKAVTAMSPLQYQKQLRLQEARRLIFSEGLEVAAAGYRVGYE  282

Query  61   SASQFSREYSRLFGESPQRDIQRIK  85
            S SQFSREYSRLFG  P RD+ R +
Sbjct  283  SPSQFSREYSRLFGAPPLRDLARAR  307


>E2D2R1 AraC family transcriptional regulator [Escherichia coli]
Length=318

 Score = 81.6 bits (200),  Expect = 2e-23
 Identities = 40/85 (47%), Positives = 56/85 (66%), Gaps = 0/85 (0%)

Query  1    MDELAERVFMSPSTFRQHFREVTGMSPLQYQKQLRLQEARHLMLNHNLDAGRAAISVGYE  60
            +++LA    MS S F  +F+ VT  SPLQY K  RL +AR ++++  + A  AA+ VGYE
Sbjct  229  VEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYE  288

Query  61   SASQFSREYSRLFGESPQRDIQRIK  85
            SASQFSRE+ R FG +P  D  R++
Sbjct  289  SASQFSREFKRYFGVTPGEDAARMR  313


 Score = 16.2 bits (30),  Expect = 5.2
 Identities = 6/23 (26%), Positives = 12/23 (52%), Gaps = 0/23 (0%)

Query  55  ISVGYESASQFSREYSRLFGESP  77
           + +   S S+   +   L+GE+P
Sbjct  36  LKIKENSLSELLPDVRLLYGETP  58


>B4XH84 AraC [Actinobacillus pleuropneumoniae]
Length=284

 Score = 79.3 bits (194),  Expect = 1e-22
 Identities = 41/80 (51%), Positives = 52/80 (65%), Gaps = 0/80 (0%)

Query  1    MDELAERVFMSPSTFRQHFREVTGMSPLQYQKQLRLQEARHLMLNHNLDAGRAAISVGYE  60
            +D+LA++  MS S F  HF+++T MSPLQYQK  RL  A+ L+     +    A  VGYE
Sbjct  203  VDDLAKQAGMSVSGFHSHFKKMTNMSPLQYQKSHRLLAAQRLIQAKQSNIASVAFQVGYE  262

Query  61   SASQFSREYSRLFGESPQRD  80
            S SQFSREY R FG SP+ D
Sbjct  263  SPSQFSREYKRHFGVSPKGD  282


 Score = 15.4 bits (28),  Expect = 9.4
 Identities = 9/33 (27%), Positives = 13/33 (39%), Gaps = 0/33 (0%)

Query  17  QHFREVTGMSPLQYQKQLRLQEARHLMLNHNLD  49
           QHF       PL  +      E  +LM+   +D
Sbjct  66  QHFMFCPVNVPLSVEVVEASPEKPYLMMTMKID  98


>Q9X950 HTH araC/xylS-type domain-containing protein [Streptomyces 
coelicolor]
Length=233

 Score = 58.2 bits (139),  Expect = 5e-15
 Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 0/77 (0%)

Query  1    MDELAERVFMSPSTFRQHFREVTGMSPLQYQKQLRLQEARHLMLNHNLDAGRAAISVGYE  60
            +DELA    MS  TF + FRE TG+SP ++  Q RL+ ARHL+ + +L   R A  VG+ 
Sbjct  145  LDELAAHAAMSTRTFARRFREETGLSPGRWLTQQRLRRARHLLESSDLPVERVAHEVGFA  204

Query  61   SASQFSREYSRLFGESP  77
            +A+   R  +   G +P
Sbjct  205  TATSLRRHLAAEAGVAP  221


>F8TW81 Putative AraC-type transcription regulator [Sphingomonas 
sp. TTNP3]
Length=281

 Score = 48.5 bits (114),  Expect = 2e-11
 Identities = 26/77 (34%), Positives = 41/77 (53%), Gaps = 1/77 (1%)

Query  1    MDELAERVFMSPSTFRQHFREVTGMSPLQYQKQLRLQEARHLMLNHNLDAGRAAISVGYE  60
            +D+LAE V +SP  F + F+  TG +P QY  ++R+  ARHL+   +L     A   G+ 
Sbjct  197  IDDLAEAVGLSPIHFARQFKRSTGKAPHQYLIEMRVSRARHLLAG-DLPIAEIAYRCGFS  255

Query  61   SASQFSREYSRLFGESP  77
                 +R + R  G +P
Sbjct  256  HQEHLTRLFGRQQGTTP  272


 Score = 15.8 bits (29),  Expect = 6.9
 Identities = 6/13 (46%), Positives = 8/13 (62%), Gaps = 0/13 (0%)

Query  61  SASQFSREYSRLF  73
           ++ QF R YS  F
Sbjct  21  ASHQFERPYSDRF  33


>Q84H26 DarR [Pseudomonas chlororaphis subsp. aurantiaca]
Length=330

 Score = 48.5 bits (114),  Expect = 2e-11
 Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 0/75 (0%)

Query  4    LAERVFMSPSTFRQHFREVTGMSPLQYQKQLRLQEARHLMLNHNLDAGRAAISVGYESAS  63
            LA +V MS  +F +H+R  TG +P +  +Q+R++ AR L+ +  +   R A+  G+ S  
Sbjct  241  LAAQVGMSERSFVRHYRADTGQTPARVIEQIRVENARRLLGDSCVPIKRIAVQCGFGSEE  300

Query  64   QFSREYSRLFGESPQ  78
               R + R  G +PQ
Sbjct  301  TLRRSFLRAMGVTPQ  315


 Score = 22.3 bits (46),  Expect = 0.038
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query  44   LNHNLDAGRAAISVGYESASQFSREYSRLFGESPQRDIQRIK  85
            L  +L+    A  VG    S F R Y    G++P R I++I+
Sbjct  232  LGRDLNIPTLAAQVGMSERS-FVRHYRADTGQTPARVIEQIR  272


>A0A0U2L6X6 Transcriptional regulator [Paenibacillus ehimensis]
Length=269

 Score = 48.1 bits (113),  Expect = 3e-11
 Identities = 22/79 (28%), Positives = 44/79 (56%), Gaps = 0/79 (0%)

Query  1    MDELAERVFMSPSTFRQHFREVTGMSPLQYQKQLRLQEARHLMLNHNLDAGRAAISVGYE  60
            M+ LA  V+ S   F + F +  G++P QY  +LR+++A+  ++         + S+G+ 
Sbjct  182  MERLASLVYQSKFHFIRSFTQTVGVTPYQYILRLRIEQAKEQLVRTRASVTEISYSLGFS  241

Query  61   SASQFSREYSRLFGESPQR  79
            S SQ  R +++  G +P++
Sbjct  242  SPSQLYRAFAKATGVTPEQ  260


 Score = 26.6 bits (57),  Expect = 0.001
 Identities = 11/24 (46%), Positives = 16/24 (67%), Gaps = 0/24 (0%)

Query  9    FMSPSTFRQHFREVTGMSPLQYQK  32
            F SPS   + F + TG++P QY+K
Sbjct  240  FSSPSQLYRAFAKATGVTPEQYRK  263


>I3RXT0 Transcriptional regulator [Pseudomonas fluorescens]
Length=325

 Score = 46.6 bits (109),  Expect = 1e-10
 Identities = 25/75 (33%), Positives = 41/75 (55%), Gaps = 0/75 (0%)

Query  4    LAERVFMSPSTFRQHFREVTGMSPLQYQKQLRLQEARHLMLNHNLDAGRAAISVGYESAS  63
            LAE+  MS  +F +H+R  TG +P +  +++R++ AR L+    L   R A+  G+ S  
Sbjct  240  LAEQAGMSERSFVRHYRADTGQTPARAIERIRVESARRLLGESGLAIKRIAMQCGFGSEE  299

Query  64   QFSREYSRLFGESPQ  78
               R + R  G +PQ
Sbjct  300  TLRRSFLRGVGVTPQ  314


 Score = 21.9 bits (45),  Expect = 0.052
 Identities = 10/25 (40%), Positives = 14/25 (56%), Gaps = 0/25 (0%)

Query  61   SASQFSREYSRLFGESPQRDIQRIK  85
            S   F R Y    G++P R I+RI+
Sbjct  247  SERSFVRHYRADTGQTPARAIERIR  271


 Score = 18.1 bits (35),  Expect = 1.1
 Identities = 9/23 (39%), Positives = 13/23 (57%), Gaps = 0/23 (0%)

Query  34   LRLQEARHLMLNHNLDAGRAAIS  56
            L L+ ARHL++      G+A  S
Sbjct  186  LALEVARHLVVFLKRPGGQAQFS  208


>Q7WUA4 histidine kinase [Porphyromonas gingivalis]
Length=961

 Score = 45.8 bits (107),  Expect = 2e-10
 Identities = 23/82 (28%), Positives = 44/82 (54%), Gaps = 0/82 (0%)

Query  3    ELAERVFMSPSTFRQHFREVTGMSPLQYQKQLRLQEARHLMLNHNLDAGRAAISVGYESA  62
            +LAE++ MSPS   +    V G S + Y +Q++++ A  L+ + + +    +I  G+   
Sbjct  869  DLAEKMCMSPSQLNRKLTSVVGCSTIGYIQQIKIKLACKLLADESKNISDISIEAGFSDP  928

Query  63   SQFSREYSRLFGESPQRDIQRI  84
            + FSR + R    SP +  Q++
Sbjct  929  AYFSRTFKRYMNCSPSQYRQKL  950


 Score = 15.8 bits (29),  Expect = 7.4
 Identities = 6/14 (43%), Positives = 8/14 (57%), Gaps = 0/14 (0%)

Query  11   SPSTFRQHFREVTG  24
            SPS +RQ    + G
Sbjct  942  SPSQYRQKLLAMPG  955



Lambda      K        H        a         alpha
   0.327    0.135    0.385    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 318344


  Database: d85626dd93e730b5a940d5740f1d493c.TrEMBL.fasta
    Posted date:  May 11, 2024  2:31 PM
  Number of letters in database: 7,010
  Number of sequences in database:  24



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40