BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 59568ca55365ae8b8955705f56e33baa.SwissProt.fasta
           1 sequences; 108 total letters



Query= ACIAD1845

Length=142
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

C5DY20 Biogenesis of lysosome-related organelles complex 1 subuni...  31.6    5e-07


>C5DY20 Biogenesis of lysosome-related organelles complex 1 subunit 
CNL1 [Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 
732 / NBRC 1130 / NCYC 568 / NRRL Y-229)]
Length=108

 Score = 31.6 bits (70),  Expect = 5e-07
 Identities = 15/52 (29%), Positives = 29/52 (56%), Gaps = 7/52 (13%)

Query  55   KDFLNGVVQNKLKHSQELITKKQK-------QPKENSVIPTFEHKIANVLKN  99
            KD +NG+V   +KH +E++TK +K         + N +   F+ ++A V ++
Sbjct  50   KDIVNGIVDENIKHFREILTKCEKLENYFDMLDQINMITENFKTRLAQVARD  101


 Score = 17.3 bits (33),  Expect = 0.050
 Identities = 7/22 (32%), Positives = 11/22 (50%), Gaps = 0/22 (0%)

Query  6   CELINKIQDFDKNIHQLTEVYK  27
           CE +    D    I+ +TE +K
Sbjct  71  CEKLENYFDMLDQINMITENFK  92



Lambda      K        H        a         alpha
   0.322    0.136    0.391    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 12032


  Database: 59568ca55365ae8b8955705f56e33baa.SwissProt.fasta
    Posted date:  May 20, 2024  7:36 PM
  Number of letters in database: 108
  Number of sequences in database:  1



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40