BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: ded4648219a58d9799e9d6817f9b60bf.TrEMBL.fasta
11 sequences; 1,154 total letters
Query= ACIAD1846
Length=105
Score E
Sequences producing significant alignments: (Bits) Value
Q6FB73 Uncharacterized protein [Acinetobacter baylyi (strain ATCC... 214 3e-78
A0A7G2SAG6 Single-stranded DNA-binding protein [Acinetobacter sp] 214 3e-78
A0A836Z423 Single-stranded DNA-binding protein [Acinetobacter nos... 192 2e-69
N9PRB1 Single-stranded DNA-binding protein [Acinetobacter colisti... 187 2e-67
A0A4Q6XK17 Single-stranded DNA-binding protein [Acinetobacter hal... 187 2e-67
N9PMQ9 Uncharacterized protein [Acinetobacter sp. CIP 64.2] 186 5e-67
A0A3S0UN62 Single-stranded DNA-binding protein [Acinetobacter sp] 186 7e-67
C0VNX3 Single-stranded DNA-binding protein [Acinetobacter sp. (st... 185 1e-66
A0A6A8B9W0 Single-stranded DNA-binding protein [Acinetobacter hae... 185 1e-66
N9PL99 Uncharacterized protein [Acinetobacter colistiniresistens] 184 3e-66
G7GH47 Uncharacterized protein [Acinetobacter sp. NBRC 100985] 184 4e-66
>Q6FB73 Uncharacterized protein [Acinetobacter baylyi (strain
ATCC 33305 / BD413 / ADP1)]
Length=104
Score = 214 bits (545), Expect = 3e-78
Identities = 104/104 (100%), Positives = 104/104 (100%), Gaps = 0/104 (0%)
Query 1 MHTSKVKILGAKAVDFKPSDGSNRHYDHVALYCEIPMDLSQGNAIGNGCETFNWQDSSNI 60
MHTSKVKILGAKAVDFKPSDGSNRHYDHVALYCEIPMDLSQGNAIGNGCETFNWQDSSNI
Sbjct 1 MHTSKVKILGAKAVDFKPSDGSNRHYDHVALYCEIPMDLSQGNAIGNGCETFNWQDSSNI 60
Query 61 ALLRQFKQSDFPIEADITFDMVTTGKSIKYVVVSVELPQPKKII 104
ALLRQFKQSDFPIEADITFDMVTTGKSIKYVVVSVELPQPKKII
Sbjct 61 ALLRQFKQSDFPIEADITFDMVTTGKSIKYVVVSVELPQPKKII 104
>A0A7G2SAG6 Single-stranded DNA-binding protein [Acinetobacter
sp]
Length=104
Score = 214 bits (545), Expect = 3e-78
Identities = 104/104 (100%), Positives = 104/104 (100%), Gaps = 0/104 (0%)
Query 1 MHTSKVKILGAKAVDFKPSDGSNRHYDHVALYCEIPMDLSQGNAIGNGCETFNWQDSSNI 60
MHTSKVKILGAKAVDFKPSDGSNRHYDHVALYCEIPMDLSQGNAIGNGCETFNWQDSSNI
Sbjct 1 MHTSKVKILGAKAVDFKPSDGSNRHYDHVALYCEIPMDLSQGNAIGNGCETFNWQDSSNI 60
Query 61 ALLRQFKQSDFPIEADITFDMVTTGKSIKYVVVSVELPQPKKII 104
ALLRQFKQSDFPIEADITFDMVTTGKSIKYVVVSVELPQPKKII
Sbjct 61 ALLRQFKQSDFPIEADITFDMVTTGKSIKYVVVSVELPQPKKII 104
>A0A836Z423 Single-stranded DNA-binding protein [Acinetobacter
nosocomialis]
Length=106
Score = 192 bits (488), Expect = 2e-69
Identities = 89/100 (89%), Positives = 96/100 (96%), Gaps = 0/100 (0%)
Query 1 MHTSKVKILGAKAVDFKPSDGSNRHYDHVALYCEIPMDLSQGNAIGNGCETFNWQDSSNI 60
MHTSKVKILGAKAVDFKP+DGS RHYDHVALYC++PMDLSQGNAIGNGCETFNWQDSSNI
Sbjct 1 MHTSKVKILGAKAVDFKPTDGSGRHYDHVALYCQVPMDLSQGNAIGNGCETFNWQDSSNI 60
Query 61 ALLRQFKQSDFPIEADITFDMVTTGKSIKYVVVSVELPQP 100
ALLR+FKQSDFPIEADITFDMVT+GK +KYVVV V+LP P
Sbjct 61 ALLRKFKQSDFPIEADITFDMVTSGKGVKYVVVDVQLPTP 100
>N9PRB1 Single-stranded DNA-binding protein [Acinetobacter colistiniresistens]
Length=105
Score = 187 bits (475), Expect = 2e-67
Identities = 88/104 (85%), Positives = 96/104 (92%), Gaps = 0/104 (0%)
Query 1 MHTSKVKILGAKAVDFKPSDGSNRHYDHVALYCEIPMDLSQGNAIGNGCETFNWQDSSNI 60
MHTSKVKILGAKAVDFKP+DGS RHYDHVALYC+IPMDLSQGN+IGNGCETFNWQDSSNI
Sbjct 1 MHTSKVKILGAKAVDFKPTDGSGRHYDHVALYCQIPMDLSQGNSIGNGCETFNWQDSSNI 60
Query 61 ALLRQFKQSDFPIEADITFDMVTTGKSIKYVVVSVELPQPKKII 104
ALLRQFKQ+DFPIEA+ITFDMVT+GK +KYVV V+LP K I
Sbjct 61 ALLRQFKQADFPIEAEITFDMVTSGKGVKYVVCDVKLPAVPKAI 104
>A0A4Q6XK17 Single-stranded DNA-binding protein [Acinetobacter
halotolerans]
Length=105
Score = 187 bits (474), Expect = 2e-67
Identities = 89/102 (87%), Positives = 93/102 (91%), Gaps = 0/102 (0%)
Query 1 MHTSKVKILGAKAVDFKPSDGSNRHYDHVALYCEIPMDLSQGNAIGNGCETFNWQDSSNI 60
MHTSKVKILGAKAVDFKP D S RHYDHVALYCEIPMDLSQG AIGNGCETFNWQDSSN+
Sbjct 1 MHTSKVKILGAKAVDFKPDDKSGRHYDHVALYCEIPMDLSQGTAIGNGCETFNWQDSSNM 60
Query 61 ALLRQFKQSDFPIEADITFDMVTTGKSIKYVVVSVELPQPKK 102
A LRQFKQ DFPIEADITFDMVTTGK++KYVVV V+LP P K
Sbjct 61 AQLRQFKQKDFPIEADITFDMVTTGKAMKYVVVDVKLPTPPK 102
>N9PMQ9 Uncharacterized protein [Acinetobacter sp. CIP 64.2]
Length=106
Score = 186 bits (472), Expect = 5e-67
Identities = 86/100 (86%), Positives = 94/100 (94%), Gaps = 0/100 (0%)
Query 1 MHTSKVKILGAKAVDFKPSDGSNRHYDHVALYCEIPMDLSQGNAIGNGCETFNWQDSSNI 60
MHTSKVKILGAKAVDFKP+DGS RHYDHVALYC+IPMDLSQGN+IGNGCETFNWQDSSNI
Sbjct 1 MHTSKVKILGAKAVDFKPTDGSGRHYDHVALYCQIPMDLSQGNSIGNGCETFNWQDSSNI 60
Query 61 ALLRQFKQSDFPIEADITFDMVTTGKSIKYVVVSVELPQP 100
ALLR FKQ+DFPIEA+ITFDMVT+GK +KYVV V+LP P
Sbjct 61 ALLRHFKQADFPIEAEITFDMVTSGKGVKYVVCDVKLPTP 100
>A0A3S0UN62 Single-stranded DNA-binding protein [Acinetobacter
sp]
Length=104
Score = 186 bits (471), Expect = 7e-67
Identities = 86/103 (83%), Positives = 95/103 (92%), Gaps = 0/103 (0%)
Query 1 MHTSKVKILGAKAVDFKPSDGSNRHYDHVALYCEIPMDLSQGNAIGNGCETFNWQDSSNI 60
MHTS VKILGAKAVDFKP+DGS RHYDHV L+C+IPMDLSQGNAIGNGCETFNWQDS+NI
Sbjct 1 MHTSIVKILGAKAVDFKPTDGSGRHYDHVQLFCQIPMDLSQGNAIGNGCETFNWQDSANI 60
Query 61 ALLRQFKQSDFPIEADITFDMVTTGKSIKYVVVSVELPQPKKI 103
ALLR+FKQSDFP+EA ITFDMVT+GK +KYVV VELPQP K+
Sbjct 61 ALLRKFKQSDFPLEAKITFDMVTSGKGVKYVVCDVELPQPTKV 103
>C0VNX3 Single-stranded DNA-binding protein [Acinetobacter sp.
(strain ATCC 27244 / 9458)]
Length=105
Score = 185 bits (470), Expect = 1e-66
Identities = 88/98 (90%), Positives = 92/98 (94%), Gaps = 0/98 (0%)
Query 1 MHTSKVKILGAKAVDFKPSDGSNRHYDHVALYCEIPMDLSQGNAIGNGCETFNWQDSSNI 60
MHTSKVKILGAKAVDFKP D S RHYDHVALYCEIPMDLSQG AIGNGCETFNWQDSSN+
Sbjct 1 MHTSKVKILGAKAVDFKPDDKSGRHYDHVALYCEIPMDLSQGTAIGNGCETFNWQDSSNM 60
Query 61 ALLRQFKQSDFPIEADITFDMVTTGKSIKYVVVSVELP 98
ALLRQFKQ DFPIEADITFDMVTTGK++KYVVV V+LP
Sbjct 61 ALLRQFKQKDFPIEADITFDMVTTGKAMKYVVVDVKLP 98
>A0A6A8B9W0 Single-stranded DNA-binding protein [Acinetobacter
haemolyticus]
Length=105
Score = 185 bits (470), Expect = 1e-66
Identities = 88/98 (90%), Positives = 92/98 (94%), Gaps = 0/98 (0%)
Query 1 MHTSKVKILGAKAVDFKPSDGSNRHYDHVALYCEIPMDLSQGNAIGNGCETFNWQDSSNI 60
MHTSKVKILGAKAVDFKP D S RHYDHVALYCEIPMDLSQG AIGNGCETFNWQDSSN+
Sbjct 1 MHTSKVKILGAKAVDFKPDDKSGRHYDHVALYCEIPMDLSQGTAIGNGCETFNWQDSSNM 60
Query 61 ALLRQFKQSDFPIEADITFDMVTTGKSIKYVVVSVELP 98
ALLRQFKQ DFPIEADITFDMVTTGK++KYVVV V+LP
Sbjct 61 ALLRQFKQKDFPIEADITFDMVTTGKAMKYVVVDVKLP 98
>N9PL99 Uncharacterized protein [Acinetobacter colistiniresistens]
Length=105
Score = 184 bits (467), Expect = 3e-66
Identities = 86/104 (83%), Positives = 95/104 (91%), Gaps = 0/104 (0%)
Query 1 MHTSKVKILGAKAVDFKPSDGSNRHYDHVALYCEIPMDLSQGNAIGNGCETFNWQDSSNI 60
MHTSKVKILGAKAVDFKP+DGS RHYDHVAL+C+IPMDLSQGN IGNGCETFNWQDSSNI
Sbjct 1 MHTSKVKILGAKAVDFKPTDGSGRHYDHVALFCQIPMDLSQGNCIGNGCETFNWQDSSNI 60
Query 61 ALLRQFKQSDFPIEADITFDMVTTGKSIKYVVVSVELPQPKKII 104
+LLRQFKQ+DFPIEA+ITFDMVT+GK +KYVV V+LP K I
Sbjct 61 SLLRQFKQADFPIEAEITFDMVTSGKGVKYVVCDVKLPAVPKAI 104
>G7GH47 Uncharacterized protein [Acinetobacter sp. NBRC 100985]
Length=105
Score = 184 bits (466), Expect = 4e-66
Identities = 88/104 (85%), Positives = 93/104 (89%), Gaps = 0/104 (0%)
Query 1 MHTSKVKILGAKAVDFKPSDGSNRHYDHVALYCEIPMDLSQGNAIGNGCETFNWQDSSNI 60
MHTS VKILGAKAVDFKP D S RHYDHVALYCEIPMDLS G AIGNGCETFNWQDSSN+
Sbjct 1 MHTSTVKILGAKAVDFKPDDKSGRHYDHVALYCEIPMDLSTGMAIGNGCETFNWQDSSNM 60
Query 61 ALLRQFKQSDFPIEADITFDMVTTGKSIKYVVVSVELPQPKKII 104
ALLRQFKQSDFPI ADITFDMVTTGK++KYVVV V+LP P K +
Sbjct 61 ALLRQFKQSDFPITADITFDMVTTGKAMKYVVVDVKLPTPPKAV 104
Lambda K H a alpha
0.324 0.138 0.418 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 68572
Database: ded4648219a58d9799e9d6817f9b60bf.TrEMBL.fasta
Posted date: Jun 3, 2024 7:49 PM
Number of letters in database: 1,154
Number of sequences in database: 11
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40