Comparative Genomics

ACIAD1848 / TrEMBL Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 580197efa23c5bb2202395794899433c.TrEMBL.fasta
           11 sequences; 878 total letters



Query= ACIAD1848

Length=96
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q6FB71 Uncharacterized protein [Acinetobacter baylyi (strain ATCC...  195     4e-71
A0A7G2SB71 Uncharacterized protein [Acinetobacter sp]                 195     4e-71
A0A0D5YIG7 Uncharacterized protein [Acinetobacter baumannii]          126     8e-44
A0A4Q7AKX6 Uncharacterized protein [Acinetobacter bouvetii]           123     1e-42
A0A2L1VGJ1 Uncharacterized protein [Acinetobacter nosocomialis]       118     9e-41
A0A2L0HYZ6 Uncharacterized protein [Acinetobacter sp. ACNIH2]         117     2e-40
A0A5C0U7F7 Uncharacterized protein [Acinetobacter johnsonii]          116     4e-40
A0A5N5XXZ1 Uncharacterized protein [Acinetobacter baumannii]          115     1e-39
A0A7U5LZY5 Uncharacterized protein [Acinetobacter baumannii (stra...  115     1e-39
A0A5K1MML4 Uncharacterized protein [Acinetobacter baumannii NIPH ...  115     1e-39
A0A7U5GMN0 Uncharacterized protein [Acinetobacter baumannii]          115     1e-39


>Q6FB71 Uncharacterized protein [Acinetobacter baylyi (strain 
ATCC 33305 / BD413 / ADP1)]
Length=95

 Score = 195 bits (496),  Expect = 4e-71
 Identities = 94/95 (99%), Positives = 95/95 (100%), Gaps = 0/95 (0%)

Query  1   LTQCFMVTFVQLCFSVSGCQIMINDKEQAFEFVAKIIFDRAVQLIIGGNPAYESELVLSH  60
           +TQCFMVTFVQLCFSVSGCQIMINDKEQAFEFVAKIIFDRAVQLIIGGNPAYESELVLSH
Sbjct  1   MTQCFMVTFVQLCFSVSGCQIMINDKEQAFEFVAKIIFDRAVQLIIGGNPAYESELVLSH  60

Query  61  IEMTMAEWGYRSPKVAVYCDSIKSENDKFREMGIC  95
           IEMTMAEWGYRSPKVAVYCDSIKSENDKFREMGIC
Sbjct  61  IEMTMAEWGYRSPKVAVYCDSIKSENDKFREMGIC  95


>A0A7G2SB71 Uncharacterized protein [Acinetobacter sp]
Length=95

 Score = 195 bits (496),  Expect = 4e-71
 Identities = 94/95 (99%), Positives = 95/95 (100%), Gaps = 0/95 (0%)

Query  1   LTQCFMVTFVQLCFSVSGCQIMINDKEQAFEFVAKIIFDRAVQLIIGGNPAYESELVLSH  60
           +TQCFMVTFVQLCFSVSGCQIMINDKEQAFEFVAKIIFDRAVQLIIGGNPAYESELVLSH
Sbjct  1   MTQCFMVTFVQLCFSVSGCQIMINDKEQAFEFVAKIIFDRAVQLIIGGNPAYESELVLSH  60

Query  61  IEMTMAEWGYRSPKVAVYCDSIKSENDKFREMGIC  95
           IEMTMAEWGYRSPKVAVYCDSIKSENDKFREMGIC
Sbjct  61  IEMTMAEWGYRSPKVAVYCDSIKSENDKFREMGIC  95


>A0A0D5YIG7 Uncharacterized protein [Acinetobacter baumannii]
Length=96

 Score = 126 bits (317),  Expect = 8e-44
 Identities = 61/80 (76%), Positives = 65/80 (81%), Gaps = 0/80 (0%)

Query  16  VSGCQIMINDKEQAFEFVAKIIFDRAVQLIIGGNPAYESELVLSHIEMTMAEWGYRSPKV  75
           +  C  +   KEQAFE VAK IFDRAVQLIIGGNPAYESELVL HIEMTM EWGY+S KV
Sbjct  17  IVACDAVAMGKEQAFEIVAKNIFDRAVQLIIGGNPAYESELVLFHIEMTMVEWGYKSAKV  76

Query  76  AVYCDSIKSENDKFREMGIC  95
           A YCDSIK+END FR MGIC
Sbjct  77  AEYCDSIKAENDNFRSMGIC  96


>A0A4Q7AKX6 Uncharacterized protein [Acinetobacter bouvetii]
Length=84

 Score = 123 bits (308),  Expect = 1e-42
 Identities = 60/77 (78%), Positives = 64/77 (83%), Gaps = 0/77 (0%)

Query  19  CQIMINDKEQAFEFVAKIIFDRAVQLIIGGNPAYESELVLSHIEMTMAEWGYRSPKVAVY  78
           C  +  +KEQAFE VAKIIFDRAVQLIIGGNPA+ESELVL HIE TM EWGYRS  VA Y
Sbjct  8   CDKLQMEKEQAFEIVAKIIFDRAVQLIIGGNPAFESELVLFHIENTMTEWGYRSALVAEY  67

Query  79  CDSIKSENDKFREMGIC  95
           CD+IKSEND FR MGIC
Sbjct  68  CDNIKSENDNFRSMGIC  84


>A0A2L1VGJ1 Uncharacterized protein [Acinetobacter nosocomialis]
Length=72

 Score = 118 bits (295),  Expect = 9e-41
 Identities = 57/71 (80%), Positives = 61/71 (86%), Gaps = 0/71 (0%)

Query  25  DKEQAFEFVAKIIFDRAVQLIIGGNPAYESELVLSHIEMTMAEWGYRSPKVAVYCDSIKS  84
           +KE AFE VAKIIFDRAVQLIIGGNPAYESELVL HIEMTM EWGY+S KVA Y D +K+
Sbjct  2   EKELAFEIVAKIIFDRAVQLIIGGNPAYESELVLFHIEMTMVEWGYKSAKVAEYYDMLKA  61

Query  85  ENDKFREMGIC  95
           END FR MGIC
Sbjct  62  ENDNFRSMGIC  72


>A0A2L0HYZ6 Uncharacterized protein [Acinetobacter sp. ACNIH2]
Length=72

 Score = 117 bits (293),  Expect = 2e-40
 Identities = 54/71 (76%), Positives = 62/71 (87%), Gaps = 0/71 (0%)

Query  25  DKEQAFEFVAKIIFDRAVQLIIGGNPAYESELVLSHIEMTMAEWGYRSPKVAVYCDSIKS  84
           ++EQAFE VAK+IFDR VQLIIGG+PA+ESE VL +IE TM EWGY+SPKVA YCDS+KS
Sbjct  2   EREQAFEIVAKVIFDRGVQLIIGGSPAFESEAVLFYIEDTMTEWGYKSPKVAEYCDSLKS  61

Query  85  ENDKFREMGIC  95
           END FR MGIC
Sbjct  62  ENDNFRSMGIC  72


>A0A5C0U7F7 Uncharacterized protein [Acinetobacter johnsonii]
Length=73

 Score = 116 bits (291),  Expect = 4e-40
 Identities = 55/72 (76%), Positives = 61/72 (85%), Gaps = 0/72 (0%)

Query  23  INDKEQAFEFVAKIIFDRAVQLIIGGNPAYESELVLSHIEMTMAEWGYRSPKVAVYCDSI  82
           +N+KEQAFE V+KIIFDRA QLI+GGNPAYESE VL HIEM M EWGYRS KVA YCDS+
Sbjct  1   MNEKEQAFEIVSKIIFDRACQLIVGGNPAYESEQVLFHIEMVMTEWGYRSAKVAEYCDSL  60

Query  83  KSENDKFREMGI  94
           K END  R+MGI
Sbjct  61  KQENDIMRDMGI  72


>A0A5N5XXZ1 Uncharacterized protein [Acinetobacter baumannii]
Length=72

 Score = 115 bits (288),  Expect = 1e-39
 Identities = 54/71 (76%), Positives = 59/71 (83%), Gaps = 0/71 (0%)

Query  25  DKEQAFEFVAKIIFDRAVQLIIGGNPAYESELVLSHIEMTMAEWGYRSPKVAVYCDSIKS  84
           DKEQAFE VAKIIFDRA  L++GGNPAYESELVL HIEM M EWGY+S KVA Y D +K+
Sbjct  2   DKEQAFEIVAKIIFDRACTLVVGGNPAYESELVLRHIEMCMVEWGYKSAKVAEYYDMLKA  61

Query  85  ENDKFREMGIC  95
           END FR MGIC
Sbjct  62  ENDNFRSMGIC  72


>A0A7U5LZY5 Uncharacterized protein [Acinetobacter baumannii (strain 
AB0057)]
Length=72

 Score = 115 bits (288),  Expect = 1e-39
 Identities = 54/71 (76%), Positives = 59/71 (83%), Gaps = 0/71 (0%)

Query  25  DKEQAFEFVAKIIFDRAVQLIIGGNPAYESELVLSHIEMTMAEWGYRSPKVAVYCDSIKS  84
           DKEQAFE VAKIIFDRA  L++GGNPAYESELVL HIEM M EWGY+S KVA Y D +K+
Sbjct  2   DKEQAFEIVAKIIFDRACTLVVGGNPAYESELVLRHIEMCMVEWGYKSAKVAEYYDMLKA  61

Query  85  ENDKFREMGIC  95
           END FR MGIC
Sbjct  62  ENDNFRSMGIC  72


>A0A5K1MML4 Uncharacterized protein [Acinetobacter baumannii NIPH 
615]
Length=72

 Score = 115 bits (288),  Expect = 1e-39
 Identities = 54/71 (76%), Positives = 59/71 (83%), Gaps = 0/71 (0%)

Query  25  DKEQAFEFVAKIIFDRAVQLIIGGNPAYESELVLSHIEMTMAEWGYRSPKVAVYCDSIKS  84
           DKEQAFE VAKIIFDRA  L++GGNPAYESELVL HIEM M EWGY+S KVA Y D +K+
Sbjct  2   DKEQAFEIVAKIIFDRACTLVVGGNPAYESELVLCHIEMCMVEWGYKSAKVAEYYDMLKA  61

Query  85  ENDKFREMGIC  95
           END FR MGIC
Sbjct  62  ENDNFRSMGIC  72


>A0A7U5GMN0 Uncharacterized protein [Acinetobacter baumannii]
Length=75

 Score = 115 bits (288),  Expect = 1e-39
 Identities = 54/71 (76%), Positives = 59/71 (83%), Gaps = 0/71 (0%)

Query  25  DKEQAFEFVAKIIFDRAVQLIIGGNPAYESELVLSHIEMTMAEWGYRSPKVAVYCDSIKS  84
           DKEQAFE VAKIIFDRA  L++GGNPAYESELVL HIEM M EWGY+S KVA Y D +K+
Sbjct  5   DKEQAFEIVAKIIFDRACTLVVGGNPAYESELVLRHIEMCMVEWGYKSAKVAEYYDMLKA  64

Query  85  ENDKFREMGIC  95
           END FR MGIC
Sbjct  65  ENDNFRSMGIC  75



Lambda      K        H        a         alpha
   0.333    0.142    0.445    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 45625


  Database: 580197efa23c5bb2202395794899433c.TrEMBL.fasta
    Posted date:  May 11, 2024  4:10 PM
  Number of letters in database: 878
  Number of sequences in database:  11



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40