BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 03938680437be8d286d0ba138da03c0f.TrEMBL.fasta
10 sequences; 3,212 total letters
Query= ACIAD1850
Length=85
Score E
Sequences producing significant alignments: (Bits) Value
Q6FB69 Uncharacterized protein [Acinetobacter baylyi (strain ATCC... 166 3e-59
A0A7G2SAX5 Uncharacterized protein [Acinetobacter sp] 165 7e-59
N9RFS2 Uncharacterized protein [Acinetobacter sp. ANC 3880] 73.9 1e-22
A0A2S8A9C1 Uncharacterized protein [Apibacter adventoris] 41.2 3e-09
A0A0M0LBP3 Spore gernimation protein [Viridibacillus arvi] 38.5 3e-08
A0A842VVT0 Uncharacterized protein [Candidatus Lokiarchaeota arch... 37.7 5e-08
A0A7G2S2A2 30S ribosomal protein S1 [Alcanivorax sp] 37.7 6e-08
A0A095SAL2 30S ribosomal protein S1 [Alcanivorax jadensis T9] 37.7 6e-08
B4X4E9 Small ribosomal subunit protein bS1 [Alcanivorax sp. DG881] 37.4 8e-08
A0A6J8DUK8 Mab-21-like HhH/H2TH-like domain-containing protein [M... 30.4 2e-05
>Q6FB69 Uncharacterized protein [Acinetobacter baylyi (strain
ATCC 33305 / BD413 / ADP1)]
Length=84
Score = 166 bits (420), Expect = 3e-59
Identities = 84/84 (100%), Positives = 84/84 (100%), Gaps = 0/84 (0%)
Query 1 MKKTILFSLLIAISYNLQAEEVKAKITYTIKDNRILSIIVNSKDEIKRQKCEELVMSKEA 60
MKKTILFSLLIAISYNLQAEEVKAKITYTIKDNRILSIIVNSKDEIKRQKCEELVMSKEA
Sbjct 1 MKKTILFSLLIAISYNLQAEEVKAKITYTIKDNRILSIIVNSKDEIKRQKCEELVMSKEA 60
Query 61 RELFKKKYEHSNEKYAVFYFICED 84
RELFKKKYEHSNEKYAVFYFICED
Sbjct 61 RELFKKKYEHSNEKYAVFYFICED 84
>A0A7G2SAX5 Uncharacterized protein [Acinetobacter sp]
Length=84
Score = 165 bits (417), Expect = 7e-59
Identities = 83/84 (99%), Positives = 84/84 (100%), Gaps = 0/84 (0%)
Query 1 MKKTILFSLLIAISYNLQAEEVKAKITYTIKDNRILSIIVNSKDEIKRQKCEELVMSKEA 60
MKKTILFSLLIAISYNLQAEEVKAKITYTIKDNRILSIIVNSKDEIKRQKCE+LVMSKEA
Sbjct 1 MKKTILFSLLIAISYNLQAEEVKAKITYTIKDNRILSIIVNSKDEIKRQKCEDLVMSKEA 60
Query 61 RELFKKKYEHSNEKYAVFYFICED 84
RELFKKKYEHSNEKYAVFYFICED
Sbjct 61 RELFKKKYEHSNEKYAVFYFICED 84
>N9RFS2 Uncharacterized protein [Acinetobacter sp. ANC 3880]
Length=84
Score = 73.9 bits (180), Expect = 1e-22
Identities = 34/82 (41%), Positives = 54/82 (66%), Gaps = 0/82 (0%)
Query 1 MKKTILFSLLIAISYNLQAEEVKAKITYTIKDNRILSIIVNSKDEIKRQKCEELVMSKEA 60
MKK I++SLL S AEE+ A + ++ + +I++I+VNSKD+ KR KCEE+++S +
Sbjct 1 MKKIIIWSLLTLASIQSHAEEITAHVVFSNEQKKIIAIVVNSKDQEKRLKCEEIIISNDG 60
Query 61 RELFKKKYEHSNEKYAVFYFIC 82
RE+ KK+ E N++ F C
Sbjct 61 REIIKKQAEKINQRVLKLTFTC 82
>A0A2S8A9C1 Uncharacterized protein [Apibacter adventoris]
Length=258
Score = 41.2 bits (95), Expect = 3e-09
Identities = 17/58 (29%), Positives = 34/58 (59%), Gaps = 0/58 (0%)
Query 20 EEVKAKITYTIKDNRILSIIVNSKDEIKRQKCEELVMSKEARELFKKKYEHSNEKYAV 77
+E+K +I ++IKDN+++ II+ + E+ K + + E++ KY+ N KY +
Sbjct 85 KELKEEIIFSIKDNKVIQIIIKNYKELPFTKTLNFITYMDKEEIWTAKYKMDNNKYFI 142
Score = 15.4 bits (28), Expect = 4.0
Identities = 6/14 (43%), Positives = 8/14 (57%), Gaps = 0/14 (0%)
Query 23 KAKITYTIKDNRIL 36
K I+Y DN +L
Sbjct 190 KITISYWTYDNNLL 203
>A0A0M0LBP3 Spore gernimation protein [Viridibacillus arvi]
Length=201
Score = 38.5 bits (88), Expect = 3e-08
Identities = 18/53 (34%), Positives = 34/53 (64%), Gaps = 1/53 (2%)
Query 17 LQAEEVKAKITYTIKDNRILSIIVNSKDEIKRQKCEELVMSKEARELFKKKYE 69
LQ+E+ K I ++DN +++ +E+K+ EE ++SK+A E +KK++E
Sbjct 39 LQSEDGKKAIRQLLEDNSFRDLVILENEEVKK-AIEETLLSKKAEEYWKKQFE 90
>A0A842VVT0 Uncharacterized protein [Candidatus Lokiarchaeota
archaeon]
Length=200
Score = 37.7 bits (86), Expect = 5e-08
Identities = 19/59 (32%), Positives = 34/59 (58%), Gaps = 1/59 (2%)
Query 18 QAEEVKAKITYTIKDNRILSIIVNSKDEIKRQKCE-ELVMSKEARELFKKKYEHSNEKY 75
+ EE K ++ + + L ++ EIK++ + E V K+ +ELFK+KY S+EK+
Sbjct 98 EVEETKIQMREEVDETNFLKALMEILSEIKKEMADKEHVKIKKVKELFKEKYSISDEKF 156
>A0A7G2S2A2 30S ribosomal protein S1 [Alcanivorax sp]
Length=560
Score = 37.7 bits (86), Expect = 6e-08
Identities = 23/61 (38%), Positives = 37/61 (61%), Gaps = 7/61 (11%)
Query 20 EEVKAKITYTIKDNRILSIIVNSKDEI-KRQKCEELVMSKEAR------ELFKKKYEHSN 72
+EV+AKIT + NR+LS+ + SKD+ +R+ + L ++A +L KK+ E SN
Sbjct 499 DEVEAKITNVDRKNRVLSLSIKSKDQADEREAIDGLSEQQDANAPKTIGDLIKKQMESSN 558
Query 73 E 73
E
Sbjct 559 E 559
Score = 15.0 bits (27), Expect = 5.7
Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
Query 18 QAEEVKAKIT 27
+ VKAK+T
Sbjct 276 EGTRVKAKVT 285
>A0A095SAL2 30S ribosomal protein S1 [Alcanivorax jadensis T9]
Length=560
Score = 37.7 bits (86), Expect = 6e-08
Identities = 23/61 (38%), Positives = 37/61 (61%), Gaps = 7/61 (11%)
Query 20 EEVKAKITYTIKDNRILSIIVNSKDEI-KRQKCEELVMSKEAR------ELFKKKYEHSN 72
+EV+AKIT + NR+LS+ + SKD+ +R+ + L ++A +L KK+ E SN
Sbjct 499 DEVEAKITNVDRKNRVLSLSIKSKDQADEREAIDGLSEQQDANAPKTIGDLIKKQMESSN 558
Query 73 E 73
E
Sbjct 559 E 559
Score = 15.0 bits (27), Expect = 5.7
Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
Query 18 QAEEVKAKIT 27
+ VKAK+T
Sbjct 276 EGTRVKAKVT 285
>B4X4E9 Small ribosomal subunit protein bS1 [Alcanivorax sp. DG881]
Length=482
Score = 37.4 bits (85), Expect = 8e-08
Identities = 22/61 (36%), Positives = 34/61 (56%), Gaps = 7/61 (11%)
Query 20 EEVKAKITYTIKDNRILSIIVNSKDEIK-------RQKCEELVMSKEARELFKKKYEHSN 72
+EV+AKIT + NR+LS+ + SKD+ Q+ ++ K +L KK+ E SN
Sbjct 421 DEVEAKITNVDRKNRVLSLSIKSKDQADEREAVEGHQEQQDANAPKTIGDLIKKQMESSN 480
Query 73 E 73
E
Sbjct 481 E 481
Score = 15.0 bits (27), Expect = 5.6
Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
Query 18 QAEEVKAKIT 27
+ VKAK+T
Sbjct 198 EGTRVKAKVT 207
>A0A6J8DUK8 Mab-21-like HhH/H2TH-like domain-containing protein
[Mytilus coruscus]
Length=699
Score = 30.4 bits (67), Expect = 2e-05
Identities = 26/98 (27%), Positives = 41/98 (42%), Gaps = 25/98 (26%)
Query 4 TILFSLLIAISYNL------------------------QAEEVKAKITYTIKD-NRILSI 38
TIL +L +SY + +A E++ KI I D L +
Sbjct 506 TILLALESVLSYMIECLDRRYLKHYFLESNLIAHITETEANEIREKIKEIIADPEAALQV 565
Query 39 IVNSKDEIKRQKCEELVMSKEARELFKKKYEHSNEKYA 76
+ E +R K EE + KE E+ K++ + SN+K A
Sbjct 566 YFDMNKECERSKQEEEISMKEMEEMKKRRNDPSNKKPA 603
Score = 17.7 bits (34), Expect = 0.68
Identities = 8/43 (19%), Positives = 21/43 (49%), Gaps = 3/43 (7%)
Query 45 EIKRQKCEELVMSKEAREL---FKKKYEHSNEKYAVFYFICED 84
E+ + E+++++ ++ + Y++ K FY + ED
Sbjct 62 EVVQAIMEQIMINSNGQDTESNMQSAYQYLQRKLQYFYKMLED 104
Score = 15.0 bits (27), Expect = 5.7
Identities = 6/16 (38%), Positives = 10/16 (63%), Gaps = 0/16 (0%)
Query 43 KDEIKRQKCEELVMSK 58
++EI ++ EEL K
Sbjct 11 EEEISMREMEELKKCK 26
Lambda K H a alpha
0.327 0.139 0.380 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 153276
Database: 03938680437be8d286d0ba138da03c0f.TrEMBL.fasta
Posted date: Jun 3, 2024 8:22 PM
Number of letters in database: 3,212
Number of sequences in database: 10
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
