Comparative Genomics

ACIAD1860 / TrEMBL Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 7799e35d21e96b48a0d4be7204a7840f.TrEMBL.fasta
           11 sequences; 711 total letters



Query= ACIAD1860

Length=66
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q6FB70 Uncharacterized protein [Acinetobacter baylyi (strain ATCC...  131     8e-47
A0A7G2SAH3 Uncharacterized protein [Acinetobacter sp]                 131     8e-47
A0A4Q7B4A1 Uncharacterized protein [Acinetobacter sp. WCHAc060025]    130     2e-46
A0A7S8XNK4 Repressor [Acinetobacter sp. TTH0-4]                       125     2e-44
A0A653KBM9 Putative repressor of phage gene expression protein (R...  120     3e-42
A0A4R0FGV1 Phage protein [Acinetobacter sp. ANC 4173]                 111     1e-38
A0A3A8E4E4 Uncharacterized protein [Acinetobacter tianfuensis]        104     4e-36
A0A4Q6XAY9 Antitoxin [Acinetobacter halotolerans]                     50.4    1e-14
V2UT93 Uncharacterized protein [Acinetobacter tjernbergiae DSM 14...  50.4    1e-14
N8NZP9 Uncharacterized protein [Acinetobacter bohemicus ANC 3994]     50.4    1e-14
A0A5K1ML95 Uncharacterized protein [Acinetobacter baumannii NIPH ...  50.4    1e-14


>Q6FB70 Uncharacterized protein [Acinetobacter baylyi (strain 
ATCC 33305 / BD413 / ADP1)]
Length=65

 Score = 131 bits (330),  Expect = 8e-47
 Identities = 65/65 (100%), Positives = 65/65 (100%), Gaps = 0/65 (0%)

Query  1   MASVQIRVQEDLADKIENAKWEIKYKLRLEIQNTDVLNALIYHHLKDLTEEEVLEYRKKF  60
           MASVQIRVQEDLADKIENAKWEIKYKLRLEIQNTDVLNALIYHHLKDLTEEEVLEYRKKF
Sbjct  1   MASVQIRVQEDLADKIENAKWEIKYKLRLEIQNTDVLNALIYHHLKDLTEEEVLEYRKKF  60

Query  61  LGKDE  65
           LGKDE
Sbjct  61  LGKDE  65


>A0A7G2SAH3 Uncharacterized protein [Acinetobacter sp]
Length=65

 Score = 131 bits (330),  Expect = 8e-47
 Identities = 65/65 (100%), Positives = 65/65 (100%), Gaps = 0/65 (0%)

Query  1   MASVQIRVQEDLADKIENAKWEIKYKLRLEIQNTDVLNALIYHHLKDLTEEEVLEYRKKF  60
           MASVQIRVQEDLADKIENAKWEIKYKLRLEIQNTDVLNALIYHHLKDLTEEEVLEYRKKF
Sbjct  1   MASVQIRVQEDLADKIENAKWEIKYKLRLEIQNTDVLNALIYHHLKDLTEEEVLEYRKKF  60

Query  61  LGKDE  65
           LGKDE
Sbjct  61  LGKDE  65


>A0A4Q7B4A1 Uncharacterized protein [Acinetobacter sp. WCHAc060025]
Length=65

 Score = 130 bits (327),  Expect = 2e-46
 Identities = 64/65 (98%), Positives = 65/65 (100%), Gaps = 0/65 (0%)

Query  1   MASVQIRVQEDLADKIENAKWEIKYKLRLEIQNTDVLNALIYHHLKDLTEEEVLEYRKKF  60
           MASVQIRVQEDLADKIENAKWEIKYKLRLEIQNTDVLNALIYHHLKDLTE+EVLEYRKKF
Sbjct  1   MASVQIRVQEDLADKIENAKWEIKYKLRLEIQNTDVLNALIYHHLKDLTEDEVLEYRKKF  60

Query  61  LGKDE  65
           LGKDE
Sbjct  61  LGKDE  65


>A0A7S8XNK4 Repressor [Acinetobacter sp. TTH0-4]
Length=65

 Score = 125 bits (315),  Expect = 2e-44
 Identities = 61/65 (94%), Positives = 65/65 (100%), Gaps = 0/65 (0%)

Query  1   MASVQIRVQEDLADKIENAKWEIKYKLRLEIQNTDVLNALIYHHLKDLTEEEVLEYRKKF  60
           MASVQIRVQE+LADKIENAKWEIKYKLRLEIQNTDVLNALIYHHLK+LTE+EVL+YRKKF
Sbjct  1   MASVQIRVQEELADKIENAKWEIKYKLRLEIQNTDVLNALIYHHLKNLTEDEVLQYRKKF  60

Query  61  LGKDE  65
           LGKDE
Sbjct  61  LGKDE  65


>A0A653KBM9 Putative repressor of phage gene expression protein 
(RstR-like) [Acinetobacter proteolyticus]
Length=65

 Score = 120 bits (300),  Expect = 3e-42
 Identities = 57/65 (88%), Positives = 62/65 (95%), Gaps = 0/65 (0%)

Query  1   MASVQIRVQEDLADKIENAKWEIKYKLRLEIQNTDVLNALIYHHLKDLTEEEVLEYRKKF  60
           MASVQIR+Q+ LAD+IE AKWEIKYKLRLEIQN D+LNALIYHHLKDLTE+EVLEYRKKF
Sbjct  1   MASVQIRIQDKLADEIETAKWEIKYKLRLEIQNVDILNALIYHHLKDLTEDEVLEYRKKF  60

Query  61  LGKDE  65
           LGKDE
Sbjct  61  LGKDE  65


>A0A4R0FGV1 Phage protein [Acinetobacter sp. ANC 4173]
Length=65

 Score = 111 bits (277),  Expect = 1e-38
 Identities = 52/65 (80%), Positives = 60/65 (92%), Gaps = 0/65 (0%)

Query  1   MASVQIRVQEDLADKIENAKWEIKYKLRLEIQNTDVLNALIYHHLKDLTEEEVLEYRKKF  60
           MASVQ R+Q +L DK+EN KWEIKYKLRLEIQ+TDV+NALIYHHLKDL+ +EVLEYR+KF
Sbjct  1   MASVQKRIQVELMDKVENMKWEIKYKLRLEIQDTDVINALIYHHLKDLSADEVLEYRRKF  60

Query  61  LGKDE  65
           LGKDE
Sbjct  61  LGKDE  65


>A0A3A8E4E4 Uncharacterized protein [Acinetobacter tianfuensis]
Length=65

 Score = 104 bits (260),  Expect = 4e-36
 Identities = 50/65 (77%), Positives = 59/65 (91%), Gaps = 0/65 (0%)

Query  1   MASVQIRVQEDLADKIENAKWEIKYKLRLEIQNTDVLNALIYHHLKDLTEEEVLEYRKKF  60
           MASVQIRV+++LADK+E AKWEIKYKLR+EIQNTDVLNALIY HL  L+E++VLEYR+K 
Sbjct  1   MASVQIRVRDELADKLETAKWEIKYKLRMEIQNTDVLNALIYKHLDKLSEDDVLEYRRKI  60

Query  61  LGKDE  65
           L KDE
Sbjct  61  LKKDE  65


>A0A4Q6XAY9 Antitoxin [Acinetobacter halotolerans]
Length=64

 Score = 50.4 bits (119),  Expect = 1e-14
 Identities = 20/63 (32%), Positives = 45/63 (71%), Gaps = 0/63 (0%)

Query  3   SVQIRVQEDLADKIENAKWEIKYKLRLEIQNTDVLNALIYHHLKDLTEEEVLEYRKKFLG  62
           +V +R+++D  + ++ A  E+ ++ ++ I+ +D+++ALI  +LKD+  E+V++YR + L 
Sbjct  2   AVTVRLRDDEEEMVKEATLEMMFETKIRIKESDLIHALIRKYLKDMKTEDVMKYRAEILK  61

Query  63  KDE  65
           KD+
Sbjct  62  KDD  64


>V2UT93 Uncharacterized protein [Acinetobacter tjernbergiae DSM 
14971 = CIP 107465]
Length=64

 Score = 50.4 bits (119),  Expect = 1e-14
 Identities = 20/63 (32%), Positives = 45/63 (71%), Gaps = 0/63 (0%)

Query  3   SVQIRVQEDLADKIENAKWEIKYKLRLEIQNTDVLNALIYHHLKDLTEEEVLEYRKKFLG  62
           +V +R+++D  + +++A  E+ ++ ++ I+ +DV++ LI  +LKD+  E+V++YR + L 
Sbjct  2   AVTVRLRDDEEEMVKDATLEMMFETKIRIKESDVIHTLIRKYLKDIKTEDVMKYRAEILK  61

Query  63  KDE  65
           KD+
Sbjct  62  KDD  64


>N8NZP9 Uncharacterized protein [Acinetobacter bohemicus ANC 3994]
Length=64

 Score = 50.4 bits (119),  Expect = 1e-14
 Identities = 21/63 (33%), Positives = 45/63 (71%), Gaps = 0/63 (0%)

Query  3   SVQIRVQEDLADKIENAKWEIKYKLRLEIQNTDVLNALIYHHLKDLTEEEVLEYRKKFLG  62
           +V +R+++D  + I+ A  E+ ++ ++ I+ +D++++LI  +LKDL  E+V++YR + L 
Sbjct  2   AVTVRLRDDEEEMIKEAALEMMFETKIRIKESDLIHSLIRKYLKDLKTEDVMKYRAEILK  61

Query  63  KDE  65
           KD+
Sbjct  62  KDD  64


>A0A5K1ML95 Uncharacterized protein [Acinetobacter baumannii NIPH 
615]
Length=64

 Score = 50.4 bits (119),  Expect = 1e-14
 Identities = 21/63 (33%), Positives = 44/63 (70%), Gaps = 0/63 (0%)

Query  3   SVQIRVQEDLADKIENAKWEIKYKLRLEIQNTDVLNALIYHHLKDLTEEEVLEYRKKFLG  62
           +V +R++++  D ++ A  E+ ++ ++ I+ +DVL+ LI  +LKD+  E+V++YR + L 
Sbjct  2   AVTVRLRDEEEDMVKEATLEMMFETKIRIKESDVLHTLIRKYLKDIKTEDVMKYRAEVLK  61

Query  63  KDE  65
           KD+
Sbjct  62  KDD  64



Lambda      K        H        a         alpha
   0.325    0.141    0.398    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 24624


  Database: 7799e35d21e96b48a0d4be7204a7840f.TrEMBL.fasta
    Posted date:  May 20, 2024  6:36 PM
  Number of letters in database: 711
  Number of sequences in database:  11



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40