Comparative Genomics

ACIAD1926 / TrEMBL Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 49c2ff0d0db316af1b9e085abafb7b63.TrEMBL.fasta
           13 sequences; 1,202 total letters



Query= ACIAD1926

Length=86
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

A0A7G2SIA1 Internalin [Acinetobacter sp]                              170     3e-61
Q6FB09 Lipoprotein [Acinetobacter baylyi (strain ATCC 33305 / BD4...  169     4e-61
A0A0M1I6N9 Lipoprotein [Acinetobacter sp. C15]                        137     4e-48
A0A1P8EH50 Internalin [Acinetobacter soli]                            137     4e-48
A0A3R8ZQ66 Internalin [Acinetobacter soli]                            137     4e-48
N9BUC7 Lipoprotein [Acinetobacter soli NIPH 2899]                     137     4e-48
A0A3R9CWY1 Internalin [Acinetobacter sp. FDAARGOS_515]                126     1e-43
N9C0K7 Lipoprotein [Acinetobacter ursingii ANC 3649]                  126     1e-43
A0A7T9ULC1 Internalin [Acinetobacter ursingii]                        123     1e-42
A0A009ZWW3 Lipoprotein [Acinetobacter sp. 479375]                     123     2e-42
A0A3A8ELA9 Internalin [Acinetobacter guerrae]                         119     6e-41
A0A241VI64 Internalin [Acinetobacter terrae]                          104     4e-35
A0A849B5W7 Internalin [Acinetobacter sp. ANC 5378]                    103     6e-35


>A0A7G2SIA1 Internalin [Acinetobacter sp]
Length=94

 Score = 170 bits (431),  Expect = 3e-61
 Identities = 85/85 (100%), Positives = 85/85 (100%), Gaps = 0/85 (0%)

Query  1   LIIAPLALTACSKKNDAPASEQGQTAPADEKITPEQQAAIDALDKPVMNEKNTDVPESVA  60
           LIIAPLALTACSKKNDAPASEQGQTAPADEKITPEQQAAIDALDKPVMNEKNTDVPESVA
Sbjct  10  LIIAPLALTACSKKNDAPASEQGQTAPADEKITPEQQAAIDALDKPVMNEKNTDVPESVA  69

Query  61  NVAADPATPASENEAPAGQNQDKAH  85
           NVAADPATPASENEAPAGQNQDKAH
Sbjct  70  NVAADPATPASENEAPAGQNQDKAH  94


>Q6FB09 Lipoprotein [Acinetobacter baylyi (strain ATCC 33305 / 
BD413 / ADP1)]
Length=85

 Score = 169 bits (429),  Expect = 4e-61
 Identities = 84/85 (99%), Positives = 85/85 (100%), Gaps = 0/85 (0%)

Query  1   LIIAPLALTACSKKNDAPASEQGQTAPADEKITPEQQAAIDALDKPVMNEKNTDVPESVA  60
           +IIAPLALTACSKKNDAPASEQGQTAPADEKITPEQQAAIDALDKPVMNEKNTDVPESVA
Sbjct  1   MIIAPLALTACSKKNDAPASEQGQTAPADEKITPEQQAAIDALDKPVMNEKNTDVPESVA  60

Query  61  NVAADPATPASENEAPAGQNQDKAH  85
           NVAADPATPASENEAPAGQNQDKAH
Sbjct  61  NVAADPATPASENEAPAGQNQDKAH  85


>A0A0M1I6N9 Lipoprotein [Acinetobacter sp. C15]
Length=94

 Score = 137 bits (345),  Expect = 4e-48
 Identities = 66/84 (79%), Positives = 75/84 (89%), Gaps = 0/84 (0%)

Query  1   LIIAPLALTACSKKNDAPASEQGQTAPADEKITPEQQAAIDALDKPVMNEKNTDVPESVA  60
           LIIAPL LTACSKKNDAPA++QGQ+APADEK+TPEQQAAIDALDKPVM+EKNTD+PESV+
Sbjct  10  LIIAPLTLTACSKKNDAPAAQQGQSAPADEKVTPEQQAAIDALDKPVMDEKNTDIPESVS  69

Query  61  NVAADPATPASENEAPAGQNQDKA  84
           N  AD ATPA+EN     QNQ+KA
Sbjct  70  NAPADAATPAAENAGATEQNQEKA  93


>A0A1P8EH50 Internalin [Acinetobacter soli]
Length=94

 Score = 137 bits (345),  Expect = 4e-48
 Identities = 66/84 (79%), Positives = 75/84 (89%), Gaps = 0/84 (0%)

Query  1   LIIAPLALTACSKKNDAPASEQGQTAPADEKITPEQQAAIDALDKPVMNEKNTDVPESVA  60
           LIIAPL LTACSKKNDAPA++QGQ+APADEK+TPEQQAAIDALDKPVM+EKNTD+PESV+
Sbjct  10  LIIAPLTLTACSKKNDAPAAQQGQSAPADEKVTPEQQAAIDALDKPVMDEKNTDIPESVS  69

Query  61  NVAADPATPASENEAPAGQNQDKA  84
           N  AD ATPA+EN     QNQ+KA
Sbjct  70  NAPADAATPAAENAGATEQNQEKA  93


>A0A3R8ZQ66 Internalin [Acinetobacter soli]
Length=94

 Score = 137 bits (345),  Expect = 4e-48
 Identities = 66/84 (79%), Positives = 75/84 (89%), Gaps = 0/84 (0%)

Query  1   LIIAPLALTACSKKNDAPASEQGQTAPADEKITPEQQAAIDALDKPVMNEKNTDVPESVA  60
           LIIAPL LTACSKKNDAPA++QGQ+APADEK+TPEQQAAIDALDKPVM+EKNTD+PESV+
Sbjct  10  LIIAPLTLTACSKKNDAPAAQQGQSAPADEKVTPEQQAAIDALDKPVMDEKNTDIPESVS  69

Query  61  NVAADPATPASENEAPAGQNQDKA  84
           N  AD ATPA+EN     QNQ+KA
Sbjct  70  NTPADAATPAAENAGATEQNQEKA  93


>N9BUC7 Lipoprotein [Acinetobacter soli NIPH 2899]
Length=94

 Score = 137 bits (345),  Expect = 4e-48
 Identities = 66/84 (79%), Positives = 75/84 (89%), Gaps = 0/84 (0%)

Query  1   LIIAPLALTACSKKNDAPASEQGQTAPADEKITPEQQAAIDALDKPVMNEKNTDVPESVA  60
           LIIAPL LTACSKKNDAPA++QGQ+APADEK+TPEQQAAIDALDKPVM+EKNTD+PESV+
Sbjct  10  LIIAPLTLTACSKKNDAPAAQQGQSAPADEKVTPEQQAAIDALDKPVMDEKNTDIPESVS  69

Query  61  NVAADPATPASENEAPAGQNQDKA  84
           N  AD ATPA+EN     QNQ+KA
Sbjct  70  NAPADAATPAAENAGATEQNQEKA  93


>A0A3R9CWY1 Internalin [Acinetobacter sp. FDAARGOS_515]
Length=95

 Score = 126 bits (316),  Expect = 1e-43
 Identities = 61/85 (72%), Positives = 72/85 (85%), Gaps = 1/85 (1%)

Query  1   LIIAPLALTACSKKNDAPASEQGQTAPADEKITPEQQAAIDALDKPVMNEKNTDVPESVA  60
           +++ PL LTAC+KKNDAPAS +GQ AP +EK+TPEQQAAIDALDKP+M+EKNTD+PESVA
Sbjct  10  IVVIPLTLTACAKKNDAPASHEGQAAPVEEKVTPEQQAAIDALDKPMMDEKNTDIPESVA  69

Query  61  NVAADPATPASENEAPA-GQNQDKA  84
           N  AD ATPA+E EA A  Q QDKA
Sbjct  70  NAPADAATPATEEEAAAVEQKQDKA  94


>N9C0K7 Lipoprotein [Acinetobacter ursingii ANC 3649]
Length=96

 Score = 126 bits (316),  Expect = 1e-43
 Identities = 61/85 (72%), Positives = 72/85 (85%), Gaps = 1/85 (1%)

Query  1   LIIAPLALTACSKKNDAPASEQGQTAPADEKITPEQQAAIDALDKPVMNEKNTDVPESVA  60
           +++ PL LTAC+KKNDAPAS +GQ AP +EK+TPEQQAAIDALDKP+M+EKNTD+PESVA
Sbjct  11  IVVIPLTLTACAKKNDAPASHEGQAAPVEEKVTPEQQAAIDALDKPMMDEKNTDIPESVA  70

Query  61  NVAADPATPASENEAPA-GQNQDKA  84
           N  AD ATPA+E EA A  Q QDKA
Sbjct  71  NAPADAATPATEEEAAAVEQKQDKA  95


>A0A7T9ULC1 Internalin [Acinetobacter ursingii]
Length=90

 Score = 123 bits (308),  Expect = 1e-42
 Identities = 57/77 (74%), Positives = 67/77 (87%), Gaps = 0/77 (0%)

Query  1   LIIAPLALTACSKKNDAPASEQGQTAPADEKITPEQQAAIDALDKPVMNEKNTDVPESVA  60
           +++ PL LTAC+KKNDAPAS +GQ AP +EK+TPEQQAAIDALDKPVM+EKNTD+PESVA
Sbjct  10  IVVIPLTLTACAKKNDAPASHEGQAAPVEEKVTPEQQAAIDALDKPVMDEKNTDIPESVA  69

Query  61  NVAADPATPASENEAPA  77
           N  AD ATPA+E EA A
Sbjct  70  NAPADAATPATEEEAAA  86


 Score = 15.8 bits (29),  Expect = 0.92
 Identities = 6/15 (40%), Positives = 8/15 (53%), Gaps = 0/15 (0%)

Query  70  ASENEAPAGQNQDKA  84
           A +N+APA      A
Sbjct  21  AKKNDAPASHEGQAA  35


>A0A009ZWW3 Lipoprotein [Acinetobacter sp. 479375]
Length=91

 Score = 123 bits (308),  Expect = 2e-42
 Identities = 57/77 (74%), Positives = 67/77 (87%), Gaps = 0/77 (0%)

Query  1   LIIAPLALTACSKKNDAPASEQGQTAPADEKITPEQQAAIDALDKPVMNEKNTDVPESVA  60
           +++ PL LTAC+KKNDAPAS +GQ AP +EK+TPEQQAAIDALDKPVM+EKNTD+PESVA
Sbjct  11  IVVIPLTLTACAKKNDAPASHEGQAAPVEEKVTPEQQAAIDALDKPVMDEKNTDIPESVA  70

Query  61  NVAADPATPASENEAPA  77
           N  AD ATPA+E EA A
Sbjct  71  NAPADAATPATEEEAAA  87


 Score = 15.8 bits (29),  Expect = 0.92
 Identities = 6/15 (40%), Positives = 8/15 (53%), Gaps = 0/15 (0%)

Query  70  ASENEAPAGQNQDKA  84
           A +N+APA      A
Sbjct  22  AKKNDAPASHEGQAA  36


>A0A3A8ELA9 Internalin [Acinetobacter guerrae]
Length=95

 Score = 119 bits (298),  Expect = 6e-41
 Identities = 58/86 (67%), Positives = 70/86 (81%), Gaps = 1/86 (1%)

Query  1   LIIAPLALTACSKKNDAPASEQGQTAPADEKITPEQQAAIDALDKPVMNEKNTDVPESVA  60
           L++ PL LTAC+KK+DAPAS +GQT P +EK+T EQQAAIDALDKPVM+EKNTD+PESVA
Sbjct  10  LVMIPLTLTACAKKDDAPASHEGQTTPVEEKVTSEQQAAIDALDKPVMDEKNTDIPESVA  69

Query  61  NVAADPATPAS-ENEAPAGQNQDKAH  85
           N  ADPATPA+ E  A   Q + +AH
Sbjct  70  NATADPATPATDEKAATIEQKKGEAH  95


>A0A241VI64 Internalin [Acinetobacter terrae]
Length=90

 Score = 104 bits (259),  Expect = 4e-35
 Identities = 50/75 (67%), Positives = 62/75 (83%), Gaps = 0/75 (0%)

Query  1   LIIAPLALTACSKKNDAPASEQGQTAPADEKITPEQQAAIDALDKPVMNEKNTDVPESVA  60
           L+IAPLALTAC+KK++AP ++   TA  +EKITPEQQAAID+LDKPV++EKNTDVP  +A
Sbjct  10  LLIAPLALTACAKKDEAPKNDAAATAAVEEKITPEQQAAIDSLDKPVLDEKNTDVPAEIA  69

Query  61  NVAADPATPASENEA  75
           N  AD ATPA+E  A
Sbjct  70  NANADEATPAAEAAA  84


>A0A849B5W7 Internalin [Acinetobacter sp. ANC 5378]
Length=90

 Score = 103 bits (258),  Expect = 6e-35
 Identities = 49/75 (65%), Positives = 62/75 (83%), Gaps = 0/75 (0%)

Query  1   LIIAPLALTACSKKNDAPASEQGQTAPADEKITPEQQAAIDALDKPVMNEKNTDVPESVA  60
           L+IAPLALTAC+KK++AP ++   TA  +EK+TPEQQAAID+LDKPV++EKNTDVP  +A
Sbjct  10  LLIAPLALTACAKKDEAPKNDAAATAAVEEKVTPEQQAAIDSLDKPVLDEKNTDVPAEIA  69

Query  61  NVAADPATPASENEA  75
           N  AD ATPA+E  A
Sbjct  70  NANADEATPAAEAAA  84



Lambda      K        H        a         alpha
   0.309    0.123    0.343    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 55180


  Database: 49c2ff0d0db316af1b9e085abafb7b63.TrEMBL.fasta
    Posted date:  May 20, 2024  11:16 PM
  Number of letters in database: 1,202
  Number of sequences in database:  13



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40