BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: a3782ca4649c5e434228f00f996c72b9.SwissProt.fasta
           1 sequences; 257 total letters



Query= ACIAD1956

Length=357
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

O34447 Uncharacterized membrane protein YceF [Bacillus subtilis (...  50.1    1e-11


>O34447 Uncharacterized membrane protein YceF [Bacillus subtilis 
(strain 168)]
Length=257

 Score = 50.1 bits (118),  Expect = 1e-11
 Identities = 52/206 (25%), Positives = 96/206 (47%), Gaps = 35/206 (17%)

Query  177  IALLIMAAFVPEQQKLIVIMAGIWGIVVY----IG----------VQVLG----------  212
            + L +M   +PE+Q+   +  G++G  ++    IG          ++VLG          
Sbjct  49   LVLAVMVKHLPEKQRKKALTYGLFGAYIFRFIFIGLGMLLIKFWWIKVLGALYLAWLVIK  108

Query  213  HLLEGSSEDDETDEKQVSGTSTNIVKAGI--GGFLYLEVLDASFSFDGVIGAFAITSDVV  270
            H   G  E++    K+    S  +   GI     + +E++D +FS D ++ AFA++  V 
Sbjct  109  HFWIGEKEEEADGMKK---NSWMVRTFGIFWATVISVELMDLAFSVDSILAAFAVSEKVW  165

Query  271  VIMLGLAIGAMFVRSMT-IYLVEKGTLEAFIYLEHGAHYAIGALAAIMLYTGTGGHVPEV  329
            V+++G  +G + +R++  ++LV    ++    LE+ A   IG +A  M  +     +P  
Sbjct  166  VLLIGGMLGILMMRTVAKVFLV---LIDKIPELENTAFVLIGIIALKMAGSAFHYEMPHS  222

Query  330  VTGLIGVAFIIWAVLSSIAYSKKQTQ  355
            V  +I +A   +AV   I Y  KQ Q
Sbjct  223  VFFIIIIA--AFAVTLIIHYINKQKQ  246


 Score = 29.6 bits (65),  Expect = 5e-05
 Identities = 52/233 (22%), Positives = 96/233 (41%), Gaps = 43/233 (18%)

Query  44   LAVMEVSLSFDNAVVNASVLRNWDEFWKKLFLTVGILVAVFGMRLIFPLLIVGVTADMGM  103
            L V+E  LS DNA+V A ++++  E  +K  LT G+  A      IF  + +G    +GM
Sbjct  36   LVVLEGLLSADNALVLAVMVKHLPEKQRKKALTYGLFGA-----YIFRFIFIG----LGM  86

Query  104  IEVAKLALNDPKTYSEKLLAHHAEIAAFGGMFLMLVFLNFLF--------DDGKDTHWF-  154
                             LL     I   G ++L  + +   +        D  K   W  
Sbjct  87   -----------------LLIKFWWIKVLGALYLAWLVIKHFWIGEKEEEADGMKKNSWMV  129

Query  155  HWLETHLSNLANIPAMSVFVSLIALLIMAAFVPEQQKLIVIMAGIWGIVVYIGV-QVLGH  213
                   + + ++  M +  S+ +  I+AAF   ++  ++++ G+ GI++   V +V   
Sbjct  130  RTFGIFWATVISVELMDLAFSVDS--ILAAFAVSEKVWVLLIGGMLGILMMRTVAKVFLV  187

Query  214  LLEGSSEDDETDEKQVSGTSTNIVKAGIGGFLYLEVLDASFSFDGVIGAFAIT  266
            L++   E + T     +     I+   + G  +   +  S  F  +I AFA+T
Sbjct  188  LIDKIPELENT-----AFVLIGIIALKMAGSAFHYEMPHSVFFIIIIAAFAVT  235


 Score = 16.2 bits (30),  Expect = 1.0
 Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 4/54 (7%)

Query  42   TVLAVMEVSLSFDNAVVNASVLRNWDEFWKKLFLTVGILVAVFGMRLIFPLLIV  95
            TV++V  + L+F       S+L  +    K   L +G ++ +  MR +  + +V
Sbjct  138  TVISVELMDLAFS----VDSILAAFAVSEKVWVLLIGGMLGILMMRTVAKVFLV  187



Lambda      K        H        a         alpha
   0.329    0.142    0.427    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 75900


  Database: a3782ca4649c5e434228f00f996c72b9.SwissProt.fasta
    Posted date:  May 20, 2024  8:09 AM
  Number of letters in database: 257
  Number of sequences in database:  1



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40