BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 5bc51bd5158d0d8140a987834ce6389b.SwissProt.fasta
           2 sequences; 1,145 total letters



Query= ACIAD1975

Length=285
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

O53664 3-hydroxyacyl-thioester dehydratase X [Mycobacterium tuber...  143     3e-45
O74365 SWI/SNF chromatin-remodeling complex subunit sol1 [Schizos...  37.7    6e-07


>O53664 3-hydroxyacyl-thioester dehydratase X [Mycobacterium tuberculosis 
(strain ATCC 25618 / H37Rv)]
Length=280

 Score = 143 bits (361),  Expect = 3e-45
 Identities = 87/254 (34%), Positives = 120/254 (47%), Gaps = 3/254 (1%)

Query  34   LPQVEYVVDSFQIDQQHLRDYNEVCGFQNDGFIPAIYLAVLSQSLQMHMMTTEAFPFPVL  93
            LP     V+   ID  ++  Y  V G +    +P  Y   L+    M ++T   FPF  +
Sbjct  27   LPNRTVTVEELPIDPANVAAYAAVTGLRYGNQVPLTYPFALTFPSVMSLVTGFDFPFAAM  86

Query  94   GLVHIRNQIKQIRKIAVNETLTLSCQFGELKPHDKGLQFDFITTAKVGNDIVMEGITTYL  153
            G +H  N I Q R IAV + + +  +   L+ H +GL  D +T   VGND+    +TT+L
Sbjct  87   GAIHTENHITQYRPIAVTDAVGVRVRAENLREHRRGLLVDLVTNVSVGNDVAWHQVTTFL  146

Query  154  SRQKTEQVSAEKPKENKTPDY-QVQQVWDVAENTGRRYAKTSGDYNLIHIHAITAKAFGF  212
             +Q+T      KP   K P       V  +     RRYA   GD+N IH + I AK FGF
Sbjct  147  HQQRTSLSGEPKPPPQKKPKLPPPAAVLRITPAKIRRYAAVGGDHNPIHTNPIAAKLFGF  206

Query  213  KQAIAHGMWSKAKALANIV--LPDAYEADVWFKLPMYLPSKVEFLTAEQSKETDFLIRNA  270
               IAHGM++ A  LANI    PDA    V F  P+ LP+      AE     D  +RN 
Sbjct  207  PTVIAHGMFTAAAVLANIEARFPDAVRYSVRFAKPVLLPATAGLYVAEGDGGWDLTLRNM  266

Query  271  KSQKPHVSGVVKAL  284
                PH++  V+ L
Sbjct  267  AKGYPHLTATVRGL  280


>O74365 SWI/SNF chromatin-remodeling complex subunit sol1 [Schizosaccharomyces 
pombe (strain 972 / ATCC 24843)]
Length=865

 Score = 37.7 bits (86),  Expect = 6e-07
 Identities = 19/66 (29%), Positives = 33/66 (50%), Gaps = 0/66 (0%)

Query  198  NLIHIHAITAKAFGFKQAIAHGMWSKAKALANIVLPDAYEADVWFKLPMYLPSKVEFLTA  257
            NL+ ++A+  +A G +Q  AH  W K  A      PDA    + +     LP +  +L A
Sbjct  221  NLMMLYALVMRAGGSRQVSAHNFWPKISASLGFPSPDAISLLIQYYNSYLLPYEEAWLAA  280

Query  258  EQSKET  263
            +Q +++
Sbjct  281  QQQQKS  286


 Score = 16.9 bits (32),  Expect = 2.2
 Identities = 5/7 (71%), Positives = 6/7 (86%), Gaps = 0/7 (0%)

Query  62  NDGFIPA  68
           N GF+PA
Sbjct  3   NQGFVPA  9


 Score = 15.8 bits (29),  Expect = 5.1
 Identities = 8/28 (29%), Positives = 13/28 (46%), Gaps = 8/28 (29%)

Query  223  KAKALANIVLPDAYEADVWFKLPMYLPS  250
            K+K + N  LP +        +P Y P+
Sbjct  643  KSKTILNDTLPTS--------IPSYTPA  662



Lambda      K        H        a         alpha
   0.322    0.136    0.402    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 267177


  Database: 5bc51bd5158d0d8140a987834ce6389b.SwissProt.fasta
    Posted date:  May 20, 2024  7:19 AM
  Number of letters in database: 1,145
  Number of sequences in database:  2



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40