BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: adad0be6013a6ea6d59741c69cf07411.SwissProt.fasta
18 sequences; 4,232 total letters
Query= ACIAD2059
Length=234
Score E
Sequences producing significant alignments: (Bits) Value
P0AER4 Glutamate/aspartate import permease protein GltJ [Escheric... 164 7e-54
P0AER3 Glutamate/aspartate import permease protein GltJ [Escheric... 164 7e-54
P0AER6 Glutamate/aspartate import permease protein GltK [Escheric... 112 8e-34
P0AER7 Glutamate/aspartate import permease protein GltK [Escheric... 112 8e-34
P0AER5 Glutamate/aspartate import permease protein GltK [Escheric... 112 8e-34
O34671 Probable glutamine ABC transporter permease protein GlnM [... 99.0 7e-29
P41083 Putative glutamine transport system permease protein GlnP ... 96.7 5e-28
Q68XN8 Putative glutamine transport system permease protein GlnP ... 94.7 3e-27
Q92J96 Putative glutamine transport system permease protein GlnP ... 94.4 4e-27
Q1RHC0 Putative glutamine transport system permease protein GlnP ... 93.2 1e-26
P54536 Arginine transport system permease protein ArtQ [Bacillus ... 92.4 2e-26
Q4UKC4 Putative glutamine transport system permease protein GlnP ... 92.0 3e-26
P35113 Nopaline transport system permease protein NocM [Agrobacte... 90.5 2e-25
P54953 Probable amino-acid permease protein YxeN [Bacillus subtil... 81.6 3e-22
P0AEU3 Histidine/lysine/arginine/ornithine transport system perme... 76.3 3e-20
O34606 Probable glutamine ABC transporter permease protein GlnP [... 75.5 5e-20
P0AFT2 L-cystine transport system permease protein TcyL [Escheric... 75.5 5e-20
Q52813 General L-amino acid transport system permease protein Aap... 77.4 6e-20
>P0AER4 Glutamate/aspartate import permease protein GltJ [Escherichia
coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)]
Length=246
Score = 164 bits (415), Expect = 7e-54
Identities = 95/235 (40%), Positives = 138/235 (59%), Gaps = 12/235 (5%)
Query 1 LQMLGSGVVTMIWTAVAAFLIAFFLGSLLGIIRTLPNKPLALIGDTYVEIFRNIPLIVQL 60
L + SG I ++ A++IAF +GS GI+RT+PN+ L+ +G YVE+FRN+PLIVQ
Sbjct 22 LGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVPLIVQF 81
Query 61 FFWAFVFPELLPASLSSGSGEVVAGGWWKNIL--NNHPAVIGVFALGLYTAARVSEHIRA 118
F W V PELLP + G W+K L N + + LGL+TAARV E +RA
Sbjct 82 FTWYLVIPELLPEKI---------GMWFKAELDPNIQFFLSSMLCLGLFTAARVCEQVRA 132
Query 119 GINTVSSGQKFAASAMGFTTGQSYRYVILPVAYRTVWPTITSEAMNVFKNSAVLYALSVL 178
I ++ GQK AA AMG T Q+YRYV+LP AYR + P +TSE MN+ KNSA+ + ++
Sbjct 133 AIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLV 192
Query 179 NFFAYTKTMREETSQDIIILILSTPVYLVITYTIKFIMAWIEKRMAVPGLGSGGK 233
+ A + + ++ T Y++I I +M +E+++ +PG GGK
Sbjct 193 DMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVMTLVERKVRLPG-NMGGK 246
>P0AER3 Glutamate/aspartate import permease protein GltJ [Escherichia
coli (strain K12)]
Length=246
Score = 164 bits (415), Expect = 7e-54
Identities = 95/235 (40%), Positives = 138/235 (59%), Gaps = 12/235 (5%)
Query 1 LQMLGSGVVTMIWTAVAAFLIAFFLGSLLGIIRTLPNKPLALIGDTYVEIFRNIPLIVQL 60
L + SG I ++ A++IAF +GS GI+RT+PN+ L+ +G YVE+FRN+PLIVQ
Sbjct 22 LGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVPLIVQF 81
Query 61 FFWAFVFPELLPASLSSGSGEVVAGGWWKNIL--NNHPAVIGVFALGLYTAARVSEHIRA 118
F W V PELLP + G W+K L N + + LGL+TAARV E +RA
Sbjct 82 FTWYLVIPELLPEKI---------GMWFKAELDPNIQFFLSSMLCLGLFTAARVCEQVRA 132
Query 119 GINTVSSGQKFAASAMGFTTGQSYRYVILPVAYRTVWPTITSEAMNVFKNSAVLYALSVL 178
I ++ GQK AA AMG T Q+YRYV+LP AYR + P +TSE MN+ KNSA+ + ++
Sbjct 133 AIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLV 192
Query 179 NFFAYTKTMREETSQDIIILILSTPVYLVITYTIKFIMAWIEKRMAVPGLGSGGK 233
+ A + + ++ T Y++I I +M +E+++ +PG GGK
Sbjct 193 DMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVMTLVERKVRLPG-NMGGK 246
>P0AER6 Glutamate/aspartate import permease protein GltK [Escherichia
coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)]
Length=224
Score = 112 bits (279), Expect = 8e-34
Identities = 65/229 (28%), Positives = 122/229 (53%), Gaps = 22/229 (10%)
Query 1 LQMLGSGVVTMIWTAVAAFLIAFFLGSLLGIIRTLPNKPLALIGDTYVEIFRNIPLIVQL 60
L L G+V + V A +I G++L ++R P+A YV +FR+IPL++ L
Sbjct 13 LPYLLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVL 72
Query 61 FFWAFVFPELLPASLSSGSGEVVAGGWWKNILNNHPA-----VIGVFALGLYTAARVSEH 115
++ + P G+ +N+L P + + A ++ AA SE
Sbjct 73 LWFYLIVP-----------------GFLQNVLGLSPKNDIRLISAMVAFSMFEAAYYSEI 115
Query 116 IRAGINTVSSGQKFAASAMGFTTGQSYRYVILPVAYRTVWPTITSEAMNVFKNSAVLYAL 175
IRAGI ++S GQ AA A+G T QS + +ILP A+R + P + ++ + +F++++++Y L
Sbjct 116 IRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYVL 175
Query 176 SVLNFFAYTKTMREETSQDIIILILSTPVYLVITYTIKFIMAWIEKRMA 224
S+ +FF T+ E + +++ + VY VI+ + +++++++R A
Sbjct 176 SLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLLVSYLKRRTA 224
>P0AER7 Glutamate/aspartate import permease protein GltK [Escherichia
coli O157:H7]
Length=224
Score = 112 bits (279), Expect = 8e-34
Identities = 65/229 (28%), Positives = 122/229 (53%), Gaps = 22/229 (10%)
Query 1 LQMLGSGVVTMIWTAVAAFLIAFFLGSLLGIIRTLPNKPLALIGDTYVEIFRNIPLIVQL 60
L L G+V + V A +I G++L ++R P+A YV +FR+IPL++ L
Sbjct 13 LPYLLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVL 72
Query 61 FFWAFVFPELLPASLSSGSGEVVAGGWWKNILNNHPA-----VIGVFALGLYTAARVSEH 115
++ + P G+ +N+L P + + A ++ AA SE
Sbjct 73 LWFYLIVP-----------------GFLQNVLGLSPKNDIRLISAMVAFSMFEAAYYSEI 115
Query 116 IRAGINTVSSGQKFAASAMGFTTGQSYRYVILPVAYRTVWPTITSEAMNVFKNSAVLYAL 175
IRAGI ++S GQ AA A+G T QS + +ILP A+R + P + ++ + +F++++++Y L
Sbjct 116 IRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYVL 175
Query 176 SVLNFFAYTKTMREETSQDIIILILSTPVYLVITYTIKFIMAWIEKRMA 224
S+ +FF T+ E + +++ + VY VI+ + +++++++R A
Sbjct 176 SLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLLVSYLKRRTA 224
>P0AER5 Glutamate/aspartate import permease protein GltK [Escherichia
coli (strain K12)]
Length=224
Score = 112 bits (279), Expect = 8e-34
Identities = 65/229 (28%), Positives = 122/229 (53%), Gaps = 22/229 (10%)
Query 1 LQMLGSGVVTMIWTAVAAFLIAFFLGSLLGIIRTLPNKPLALIGDTYVEIFRNIPLIVQL 60
L L G+V + V A +I G++L ++R P+A YV +FR+IPL++ L
Sbjct 13 LPYLLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVL 72
Query 61 FFWAFVFPELLPASLSSGSGEVVAGGWWKNILNNHPA-----VIGVFALGLYTAARVSEH 115
++ + P G+ +N+L P + + A ++ AA SE
Sbjct 73 LWFYLIVP-----------------GFLQNVLGLSPKNDIRLISAMVAFSMFEAAYYSEI 115
Query 116 IRAGINTVSSGQKFAASAMGFTTGQSYRYVILPVAYRTVWPTITSEAMNVFKNSAVLYAL 175
IRAGI ++S GQ AA A+G T QS + +ILP A+R + P + ++ + +F++++++Y L
Sbjct 116 IRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYVL 175
Query 176 SVLNFFAYTKTMREETSQDIIILILSTPVYLVITYTIKFIMAWIEKRMA 224
S+ +FF T+ E + +++ + VY VI+ + +++++++R A
Sbjct 176 SLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLLVSYLKRRTA 224
>O34671 Probable glutamine ABC transporter permease protein GlnM
[Bacillus subtilis (strain 168)]
Length=216
Score = 99.0 bits (245), Expect = 7e-29
Identities = 69/221 (31%), Positives = 107/221 (48%), Gaps = 20/221 (9%)
Query 3 MLGSGVVTMIWTAVAAFLIAFFLGSLLGIIRTLPNKPLALIGDTYVEIFRNIPLIVQLFF 62
M G + +V A +F LG + ++R KPL +G YVE RNIPL++ F
Sbjct 12 MYMDGFYHTLLASVIALAGSFVLGVAVAVMRITVFKPLQWLGTAYVEFIRNIPLLLITFV 71
Query 63 WAFVFPELLPASLSSGSGEVVAGGWWKNILNNHPAVIGVFALGLYTAARVSEHIRAGINT 122
+ F P AG L G AL +YT+A ++E IRAGI +
Sbjct 72 FYFGLPN--------------AG------LRLDGFQAGTVALTIYTSAFIAEAIRAGIQS 111
Query 123 VSSGQKFAASAMGFTTGQSYRYVILPVAYRTVWPTITSEAMNVFKNSAVLYALSVLNFFA 182
VS GQ AA + GFT Q+ ++ILP A + V P + ++ +N+ KNS++L ++ L+
Sbjct 112 VSKGQMEAARSSGFTYSQAMLHIILPQAIKIVIPPLGNQFLNLVKNSSILGVVAGLDLMY 171
Query 183 YTKTMREETSQDIIILILSTPVYLVITYTIKFIMAWIEKRM 223
+ T + I YLV+T + + ++EKR+
Sbjct 172 QADLVSSSTLVVFDVYIFVALFYLVLTIPLSIGVNYLEKRL 212
>P41083 Putative glutamine transport system permease protein GlnP
[Rickettsia prowazekii (strain Madrid E)]
Length=218
Score = 96.7 bits (239), Expect = 5e-28
Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 19/219 (9%)
Query 7 GVVTMIWTAVAAFLIAFFLGSLLGIIRTLPNKPLALIGDTYVEIFRNIPLIVQLFFWAFV 66
G + + +V A ++ +G LL I + N+ L L + Y IFR PL+VQL F
Sbjct 18 GTLVTLKYSVIAVILGLVIGMLLAICKVNKNRVLRLFANFYTSIFRGTPLLVQLSIIYFA 77
Query 67 FPELLPASLSSGSGEVVAGGWWKNILNNHPAVIGVFALGLYTAARVSEHIRAGINTVSSG 126
P ++ NI N + GV + L + A VSE IRAGINTV G
Sbjct 78 APYII------------------NIKFN-VFMAGVISFALNSGAYVSEVIRAGINTVDKG 118
Query 127 QKFAASAMGFTTGQSYRYVILPVAYRTVWPTITSEAMNVFKNSAVLYALSVLNFFAYTKT 186
Q AA A+ + +ILP A ++P++ +E +N+ K SA++ L ++ +
Sbjct 119 QFEAAEALAIPKFLIMKDIILPQAINNIFPSLVNELVNLIKESAIISMLGEMDLMRRAQI 178
Query 187 MREETSQDIIILILSTPVYLVITYTIKFIMAWIEKRMAV 225
+ ET ++++ Y ++ I FI IEK+M V
Sbjct 179 VSIETYNYFFPMLIAACCYYILVILISFIAKIIEKKMIV 217
>Q68XN8 Putative glutamine transport system permease protein GlnP
[Rickettsia typhi (strain ATCC VR-144 / Wilmington)]
Length=218
Score = 94.7 bits (234), Expect = 3e-27
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 19/219 (9%)
Query 7 GVVTMIWTAVAAFLIAFFLGSLLGIIRTLPNKPLALIGDTYVEIFRNIPLIVQLFFWAFV 66
G + + ++ A ++ +G LL I + N L L + Y IFR PL+VQL F
Sbjct 18 GTLVTLKYSIIAVILGLVIGMLLAICKVNKNCVLRLFANFYTSIFRGTPLLVQLSIIYFA 77
Query 67 FPELLPASLSSGSGEVVAGGWWKNILNNHPAVIGVFALGLYTAARVSEHIRAGINTVSSG 126
P ++ S + GV + L + A VSE IRAGINT+ G
Sbjct 78 APYIISIKFSV-------------------FMAGVISFALNSGAYVSEVIRAGINTIDKG 118
Query 127 QKFAASAMGFTTGQSYRYVILPVAYRTVWPTITSEAMNVFKNSAVLYALSVLNFFAYTKT 186
Q AA A+ + +ILP A ++P++ +E +N+ K SA++ L ++ +
Sbjct 119 QFEAAEALAIPKFLIMKDIILPQAINNIFPSLVNELINLIKESAIISMLGEMDLMRRAQI 178
Query 187 MREETSQDIIILILSTPVYLVITYTIKFIMAWIEKRMAV 225
+ ET ++++ Y ++ I FI IEK+M V
Sbjct 179 VSIETYNYFFPMLIAACCYYILVMLISFIAKIIEKKMIV 217
>Q92J96 Putative glutamine transport system permease protein GlnP
[Rickettsia conorii (strain ATCC VR-613 / Malish 7)]
Length=218
Score = 94.4 bits (233), Expect = 4e-27
Identities = 62/219 (28%), Positives = 100/219 (46%), Gaps = 19/219 (9%)
Query 7 GVVTMIWTAVAAFLIAFFLGSLLGIIRTLPNKPLALIGDTYVEIFRNIPLIVQLFFWAFV 66
G + + +V A + +G LL I + N+ L L + Y IFR PL++QL F
Sbjct 18 GTLVTLKYSVIAVIFGLVIGMLLAICKVNKNRALRLFANFYTSIFRGTPLLIQLSIIYFA 77
Query 67 FPELLPASLSSGSGEVVAGGWWKNILNNHPAVIGVFALGLYTAARVSEHIRAGINTVSSG 126
P ++ S + G A L + A VSE IRAGIN V G
Sbjct 78 SPYIIGIKFSV-------------------FMAGAIAFSLNSGAYVSEVIRAGINAVDKG 118
Query 127 QKFAASAMGFTTGQSYRYVILPVAYRTVWPTITSEAMNVFKNSAVLYALSVLNFFAYTKT 186
Q AA A+ + +ILP A + ++P++ +E +N+ K SA++ L ++ +
Sbjct 119 QFEAAEALAIPKFLITKDIILPQAVKNIFPSLVNELVNLIKESAIISMLGEMDLMRRAQI 178
Query 187 MREETSQDIIILILSTPVYLVITYTIKFIMAWIEKRMAV 225
+ ET ++++ Y ++ I FI IEK+M V
Sbjct 179 VSIETYNYFFPMLIAACCYYILVMLISFIAKIIEKKMIV 217
>Q1RHC0 Putative glutamine transport system permease protein GlnP
[Rickettsia bellii (strain RML369-C)]
Length=218
Score = 93.2 bits (230), Expect = 1e-26
Identities = 61/219 (28%), Positives = 100/219 (46%), Gaps = 19/219 (9%)
Query 7 GVVTMIWTAVAAFLIAFFLGSLLGIIRTLPNKPLALIGDTYVEIFRNIPLIVQLFFWAFV 66
G + + +V A + +G LL + + N+ L L D Y IFR PL++QL F
Sbjct 18 GTLITLKYSVIAVIFGLVIGVLLALCKVNKNRALRLFADFYTSIFRGTPLLIQLSIIYFA 77
Query 67 FPELLPASLSSGSGEVVAGGWWKNILNNHPAVIGVFALGLYTAARVSEHIRAGINTVSSG 126
P L+ + + G + L + A VSE IRAGIN V G
Sbjct 78 SPYLIGIKFTV-------------------FMAGAISFSLNSGAYVSEVIRAGINAVDKG 118
Query 127 QKFAASAMGFTTGQSYRYVILPVAYRTVWPTITSEAMNVFKNSAVLYALSVLNFFAYTKT 186
Q AA A+ + +ILP A + ++P++T+E +N+ K SA++ ++ +
Sbjct 119 QFEAAEALAIPKFLIMKDIILPQAIKNIFPSLTNELINLIKESAIISMFGEMDLMKRAQI 178
Query 187 MREETSQDIIILILSTPVYLVITYTIKFIMAWIEKRMAV 225
+ ET +I++ Y ++ I FI IEK++ V
Sbjct 179 VSLETYNYFFPMIVAACCYYILVMLISFIARIIEKKLIV 217
>P54536 Arginine transport system permease protein ArtQ [Bacillus
subtilis (strain 168)]
Length=219
Score = 92.4 bits (228), Expect = 2e-26
Identities = 61/217 (28%), Positives = 103/217 (47%), Gaps = 19/217 (9%)
Query 7 GVVTMIWTAVAAFLIAFFLGSLLGIIRTLPNKPLALIGDTYVEIFRNIPLIVQLFFWAFV 66
G+ + V + +I LG +L + + +P I D Y +FR PL++QL F
Sbjct 18 GLAITLKIVVVSAIIGLILGIVLSLCKISTFRPFIWIADFYTSVFRGTPLVLQLMIVYFG 77
Query 67 FPELLPASLSSGSGEVVAGGWWKNILNNHPAVIGVFALGLYTAARVSEHIRAGINTVSSG 126
P+LL + +W V AL L +AA VSE IRAGIN + G
Sbjct 78 LPQLLGFQIDQ---------FWA----------AVVALSLNSAAYVSEIIRAGINAIDKG 118
Query 127 QKFAASAMGFTTGQSYRYVILPVAYRTVWPTITSEAMNVFKNSAVLYALSVLNFFAYTKT 186
QK AA A+G G+ + ++LP A++ + P I +E + + K SA++ + + +
Sbjct 119 QKEAAVALGVPYGKMMKDLLLPQAFKNISPAIVNELITLTKESAIVTVIGLGDVMRRAYQ 178
Query 187 MREETSQDIIILILSTPVYLVITYTIKFIMAWIEKRM 223
T + LI++ +Y V+ + FI +E+++
Sbjct 179 AGAATYNYLEPLIIAGLIYYVLVLILTFIGKAVERKL 215
>Q4UKC4 Putative glutamine transport system permease protein GlnP
[Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)]
Length=218
Score = 92.0 bits (227), Expect = 3e-26
Identities = 61/219 (28%), Positives = 99/219 (45%), Gaps = 19/219 (9%)
Query 7 GVVTMIWTAVAAFLIAFFLGSLLGIIRTLPNKPLALIGDTYVEIFRNIPLIVQLFFWAFV 66
G + + +V A + +G LL I + N+ L L + Y IFR PL++QL F
Sbjct 18 GTLVTLKYSVIAVIFGLVIGMLLAICKVNKNRALRLFANFYTSIFRGTPLLIQLSIIYFA 77
Query 67 FPELLPASLSSGSGEVVAGGWWKNILNNHPAVIGVFALGLYTAARVSEHIRAGINTVSSG 126
P ++ S + G + L + A VSE IRAGIN V G
Sbjct 78 SPYIIGVKFSV-------------------FMAGAISFSLNSGAYVSEVIRAGINAVDKG 118
Query 127 QKFAASAMGFTTGQSYRYVILPVAYRTVWPTITSEAMNVFKNSAVLYALSVLNFFAYTKT 186
Q AA A+ + +ILP A + ++P++ +E +N+ K SA++ L ++ +
Sbjct 119 QFEAAVALAIPKFLIMKDIILPQAVKNIFPSLVNELVNLVKESAIISMLGEMDLMRRAQI 178
Query 187 MREETSQDIIILILSTPVYLVITYTIKFIMAWIEKRMAV 225
+ ET + ++ Y ++ I FI IEK+M V
Sbjct 179 VSIETYNYFFPMFIAACCYYILVMLISFIAKIIEKKMIV 217
>P35113 Nopaline transport system permease protein NocM [Agrobacterium
fabrum (strain C58 / ATCC 33970)]
Length=241
Score = 90.5 bits (223), Expect = 2e-25
Identities = 59/215 (27%), Positives = 105/215 (49%), Gaps = 10/215 (5%)
Query 6 SGVVTMIWTAVAAFLIAFFLGSLLGIIRTLPNKPLALIGDTYVEIFRNIPLIVQLFFWAF 65
+ V T + A + LI F + + ++R N+ ++ + YV I R+ PL+VQ+F
Sbjct 15 AAVPTTLTLAFISLLIGFVVSVPVALMRLSKNRIVSSLAYGYVYIIRSTPLLVQMF---- 70
Query 66 VFPELLPASLSSGSGEVVAGGWWKNILNNHPAVIGVFALGLYTAARVSEHIRAGINTVSS 125
L+ + G + G W + P + AL L TAA SE IR GI +VS
Sbjct 71 ----LIYYGSAQFRGVLSEVGLWSSF--REPWFCAILALALNTAAYTSEIIRGGIQSVSL 124
Query 126 GQKFAASAMGFTTGQSYRYVILPVAYRTVWPTITSEAMNVFKNSAVLYALSVLNFFAYTK 185
GQ AA A+G +T +R ++ P+A R P +E M + K++++ ++++ K
Sbjct 125 GQIEAARAVGMSTFLQFRRIVFPIAIRQALPAYGNEVMLIIKSTSLASTITIVEVTGLAK 184
Query 186 TMREETSQDIIILILSTPVYLVITYTIKFIMAWIE 220
+ T + + I++ +YL IT+ + ++ E
Sbjct 185 QIISATYSPVEVFIVAGAIYLFITFVVSRLVMLAE 219
>P54953 Probable amino-acid permease protein YxeN [Bacillus subtilis
(strain 168)]
Length=224
Score = 81.6 bits (200), Expect = 3e-22
Identities = 57/215 (27%), Positives = 94/215 (44%), Gaps = 17/215 (8%)
Query 12 IWTAVAAFLIAFFLGSLLGIIRTLPNKPLALIGDTYVEIFRNIPLIVQLFFWAFVFPELL 71
++ A+AA + A G +L +I L + Y+ FR +P +VQLF + P+L
Sbjct 24 LFMAIAAMIFAIIGGLILALITKNKIPVLHQLSKLYISFFRGVPTLVQLFLIYYGLPQLF 83
Query 72 PASLSSGSGEVVAGGWWKNILNNHPAVIGVFALGLYTAARVSEHIRAGINTVSSGQKFAA 131
P +S + A + L L AA ++E RA +N+V GQ A
Sbjct 84 P-EMSKMTALTAA----------------IIGLSLKNAAYLAEIFRAALNSVDDGQLEAC 126
Query 132 SAMGFTTGQSYRYVILPVAYRTVWPTITSEAMNVFKNSAVLYALSVLNFFAYTKTMREET 191
++G T Q+YR +ILP A R P + + + K +++ + L V+ FA K
Sbjct 127 LSVGMTKFQAYRRIILPQAIRNAIPATGNTFIGLLKETSLAFTLGVMEMFAQGKMYASGN 186
Query 192 SQDIIILILSTPVYLVITYTIKFIMAWIEKRMAVP 226
+ + VY V+T + E+ M+ P
Sbjct 187 LKYFETYLAVAIVYWVLTIIYSILQDLFERAMSKP 221
>P0AEU3 Histidine/lysine/arginine/ornithine transport system permease
protein HisM [Escherichia coli (strain K12)]
Length=238
Score = 76.3 bits (186), Expect = 3e-20
Identities = 59/218 (27%), Positives = 98/218 (45%), Gaps = 12/218 (6%)
Query 6 SGVVTMIWTAVAAFLIAFFLGSLLGIIRTLPNKPLALIGDTYVEIFRNIPLIVQLF-FWA 64
+GV +W + + +I L L I R NK + + IFR PL VQL F++
Sbjct 21 TGVAITLWLLILSVVIGGVLALFLAIGRVSSNKYIQFPIWLFTYIFRGTPLYVQLLVFYS 80
Query 65 FVFPELLPASLSSGSGEVVAGGWWKNILNNHPAVIGVFALGLYTAARVSEHIRAGINTVS 124
++ + E+V G + N V AL L T A +E I +V
Sbjct 81 GMY-----------TLEIVKGTEFLNAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVP 129
Query 125 SGQKFAASAMGFTTGQSYRYVILPVAYRTVWPTITSEAMNVFKNSAVLYALSVLNFFAYT 184
G+ AA A GF+T + YR +ILP A R P ++E + + ++A+ + +V +
Sbjct 130 HGEIEAARAYGFSTFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIA 189
Query 185 KTMREETSQDIIILILSTPVYLVITYTIKFIMAWIEKR 222
+ + T Q ++ +YL+I+Y + + EKR
Sbjct 190 RDINAATYQPFTAFGIAAVLYLIISYVLISLFRRAEKR 227
>O34606 Probable glutamine ABC transporter permease protein GlnP
[Bacillus subtilis (strain 168)]
Length=218
Score = 75.5 bits (184), Expect = 5e-20
Identities = 51/225 (23%), Positives = 107/225 (48%), Gaps = 23/225 (10%)
Query 1 LQMLGSGVVTMIWTAVAAFLIAFFLGSLLGIIRTLPNKPLALIGDTYVEIFRNIPLIVQL 60
L L G + ++ A + +++FF G + G +R L+ + VE RN+PL++ +
Sbjct 12 LAFLWDGFLVTLYVAFISIILSFFFGLIAGTLRYAKVPVLSQLIAVLVETIRNLPLLLII 71
Query 61 FFWAFVFPELLPASLSSGSGEVVAGGWWKNILNNHPAVIGVFALGLYTAARVSEHIRAGI 120
FF F PE+ E+ A + AL ++ +A +SE IR+G+
Sbjct 72 FFTFFALPEI------GIKLEITAAA--------------ITALTIFESAMLSEIIRSGL 111
Query 121 NTVSSGQKFAASAMGFTTGQSYRYVILPVAYRTVWPTITSEAMNVFKNSAVLYALSVLNF 180
++ GQ AA + G + Q+ ++++P A R + P I S+ +++ K++++ +++
Sbjct 112 KSIDKGQIEAARSSGLSYTQTLFFIVMPQALRRMVPPIVSQFISLLKDTSLAVVIALPEL 171
Query 181 FAYTKTMREET---SQDIIILILSTPVYLVITYTIKFIMAWIEKR 222
+ + ++ S I +L+ +Y + Y++ +E R
Sbjct 172 IHNAQIINGQSADGSYFFPIFLLAALMYFAVNYSLSLAARRLEVR 216
>P0AFT2 L-cystine transport system permease protein TcyL [Escherichia
coli (strain K12)]
Length=222
Score = 75.5 bits (184), Expect = 5e-20
Identities = 50/223 (22%), Positives = 97/223 (43%), Gaps = 20/223 (9%)
Query 1 LQMLGSGVVTMIWTAVAAFLIAFFLGSLLGIIRTLPNKPLALIGDTYVEIFRNIPLIVQL 60
L L G + ++ LG +L ++R P P+ + Y+ IFR PLI QL
Sbjct 12 LPFLLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIAQL 71
Query 61 FFWAFVFPELLPASLSSGSGEVVAGGWWKNILNNHPAVIGVFALGLYTAARVSEHIRAGI 120
F + P+ + P + L L TAA +E +RA I
Sbjct 72 FMIYYGLPQFG--------------------IELDPIPSAMIGLSLNTAAYAAETLRAAI 111
Query 121 NTVSSGQKFAASAMGFTTGQSYRYVILPVAYRTVWPTITSEAMNVFKNSAVLYALSVLNF 180
+++ GQ AA+++G T Q+ R ILP A R P +++ +++ K++++ + V
Sbjct 112 SSIDKGQWEAAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPEL 171
Query 181 FAYTKTMREETSQDIIILILSTPVYLVITYTIKFIMAWIEKRM 223
F + + T + + + ++ +Y ++ + + E ++
Sbjct 172 FRQAQLITSRTLEVFTMYLAASLIYWIMATVLSTLQNHFENQL 214
>Q52813 General L-amino acid transport system permease protein
AapQ [Rhizobium johnstonii (strain DSM 114642 / LMG 32736 /
3841)]
Length=400
Score = 77.4 bits (189), Expect = 6e-20
Identities = 65/218 (30%), Positives = 103/218 (47%), Gaps = 19/218 (9%)
Query 15 AVAAFLIAFFLGSLLGIIRTLPNKPLALIGDTYVEIFRNIPLIVQLFFWAFV---FP--- 68
AV L+ + S+ II +K A G + ++ I LIV L FV FP
Sbjct 192 AVGIALVIAIVASI--IIARWAHKRQAATGQPFHTVWTAIALIVGLPLLVFVVSGFPLTF 249
Query 69 ELLPASLSSGSGEVVAGGWWKNILNNHPAVIGVF-ALGLYTAARVSEHIRAGINTVSSGQ 127
++ A + +G V G P + +F AL YTA+ ++E +R GI V GQ
Sbjct 250 DVPVAGKFNLTGGSVVG----------PEFMSLFLALSFYTASFIAEIVRGGIRGVPKGQ 299
Query 128 KFAASAMGFTTGQSYRYVILPVAYRTVWPTITSEAMNVFKNSAVLYALSVLNFFAYTKTM 187
AA A+G R V++P A R + P +TS+ +N+ KNS++ A+ + A T+
Sbjct 300 SEAAGALGLHPSSVTRLVVVPQALRIIIPPLTSQYLNLTKNSSLAIAIGFSDLVAVGGTI 359
Query 188 REETSQDIIILILSTPVYLVITYTIKFIMAWIEKRMAV 225
++ Q I I+ + VYL ++ M W +MA+
Sbjct 360 LNQSGQAIEIVCIWGIVYLSLSILTSLFMNWFNAKMAL 397
Score = 47.4 bits (111), Expect = 9e-10
Identities = 24/66 (36%), Positives = 36/66 (55%), Gaps = 0/66 (0%)
Query 7 GVVTMIWTAVAAFLIAFFLGSLLGIIRTLPNKPLALIGDTYVEIFRNIPLIVQLFFWAFV 66
G++ + AV A +G L+GI R N +A + YVE+FRNIP ++ +FFW
Sbjct 95 GILNTLLVAVTGIFTATIIGFLIGIGRLSRNWLIAKLCTVYVEVFRNIPPLLVIFFWYLG 154
Query 67 FPELLP 72
+LP
Sbjct 155 VLSVLP 160
Score = 17.7 bits (34), Expect = 3.5
Identities = 8/21 (38%), Positives = 10/21 (48%), Gaps = 0/21 (0%)
Query 121 NTVSSGQKFAASAMGFTTGQS 141
+ +SG F GF GQS
Sbjct 58 SNTASGFGFLRGRAGFEIGQS 78
Score = 16.9 bits (32), Expect = 6.2
Identities = 6/18 (33%), Positives = 11/18 (61%), Gaps = 0/18 (0%)
Query 138 TGQSYRYVILPVAYRTVW 155
TG S+R + YR+++
Sbjct 14 TGWSFRSAMYDPKYRSIF 31
Lambda K H a alpha
0.328 0.140 0.428 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 667392
Database: adad0be6013a6ea6d59741c69cf07411.SwissProt.fasta
Posted date: May 20, 2024 5:46 PM
Number of letters in database: 4,232
Number of sequences in database: 18
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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