Comparative Genomics

ACIAD2111 / TrEMBL Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 5804ba37ac08f6d1906dcaa3ada729d0.TrEMBL.fasta
           14 sequences; 1,218 total letters



Query= ACIAD2111

Length=87
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q6FAJ4 Uncharacterized protein [Acinetobacter baylyi (strain ATCC...  183     2e-66
A0A7G2SC98 Uncharacterized protein [Acinetobacter sp]                 183     2e-66
A0A242U0V1 Uncharacterized protein [Acinetobacter pittii]             94.0    5e-31
N9F5U7 Uncharacterized protein [Acinetobacter bereziniae LMG 1003...  90.9    9e-30
N8X9T3 Uncharacterized protein [Acinetobacter bereziniae NIPH 3]      90.1    2e-29
R8YN60 Uncharacterized protein [Acinetobacter pittii ANC 4050]        89.4    4e-29
A0A7H2XVR4 Uncharacterized protein [Acinetobacter seifertii]          88.6    7e-29
A0A4Y3J7M6 Uncharacterized protein [Acinetobacter pittii]             87.8    1e-28
A0A6H2VGX9 Uncharacterized protein [Acinetobacter pittii]             87.4    2e-28
A0A7H2WKY4 Uncharacterized protein [Acinetobacter seifertii]          87.4    2e-28
A0A009MKT8 Uncharacterized protein [Acinetobacter sp. 1475718]        87.4    2e-28
A0A829S4X8 Uncharacterized protein [Acinetobacter sp. 225588]         87.4    2e-28
A0A2T5QQC9 Uncharacterized protein [Acinetobacter seifertii]          87.4    2e-28
A0A0R0RUW0 Uncharacterized protein [Acinetobacter pittii]             87.4    2e-28


>Q6FAJ4 Uncharacterized protein [Acinetobacter baylyi (strain 
ATCC 33305 / BD413 / ADP1)]
Length=86

 Score = 183 bits (464),  Expect = 2e-66
 Identities = 86/86 (100%), Positives = 86/86 (100%), Gaps = 0/86 (0%)

Query  1   MYNHEIVLQDKIFRRCSVVRVKDTIYDPSKNTFSEQWFWIYAENSEFFPFDLWEKLDHAE  60
           MYNHEIVLQDKIFRRCSVVRVKDTIYDPSKNTFSEQWFWIYAENSEFFPFDLWEKLDHAE
Sbjct  1   MYNHEIVLQDKIFRRCSVVRVKDTIYDPSKNTFSEQWFWIYAENSEFFPFDLWEKLDHAE  60

Query  61  INQIIQDERHFYKVIKVITKKRRRLI  86
           INQIIQDERHFYKVIKVITKKRRRLI
Sbjct  61  INQIIQDERHFYKVIKVITKKRRRLI  86


>A0A7G2SC98 Uncharacterized protein [Acinetobacter sp]
Length=86

 Score = 183 bits (464),  Expect = 2e-66
 Identities = 86/86 (100%), Positives = 86/86 (100%), Gaps = 0/86 (0%)

Query  1   MYNHEIVLQDKIFRRCSVVRVKDTIYDPSKNTFSEQWFWIYAENSEFFPFDLWEKLDHAE  60
           MYNHEIVLQDKIFRRCSVVRVKDTIYDPSKNTFSEQWFWIYAENSEFFPFDLWEKLDHAE
Sbjct  1   MYNHEIVLQDKIFRRCSVVRVKDTIYDPSKNTFSEQWFWIYAENSEFFPFDLWEKLDHAE  60

Query  61  INQIIQDERHFYKVIKVITKKRRRLI  86
           INQIIQDERHFYKVIKVITKKRRRLI
Sbjct  61  INQIIQDERHFYKVIKVITKKRRRLI  86


>A0A242U0V1 Uncharacterized protein [Acinetobacter pittii]
Length=87

 Score = 94.0 bits (232),  Expect = 5e-31
 Identities = 42/83 (51%), Positives = 59/83 (71%), Gaps = 0/83 (0%)

Query  1   MYNHEIVLQDKIFRRCSVVRVKDTIYDPSKNTFSEQWFWIYAENSEFFPFDLWEKLDHAE  60
           M NHEI+LQD+  ++  +V+V+D  +D S    S QW WI+  +SEFFPF+LWE+LDHA 
Sbjct  1   MENHEIILQDEHHKQFKIVKVQDVRFDKSTLNNSYQWLWIFDHSSEFFPFELWEQLDHAT  60

Query  61  INQIIQDERHFYKVIKVITKKRR  83
           INQ I+     YK+IK++TKK +
Sbjct  61  INQKIKLGNQVYKIIKILTKKTK  83


>N9F5U7 Uncharacterized protein [Acinetobacter bereziniae LMG 
1003 = CIP 70.12]
Length=88

 Score = 90.9 bits (224),  Expect = 9e-30
 Identities = 40/79 (51%), Positives = 58/79 (73%), Gaps = 0/79 (0%)

Query  4   HEIVLQDKIFRRCSVVRVKDTIYDPSKNTFSEQWFWIYAENSEFFPFDLWEKLDHAEINQ  63
           +EIVLQD+ F+   +V+VKDTIY+P     S  WFWIY++ SEFF FDLW++LDHAEI Q
Sbjct  6   YEIVLQDEKFQLHKLVKVKDTIYNPIHKNESFMWFWIYSDTSEFFYFDLWDELDHAEIGQ  65

Query  64  IIQDERHFYKVIKVITKKR  82
            I+ +++ +KV+ +   K+
Sbjct  66  YIRYKKNIFKVVSINNNKK  84


>N8X9T3 Uncharacterized protein [Acinetobacter bereziniae NIPH 
3]
Length=88

 Score = 90.1 bits (222),  Expect = 2e-29
 Identities = 40/79 (51%), Positives = 57/79 (72%), Gaps = 0/79 (0%)

Query  4   HEIVLQDKIFRRCSVVRVKDTIYDPSKNTFSEQWFWIYAENSEFFPFDLWEKLDHAEINQ  63
           +EIVLQD+ F+   +V+VKDTIY+P     S  WFWIY++ SEFF FDLW +LDHAEI Q
Sbjct  6   YEIVLQDEKFQLHKLVKVKDTIYNPIHKNESFMWFWIYSDTSEFFYFDLWNELDHAEIGQ  65

Query  64  IIQDERHFYKVIKVITKKR  82
            I+ +++ +KV+ +   K+
Sbjct  66  YIRYKKNIFKVVSINNNKK  84


>R8YN60 Uncharacterized protein [Acinetobacter pittii ANC 4050]
Length=87

 Score = 89.4 bits (220),  Expect = 4e-29
 Identities = 39/83 (47%), Positives = 59/83 (71%), Gaps = 0/83 (0%)

Query  1   MYNHEIVLQDKIFRRCSVVRVKDTIYDPSKNTFSEQWFWIYAENSEFFPFDLWEKLDHAE  60
           M NHEI+LQD+  ++  +V+V+D  +D S    S QW WI+  +SEFFPF+LW++LDHA 
Sbjct  1   MENHEIILQDEHHKQFKIVKVQDVRFDKSTLNNSYQWLWIFDHSSEFFPFELWDQLDHAT  60

Query  61  INQIIQDERHFYKVIKVITKKRR  83
           I+Q I+     +K+IK++TKK +
Sbjct  61  IHQKIKLGNQVFKIIKILTKKTK  83


>A0A7H2XVR4 Uncharacterized protein [Acinetobacter seifertii]
Length=87

 Score = 88.6 bits (218),  Expect = 7e-29
 Identities = 36/83 (43%), Positives = 60/83 (72%), Gaps = 0/83 (0%)

Query  1   MYNHEIVLQDKIFRRCSVVRVKDTIYDPSKNTFSEQWFWIYAENSEFFPFDLWEKLDHAE  60
           M NHEI+LQD+  ++  +V+V+D  +D +  T S QW W++  +SEFFPF+LW++LD+A 
Sbjct  1   MENHEIILQDEHHKQFKIVKVQDVRFDSNTLTHSYQWLWVFDHSSEFFPFELWDQLDNAT  60

Query  61  INQIIQDERHFYKVIKVITKKRR  83
           ++Q I+     +K+IK++TKK +
Sbjct  61  VHQKIRMNNQVFKIIKILTKKTK  83


>A0A4Y3J7M6 Uncharacterized protein [Acinetobacter pittii]
Length=87

 Score = 87.8 bits (216),  Expect = 1e-28
 Identities = 35/83 (42%), Positives = 60/83 (72%), Gaps = 0/83 (0%)

Query  1   MYNHEIVLQDKIFRRCSVVRVKDTIYDPSKNTFSEQWFWIYAENSEFFPFDLWEKLDHAE  60
           M NHE++LQD+  ++  +++V+D  +D +    S QW WI+  +SEFFPF+LW++LDHA 
Sbjct  1   MENHEVILQDEHHKQFKIIKVQDVRFDKNTLNNSYQWLWIFDHSSEFFPFELWDQLDHAT  60

Query  61  INQIIQDERHFYKVIKVITKKRR  83
           I+Q I+ +   +++IK++TKK +
Sbjct  61  IHQKIKLDNQVFRIIKILTKKTK  83


>A0A6H2VGX9 Uncharacterized protein [Acinetobacter pittii]
Length=87

 Score = 87.4 bits (215),  Expect = 2e-28
 Identities = 36/83 (43%), Positives = 59/83 (71%), Gaps = 0/83 (0%)

Query  1   MYNHEIVLQDKIFRRCSVVRVKDTIYDPSKNTFSEQWFWIYAENSEFFPFDLWEKLDHAE  60
           M NHE++LQD+  ++  +++V+D  +D S    S QW WI+  +SEFFPF+LW++LDHA 
Sbjct  1   MENHEVILQDEHHKQFKIIKVQDVRFDKSTLNNSYQWLWIFDHSSEFFPFELWDQLDHAT  60

Query  61  INQIIQDERHFYKVIKVITKKRR  83
           I+Q I+     +++IK++TKK +
Sbjct  61  IHQKIKLGNQVFRIIKILTKKTK  83


>A0A7H2WKY4 Uncharacterized protein [Acinetobacter seifertii]
Length=87

 Score = 87.4 bits (215),  Expect = 2e-28
 Identities = 36/83 (43%), Positives = 59/83 (71%), Gaps = 0/83 (0%)

Query  1   MYNHEIVLQDKIFRRCSVVRVKDTIYDPSKNTFSEQWFWIYAENSEFFPFDLWEKLDHAE  60
           M NHEI LQD+  ++  +V+V+D  +D +  T S QW W++  +SEFFPF+LW++LD+A 
Sbjct  1   MENHEITLQDEHHKQFKIVKVQDVRFDSNTLTHSYQWLWVFDHSSEFFPFELWDQLDNAT  60

Query  61  INQIIQDERHFYKVIKVITKKRR  83
           ++Q I+     +K+IK++TKK +
Sbjct  61  VHQKIRMNNEVFKIIKILTKKTK  83


>A0A009MKT8 Uncharacterized protein [Acinetobacter sp. 1475718]
Length=87

 Score = 87.4 bits (215),  Expect = 2e-28
 Identities = 36/83 (43%), Positives = 59/83 (71%), Gaps = 0/83 (0%)

Query  1   MYNHEIVLQDKIFRRCSVVRVKDTIYDPSKNTFSEQWFWIYAENSEFFPFDLWEKLDHAE  60
           M NHE++LQD+  ++  +V+V+D  +D +    S QW WI+  +SEFFPF+LW++LDHA 
Sbjct  1   MENHEVILQDEHHKQFKIVKVQDVRFDKNTLNNSYQWLWIFDHSSEFFPFELWDELDHAT  60

Query  61  INQIIQDERHFYKVIKVITKKRR  83
           ++Q I+     +K+IK++TKK +
Sbjct  61  VHQKIKLGNQVFKIIKILTKKTK  83


>A0A829S4X8 Uncharacterized protein [Acinetobacter sp. 225588]
Length=87

 Score = 87.4 bits (215),  Expect = 2e-28
 Identities = 36/83 (43%), Positives = 59/83 (71%), Gaps = 0/83 (0%)

Query  1   MYNHEIVLQDKIFRRCSVVRVKDTIYDPSKNTFSEQWFWIYAENSEFFPFDLWEKLDHAE  60
           M NHE++LQD+  ++  +V+V+D  +D +    S QW WI+  +SEFFPF+LW++LDHA 
Sbjct  1   MENHEVILQDEHHKQFKIVKVQDVRFDKNTLNNSYQWLWIFDHSSEFFPFELWDELDHAT  60

Query  61  INQIIQDERHFYKVIKVITKKRR  83
           ++Q I+     +K+IK++TKK +
Sbjct  61  VHQKIKLGNQVFKIIKILTKKTK  83


>A0A2T5QQC9 Uncharacterized protein [Acinetobacter seifertii]
Length=87

 Score = 87.4 bits (215),  Expect = 2e-28
 Identities = 36/83 (43%), Positives = 59/83 (71%), Gaps = 0/83 (0%)

Query  1   MYNHEIVLQDKIFRRCSVVRVKDTIYDPSKNTFSEQWFWIYAENSEFFPFDLWEKLDHAE  60
           M NHEI LQD+  ++  +V+V+D  +D +  T S QW W++  +SEFFPF+LW++LD+A 
Sbjct  1   MENHEITLQDEHHKQFKIVKVQDVRFDSNTLTHSYQWLWVFDHSSEFFPFELWDQLDNAT  60

Query  61  INQIIQDERHFYKVIKVITKKRR  83
           ++Q I+     +K+IK++TKK +
Sbjct  61  VHQKIRMNNQVFKIIKILTKKTK  83


>A0A0R0RUW0 Uncharacterized protein [Acinetobacter pittii]
Length=87

 Score = 87.4 bits (215),  Expect = 2e-28
 Identities = 38/83 (46%), Positives = 58/83 (70%), Gaps = 0/83 (0%)

Query  1   MYNHEIVLQDKIFRRCSVVRVKDTIYDPSKNTFSEQWFWIYAENSEFFPFDLWEKLDHAE  60
           M NHEI+LQD+  ++  +V+V+D  +D      S QW WI+  +SEFFPF+LW++LDHA 
Sbjct  1   MENHEIILQDEHHKQFKIVKVQDVRFDKRTLNNSYQWLWIFDHSSEFFPFELWDQLDHAT  60

Query  61  INQIIQDERHFYKVIKVITKKRR  83
           I+Q I+     +K+IK++TKK +
Sbjct  61  IHQKIKLGNQVFKIIKILTKKTK  83



Lambda      K        H        a         alpha
   0.333    0.144    0.472    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 55566


  Database: 5804ba37ac08f6d1906dcaa3ada729d0.TrEMBL.fasta
    Posted date:  Jun 1, 2024  9:50 PM
  Number of letters in database: 1,218
  Number of sequences in database:  14



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40