BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: b9f31ddf269067f4d0daab37281bd5f0.SwissProt.fasta
           2 sequences; 806 total letters



Query= ACIAD2137

Length=242
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q5KW02 S-adenosylmethionine synthase [Geobacillus kaustophilus (s...  37.7    3e-07
C5D6E9 S-adenosylmethionine synthase [Geobacillus sp. (strain WCH...  35.4    2e-06


>Q5KW02 S-adenosylmethionine synthase [Geobacillus kaustophilus 
(strain HTA426)]
Length=403

 Score = 37.7 bits (86),  Expect = 3e-07
 Identities = 30/98 (31%), Positives = 45/98 (46%), Gaps = 7/98 (7%)

Query  16   EISELVQSRPDKVKQSIERLAEKGVITLPPMVETSFLNSIGRKQNTTVYKFTGEQGKRDS  75
            E  EL+        +   RLAE     + P     +L   G+ Q T  Y   G+  + D+
Sbjct  143  ETEELMPMPISLAHRLARRLAEVRKTDVLP-----YLRPDGKTQVTIEYDENGKPVRVDT  197

Query  76   IIVVAQLCPEFTARLVDRWQELEAQVAKPVDPMQALSD  113
            I+V AQ  PE T   + R  +++ QV KPV P + L +
Sbjct  198  IVVSAQHHPEITQEQIQR--DIKEQVIKPVVPAELLDE  233


 Score = 26.9 bits (58),  Expect = 8e-04
 Identities = 17/69 (25%), Positives = 30/69 (43%), Gaps = 2/69 (3%)

Query  129  VELEHKVEVMQPTIDAFDRIATANGS--LCLTDAAKALQMRPKDFISFLSQKQWIYKRTG  186
            V+L + + V +P   + D   T   S  + +        +RP   I  L  ++ IYK+T 
Sbjct  311  VQLAYAIGVARPVSISIDTFGTGKVSEDILIEVVRNNFDLRPAGIIKMLDLRRPIYKQTA  370

Query  187  SAHYVGYQD  195
            +  + G  D
Sbjct  371  AYGHFGRTD  379


>C5D6E9 S-adenosylmethionine synthase [Geobacillus sp. (strain 
WCH70)]
Length=403

 Score = 35.4 bits (80),  Expect = 2e-06
 Identities = 19/63 (30%), Positives = 34/63 (54%), Gaps = 2/63 (3%)

Query  51   FLNSIGRKQNTTVYKFTGEQGKRDSIIVVAQLCPEFTARLVDRWQELEAQVAKPVDPMQA  110
            +L   G+ Q T  Y   G+  + D+I+V AQ  PE T   ++R  +++  V KP+ P + 
Sbjct  173  YLRPDGKTQVTVEYDENGKPVRIDTIVVSAQHHPEITQEQIER--DIKEHVIKPIVPAEL  230

Query  111  LSD  113
            + +
Sbjct  231  IDE  233


 Score = 26.9 bits (58),  Expect = 8e-04
 Identities = 17/69 (25%), Positives = 30/69 (43%), Gaps = 2/69 (3%)

Query  129  VELEHKVEVMQPTIDAFDRIATANGS--LCLTDAAKALQMRPKDFISFLSQKQWIYKRTG  186
            V+L + + V +P   + D   T   S  + +        +RP   I  L  ++ IYK+T 
Sbjct  311  VQLAYAIGVARPVSISIDTFGTGKVSEDILIEVVRNNFDLRPAGIIKMLDLRRPIYKQTA  370

Query  187  SAHYVGYQD  195
            +  + G  D
Sbjct  371  AYGHFGRTD  379



Lambda      K        H        a         alpha
   0.319    0.133    0.378    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 155820


  Database: b9f31ddf269067f4d0daab37281bd5f0.SwissProt.fasta
    Posted date:  Jun 1, 2024  11:16 PM
  Number of letters in database: 806
  Number of sequences in database:  2



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40