Comparative Genomics

ACIAD2178 / TrEMBL Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: c9c06b7443ce0a89e049861b3c6ef7ad.TrEMBL.fasta
           9 sequences; 1,401 total letters



Query= ACIAD2178

Length=156
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

A0A7G2SE29 DUF559 domain-containing protein [Acinetobacter sp]        322     3e-119
Q6FAD6 DUF559 domain-containing protein [Acinetobacter baylyi (st...  322     3e-119
A0A1P8EF57 DUF559 domain-containing protein [Acinetobacter soli]      271     5e-99 
A0A1P8EFR2 DUF559 domain-containing protein [Acinetobacter soli]      259     3e-94 
A0A0P0IRI6 DUF559 domain-containing protein [Acinetobacter phage ...  256     4e-93 
A0A241ZAQ7 DUF559 domain-containing protein [Acinetobacter bauman...  254     2e-92 
A0A3D2SR00 DUF559 domain-containing protein [Acinetobacter ursingii]  254     3e-92 
A0A072CQT9 DUF559 domain-containing protein [Acinetobacter sp. ETR1]  245     1e-88 
N8YLG3 DUF559 domain-containing protein [Acinetobacter bereziniae...  238     5e-86 


>A0A7G2SE29 DUF559 domain-containing protein [Acinetobacter sp]
Length=155

 Score = 322 bits (826),  Expect = 3e-119
 Identities = 155/155 (100%), Positives = 155/155 (100%), Gaps = 0/155 (0%)

Query  1    MEIDTYKSKTKKAPLKTKPRTRPLPKAKISYKEAEEDFEKSLQILGIKYEKKFQFISTKH  60
            MEIDTYKSKTKKAPLKTKPRTRPLPKAKISYKEAEEDFEKSLQILGIKYEKKFQFISTKH
Sbjct  1    MEIDTYKSKTKKAPLKTKPRTRPLPKAKISYKEAEEDFEKSLQILGIKYEKKFQFISTKH  60

Query  61   WRFDFHLIEHKILVEISGGPWSGGRKGKLKNKAWSIDRYDVAADMGYTVVRIESAPIYKI  120
            WRFDFHLIEHKILVEISGGPWSGGRKGKLKNKAWSIDRYDVAADMGYTVVRIESAPIYKI
Sbjct  61   WRFDFHLIEHKILVEISGGPWSGGRKGKLKNKAWSIDRYDVAADMGYTVVRIESAPIYKI  120

Query  121  HEDGPLQIESNFGFSWLKRLKRQTPNGPDQTISPD  155
            HEDGPLQIESNFGFSWLKRLKRQTPNGPDQTISPD
Sbjct  121  HEDGPLQIESNFGFSWLKRLKRQTPNGPDQTISPD  155


>Q6FAD6 DUF559 domain-containing protein [Acinetobacter baylyi 
(strain ATCC 33305 / BD413 / ADP1)]
Length=155

 Score = 322 bits (826),  Expect = 3e-119
 Identities = 155/155 (100%), Positives = 155/155 (100%), Gaps = 0/155 (0%)

Query  1    MEIDTYKSKTKKAPLKTKPRTRPLPKAKISYKEAEEDFEKSLQILGIKYEKKFQFISTKH  60
            MEIDTYKSKTKKAPLKTKPRTRPLPKAKISYKEAEEDFEKSLQILGIKYEKKFQFISTKH
Sbjct  1    MEIDTYKSKTKKAPLKTKPRTRPLPKAKISYKEAEEDFEKSLQILGIKYEKKFQFISTKH  60

Query  61   WRFDFHLIEHKILVEISGGPWSGGRKGKLKNKAWSIDRYDVAADMGYTVVRIESAPIYKI  120
            WRFDFHLIEHKILVEISGGPWSGGRKGKLKNKAWSIDRYDVAADMGYTVVRIESAPIYKI
Sbjct  61   WRFDFHLIEHKILVEISGGPWSGGRKGKLKNKAWSIDRYDVAADMGYTVVRIESAPIYKI  120

Query  121  HEDGPLQIESNFGFSWLKRLKRQTPNGPDQTISPD  155
            HEDGPLQIESNFGFSWLKRLKRQTPNGPDQTISPD
Sbjct  121  HEDGPLQIESNFGFSWLKRLKRQTPNGPDQTISPD  155


>A0A1P8EF57 DUF559 domain-containing protein [Acinetobacter soli]
Length=155

 Score = 271 bits (693),  Expect = 5e-99
 Identities = 131/155 (85%), Positives = 140/155 (90%), Gaps = 0/155 (0%)

Query  1    MEIDTYKSKTKKAPLKTKPRTRPLPKAKISYKEAEEDFEKSLQILGIKYEKKFQFISTKH  60
            MEID YKSKTKKAPLKTKPRTRPLPKAKISY+EAEEDFEK+L ILGIKYEKKFQFISTKH
Sbjct  1    MEIDIYKSKTKKAPLKTKPRTRPLPKAKISYQEAEEDFEKALNILGIKYEKKFQFISTKH  60

Query  61   WRFDFHLIEHKILVEISGGPWSGGRKGKLKNKAWSIDRYDVAADMGYTVVRIESAPIYKI  120
            WRFDFHLIEHKILVEISGGPWSGGR GKL  KAWS++RYD A ++GYTVVRIESA  YKI
Sbjct  61   WRFDFHLIEHKILVEISGGPWSGGRGGKLATKAWSMERYDCAYELGYTVVRIESASRYKI  120

Query  121  HEDGPLQIESNFGFSWLKRLKRQTPNGPDQTISPD  155
             + GPLQI+SNF  SWLKRL+ QT NGPDQTISPD
Sbjct  121  DDSGPLQIKSNFAVSWLKRLRGQTFNGPDQTISPD  155


>A0A1P8EFR2 DUF559 domain-containing protein [Acinetobacter soli]
Length=155

 Score = 259 bits (662),  Expect = 3e-94
 Identities = 125/155 (81%), Positives = 136/155 (88%), Gaps = 0/155 (0%)

Query  1    MEIDTYKSKTKKAPLKTKPRTRPLPKAKISYKEAEEDFEKSLQILGIKYEKKFQFISTKH  60
            MEI+ YKSKT+K P K KPRTRPLPKAKISY+EAEEDFEK+L ILGIKYEKKFQF+STKH
Sbjct  1    MEIEIYKSKTRKVPYKPKPRTRPLPKAKISYEEAEEDFEKALNILGIKYEKKFQFLSTKH  60

Query  61   WRFDFHLIEHKILVEISGGPWSGGRKGKLKNKAWSIDRYDVAADMGYTVVRIESAPIYKI  120
            WRFDFHLIEHKILVEISGGPWSGGR GKL  KAWS++RYD A ++GYTVVRIESA  YKI
Sbjct  61   WRFDFHLIEHKILVEISGGPWSGGRGGKLATKAWSMERYDCAYELGYTVVRIESANRYKI  120

Query  121  HEDGPLQIESNFGFSWLKRLKRQTPNGPDQTISPD  155
             + GPLQI+SNF  SWLKRLK QT NGP QTISPD
Sbjct  121  DDSGPLQIKSNFAVSWLKRLKGQTFNGPIQTISPD  155


>A0A0P0IRI6 DUF559 domain-containing protein [Acinetobacter phage 
Ab105-2phi]
Length=155

 Score = 256 bits (654),  Expect = 4e-93
 Identities = 119/153 (78%), Positives = 138/153 (90%), Gaps = 0/153 (0%)

Query  1    MEIDTYKSKTKKAPLKTKPRTRPLPKAKISYKEAEEDFEKSLQILGIKYEKKFQFISTKH  60
            MEI+ YK+KTKKAPLK KPR++PLPKAK+SY+EAEEDFEK+L IL IKYEKKFQF+STKH
Sbjct  1    MEINIYKAKTKKAPLKNKPRSKPLPKAKLSYEEAEEDFEKALNILDIKYEKKFQFLSTKH  60

Query  61   WRFDFHLIEHKILVEISGGPWSGGRKGKLKNKAWSIDRYDVAADMGYTVVRIESAPIYKI  120
            WRFDFHLIEH+ILVEI+GGPWSGGRKG+LKNKAWS+DRYDVA  MGYTV+RIE+AP +KI
Sbjct  61   WRFDFHLIEHRILVEIAGGPWSGGRKGRLKNKAWSLDRYDVAEKMGYTVIRIEAAPRFKI  120

Query  121  HEDGPLQIESNFGFSWLKRLKRQTPNGPDQTIS  153
            +E GPLQI+++F   WLK LKRQ  NG DQTIS
Sbjct  121  NESGPLQIQAHFASQWLKNLKRQIFNGSDQTIS  153


>A0A241ZAQ7 DUF559 domain-containing protein [Acinetobacter baumannii]
Length=155

 Score = 254 bits (650),  Expect = 2e-92
 Identities = 120/153 (78%), Positives = 136/153 (89%), Gaps = 0/153 (0%)

Query  1    MEIDTYKSKTKKAPLKTKPRTRPLPKAKISYKEAEEDFEKSLQILGIKYEKKFQFISTKH  60
            MEI+ YK+KTKKAPLK KPR++PLPKAK+SY+EAEEDFEK+L IL IKYEKKFQF+STKH
Sbjct  1    MEINIYKAKTKKAPLKNKPRSKPLPKAKLSYEEAEEDFEKALNILDIKYEKKFQFLSTKH  60

Query  61   WRFDFHLIEHKILVEISGGPWSGGRKGKLKNKAWSIDRYDVAADMGYTVVRIESAPIYKI  120
            WRFDFHLIEHKILVEISGGPWSGGRKGKL  KAWS+DRYDVA  MGYTVVR+E+AP +KI
Sbjct  61   WRFDFHLIEHKILVEISGGPWSGGRKGKLATKAWSMDRYDVAESMGYTVVRLEAAPRFKI  120

Query  121  HEDGPLQIESNFGFSWLKRLKRQTPNGPDQTIS  153
            +E GPLQI+++F   WLK LKRQ  NG DQTIS
Sbjct  121  NESGPLQIQAHFASEWLKNLKRQIFNGSDQTIS  153


>A0A3D2SR00 DUF559 domain-containing protein [Acinetobacter ursingii]
Length=155

 Score = 254 bits (648),  Expect = 3e-92
 Identities = 122/155 (79%), Positives = 133/155 (86%), Gaps = 0/155 (0%)

Query  1    MEIDTYKSKTKKAPLKTKPRTRPLPKAKISYKEAEEDFEKSLQILGIKYEKKFQFISTKH  60
            M++D YK  T K P K KPRTRPLPKAKISY+EAEEDFEK+L ILGIKYEKKFQF+STKH
Sbjct  1    MDVDAYKRATNKKPYKPKPRTRPLPKAKISYEEAEEDFEKALNILGIKYEKKFQFLSTKH  60

Query  61   WRFDFHLIEHKILVEISGGPWSGGRKGKLKNKAWSIDRYDVAADMGYTVVRIESAPIYKI  120
            WRFDFHLIEH+ILVEISGGPWSGGR GKL  KAWS++RYD A ++GYTVVRIESA  YKI
Sbjct  61   WRFDFHLIEHRILVEISGGPWSGGRGGKLATKAWSMERYDRAYELGYTVVRIESANKYKI  120

Query  121  HEDGPLQIESNFGFSWLKRLKRQTPNGPDQTISPD  155
             + GPLQIESNF  SWLKRLK QT NGP QTISPD
Sbjct  121  DDSGPLQIESNFAVSWLKRLKGQTFNGPIQTISPD  155


>A0A072CQT9 DUF559 domain-containing protein [Acinetobacter sp. 
ETR1]
Length=158

 Score = 245 bits (625),  Expect = 1e-88
 Identities = 119/155 (77%), Positives = 131/155 (85%), Gaps = 0/155 (0%)

Query  1    MEIDTYKSKTKKAPLKTKPRTRPLPKAKISYKEAEEDFEKSLQILGIKYEKKFQFISTKH  60
            MEI+ Y S TKK P+KTKPRTRPLPKA  +Y EA +DFE+SL +  IKYEK FQF STKH
Sbjct  1    MEINQYTSLTKKQPIKTKPRTRPLPKAIEAYLEAFKDFEQSLNVFQIKYEKLFQFESTKH  60

Query  61   WRFDFHLIEHKILVEISGGPWSGGRKGKLKNKAWSIDRYDVAADMGYTVVRIESAPIYKI  120
            WRFDFHLI+H+ILVEISGGPWSGGRKGKLK+KAWS+DRYDVAADMGYTVVRIESAP YKI
Sbjct  61   WRFDFHLIKHRILVEISGGPWSGGRKGKLKDKAWSMDRYDVAADMGYTVVRIESAPRYKI  120

Query  121  HEDGPLQIESNFGFSWLKRLKRQTPNGPDQTISPD  155
             EDGPLQ+E+NF   WLK LKR   NG DQTIS D
Sbjct  121  QEDGPLQVETNFTSQWLKNLKRHIFNGTDQTISTD  155


>N8YLG3 DUF559 domain-containing protein [Acinetobacter bereziniae 
NIPH 3]
Length=158

 Score = 238 bits (608),  Expect = 5e-86
 Identities = 118/155 (76%), Positives = 129/155 (83%), Gaps = 0/155 (0%)

Query  1    MEIDTYKSKTKKAPLKTKPRTRPLPKAKISYKEAEEDFEKSLQILGIKYEKKFQFISTKH  60
            MEI+ Y S TKK  +KTKPRTRPLPKAK +Y EA EDFE+SL +L IKYEK FQF STKH
Sbjct  4    MEINQYTSLTKKQIVKTKPRTRPLPKAKKAYLEAFEDFEQSLNVLKIKYEKLFQFESTKH  63

Query  61   WRFDFHLIEHKILVEISGGPWSGGRKGKLKNKAWSIDRYDVAADMGYTVVRIESAPIYKI  120
            WRFDF LIE +ILVEISGGPWSGGRKGKLK+KAWS+DRYDVAADMGYT+VRIESAP YKI
Sbjct  64   WRFDFLLIERRILVEISGGPWSGGRKGKLKDKAWSMDRYDVAADMGYTIVRIESAPRYKI  123

Query  121  HEDGPLQIESNFGFSWLKRLKRQTPNGPDQTISPD  155
             E GP+Q+ESNF   WLK LKR   NG DQTIS D
Sbjct  124  QEYGPMQVESNFSSQWLKNLKRHIFNGTDQTISTD  158



Lambda      K        H        a         alpha
   0.320    0.138    0.424    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 140250


  Database: c9c06b7443ce0a89e049861b3c6ef7ad.TrEMBL.fasta
    Posted date:  May 12, 2024  9:41 PM
  Number of letters in database: 1,401
  Number of sequences in database:  9



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40