BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 8b8a3634b707d45138ca1fb9e80bfe43.SwissProt.fasta
           2 sequences; 1,405 total letters



Query= ACIAD2201

Length=666
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q9HZX3 Protein-glutamine gamma-glutamyltransferase [Pseudomonas a...  272     8e-86
P94476 Uncharacterized protein YebA [Bacillus subtilis (strain 168)]  67.4    2e-15


>Q9HZX3 Protein-glutamine gamma-glutamyltransferase [Pseudomonas 
aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / 
JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)]
Length=668

 Score = 272 bits (695),  Expect = 8e-86
 Identities = 179/599 (30%), Positives = 293/599 (49%), Gaps = 30/599 (5%)

Query  2    IASLYFLLIPLLGSIWIAQWTYMPLTLNVVWGGILFLIGWRHRQKHFTAVHKI--ILICF  59
            +A ++ L+  +L  + +    YMPL +  +W G      WR +     A +    + +  
Sbjct  7    VALVWLLVAQVL--VILPHLAYMPLWIAAMWLGCA---AWRVQVFRMRAGYPRAWVKLAL  61

Query  60   VLFSLILIYLNFKSFLGVDAGVALLTTCLFAKSLESKNTRDFLIIFNFGLFVSASLFLHS  119
             L +   ++L+  S +G+DAG  LL      K +E K  RD L++   G F     +L  
Sbjct  62   ALLAGAGVWLSRGSLVGLDAGAVLLIAAFILKLVEMKTRRDALVLVFLGFFAVVVGYLFD  121

Query  120  QSFLMLCMVLICLVFCFIGLYRIQTKNFKSEKTDQISLQHDIRHVLKLLMVAIPFFITLF  179
              FL     L+ +      L  +Q   F S     + L         LL+ A+P  + LF
Sbjct  122  DGFLAALYSLLPVTALLAALIGLQQSAFASRPWPTLRLAGG------LLLQALPLMLLLF  175

Query  180  IFFPRLPPLWHVPISANHAITGMSDQMSPGDIAQLSQSSALAFRVIGDLSQLPQPDHMYW  239
            +FFPRL PLW +P+  N  +TG+S+ M+PGDIA+L +S+ LAFRV  +   LP  + +YW
Sbjct  176  LFFPRLGPLWSLPMPGNKGVTGLSESMAPGDIAELGRSAELAFRVRFE-GALPPREQLYW  234

Query  240  RAMILDNYDGRVWTRSSHNQRPVDYHV----PEIAGVKYQYLPATKDQPWIMSLESSISD  295
            RA+ ++ +DGR W ++         H     PE+   +Y  +     QPW+ +L+ + +D
Sbjct  235  RALTMERFDGRRWAQAPQWSGEDALHWQKRGPEL---RYDVIMQPSSQPWLFALDVAQTD  291

Query  296  DTAYQTYIDGSIKRKHLVQNN--QPVTLYWLRFQKSIVDTNKQDLQQSLQINTGQEPKTQ  353
             T  +   D  ++R+  V+      V+ +    ++S +D   +   ++LQ+     P+ +
Sbjct  292  QTDTRLMSDFHLQRRQPVEQRLFYRVSSWPQALRESSIDPRTR--WRNLQLPMHGNPRAR  349

Query  354  ALAQQILKQSDADPARYVKNILDWYRQQDFIYTLSPEQLNGNRTDQFLFQTRNGFCEHYA  413
            ALA + L+Q+ A P   V  +L  +  + F YTL P     +  D FLF TR+GFC HYA
Sbjct  350  ALADE-LRQAHAQPQALVAALLQRFNHEPFAYTLKPPATGADGVDDFLFDTRSGFCAHYA  408

Query  414  SSFVLLMRYAGIPARVVIGYQGGQLAPDAQSLEVRQLDAHAWAEV-LIDDSWHRIDPTAA  472
             +   ++R AGIPARVV GYQGG+L P    L V Q DAHAW E    +  W  +DPT  
Sbjct  409  GAMAFVLRAAGIPARVVAGYQGGELNPAGNYLLVHQFDAHAWVEYWQPEQGWLSVDPTYQ  468

Query  473  IAPARLEHGMQYYLQEDRRIWGSEQHLFWKQQNFHLIQSFRVWSDYLQYQWQSKVIGYNV  532
            +AP R+E G++  L  D            + +    +   R+  D L Y WQ  V+ Y  
Sbjct  469  VAPERIEQGLEQALAGDSEYLADAPLSPLRYRGLPWLNDMRLAWDSLNYGWQRWVLAYQG  528

Query  533  DQQKSFFSKL--GIRSVYSAIVIMLLSICGLVIVYGIYVAYKRRGQSSFIEYQISRFQR  589
            +QQ +F  +   G+      +++   +I  + ++  +++    +G+      Q+ RF+R
Sbjct  529  EQQGAFLQRWFGGLDPTRLGLLLGAAAILSVGLL-ALFLLKPWQGRGDLRSRQLRRFER  586


>P94476 Uncharacterized protein YebA [Bacillus subtilis (strain 
168)]
Length=737

 Score = 67.4 bits (163),  Expect = 2e-15
 Identities = 65/272 (24%), Positives = 115/272 (42%), Gaps = 27/272 (10%)

Query  371  VKNILDWYRQQDFIYTLSPEQLNGNR---TDQFLFQTRNGFCEHYASSFVLLMRYAGIPA  427
            VK + D+     F Y      +  N     DQFLF+T+ G+C++++S+ V+L+R AGIPA
Sbjct  443  VKAVEDYLGSNAFTYETENVTIPKNDEDYVDQFLFETKMGYCDNFSSAMVVLLRSAGIPA  502

Query  428  RVVIGYQGGQLA----PDAQSLEVRQLDAHAWAEVLI-DDSWHRIDPTAAIA-PARLEHG  481
            R V GY  G+       +    EV   +AH+W EV   +  W   +PT     PA+    
Sbjct  503  RWVKGYTSGEYKEAGNKNGSIYEVTNNNAHSWVEVYFPEQGWVTFEPTKGFTNPAQ----  558

Query  482  MQYYLQEDRRIWGSEQHLFWK------QQNFHLIQSFRVWSDYLQYQWQSKVIGYNVDQQ  535
               +   D +  GS+     K      ++     Q      +  +     K    + +  
Sbjct  559  ---FTSSDTKDSGSDSSSSPKKAKEKQKEEKKQPQKEEKQKEKREPAVSKKPSASHTNAG  615

Query  536  KSFFSKLGIRSVYSAIVIMLLSICGLVI-VYGIYVAYKRRGQSSFIEYQISRFQRKMSPS  594
               ++ L + +V     ++L     L I V+ +    +R  Q +F E   +  ++     
Sbjct  616  AGLYAALAVLAVLLVAAVLLYVFRSLWIPVFAVRKLKRRSDQHAFFEAYGALLKQLKRKG  675

Query  595  MKKQKSETFKVWMLRLSAHANNKQPFTDVTKL  626
            + K+ SET + +  R+    + K    D++KL
Sbjct  676  LPKRDSETLRDYAKRI----DEKYDIEDMSKL  703


 Score = 17.7 bits (34),  Expect = 3.9
 Identities = 8/17 (47%), Positives = 11/17 (65%), Gaps = 0/17 (0%)

Query  356  AQQILKQSDADPARYVK  372
            A  +L +S   PAR+VK
Sbjct  490  AMVVLLRSAGIPARWVK  506



Lambda      K        H        a         alpha
   0.327    0.139    0.435    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 819174


  Database: 8b8a3634b707d45138ca1fb9e80bfe43.SwissProt.fasta
    Posted date:  May 20, 2024  1:51 PM
  Number of letters in database: 1,405
  Number of sequences in database:  2



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40